Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0000658

Physical Location & Seq

Genomic Coordinates Reverse (-)

933341 .. 934464

Gene Structure 1124 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G03726.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 870 bp

ATGTCCCTGAAGAAGGAGATGTGGGATTCCAACGAAAAGACATGCGACGATTCGAACCAGCCTATACTTGTCGTGGACCTGATTAGATCAATCTTGGAACGTTTGAGCTTTGTTGATTTCCATCGAGCCAGATGCATTTCTTCATTATGGTACACTGCTTCGGAATCATGCATCGGAGGACCATCAACTCCATGGATCATCCTCTTTCCGAACGAATTTGTTGAAAGAAACAACGATTCATACTATAACAACGATTTCCACGTTTTGAATCTGTTTACTCGAGAGAGGATTCCTCTTCCGTCTCTAGAATCAACCGATGGATTTCCGATGAATATTACGAATAGACTAGACACTGCGGTTTTGTGGGTAGATGAAAAAAGCAGAGATTACTTAGTTGCTTGGAGTTACGGTGACATTTTTGCATATCGCAAGAATGGAGATGGAAACAATAGCTGGAAAGTGATTGAGCCTTTAAAGAATCAACGATGCGTTGATATGGTGTGTAAAGAAAGCAAGCTTTACGTGTTTAGTGATACTCGAGTCACTGTGTTTGATTTCTCCCGTAGTGATTCTCCAATGGAATGTGCAATTTTGGTCATTGCTAGCAGAGTGGAACCACATCCTGGGACGTTCTTATTCTTCGTCTACAAGTTGGATCCTAAGTCATCAAAATGGAGCATAATCAAATCTATAGGGGACGAAGCATTGATTTTGGATCTTGGAATAATTGTTGCAGCAAAAGATGGAGTTATGAAAAATTGCATATATTTAGTAATGATCATTTTCATAAGTACAGTGGGATTAGTCTATGCGGTGATAACGGATGCTCGTTGGTTTTTCCCCACTATCGGTGGAAAATGTTTGCTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006508 GO:0006511 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009719 GO:0009725 GO:0009741 GO:0009742 GO:0009755 GO:0009966 GO:0009967 GO:0009987 GO:0010033 GO:0010646 GO:0010647 GO:0014070 GO:0019538 GO:0019941 GO:0023051 GO:0023052 GO:0023056 GO:0030163 GO:0031974 GO:0031981 GO:0032870 GO:0033993 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043401 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0048518 GO:0048522 GO:0048545 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0050896 GO:0051603 GO:0051716 GO:0065007 GO:0070013 GO:0070887 GO:0071310 GO:0071367 GO:0071383 GO:0071396 GO:0071407 GO:0071495 GO:0071704 GO:1900457 GO:1900459 GO:1901564 GO:1901565 GO:1901575 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF295 F-box

Protein Analysis

289

Amino Acids

33.07

Weight (kDa)

5.36

Isoelectric Point (pI)

35.61

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_KIB1-4	PF03478	52 - 232	9.4e-19	KIB1-4 beta-propeller

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000658)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10110 AT1G27540 AT1G27540 AT1G27540 AT1G27580 AT1G67160 AT1G69090 AT2G03560 AT2G03580 AT2G03610 AT2G04810 AT2G04830 AT2G04840 AT2G05970 AT2G14290 AT2G14500 AT2G24080 AT2G33190 AT2G33200 AT3G03726 AT3G03726 AT3G03730 AT3G22333 AT3G22337 AT3G22345 AT4G10820 AT4G12810 AT4G12820 AT4G14165 AT4G17565 AT4G22035 AT4G22060 AT4G22165 AT4G22170 AT4G22180 AT4G22660 AT5G14160 AT5G25290 AT5G25300 AT5G38270 AT5G66830
fragaria_vesca	FvH4_1g02012 FvH4_1g02041 FvH4_1g02212 FvH4_1g02521 FvH4_1g02622 FvH4_1g23804 FvH4_7g23891
rosa_chinensis	RchiOBHm_Chr6g0254461 RchiOBHm_Chr6g0254471 RchiOBHm_Chr6g0254481
rosa_laevigata	RLG00000014912 RLG00000015833 RLG00000015855
rosa_multiflora	Rmu_sc0002296.1_g000011 Rmu_sc0009578.1_g000007 Rmu_sc0009578.1_g000009 Rmu_sc0017669.1_g000012 Rmu_ssc0000481.1_g000005
rosa_roxburghii	Rroxscaffold_1G00018640 Rroxscaffold_2G00153700 Rroxscaffold_7G00210770
rosa_rugosa	Rorug01G0474100.1 Rorug01G0474200
rosa_samantha	Rh2BG027100 Rh2DG027600 Rh2DG027700 Rh5AG407300 Rh5BG420500 Rh6AG069500 Rh6AG069700 Rh6BG062100 Rh6BG062300
rosa_wichuraiana	Rw2G002180 Rw5G038360 Rw6G006110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	623
AccI	GTMKAC	1 cut(s)	645
AciI	CCGC	2 cut(s)	356, 812
AclI	AACGTT	1 cut(s)	100
AclWI	GGATC	4 cut(s)	203, 650, 663, 723
AcsI	RAATTY	1 cut(s)	215
AcuI	CTGAAG	1 cut(s)	29
AfaI	GTAC	2 cut(s)	152, 793
AfiI	CCNNNNNNNGG	3 cut(s)	13, 623, 848
AflIII	ACRYGT	1 cut(s)	522
AgsI	TTSAA	2 cut(s)	224, 268
AjnI	CCWGG	1 cut(s)	622
AluBI	AGCT	3 cut(s)	108, 453, 517
AluI	AGCT	3 cut(s)	108, 453, 517
Alw26I	GTCTC	1 cut(s)	306
AlwI	GGATC	4 cut(s)	203, 650, 663, 723
Ama87I	CYCGRG	2 cut(s)	279, 537
ApeKI	GCWGC	1 cut(s)	734
ApoI	RAATTY	1 cut(s)	215
AspS9I	GGNCC	2 cut(s)	76, 179
AsuHPI	GGTGA	2 cut(s)	422, 826
AsuII	TTCGAA	1 cut(s)	53
AsuNHI	GCTAGC	1 cut(s)	602
AvaI	CYCGRG	2 cut(s)	279, 537
AvaII	GGWCC	2 cut(s)	76, 179
BaeI	ACNNNNGTAYC	2 cut(s)	525, 558
BamHI	GGATCC	1 cut(s)	655
BbvI	GCAGC	1 cut(s)	746
BccI	CCATC	5 cut(s)	129, 190, 311, 434, 737
BcgI	CGANNNNNNTGC	2 cut(s)	114, 148
BciT130I	CCWGG	1 cut(s)	624
BclI	TGATCA	1 cut(s)	777
BcoDI	GTCTC	1 cut(s)	306
BfaI	CTAG	3 cut(s)	305, 347, 603
BfmI	CTRYAG	1 cut(s)	690
BisI	GCNGC	1 cut(s)	735
BlsI	GCNGC	1 cut(s)	736
Bme1390I	CCNGG	1 cut(s)	624
Bme18I	GGWCC	2 cut(s)	76, 179
BmeT110I	CYCGRG	2 cut(s)	279, 537
BmgT120I	GGNCC	2 cut(s)	76, 179
BmiI	GGNNCC	2 cut(s)	615, 657
BmrFI	CCNGG	1 cut(s)	624
BmsI	GCATC	4 cut(s)	122, 180, 476, 814
BmtI	GCTAGC	1 cut(s)	606
BplI	GAGNNNNNCTC	2 cut(s)	277, 309
Bpu14I	TTCGAA	1 cut(s)	53
BsaAI	YACGTR	1 cut(s)	523
BsaBI	GATNNNNATC	1 cut(s)	120
BsaJI	CCNNGG	2 cut(s)	191, 623
BsaXI	ACNNNNNCTCC	2 cut(s)	394, 424
Bsc4I	CCNNNNNNNGG	3 cut(s)	13, 623, 848
Bse3DI	GCAATG	1 cut(s)	597
Bse8I	GATNNNNATC	1 cut(s)	120
BseBI	CCWGG	1 cut(s)	624
BseDI	CCNNGG	2 cut(s)	191, 623
BseGI	GGATG	3 cut(s)	198, 619, 829
BseJI	GATNNNNATC	1 cut(s)	120
BseLI	CCNNNNNNNGG	3 cut(s)	13, 623, 848
BseMI	GCAATG	1 cut(s)	597
BseXI	GCAGC	1 cut(s)	746
BsiHKCI	CYCGRG	2 cut(s)	279, 537
BslFI	GGGAC	2 cut(s)	640, 710
BslI	CCNNNNNNNGG	3 cut(s)	13, 623, 848
BsmAI	GTCTC	1 cut(s)	306
BsmBI	CGTCTC	1 cut(s)	306
BsmFI	GGGAC	2 cut(s)	640, 710
BsoBI	CYCGRG	2 cut(s)	279, 537
Bsp119I	TTCGAA	1 cut(s)	53
Bsp143I	GATC	5 cut(s)	86, 195, 655, 715, 777
Bsp19I	CCATGG	1 cut(s)	191
BspACI	CCGC	2 cut(s)	356, 812
BspLI	GGNNCC	2 cut(s)	615, 657
BspOI	GCTAGC	1 cut(s)	606
BspPI	GGATC	4 cut(s)	203, 650, 663, 723
BspT104I	TTCGAA	1 cut(s)	53
BsrDI	GCAATG	1 cut(s)	597
BssECI	CCNNGG	2 cut(s)	191, 623
BssMI	GATC	5 cut(s)	86, 195, 655, 715, 777
BssT1I	CCWWGG	1 cut(s)	191
Bst2UI	CCWGG	1 cut(s)	624
Bst4CI	ACNGT	3 cut(s)	410, 547, 796
Bst6I	CTCTTC	1 cut(s)	300
BstBAI	YACGTR	1 cut(s)	523
BstBI	TTCGAA	1 cut(s)	53
BstC8I	GCNNGC	2 cut(s)	515, 604
BstDEI	CTNAG	2 cut(s)	391, 660
BstDSI	CCRYGG	1 cut(s)	191
BstENI	CCTNNNNNAGG	1 cut(s)	11
BstF5I	GGATG	3 cut(s)	198, 619, 829
BstKTI	GATC	5 cut(s)	89, 198, 658, 718, 780
BstMAI	GTCTC	1 cut(s)	306
BstMBI	GATC	5 cut(s)	86, 195, 655, 715, 777
BstNI	CCWGG	1 cut(s)	624
BstNSI	RCATGY	1 cut(s)	45
BstSCI	CCNGG	1 cut(s)	622
BstSFI	CTRYAG	1 cut(s)	690
BstV1I	GCAGC	1 cut(s)	746
BstX2I	RGATCY	2 cut(s)	655, 715
BstYI	RGATCY	2 cut(s)	655, 715
BtgI	CCRYGG	1 cut(s)	191
BtsCI	GGATG	3 cut(s)	198, 619, 829
BtsI	GCAGTG	2 cut(s)	153, 351
BtsIMutI	CAGTG	4 cut(s)	153, 351, 543, 801
Cac8I	GCNNGC	2 cut(s)	515, 604
Cfr13I	GGNCC	2 cut(s)	76, 179
Csp6I	GTAC	2 cut(s)	151, 792
CviAII	CATG	3 cut(s)	42, 168, 192
CviJI	RGCY	6 cut(s)	61, 108, 128, 453, 469, 517
CviKI_1	RGCY	6 cut(s)	61, 108, 128, 453, 469, 517
CviQI	GTAC	2 cut(s)	151, 792
DdeI	CTNAG	2 cut(s)	391, 660
DpnI	GATC	5 cut(s)	88, 197, 657, 717, 779
DpnII	GATC	5 cut(s)	86, 195, 655, 715, 777
DraI	TTTAAA	1 cut(s)	474
Eam1104I	CTCTTC	1 cut(s)	300
EarI	CTCTTC	1 cut(s)	300
Eco130I	CCWWGG	1 cut(s)	191
Eco47I	GGWCC	2 cut(s)	76, 179
Eco57I	CTGAAG	1 cut(s)	29
Eco88I	CYCGRG	2 cut(s)	279, 537
EcoNI	CCTNNNNNAGG	1 cut(s)	11
EcoRII	CCWGG	1 cut(s)	622
EcoT14I	CCWWGG	1 cut(s)	191
EcoT22I	ATGCAT	2 cut(s)	137, 173
ErhI	CCWWGG	1 cut(s)	191
Esp3I	CGTCTC	1 cut(s)	306
FaeI	CATG	3 cut(s)	45, 171, 195
FaqI	GGGAC	2 cut(s)	640, 710
FatI	CATG	3 cut(s)	41, 167, 191
FbaI	TGATCA	1 cut(s)	777
FblI	GTMKAC	1 cut(s)	645
Fnu4HI	GCNGC	1 cut(s)	735
FokI	GGATG	3 cut(s)	185, 606, 836
Fsp4HI	GCNGC	1 cut(s)	735
FspBI	CTAG	3 cut(s)	305, 347, 603
GluI	GCNGC	1 cut(s)	735
Hin1II	CATG	3 cut(s)	45, 171, 195
HindIII	AAGCTT	1 cut(s)	515
HphI	GGTGA	2 cut(s)	422, 826
Hpy166II	GTNNAC	4 cut(s)	76, 153, 276, 646
Hpy188I	TCNGA	4 cut(s)	163, 176, 210, 327
Hpy188III	TCNNGA	2 cut(s)	281, 305
Hpy8I	GTNNAC	4 cut(s)	76, 153, 276, 646
Hpy99I	CGWCG	1 cut(s)	50
HpyAV	CCTTC	1 cut(s)	7
HpyCH4III	ACNGT	3 cut(s)	410, 547, 796
HpyCH4IV	ACGT	4 cut(s)	100, 261, 522, 629
HpyCH4V	TGCA	6 cut(s)	135, 171, 422, 587, 734, 762
HpyF3I	CTNAG	2 cut(s)	391, 660
HpySE526I	ACGT	4 cut(s)	100, 261, 522, 629
Hsp92II	CATG	3 cut(s)	45, 171, 195
Ksp22I	TGATCA	1 cut(s)	777
Kzo9I	GATC	5 cut(s)	86, 195, 655, 715, 777
LmnI	GCTCC	1 cut(s)	675
LpnPI	CCDG	7 cut(s)	20, 71, 92, 142, 439, 609, 636
Lsp1109I	GCAGC	1 cut(s)	746
LweI	GCATC	4 cut(s)	122, 180, 476, 814
MaeI	CTAG	3 cut(s)	305, 347, 603
MaeII	ACGT	4 cut(s)	100, 261, 522, 629
MaeIII	GTNAC	3 cut(s)	404, 410, 541
MalI	GATC	5 cut(s)	88, 197, 657, 717, 779
MboI	GATC	5 cut(s)	86, 195, 655, 715, 777
MboII	GAAGA	4 cut(s)	22, 132, 287, 631
MflI	RGATCY	2 cut(s)	655, 715
MluCI	AATT	4 cut(s)	215, 588, 726, 757
MlyI	GAGTC	1 cut(s)	549
MmeI	TCCRAC	2 cut(s)	54, 633
MnlI	CCTC	4 cut(s)	170, 212, 279, 303
Mph1103I	ATGCAT	2 cut(s)	137, 173
MseI	TTAA	2 cut(s)	473, 868
MslI	CAYNNNNRTG	1 cut(s)	670
MspR9I	CCNGG	1 cut(s)	624
MvaI	CCWGG	1 cut(s)	624
NcoI	CCATGG	1 cut(s)	191
NdeII	GATC	5 cut(s)	86, 195, 655, 715, 777
NheI	GCTAGC	1 cut(s)	602
NlaIII	CATG	3 cut(s)	45, 171, 195
NlaIV	GGNNCC	2 cut(s)	615, 657
NmuCI	GTSAC	2 cut(s)	410, 541
NsiI	ATGCAT	2 cut(s)	137, 173
NspI	RCATGY	1 cut(s)	45
NspV	TTCGAA	1 cut(s)	53
PaeR7I	CTCGAG	2 cut(s)	279, 537
PcsI	WCGNNNNNNNCGW	1 cut(s)	258
PfeI	GAWTC	9 cut(s)	26, 50, 164, 236, 268, 289, 308, 478, 569
PflMI	CCANNNNNTGG	1 cut(s)	623
PkrI	GCNGC	1 cut(s)	736
PleI	GAGTC	1 cut(s)	548
PpsI	GAGTC	1 cut(s)	548
Ppu21I	YACGTR	1 cut(s)	523
Psp1406I	AACGTT	1 cut(s)	100
Psp6I	CCWGG	1 cut(s)	622
PspGI	CCWGG	1 cut(s)	622
PspN4I	GGNNCC	2 cut(s)	615, 657
PspPI	GGNCC	2 cut(s)	76, 179
PspXI	VCTCGAGB	1 cut(s)	537
PsuI	RGATCY	2 cut(s)	655, 715
RsaI	GTAC	2 cut(s)	152, 793
RsaNI	GTAC	2 cut(s)	151, 792
RseI	CAYNNNNRTG	1 cut(s)	670
SaqAI	TTAA	2 cut(s)	473, 868
SatI	GCNGC	1 cut(s)	735
Sau3AI	GATC	5 cut(s)	86, 195, 655, 715, 777
Sau96I	GGNCC	2 cut(s)	76, 179
SchI	GAGTC	1 cut(s)	549
ScrFI	CCNGG	1 cut(s)	624
SetI	ASST	8 cut(s)	81, 103, 110, 264, 455, 519, 525, 632
SfaNI	GCATC	4 cut(s)	122, 180, 476, 814
SfcI	CTRYAG	1 cut(s)	690
Sfr274I	CTCGAG	2 cut(s)	279, 537
SfuI	TTCGAA	1 cut(s)	53
SinI	GGWCC	2 cut(s)	76, 179
SlaI	CTCGAG	2 cut(s)	279, 537
SmiMI	CAYNNNNRTG	1 cut(s)	670
SmlI	CTYRAG	2 cut(s)	279, 537
SmoI	CTYRAG	2 cut(s)	279, 537
Sse9I	AATT	4 cut(s)	215, 588, 726, 757
SsiI	CCGC	2 cut(s)	356, 812
SspI	AATATT	1 cut(s)	334
SspMI	CTAG	3 cut(s)	305, 347, 603
StyD4I	CCNGG	1 cut(s)	622
StyI	CCWWGG	1 cut(s)	191
TaaI	ACNGT	3 cut(s)	410, 547, 796
TaiI	ACGT	4 cut(s)	103, 264, 525, 632
TaqI	TCGA	4 cut(s)	53, 124, 280, 538
TasI	AATT	4 cut(s)	215, 588, 726, 757
TatI	WGTACW	1 cut(s)	791
TfiI	GAWTC	9 cut(s)	26, 50, 164, 236, 268, 289, 308, 478, 569
Tru1I	TTAA	2 cut(s)	473, 868
Tru9I	TTAA	2 cut(s)	473, 868
TscAI	CASTG	4 cut(s)	160, 358, 550, 801
TseFI	GTSAC	2 cut(s)	410, 541
TseI	GCWGC	1 cut(s)	734
Tsp45I	GTSAC	2 cut(s)	410, 541
TspDTI	ATGAA	6 cut(s)	132, 228, 344, 387, 767, 775
TspGWI	ACGGA	2 cut(s)	288, 836
TspRI	CASTG	4 cut(s)	160, 358, 550, 801
Van91I	CCANNNNNTGG	1 cut(s)	623
VpaK11BI	GGWCC	2 cut(s)	76, 179
XagI	CCTNNNNNAGG	1 cut(s)	11
XapI	RAATTY	1 cut(s)	215
XbaI	TCTAGA	1 cut(s)	304
XceI	RCATGY	1 cut(s)	45
XcmI	CCANNNNNNNNNTGG	1 cut(s)	189
XhoI	CTCGAG	2 cut(s)	279, 537
XmiI	GTMKAC	1 cut(s)	645
XspI	CTAG	3 cut(s)	305, 347, 603
Zsp2I	ATGCAT	2 cut(s)	137, 173

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.