Rmu_sc0002296.1_g000011

f-box protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002296.1
Physical Location & Seq
Reverse (-)
62011 .. 65420
3410 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002296.1_g000011.1.cds

Sequence Viewer

Length: 1659 bp
atggatttgccttcttcagatatagtgactgaagaccaccataccaaaagaaaagagaaacgaaggaggactgacgacgtaaacaaagaaagaaagagacagagaacgtcgacggtcgaccacctgactgaagagaacaagattaaaaggactgaaggaagtaatgacgcccacccgatgaaacgaaaagataaaagaacaagaatgcctgacaacgacctgaaaaagggaaataagagacaaagaaccaaagagaaaaagtttgatcaggttcacacagccatcaagcgcctcatgtccgccgtcgacggtggtagtaggcctgaagatcttgtaaggctgtccgatggcaaccctgtggtggtggagatcagtgagcccaagtgcgttgagtatttgaacaagatacatgaccaaattgttgagctaaaacagaatagtatcaaaaaaagaaaagcaaactggtctgggcttcccactgagcttctagagtccatcttgaaaaagcttataccttctgaatttgacatccttggctttagacatatcctatattttaaagccgtttgtcattcctggagaaccgctgcaaaatcttgtagctcttacgttccgttgcctcgaactccgtgtcttttgcatcatgaaaacaactcctccctttttgatcccataggaaagaaggtgcacaagatcaggaacatctgtgactttttttctgaagccacctgggtcggttcatcatatgggtggattgtcatgttttaccaagacgaagatttgaaagaatcaatggcacatgtttttaacccgatttcaagagccagcattccgatcccaggcacaaagacccttcctaactacaaccttggagaccaaatttctaaagctattgtttcgtctaatccctctagctacaaccttggagatcaaattcctaaaggtattgtttcgtccaatcgatctagcaacaagaactattttgtggtagtggaatatgatggaaatctagcatactataagcttggagacggagacaaatcatggagaaagttgggtgataataagggttacaatcccaaatgtattatgtttcacgatgaccaattaattgcattgtcccagaggttaactgagatttggaacttcaaggaataccctcctcaacaacctcagcgtattgaagaatctcctccctacagatgggttgaagataccaatttggttgaagatacttatttggtggagtcactgacgggtgatattttacgtgtgggaagaagtatgcaaaaagggctgggcgtccggacccgaaagacagaggacctgacccgaactgagggaaaaagctcgaaccggccccgaaagcccgaaccgacccgaaactgtagcagttgccacatgtcagtccatgattgggtctcgaaccctctctttgtcgtcgatactccctcagcctccctctctttgccgtcgataccgtcgattgctctttgccgtctcgttctcgatctcagattctcagccccaaatctcagtgactcagtctcagccctaaatctcagtctcaacctctctctccagtctcgttctcgatctcctgtctcaacctctctctccagtctcgaaaatcaaactcctcctccaatgaagctttag

Protein Analysis

552

Amino Acids

62.87

Weight (kDa)

9.33

Isoelectric Point (pI)

55.08

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 3 cut(s) 110, 117, 306
AccIII TCCGGA 1 cut(s) 1305
AciI CCGC 2 cut(s) 300, 585
AclWI GGATC 2 cut(s) 662, 829
AcsI RAATTY 3 cut(s) 521, 879, 933
AcuI CTGAAG 5 cut(s) 51, 150, 174, 345, 741
AcyI GRCGYC 2 cut(s) 168, 1302
AfiI CCNNNNNNNGG 6 cut(s) 226, 361, 839, 1203, 1339, 1417
AflIII ACRYGT 3 cut(s) 799, 1270, 1401
AgsI TTSAA 8 cut(s) 400, 502, 784, 819, 1150, 1184, 1211, 1229
AjnI CCWGG 3 cut(s) 575, 728, 838
AluBI AGCT 9 cut(s) 427, 484, 508, 603, 890, 915, 1024, 1350, 1654
AluI AGCT 9 cut(s) 427, 484, 508, 603, 890, 915, 1024, 1350, 1654
Alw21I GWGCWC 1 cut(s) 690
Alw44I GTGCAC 1 cut(s) 686
AlwI GGATC 2 cut(s) 662, 829
Aor13HI TCCGGA 1 cut(s) 1305
AoxI GGCC 2 cut(s) 320, 1358
ApaLI GTGCAC 1 cut(s) 686
ApeKI GCWGC 1 cut(s) 587
ApoI RAATTY 3 cut(s) 521, 879, 933
ArsI GACNNNNNNTTYG 2 cut(s) 616, 648
AseI ATTAAT 1 cut(s) 1109
AspLEI GCGC 1 cut(s) 291
AspS9I GGNCC 3 cut(s) 1308, 1324, 1359
AsuHPI GGTGA 2 cut(s) 1070, 1271
AvaII GGWCC 2 cut(s) 1308, 1324
BaeGI GKGCMC 1 cut(s) 690
BanII GRGCYC 1 cut(s) 381
BbsI GAAGAC 1 cut(s) 39
Bbv12I GWGCWC 1 cut(s) 690
BbvCI CCTCAGC 2 cut(s) 1173, 1453
BbvI GCAGC 1 cut(s) 574
BccI CCATC 5 cut(s) 290, 341, 503, 995, 1197
BceAI ACGGC 4 cut(s) 287, 548, 1456, 1482
BciT130I CCWGG 3 cut(s) 577, 730, 840
BclI TGATCA 1 cut(s) 265
BfaI CTAG 4 cut(s) 488, 912, 966, 1010
BfmI CTRYAG 2 cut(s) 1198, 1387
BfoI RGCGCY 1 cut(s) 292
BglII AGATCT 1 cut(s) 328
BisI GCNGC 1 cut(s) 588
BlsI GCNGC 1 cut(s) 589
Bme1390I CCNGG 3 cut(s) 577, 730, 840
Bme18I GGWCC 2 cut(s) 1308, 1324
BmgT120I GGNCC 3 cut(s) 1308, 1324, 1359
BmiI GGNNCC 2 cut(s) 1310, 1361
BmrFI CCNGG 3 cut(s) 577, 730, 840
BmsI GCATC 1 cut(s) 649
BpiI GAAGAC 1 cut(s) 39
BpmI CTGGAG 3 cut(s) 598, 1565, 1603
Bpu10I CCTNAGC 2 cut(s) 1173, 1453
Bsa29I ATCGAT 1 cut(s) 961
BsaAI YACGTR 1 cut(s) 1271
BsaBI GATNNNNATC 1 cut(s) 1005
BsaHI GRCGYC 2 cut(s) 168, 1302
BsaI GGTCTC 2 cut(s) 867, 1426
BsaJI CCNNGG 5 cut(s) 532, 729, 838, 868, 922
BsaWI WCCGGW 1 cut(s) 1305
BsaXI ACNNNNNCTCC 4 cut(s) 641, 671, 1627, 1657
Bsc4I CCNNNNNNNGG 6 cut(s) 226, 361, 839, 1203, 1339, 1417
Bse118I RCCGGY 1 cut(s) 1356
Bse1I ACTGG 3 cut(s) 467, 1582, 1620
Bse8I GATNNNNATC 1 cut(s) 1005
BseAI TCCGGA 1 cut(s) 1305
BseBI CCWGG 3 cut(s) 577, 730, 840
BseCI ATCGAT 1 cut(s) 961
BseDI CCNNGG 5 cut(s) 532, 729, 838, 868, 922
BseGI GGATG 1 cut(s) 528
BseJI GATNNNNATC 1 cut(s) 1005
BseLI CCNNNNNNNGG 6 cut(s) 226, 361, 839, 1203, 1339, 1417
BseNI ACTGG 3 cut(s) 467, 1582, 1620
BseRI GAGGAG 5 cut(s) 646, 1152, 1182, 1629, 1632
BseSI GKGCMC 1 cut(s) 690
BseXI GCAGC 1 cut(s) 574
BseYI CCCAGC 1 cut(s) 1297
Bsh1285I CGRYCG 1 cut(s) 117
BshFI GGCC 2 cut(s) 322, 1360
BshVI ATCGAT 1 cut(s) 961
BsiEI CGRYCG 1 cut(s) 117
BsiHKAI GWGCWC 1 cut(s) 690
BsiSI CCGG 2 cut(s) 1306, 1357
BslFI GGGAC 1 cut(s) 1105
BslI CCNNNNNNNGG 6 cut(s) 226, 361, 839, 1203, 1339, 1417
BsmBI CGTCTC 2 cut(s) 1023, 1505
BsmFI GGGAC 1 cut(s) 1105
BsmI GAATGC 2 cut(s) 210, 828
BsnI GGCC 2 cut(s) 322, 1360
Bso31I GGTCTC 2 cut(s) 867, 1426
Bsp1286I GDGCHC 2 cut(s) 381, 690
Bsp13I TCCGGA 1 cut(s) 1305
BspACI CCGC 2 cut(s) 300, 585
BspANI GGCC 2 cut(s) 322, 1360
BspDI ATCGAT 1 cut(s) 961
BspEI TCCGGA 1 cut(s) 1305
BspHI TCATGA 1 cut(s) 643
BspLI GGNNCC 2 cut(s) 1310, 1361
BspPI GGATC 2 cut(s) 662, 829
BspTNI GGTCTC 2 cut(s) 867, 1426
BsrFI RCCGGY 1 cut(s) 1356
BsrI ACTGG 3 cut(s) 467, 1582, 1620
BssAI RCCGGY 1 cut(s) 1356
BssECI CCNNGG 5 cut(s) 532, 729, 838, 868, 922
BssNI GRCGYC 2 cut(s) 168, 1302
BssT1I CCWWGG 3 cut(s) 532, 868, 922
Bst2UI CCWGG 3 cut(s) 577, 730, 840
Bst4CI ACNGT 4 cut(s) 115, 311, 1388, 1482
Bst6I CTCTTC 1 cut(s) 126
BstACI GRCGYC 2 cut(s) 168, 1302
BstBAI YACGTR 1 cut(s) 1271
BstC8I GCNNGC 1 cut(s) 826
BstENI CCTNNNNNAGG 1 cut(s) 224
BstF5I GGATG 1 cut(s) 528
BstH2I RGCGCY 1 cut(s) 292
BstHHI GCGC 1 cut(s) 291
BstMCI CGRYCG 1 cut(s) 117
BstMWI GCNNNNNNNGC 2 cut(s) 1294, 1366
BstNI CCWGG 3 cut(s) 577, 730, 840
BstNSI RCATGY 2 cut(s) 803, 1405
BstSCI CCNGG 3 cut(s) 575, 728, 838
BstSFI CTRYAG 2 cut(s) 1198, 1387
BstSLI GKGCMC 1 cut(s) 690
BstV1I GCAGC 1 cut(s) 574
BstV2I GAAGAC 1 cut(s) 39
BstX2I RGATCY 1 cut(s) 328
BstYI RGATCY 1 cut(s) 328
Bsu15I ATCGAT 1 cut(s) 961
BsuRI GGCC 2 cut(s) 322, 1360
BsuTUI ATCGAT 1 cut(s) 961
BtsCI GGATG 1 cut(s) 528
BtsIMutI CAGTG 4 cut(s) 379, 477, 1250, 1543
Cac8I GCNNGC 1 cut(s) 826
CciI TCATGA 1 cut(s) 643
CfoI GCGC 1 cut(s) 291
Cfr10I RCCGGY 1 cut(s) 1356
Cfr13I GGNCC 3 cut(s) 1308, 1324, 1359
ClaI ATCGAT 1 cut(s) 961
CseI GACGC 2 cut(s) 176, 1291
CviAII CATG 8 cut(s) 295, 410, 644, 760, 800, 1044, 1402, 1412
DraI TTTAAA 1 cut(s) 559
Eam1104I CTCTTC 1 cut(s) 126
EarI CTCTTC 1 cut(s) 126
EciI GGCGGA 1 cut(s) 289
Eco130I CCWWGG 3 cut(s) 532, 868, 922
Eco147I AGGCCT 1 cut(s) 322
Eco24I GRGCYC 1 cut(s) 381
Eco31I GGTCTC 2 cut(s) 867, 1426
Eco47I GGWCC 2 cut(s) 1308, 1324
Eco57I CTGAAG 5 cut(s) 51, 150, 174, 345, 741
EcoNI CCTNNNNNAGG 1 cut(s) 224
EcoO109I RGGNCCY 1 cut(s) 1324
EcoRII CCWGG 3 cut(s) 575, 728, 838
EcoT14I CCWWGG 3 cut(s) 532, 868, 922
EcoT38I GRGCYC 1 cut(s) 381
ErhI CCWWGG 3 cut(s) 532, 868, 922
Esp3I CGTCTC 2 cut(s) 1023, 1505
FaeI CATG 8 cut(s) 298, 413, 647, 763, 803, 1047, 1405, 1415
FaqI GGGAC 1 cut(s) 1105
FatI CATG 8 cut(s) 294, 409, 643, 759, 799, 1043, 1401, 1411
FauNDI CATATG 1 cut(s) 745
FbaI TGATCA 1 cut(s) 265
FblI GTMKAC 3 cut(s) 110, 117, 306
Fnu4HI GCNGC 1 cut(s) 588
FokI GGATG 1 cut(s) 515
FriOI GRGCYC 1 cut(s) 381
Fsp4HI GCNGC 1 cut(s) 588
FspBI CTAG 4 cut(s) 488, 912, 966, 1010
GlaI GCGC 1 cut(s) 290
GluI GCNGC 1 cut(s) 588
GsaI CCCAGC 1 cut(s) 1301
GsuI CTGGAG 3 cut(s) 598, 1565, 1603
HaeII RGCGCY 1 cut(s) 292
HaeIII GGCC 2 cut(s) 322, 1360
HapII CCGG 2 cut(s) 1306, 1357
HgaI GACGC 2 cut(s) 176, 1291
HhaI GCGC 1 cut(s) 291
Hin1I GRCGYC 2 cut(s) 168, 1302
Hin1II CATG 8 cut(s) 298, 413, 647, 763, 803, 1047, 1405, 1415
Hin6I GCGC 1 cut(s) 289
HinP1I GCGC 1 cut(s) 289
HincII GTYRAC 4 cut(s) 111, 118, 307, 1131
HindII GTYRAC 4 cut(s) 111, 118, 307, 1131
HindIII AAGCTT 3 cut(s) 506, 1022, 1652
HinfI GANTC 6 cut(s) 491, 788, 1187, 1247, 1518, 1541
HpaI GTTAAC 1 cut(s) 1131
HpaII CCGG 2 cut(s) 1306, 1357
HphI GGTGA 2 cut(s) 1070, 1271
Hpy166II GTNNAC 7 cut(s) 82, 111, 118, 274, 307, 688, 1131
Hpy188I TCNGA 6 cut(s) 19, 346, 520, 721, 834, 1517
Hpy8I GTNNAC 7 cut(s) 82, 111, 118, 274, 307, 688, 1131
Hpy99I CGWCG 8 cut(s) 80, 112, 115, 308, 311, 1445, 1477, 1486
HpyAV CCTTC 6 cut(s) 21, 57, 149, 525, 676, 863
HpyCH4III ACNGT 4 cut(s) 115, 311, 1388, 1482
HpyCH4IV ACGT 4 cut(s) 78, 107, 609, 1270
HpyCH4V TGCA 5 cut(s) 590, 640, 688, 1115, 1288
HpyF10VI GCNNNNNNNGC 2 cut(s) 1294, 1366
HpySE526I ACGT 4 cut(s) 78, 107, 609, 1270
Hsp92I GRCGYC 2 cut(s) 168, 1302
Hsp92II CATG 8 cut(s) 298, 413, 647, 763, 803, 1047, 1405, 1415
HspAI GCGC 1 cut(s) 289
Kpn2I TCCGGA 1 cut(s) 1305
Ksp22I TGATCA 1 cut(s) 265
KspAI GTTAAC 1 cut(s) 1131
Lsp1109I GCAGC 1 cut(s) 574
LweI GCATC 1 cut(s) 649
MaeI CTAG 4 cut(s) 488, 912, 966, 1010
MaeII ACGT 4 cut(s) 78, 107, 609, 1270
MaeIII GTNAC 5 cut(s) 25, 707, 1070, 1248, 1538
MboII GAAGA 9 cut(s) 6, 44, 143, 338, 788, 1196, 1223, 1241, 1290
MflI RGATCY 1 cut(s) 328
MhlI GDGCHC 2 cut(s) 381, 690
MluCI AATT 7 cut(s) 417, 521, 879, 933, 1106, 1110, 1219
MlyI GAGTC 3 cut(s) 500, 1256, 1535
MroI TCCGGA 1 cut(s) 1305
MseI TTAA 5 cut(s) 144, 558, 807, 1109, 1130
MslI CAYNNNNRTG 1 cut(s) 748
MspA1I CMGCKG 1 cut(s) 587
MspI CCGG 2 cut(s) 1306, 1357
MspR9I CCNGG 3 cut(s) 577, 730, 840
Mva1269I GAATGC 2 cut(s) 210, 828
MvaI CCWGG 3 cut(s) 577, 730, 840
MwoI GCNNNNNNNGC 2 cut(s) 1294, 1366
NdeI CATATG 1 cut(s) 745
NlaIII CATG 8 cut(s) 298, 413, 647, 763, 803, 1047, 1405, 1415
NlaIV GGNNCC 2 cut(s) 1310, 1361
NmuCI GTSAC 4 cut(s) 25, 707, 1248, 1538
NspI RCATGY 2 cut(s) 803, 1405
PagI TCATGA 1 cut(s) 643
PceI AGGCCT 1 cut(s) 322
PciI ACATGT 2 cut(s) 799, 1401
PcsI WCGNNNNNNNCGW 1 cut(s) 1481
PctI GAATGC 2 cut(s) 210, 828
PfeI GAWTC 3 cut(s) 788, 1187, 1518
PflFI GACNNNGTC 1 cut(s) 1544
PfoI TCCNGGA 1 cut(s) 575
PkrI GCNGC 1 cut(s) 589
PleI GAGTC 3 cut(s) 499, 1255, 1535
PpsI GAGTC 3 cut(s) 499, 1255, 1535
Ppu21I YACGTR 1 cut(s) 1271
PpuMI RGGWCCY 1 cut(s) 1324
PscI ACATGT 2 cut(s) 799, 1401
PshBI ATTAAT 1 cut(s) 1109
Psp5II RGGWCCY 1 cut(s) 1324
Psp6I CCWGG 3 cut(s) 575, 728, 838
PspFI CCCAGC 1 cut(s) 1297
PspGI CCWGG 3 cut(s) 575, 728, 838
PspN4I GGNNCC 2 cut(s) 1310, 1361
PspPI GGNCC 3 cut(s) 1308, 1324, 1359
PspPPI RGGWCCY 1 cut(s) 1324
PsuI RGATCY 1 cut(s) 328
PsyI GACNNNGTC 1 cut(s) 1544
RseI CAYNNNNRTG 1 cut(s) 748
SalI GTCGAC 3 cut(s) 109, 116, 305
SaqAI TTAA 5 cut(s) 144, 558, 807, 1109, 1130
SatI GCNGC 1 cut(s) 588
Sau96I GGNCC 3 cut(s) 1308, 1324, 1359
SchI GAGTC 3 cut(s) 500, 1256, 1535
ScrFI CCNGG 3 cut(s) 577, 730, 840
SduI GDGCHC 2 cut(s) 381, 690
SfaNI GCATC 1 cut(s) 649
SfcI CTRYAG 2 cut(s) 1198, 1387
SgrDI CGTCGACG 2 cut(s) 109, 305
SinI GGWCC 2 cut(s) 1308, 1324
SmiMI CAYNNNNRTG 1 cut(s) 748
Sse9I AATT 7 cut(s) 417, 521, 879, 933, 1106, 1110, 1219
SseBI AGGCCT 1 cut(s) 322
SsiI CCGC 2 cut(s) 300, 585
SspMI CTAG 4 cut(s) 488, 912, 966, 1010
StuI AGGCCT 1 cut(s) 322
StyD4I CCNGG 3 cut(s) 575, 728, 838
StyI CCWWGG 3 cut(s) 532, 868, 922
TaaI ACNGT 4 cut(s) 115, 311, 1388, 1482
TaiI ACGT 4 cut(s) 81, 110, 612, 1273
TasI AATT 7 cut(s) 417, 521, 879, 933, 1106, 1110, 1219
TfiI GAWTC 3 cut(s) 788, 1187, 1518
Tru1I TTAA 5 cut(s) 144, 558, 807, 1109, 1130
Tru9I TTAA 5 cut(s) 144, 558, 807, 1109, 1130
TscAI CASTG 4 cut(s) 379, 484, 1257, 1543
TseFI GTSAC 4 cut(s) 25, 707, 1248, 1538
TseI GCWGC 1 cut(s) 587
Tsp45I GTSAC 4 cut(s) 25, 707, 1248, 1538
TspDTI ATGAA 3 cut(s) 194, 660, 729
TspGWI ACGGA 3 cut(s) 603, 618, 1047
TspRI CASTG 4 cut(s) 379, 484, 1257, 1543
Tth111I GACNNNGTC 1 cut(s) 1544
VneI GTGCAC 1 cut(s) 686
VpaK11BI GGWCC 2 cut(s) 1308, 1324
VspI ATTAAT 1 cut(s) 1109
XagI CCTNNNNNAGG 1 cut(s) 224
XapI RAATTY 3 cut(s) 521, 879, 933
XbaI TCTAGA 1 cut(s) 487
XceI RCATGY 2 cut(s) 803, 1405
XmiI GTMKAC 3 cut(s) 110, 117, 306
XspI CTAG 4 cut(s) 488, 912, 966, 1010
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.