Rmu_sc0017669.1_g000012

f-box protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0017669.1
Physical Location & Seq
Reverse (-)
50474 .. 52723
2250 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0017669.1_g000012.1.cds

Sequence Viewer

Length: 1455 bp
atggatttgccttcttcagatatagtgactgaagaccaccataccaaaagaaaagagaaacgaaggaggactgacgacttgaacaaagacagaaagagacagagaacgtcgacggtcgaccacctgactgaagagaagaagattaaaaggactgaaggaagtaatgacgcccacccgatgaaacgaaaagataaaagaacaagaatgcctgacgacgacctgaaaaaggaaaataagagacaaagaaccaaagagaaaaggtttgatcaggttcacacagccatcaagcgcctcatgtccgccgtcgacggtggtagtaggcctgaagatcttgtaaggttgaccgatggcaaccctgaggtggtggagatcaatgagcccaagtgcgttgagtatttgaacaagatacatgaccaaattgttgagctaaaacagaatagtatcaaaaaaagaaaagcaaactggtctgggcttcccactgagcttctagagtccatcttgaaaaagcttataccttctgaatttgacatccttggctttagacatatcctatattttaaagccgtttgtcattcctggagaaccgctgcaaaatcttgtagctcttacgttccgttgcctcgaactccgtgtcttttgcatcatgaaaacaactcctccctctttgatcccataggaaagaaggtgcacaagatcaggaacatctgtgactttttttctgacgccacctgggtcggttcatcatatgggtggattgtcatgttttaccaagacgaagatttgaaagaatcaatggcacatgtttttaacccgatttcaagagccagcattccgatcccaggcacaaagacccttcctaactacaaccttggagaccaaatttctaaagctattgtttcgtctaatccctctagctacaaccttggagatcaaattcctaaaggtattgtttcgtccaatcgatctagcaacaagaactattttgtggtagtggaatatgatggaaatctagcatactataagcttggagacggagacaaatcatggagaaagttgggtgataataagggttacaatcccaaatgtattatgtttcacgatgaccaattaattgcattgtcccagacgttaactgagatttggaacttcaaggaataccctcctcaacaacctcggcgtattgaagactctcctccctacagatgggttgaagataccaatttggttgaagatacttatttggtggagtcactgacgggtgatattttacgtgtgggaagaagtatgcaaaaagggaagaaacttcctgctgtctctgctacaggcatttcaactacattggacaatgcaatggactgtgaaaagtcattccaatctgaagccagtggtgcagtcttgttagctgaaatgttgcggtactacagatggtgcaggttgtcctttaacaacgcgtga

Protein Analysis

484

Amino Acids

55.68

Weight (kDa)

9.08

Isoelectric Point (pI)

50.68

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1422
AccI GTMKAC 3 cut(s) 110, 117, 306
AccII CGCG 1 cut(s) 1451
AciI CCGC 3 cut(s) 300, 585, 1414
AclWI GGATC 2 cut(s) 662, 829
AcsI RAATTY 3 cut(s) 521, 879, 933
AcuI CTGAAG 5 cut(s) 51, 150, 174, 345, 1398
AcyI GRCGYC 2 cut(s) 168, 723
AfaI GTAC 1 cut(s) 1418
AfiI CCNNNNNNNGG 4 cut(s) 226, 361, 839, 1203
AflIII ACRYGT 3 cut(s) 799, 1270, 1449
AjnI CCWGG 3 cut(s) 575, 728, 838
AluBI AGCT 8 cut(s) 427, 484, 508, 603, 890, 915, 1024, 1403
AluI AGCT 8 cut(s) 427, 484, 508, 603, 890, 915, 1024, 1403
Alw21I GWGCWC 1 cut(s) 690
Alw26I GTCTC 6 cut(s) 91, 232, 867, 1023, 1029, 1318
Alw44I GTGCAC 1 cut(s) 686
AlwI GGATC 2 cut(s) 662, 829
AoxI GGCC 1 cut(s) 320
ApaLI GTGCAC 1 cut(s) 686
ApeKI GCWGC 1 cut(s) 587
ApoI RAATTY 3 cut(s) 521, 879, 933
ArsI GACNNNNNNTTYG 2 cut(s) 616, 648
AseI ATTAAT 1 cut(s) 1109
AspLEI GCGC 1 cut(s) 291
AsuHPI GGTGA 2 cut(s) 1070, 1271
AxyI CCTNAGG 1 cut(s) 357
BaeGI GKGCMC 1 cut(s) 690
BanII GRGCYC 1 cut(s) 381
BbsI GAAGAC 2 cut(s) 39, 1191
Bbv12I GWGCWC 1 cut(s) 690
BbvI GCAGC 1 cut(s) 574
BccI CCATC 6 cut(s) 290, 341, 503, 995, 1197, 1419
BceAI ACGGC 2 cut(s) 287, 548
BciT130I CCWGG 3 cut(s) 577, 730, 840
BclI TGATCA 1 cut(s) 265
BcoDI GTCTC 6 cut(s) 91, 232, 867, 1023, 1029, 1318
BfaI CTAG 4 cut(s) 488, 912, 966, 1010
BfmI CTRYAG 3 cut(s) 1198, 1320, 1420
BfoI RGCGCY 1 cut(s) 292
BfuAI ACCTGC 1 cut(s) 1422
BglII AGATCT 1 cut(s) 328
BisI GCNGC 1 cut(s) 588
BlsI GCNGC 1 cut(s) 589
Bme1390I CCNGG 3 cut(s) 577, 730, 840
BmrFI CCNGG 3 cut(s) 577, 730, 840
BmsI GCATC 1 cut(s) 649
BpiI GAAGAC 2 cut(s) 39, 1191
BpmI CTGGAG 1 cut(s) 598
Bsa29I ATCGAT 1 cut(s) 961
BsaAI YACGTR 1 cut(s) 1271
BsaBI GATNNNNATC 1 cut(s) 1005
BsaHI GRCGYC 2 cut(s) 168, 723
BsaI GGTCTC 1 cut(s) 867
BsaJI CCNNGG 6 cut(s) 532, 729, 838, 868, 922, 1172
BsaXI ACNNNNNCTCC 2 cut(s) 641, 671
Bsc4I CCNNNNNNNGG 4 cut(s) 226, 361, 839, 1203
Bse1I ACTGG 2 cut(s) 467, 1383
Bse21I CCTNAGG 1 cut(s) 357
Bse3DI GCAATG 1 cut(s) 1356
Bse8I GATNNNNATC 1 cut(s) 1005
BseBI CCWGG 3 cut(s) 577, 730, 840
BseCI ATCGAT 1 cut(s) 961
BseDI CCNNGG 6 cut(s) 532, 729, 838, 868, 922, 1172
BseGI GGATG 1 cut(s) 528
BseJI GATNNNNATC 1 cut(s) 1005
BseLI CCNNNNNNNGG 4 cut(s) 226, 361, 839, 1203
BseMI GCAATG 1 cut(s) 1356
BseMII CTCAG 3 cut(s) 348, 471, 1125
BseNI ACTGG 2 cut(s) 467, 1383
BseRI GAGGAG 3 cut(s) 646, 1152, 1182
BseSI GKGCMC 1 cut(s) 690
BseXI GCAGC 1 cut(s) 574
BsgI GTGCAG 2 cut(s) 1410, 1450
Bsh1236I CGCG 1 cut(s) 1451
Bsh1285I CGRYCG 1 cut(s) 117
BshFI GGCC 1 cut(s) 322
BshVI ATCGAT 1 cut(s) 961
BsiEI CGRYCG 1 cut(s) 117
BsiHKAI GWGCWC 1 cut(s) 690
BslFI GGGAC 1 cut(s) 1105
BslI CCNNNNNNNGG 4 cut(s) 226, 361, 839, 1203
BsmAI GTCTC 6 cut(s) 91, 232, 867, 1023, 1029, 1318
BsmBI CGTCTC 1 cut(s) 1023
BsmFI GGGAC 1 cut(s) 1105
BsmI GAATGC 2 cut(s) 210, 828
BsnI GGCC 1 cut(s) 322
Bso31I GGTCTC 1 cut(s) 867
Bsp1286I GDGCHC 2 cut(s) 381, 690
Bsp143I GATC 8 cut(s) 265, 328, 369, 667, 693, 834, 928, 962
BspACI CCGC 3 cut(s) 300, 585, 1414
BspANI GGCC 1 cut(s) 322
BspCNI CTCAG 3 cut(s) 349, 472, 1126
BspDI ATCGAT 1 cut(s) 961
BspFNI CGCG 1 cut(s) 1451
BspHI TCATGA 1 cut(s) 643
BspMI ACCTGC 1 cut(s) 1422
BspPI GGATC 2 cut(s) 662, 829
BspTNI GGTCTC 1 cut(s) 867
BsrDI GCAATG 1 cut(s) 1356
BsrI ACTGG 2 cut(s) 467, 1383
BssECI CCNNGG 6 cut(s) 532, 729, 838, 868, 922, 1172
BssMI GATC 8 cut(s) 265, 328, 369, 667, 693, 834, 928, 962
BssNI GRCGYC 2 cut(s) 168, 723
BssT1I CCWWGG 3 cut(s) 532, 868, 922
Bst2UI CCWGG 3 cut(s) 577, 730, 840
Bst4CI ACNGT 3 cut(s) 115, 311, 1358
Bst6I CTCTTC 1 cut(s) 126
BstACI GRCGYC 2 cut(s) 168, 723
BstBAI YACGTR 1 cut(s) 1271
BstC8I GCNNGC 1 cut(s) 826
BstDEI CTNAG 3 cut(s) 357, 480, 1134
BstENI CCTNNNNNAGG 1 cut(s) 224
BstF5I GGATG 1 cut(s) 528
BstFNI CGCG 1 cut(s) 1451
BstH2I RGCGCY 1 cut(s) 292
BstHHI GCGC 1 cut(s) 291
BstKTI GATC 8 cut(s) 268, 331, 372, 670, 696, 837, 931, 965
BstMAI GTCTC 6 cut(s) 91, 232, 867, 1023, 1029, 1318
BstMBI GATC 8 cut(s) 265, 328, 369, 667, 693, 834, 928, 962
BstMCI CGRYCG 1 cut(s) 117
BstMWI GCNNNNNNNGC 2 cut(s) 1316, 1388
BstNI CCWGG 3 cut(s) 577, 730, 840
BstNSI RCATGY 1 cut(s) 803
BstSCI CCNGG 3 cut(s) 575, 728, 838
BstSFI CTRYAG 3 cut(s) 1198, 1320, 1420
BstSLI GKGCMC 1 cut(s) 690
BstUI CGCG 1 cut(s) 1451
BstV1I GCAGC 1 cut(s) 574
BstV2I GAAGAC 2 cut(s) 39, 1191
BstX2I RGATCY 1 cut(s) 328
BstYI RGATCY 1 cut(s) 328
Bsu15I ATCGAT 1 cut(s) 961
Bsu36I CCTNAGG 1 cut(s) 357
BsuRI GGCC 1 cut(s) 322
BsuTUI ATCGAT 1 cut(s) 961
BtsCI GGATG 1 cut(s) 528
BtsIMutI CAGTG 3 cut(s) 477, 1250, 1390
BveI ACCTGC 1 cut(s) 1422
Cac8I GCNNGC 1 cut(s) 826
CciI TCATGA 1 cut(s) 643
CfoI GCGC 1 cut(s) 291
ClaI ATCGAT 1 cut(s) 961
CseI GACGC 2 cut(s) 176, 731
Csp6I GTAC 1 cut(s) 1417
CviAII CATG 6 cut(s) 295, 410, 644, 760, 800, 1044
CviQI GTAC 1 cut(s) 1417
DdeI CTNAG 3 cut(s) 357, 480, 1134
DpnI GATC 8 cut(s) 267, 330, 371, 669, 695, 836, 930, 964
DpnII GATC 8 cut(s) 265, 328, 369, 667, 693, 834, 928, 962
DraI TTTAAA 1 cut(s) 559
Eam1104I CTCTTC 1 cut(s) 126
EarI CTCTTC 1 cut(s) 126
EciI GGCGGA 1 cut(s) 289
Eco130I CCWWGG 3 cut(s) 532, 868, 922
Eco147I AGGCCT 1 cut(s) 322
Eco24I GRGCYC 1 cut(s) 381
Eco31I GGTCTC 1 cut(s) 867
Eco57I CTGAAG 5 cut(s) 51, 150, 174, 345, 1398
Eco81I CCTNAGG 1 cut(s) 357
EcoNI CCTNNNNNAGG 1 cut(s) 224
EcoRII CCWGG 3 cut(s) 575, 728, 838
EcoT14I CCWWGG 3 cut(s) 532, 868, 922
EcoT38I GRGCYC 1 cut(s) 381
ErhI CCWWGG 3 cut(s) 532, 868, 922
Esp3I CGTCTC 1 cut(s) 1023
FaeI CATG 6 cut(s) 298, 413, 647, 763, 803, 1047
FaqI GGGAC 1 cut(s) 1105
FatI CATG 6 cut(s) 294, 409, 643, 759, 799, 1043
FauNDI CATATG 1 cut(s) 745
FbaI TGATCA 1 cut(s) 265
FblI GTMKAC 3 cut(s) 110, 117, 306
Fnu4HI GCNGC 1 cut(s) 588
FokI GGATG 1 cut(s) 515
FriOI GRGCYC 1 cut(s) 381
Fsp4HI GCNGC 1 cut(s) 588
FspBI CTAG 4 cut(s) 488, 912, 966, 1010
GlaI GCGC 1 cut(s) 290
GluI GCNGC 1 cut(s) 588
GsuI CTGGAG 1 cut(s) 598
HaeII RGCGCY 1 cut(s) 292
HaeIII GGCC 1 cut(s) 322
HgaI GACGC 2 cut(s) 176, 731
HhaI GCGC 1 cut(s) 291
Hin1I GRCGYC 2 cut(s) 168, 723
Hin1II CATG 6 cut(s) 298, 413, 647, 763, 803, 1047
Hin6I GCGC 1 cut(s) 289
HinP1I GCGC 1 cut(s) 289
HincII GTYRAC 5 cut(s) 111, 118, 307, 342, 1131
HindII GTYRAC 5 cut(s) 111, 118, 307, 342, 1131
HindIII AAGCTT 2 cut(s) 506, 1022
HinfI GANTC 4 cut(s) 491, 788, 1187, 1247
HpaI GTTAAC 1 cut(s) 1131
HphI GGTGA 2 cut(s) 1070, 1271
Hpy166II GTNNAC 7 cut(s) 111, 118, 274, 307, 342, 688, 1131
Hpy188I TCNGA 5 cut(s) 19, 520, 721, 834, 1378
Hpy188III TCNNGA 6 cut(s) 488, 499, 644, 697, 819, 1097
Hpy8I GTNNAC 7 cut(s) 111, 118, 274, 307, 342, 688, 1131
Hpy99I CGWCG 5 cut(s) 112, 115, 218, 308, 311
HpyAV CCTTC 6 cut(s) 21, 57, 149, 525, 676, 863
HpyCH4III ACNGT 3 cut(s) 115, 311, 1358
HpyCH4IV ACGT 4 cut(s) 107, 609, 1127, 1270
HpyCH4V TGCA 8 cut(s) 590, 640, 688, 1115, 1288, 1349, 1391, 1431
HpyF10VI GCNNNNNNNGC 2 cut(s) 1316, 1388
HpyF3I CTNAG 3 cut(s) 357, 480, 1134
HpySE526I ACGT 4 cut(s) 107, 609, 1127, 1270
Hsp92I GRCGYC 2 cut(s) 168, 723
Hsp92II CATG 6 cut(s) 298, 413, 647, 763, 803, 1047
HspAI GCGC 1 cut(s) 289
Ksp22I TGATCA 1 cut(s) 265
KspAI GTTAAC 1 cut(s) 1131
Kzo9I GATC 8 cut(s) 265, 328, 369, 667, 693, 834, 928, 962
Lsp1109I GCAGC 1 cut(s) 574
LweI GCATC 1 cut(s) 649
MaeI CTAG 4 cut(s) 488, 912, 966, 1010
MaeII ACGT 4 cut(s) 107, 609, 1127, 1270
MaeIII GTNAC 4 cut(s) 25, 707, 1070, 1248
MalI GATC 8 cut(s) 267, 330, 371, 669, 695, 836, 930, 964
MboI GATC 8 cut(s) 265, 328, 369, 667, 693, 834, 928, 962
MflI RGATCY 1 cut(s) 328
MhlI GDGCHC 2 cut(s) 381, 690
MluCI AATT 7 cut(s) 417, 521, 879, 933, 1106, 1110, 1219
MluI ACGCGT 1 cut(s) 1449
MlyI GAGTC 3 cut(s) 500, 1181, 1256
MseI TTAA 6 cut(s) 144, 558, 807, 1109, 1130, 1443
MslI CAYNNNNRTG 1 cut(s) 748
MspA1I CMGCKG 1 cut(s) 587
MspR9I CCNGG 3 cut(s) 577, 730, 840
Mva1269I GAATGC 2 cut(s) 210, 828
MvaI CCWGG 3 cut(s) 577, 730, 840
MvnI CGCG 1 cut(s) 1451
MwoI GCNNNNNNNGC 2 cut(s) 1316, 1388
NdeI CATATG 1 cut(s) 745
NdeII GATC 8 cut(s) 265, 328, 369, 667, 693, 834, 928, 962
NlaIII CATG 6 cut(s) 298, 413, 647, 763, 803, 1047
NmeAIII GCCGAG 1 cut(s) 1153
NmuCI GTSAC 3 cut(s) 25, 707, 1248
NspI RCATGY 1 cut(s) 803
PagI TCATGA 1 cut(s) 643
PceI AGGCCT 1 cut(s) 322
PciI ACATGT 1 cut(s) 799
PctI GAATGC 2 cut(s) 210, 828
PfeI GAWTC 1 cut(s) 788
PfoI TCCNGGA 1 cut(s) 575
PkrI GCNGC 1 cut(s) 589
PleI GAGTC 3 cut(s) 499, 1181, 1255
PpsI GAGTC 3 cut(s) 499, 1181, 1255
Ppu21I YACGTR 1 cut(s) 1271
PscI ACATGT 1 cut(s) 799
PshBI ATTAAT 1 cut(s) 1109
Psp6I CCWGG 3 cut(s) 575, 728, 838
PspGI CCWGG 3 cut(s) 575, 728, 838
PsuI RGATCY 1 cut(s) 328
RsaI GTAC 1 cut(s) 1418
RsaNI GTAC 1 cut(s) 1417
RseI CAYNNNNRTG 1 cut(s) 748
SalI GTCGAC 3 cut(s) 109, 116, 305
SaqAI TTAA 6 cut(s) 144, 558, 807, 1109, 1130, 1443
SatI GCNGC 1 cut(s) 588
Sau3AI GATC 8 cut(s) 265, 328, 369, 667, 693, 834, 928, 962
SchI GAGTC 3 cut(s) 500, 1181, 1256
ScrFI CCNGG 3 cut(s) 577, 730, 840
SduI GDGCHC 2 cut(s) 381, 690
SfaNI GCATC 1 cut(s) 649
SfcI CTRYAG 3 cut(s) 1198, 1320, 1420
SgrDI CGTCGACG 2 cut(s) 109, 305
SmiMI CAYNNNNRTG 1 cut(s) 748
Sse9I AATT 7 cut(s) 417, 521, 879, 933, 1106, 1110, 1219
SseBI AGGCCT 1 cut(s) 322
SsiI CCGC 3 cut(s) 300, 585, 1414
SspMI CTAG 4 cut(s) 488, 912, 966, 1010
StuI AGGCCT 1 cut(s) 322
StyD4I CCNGG 3 cut(s) 575, 728, 838
StyI CCWWGG 3 cut(s) 532, 868, 922
TaaI ACNGT 3 cut(s) 115, 311, 1358
TaiI ACGT 4 cut(s) 110, 612, 1130, 1273
TaqI TCGA 5 cut(s) 110, 117, 306, 622, 961
TaqII GACCGA 1 cut(s) 359
TasI AATT 7 cut(s) 417, 521, 879, 933, 1106, 1110, 1219
TfiI GAWTC 1 cut(s) 788
Tru1I TTAA 6 cut(s) 144, 558, 807, 1109, 1130, 1443
Tru9I TTAA 6 cut(s) 144, 558, 807, 1109, 1130, 1443
TscAI CASTG 3 cut(s) 484, 1257, 1390
TseFI GTSAC 3 cut(s) 25, 707, 1248
TseI GCWGC 1 cut(s) 587
Tsp45I GTSAC 3 cut(s) 25, 707, 1248
TspDTI ATGAA 3 cut(s) 194, 660, 729
TspGWI ACGGA 3 cut(s) 603, 618, 1047
TspRI CASTG 3 cut(s) 484, 1257, 1390
VneI GTGCAC 1 cut(s) 686
VspI ATTAAT 1 cut(s) 1109
XagI CCTNNNNNAGG 1 cut(s) 224
XapI RAATTY 3 cut(s) 521, 879, 933
XbaI TCTAGA 1 cut(s) 487
XceI RCATGY 1 cut(s) 803
XmiI GTMKAC 3 cut(s) 110, 117, 306
XspI CTAG 4 cut(s) 488, 912, 966, 1010
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.