Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5B

Orthogroup ID

OG0000658

Physical Location & Seq

Genomic Coordinates Reverse (-)

68036145 .. 68038122

Gene Structure 1978 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5BG420500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1635 bp

ATGGGTAGTGGGCACTCGCTTCTCTCTGTATTTTCCCCTACCATGGATTTGCCTTCTTCAGATATAGTGACTGAAGACCACCATACCAAAAGAAAAGAGAAACGAAGGAGGACTGACGGCGTAAACAAAGAAAGAAAGAGACAGAGAACGTCGACGGTCGACCACCTGACTGAAGAGAACAAGATTAAAAGGACTGAAGGAAGTAATGACGCCCACCCGATGAAACGAAAAGATAAAAGAACAAGAATGCCTGACAACGACCTGAAAAAGGGAAATAAGAGACAAAGAACCAAAGAGAAAAAGTTTGATCAGGTTCACACAGCCATCAAGCGCCTCATGTCCGCCGTCGACGGTGGTAGTAGGCCTGAAGATCTTGTAAGGCTGTCCGATGGCAACCCTGTGGTGGTGGAGATCAGTGAGCCCAAGTGCGTTGAGTATTTGAACAAGATACATGACCAAATTGTTGAGCTAAAACAGAATAGTATCAAAAAAAGAAAAGCAAACTGGTCTGGGCTTCCCACTGAGCTTCTAGAGTCCATCTTGAAAAAGCTTATACCTTCTGAATTTGACATCCTTGGCTTTAGACATATCCTATATTTTAAAGCCGTTTGTCATTCCTGGAGAACCGCTGCAAAATCTTGTAGCTCTTACGTTCCGTTGCCTCGAACTCCGTGTCTCTTGCATCATGAAAACAACTCCTCCCTTTTTGATCCCATAGGAAAGAAGGTGCACAAGATCAGGAACATCTGTGACTTTTTTTCTGAAGCCACCTGGGTCGGTTCATCATATGGGTGGATTGTCATGTTTTACCAAGACGAAGATTTGAAAGAATCAATGGCACATGTTTTTAACCCGATTTCAAGAGCCAGCATTCCGATCCCAGGCACAAAGACCCTTCCTAACTACAACCTTGGAGACCAAATTTCTAAAGCTATTGTTTCGTCTAATCCGTCTAGCTACAACCTTGGAGATCAAATTCCTGAAGGTATTGTTTCGTCCAATCGATCTAGCAACAAGAACTATTTTGTGGTAGTGGAATATGATGGAAATCTAGCATACTATAAGCTTGGAGACGGAGACAAATCATGGAGAAAGTTGGGTGATAATAAGGGTTACAATCCCAAATGTATTATGTTTCACGATGACCAATTAATTGCATTGTCCCAGAGGTTAACTGAGATTTGGAACTTCAAGGAATACCCTCCTCAACAACCTCGGCGTATTGAAGACTCTCCTCCCTACAGATGGGTTGAAGATACCAATTTGGTTGAAGATACTTATTTGGTGGAGTCACTGACGGGTGATATTTTACGTGTGGGAAGAAGTATGCAAAAAGGTAGGGATATGACTTCACAGTTTTTTGTGGAAAAGTTAAACTTAGCAGAAGGAACATGGGAAAATGGGCAAAATTTAGGCGACCAGAGCTTATACCTGTTTCGTGAACATTTAATGTCATTGCCGAACCCATGTTTCTTAGGATGTGAGAAAAACTCAATCTACTTCACAACAACAAAAAACGAATATGGAATATACAATCTTGATGAAGCTATAGAAAGTAGGAAAGGTTCATTTAGTGAAAATGTAAATTTTAATGCTTCTCGTAAACCCTTATGGATTGTTCCTAATCCATGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009719 GO:0009725 GO:0009741 GO:0009742 GO:0009755 GO:0009966 GO:0009967 GO:0009987 GO:0010033 GO:0010646 GO:0010647 GO:0014070 GO:0016567 GO:0016740 GO:0019005 GO:0019538 GO:0019787 GO:0019941 GO:0023051 GO:0023052 GO:0023056 GO:0030163 GO:0031461 GO:0031974 GO:0031981 GO:0032446 GO:0032870 GO:0032991 GO:0033993 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043401 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0048518 GO:0048522 GO:0048545 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0050896 GO:0051603 GO:0051716 GO:0061630 GO:0061659 GO:0065007 GO:0070013 GO:0070647 GO:0070887 GO:0071310 GO:0071367 GO:0071383 GO:0071396 GO:0071407 GO:0071495 GO:0071704 GO:0140096 GO:1900457 GO:1900459 GO:1901564 GO:1901565 GO:1901575 GO:1901700 GO:1901701 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF295 F-box

Protein Analysis

544

Amino Acids

62.55

Weight (kDa)

8.94

Isoelectric Point (pI)

48.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_KIB1-4	PF03478	236 - 512	7.4e-33	KIB1-4 beta-propeller

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000658)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10110 AT1G27540 AT1G27540 AT1G27540 AT1G27580 AT1G67160 AT1G69090 AT2G03560 AT2G03580 AT2G03610 AT2G04810 AT2G04830 AT2G04840 AT2G05970 AT2G14290 AT2G14500 AT2G24080 AT2G33190 AT2G33200 AT3G03726 AT3G03726 AT3G03730 AT3G22333 AT3G22337 AT3G22345 AT4G10820 AT4G12810 AT4G12820 AT4G14165 AT4G17565 AT4G22035 AT4G22060 AT4G22165 AT4G22170 AT4G22180 AT4G22660 AT5G14160 AT5G25290 AT5G25300 AT5G38270 AT5G66830
fragaria_vesca	FvH4_1g02012 FvH4_1g02041 FvH4_1g02212 FvH4_1g02521 FvH4_1g02622 FvH4_1g23804 FvH4_7g23891
rosa_chinensis	RchiOBHm_Chr6g0254461 RchiOBHm_Chr6g0254471 RchiOBHm_Chr6g0254481
rosa_laevigata	RLG00000014912 RLG00000015833 RLG00000015855
rosa_multiflora	Rmu_sc0002296.1_g000011 Rmu_sc0009578.1_g000007 Rmu_sc0009578.1_g000009 Rmu_sc0017669.1_g000012 Rmu_ssc0000481.1_g000005
rosa_roxburghii	Rroxscaffold_1G00018640 Rroxscaffold_2G00153700 Rroxscaffold_7G00210770
rosa_rugosa	Rorug01G0474100.1 Rorug01G0474200
rosa_samantha	Rh2BG027100 Rh2DG027600 Rh2DG027700 Rh5AG407300 Rh5BG420500 Rh6AG069500 Rh6AG069700 Rh6BG062100 Rh6BG062300
rosa_wichuraiana	Rw2G002180 Rw5G038360 Rw6G006110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	3 cut(s)	152, 159, 348
AciI	CCGC	2 cut(s)	342, 627
AclWI	GGATC	2 cut(s)	704, 871
AcsI	RAATTY	5 cut(s)	563, 921, 975, 1408, 1585
AcuI	CTGAAG	7 cut(s)	42, 93, 192, 216, 387, 783, 1002
AcyI	GRCGYC	1 cut(s)	210
AfiI	CCNNNNNNNGG	5 cut(s)	43, 268, 403, 881, 1245
AflIII	ACRYGT	2 cut(s)	841, 1312
AgsI	TTSAA	8 cut(s)	442, 544, 826, 861, 1192, 1226, 1253, 1271
AjnI	CCWGG	3 cut(s)	617, 770, 880
AluBI	AGCT	9 cut(s)	469, 526, 550, 645, 932, 957, 1066, 1425, 1547
AluI	AGCT	9 cut(s)	469, 526, 550, 645, 932, 957, 1066, 1425, 1547
Alw21I	GWGCWC	1 cut(s)	732
Alw26I	GTCTC	6 cut(s)	133, 274, 680, 909, 1065, 1071
Alw44I	GTGCAC	1 cut(s)	728
AlwI	GGATC	2 cut(s)	704, 871
AoxI	GGCC	1 cut(s)	362
ApaLI	GTGCAC	1 cut(s)	728
ApeKI	GCWGC	1 cut(s)	629
ApoI	RAATTY	5 cut(s)	563, 921, 975, 1408, 1585
ArsI	GACNNNNNNTTYG	2 cut(s)	658, 690
AseI	ATTAAT	1 cut(s)	1151
AspLEI	GCGC	1 cut(s)	333
AsuHPI	GGTGA	2 cut(s)	1112, 1313
BaeGI	GKGCMC	2 cut(s)	15, 732
BanII	GRGCYC	1 cut(s)	423
BbsI	GAAGAC	2 cut(s)	81, 1233
Bbv12I	GWGCWC	1 cut(s)	732
BbvI	GCAGC	1 cut(s)	616
BccI	CCATC	5 cut(s)	332, 383, 545, 1037, 1239
BceAI	ACGGC	3 cut(s)	133, 329, 590
BciT130I	CCWGG	3 cut(s)	619, 772, 882
BclI	TGATCA	1 cut(s)	307
BcoDI	GTCTC	6 cut(s)	133, 274, 680, 909, 1065, 1071
BfaI	CTAG	4 cut(s)	530, 954, 1008, 1052
BfmI	CTRYAG	2 cut(s)	1240, 1548
BfoI	RGCGCY	1 cut(s)	334
BglII	AGATCT	1 cut(s)	370
BisI	GCNGC	1 cut(s)	630
BlsI	GCNGC	1 cut(s)	631
Bme1390I	CCNGG	3 cut(s)	619, 772, 882
BmrFI	CCNGG	3 cut(s)	619, 772, 882
BmsI	GCATC	1 cut(s)	691
BpiI	GAAGAC	2 cut(s)	81, 1233
BplI	GAGNNNNNCTC	2 cut(s)	1475, 1507
BpmI	CTGGAG	1 cut(s)	640
Bsa29I	ATCGAT	1 cut(s)	1003
BsaAI	YACGTR	1 cut(s)	1313
BsaBI	GATNNNNATC	1 cut(s)	1047
BsaHI	GRCGYC	1 cut(s)	210
BsaI	GGTCTC	1 cut(s)	909
BsaJI	CCNNGG	8 cut(s)	42, 574, 771, 880, 910, 964, 1214, 1628
BsaXI	ACNNNNNCTCC	2 cut(s)	683, 713
Bsc4I	CCNNNNNNNGG	5 cut(s)	43, 268, 403, 881, 1245
Bse1I	ACTGG	1 cut(s)	509
Bse3DI	GCAATG	1 cut(s)	1454
Bse8I	GATNNNNATC	1 cut(s)	1047
BseBI	CCWGG	3 cut(s)	619, 772, 882
BseCI	ATCGAT	1 cut(s)	1003
BseDI	CCNNGG	8 cut(s)	42, 574, 771, 880, 910, 964, 1214, 1628
BseGI	GGATG	2 cut(s)	570, 1484
BseJI	GATNNNNATC	1 cut(s)	1047
BseLI	CCNNNNNNNGG	5 cut(s)	43, 268, 403, 881, 1245
BseMI	GCAATG	1 cut(s)	1454
BseMII	CTCAG	2 cut(s)	513, 1167
BseNI	ACTGG	1 cut(s)	509
BseRI	GAGGAG	3 cut(s)	688, 1194, 1224
BseSI	GKGCMC	2 cut(s)	15, 732
BseXI	GCAGC	1 cut(s)	616
Bsh1285I	CGRYCG	1 cut(s)	159
BshFI	GGCC	1 cut(s)	364
BshVI	ATCGAT	1 cut(s)	1003
BsiEI	CGRYCG	1 cut(s)	159
BsiHKAI	GWGCWC	1 cut(s)	732
BslFI	GGGAC	1 cut(s)	1147
BslI	CCNNNNNNNGG	5 cut(s)	43, 268, 403, 881, 1245
BsmAI	GTCTC	6 cut(s)	133, 274, 680, 909, 1065, 1071
BsmBI	CGTCTC	1 cut(s)	1065
BsmFI	GGGAC	1 cut(s)	1147
BsmI	GAATGC	2 cut(s)	252, 870
BsnI	GGCC	1 cut(s)	364
Bso31I	GGTCTC	1 cut(s)	909
Bsp1286I	GDGCHC	3 cut(s)	15, 423, 732
Bsp143I	GATC	8 cut(s)	307, 370, 411, 709, 735, 876, 970, 1004
Bsp19I	CCATGG	2 cut(s)	42, 1628
BspACI	CCGC	2 cut(s)	342, 627
BspANI	GGCC	1 cut(s)	364
BspCNI	CTCAG	2 cut(s)	514, 1168
BspDI	ATCGAT	1 cut(s)	1003
BspHI	TCATGA	1 cut(s)	685
BspPI	GGATC	2 cut(s)	704, 871
BspTNI	GGTCTC	1 cut(s)	909
BsrDI	GCAATG	1 cut(s)	1454
BsrI	ACTGG	1 cut(s)	509
BssECI	CCNNGG	8 cut(s)	42, 574, 771, 880, 910, 964, 1214, 1628
BssMI	GATC	8 cut(s)	307, 370, 411, 709, 735, 876, 970, 1004
BssNI	GRCGYC	1 cut(s)	210
BssT1I	CCWWGG	5 cut(s)	42, 574, 910, 964, 1628
Bst2UI	CCWGG	3 cut(s)	619, 772, 882
Bst4CI	ACNGT	3 cut(s)	157, 353, 1356
Bst6I	CTCTTC	1 cut(s)	168
BstACI	GRCGYC	1 cut(s)	210
BstBAI	YACGTR	1 cut(s)	1313
BstC8I	GCNNGC	1 cut(s)	868
BstDEI	CTNAG	4 cut(s)	522, 1176, 1378, 1474
BstDSI	CCRYGG	2 cut(s)	42, 1628
BstENI	CCTNNNNNAGG	1 cut(s)	266
BstF5I	GGATG	2 cut(s)	570, 1484
BstH2I	RGCGCY	1 cut(s)	334
BstHHI	GCGC	1 cut(s)	333
BstKTI	GATC	8 cut(s)	310, 373, 414, 712, 738, 879, 973, 1007
BstMAI	GTCTC	6 cut(s)	133, 274, 680, 909, 1065, 1071
BstMBI	GATC	8 cut(s)	307, 370, 411, 709, 735, 876, 970, 1004
BstMCI	CGRYCG	1 cut(s)	159
BstMWI	GCNNNNNNNGC	1 cut(s)	1422
BstNI	CCWGG	3 cut(s)	619, 772, 882
BstNSI	RCATGY	1 cut(s)	845
BstSCI	CCNGG	3 cut(s)	617, 770, 880
BstSFI	CTRYAG	2 cut(s)	1240, 1548
BstSLI	GKGCMC	2 cut(s)	15, 732
BstV1I	GCAGC	1 cut(s)	616
BstV2I	GAAGAC	2 cut(s)	81, 1233
BstX2I	RGATCY	1 cut(s)	370
BstYI	RGATCY	1 cut(s)	370
Bsu15I	ATCGAT	1 cut(s)	1003
BsuRI	GGCC	1 cut(s)	364
BsuTUI	ATCGAT	1 cut(s)	1003
BtgI	CCRYGG	2 cut(s)	42, 1628
BtsCI	GGATG	2 cut(s)	570, 1484
BtsIMutI	CAGTG	3 cut(s)	421, 519, 1292
Cac8I	GCNNGC	1 cut(s)	868
CciI	TCATGA	1 cut(s)	685
CfoI	GCGC	1 cut(s)	333
ClaI	ATCGAT	1 cut(s)	1003
CseI	GACGC	1 cut(s)	218
DdeI	CTNAG	4 cut(s)	522, 1176, 1378, 1474
DpnI	GATC	8 cut(s)	309, 372, 413, 711, 737, 878, 972, 1006
DpnII	GATC	8 cut(s)	307, 370, 411, 709, 735, 876, 970, 1004
DraI	TTTAAA	1 cut(s)	601
Eam1104I	CTCTTC	1 cut(s)	168
EarI	CTCTTC	1 cut(s)	168
EciI	GGCGGA	1 cut(s)	331
Eco130I	CCWWGG	5 cut(s)	42, 574, 910, 964, 1628
Eco147I	AGGCCT	1 cut(s)	364
Eco24I	GRGCYC	1 cut(s)	423
Eco31I	GGTCTC	1 cut(s)	909
Eco57I	CTGAAG	7 cut(s)	42, 93, 192, 216, 387, 783, 1002
EcoNI	CCTNNNNNAGG	1 cut(s)	266
EcoRII	CCWGG	3 cut(s)	617, 770, 880
EcoT14I	CCWWGG	5 cut(s)	42, 574, 910, 964, 1628
EcoT38I	GRGCYC	1 cut(s)	423
ErhI	CCWWGG	5 cut(s)	42, 574, 910, 964, 1628
Esp3I	CGTCTC	1 cut(s)	1065
FalI	AAGNNNNNCTT	2 cut(s)	1361, 1393
FaqI	GGGAC	1 cut(s)	1147
FauNDI	CATATG	1 cut(s)	787
FbaI	TGATCA	1 cut(s)	307
FblI	GTMKAC	3 cut(s)	152, 159, 348
Fnu4HI	GCNGC	1 cut(s)	630
FokI	GGATG	2 cut(s)	557, 1491
FriOI	GRGCYC	1 cut(s)	423
Fsp4HI	GCNGC	1 cut(s)	630
FspBI	CTAG	4 cut(s)	530, 954, 1008, 1052
GlaI	GCGC	1 cut(s)	332
GluI	GCNGC	1 cut(s)	630
GsuI	CTGGAG	1 cut(s)	640
HaeII	RGCGCY	1 cut(s)	334
HaeIII	GGCC	1 cut(s)	364
HgaI	GACGC	1 cut(s)	218
HhaI	GCGC	1 cut(s)	333
Hin1I	GRCGYC	1 cut(s)	210
Hin6I	GCGC	1 cut(s)	331
HinP1I	GCGC	1 cut(s)	331
HincII	GTYRAC	4 cut(s)	153, 160, 349, 1173
HindII	GTYRAC	4 cut(s)	153, 160, 349, 1173
HindIII	AAGCTT	2 cut(s)	548, 1064
HinfI	GANTC	4 cut(s)	533, 830, 1229, 1289
HpaI	GTTAAC	1 cut(s)	1173
HphI	GGTGA	2 cut(s)	1112, 1313
Hpy166II	GTNNAC	9 cut(s)	124, 153, 160, 316, 349, 730, 1173, 1442, 1604
Hpy188I	TCNGA	5 cut(s)	61, 388, 562, 763, 876
Hpy188III	TCNNGA	9 cut(s)	530, 541, 686, 739, 861, 980, 1139, 1439, 1538
Hpy8I	GTNNAC	9 cut(s)	124, 153, 160, 316, 349, 730, 1173, 1442, 1604
Hpy99I	CGWCG	4 cut(s)	154, 157, 350, 353
HpyAV	CCTTC	8 cut(s)	63, 99, 191, 567, 718, 905, 977, 1379
HpyCH4III	ACNGT	3 cut(s)	157, 353, 1356
HpyCH4IV	ACGT	3 cut(s)	149, 651, 1312
HpyCH4V	TGCA	5 cut(s)	632, 682, 730, 1157, 1330
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1422
HpyF3I	CTNAG	4 cut(s)	522, 1176, 1378, 1474
HpySE526I	ACGT	3 cut(s)	149, 651, 1312
Hsp92I	GRCGYC	1 cut(s)	210
HspAI	GCGC	1 cut(s)	331
Ksp22I	TGATCA	1 cut(s)	307
KspAI	GTTAAC	1 cut(s)	1173
Kzo9I	GATC	8 cut(s)	307, 370, 411, 709, 735, 876, 970, 1004
Lsp1109I	GCAGC	1 cut(s)	616
LweI	GCATC	1 cut(s)	691
MaeI	CTAG	4 cut(s)	530, 954, 1008, 1052
MaeII	ACGT	3 cut(s)	149, 651, 1312
MaeIII	GTNAC	4 cut(s)	67, 749, 1112, 1290
MalI	GATC	8 cut(s)	309, 372, 413, 711, 737, 878, 972, 1006
MboI	GATC	8 cut(s)	307, 370, 411, 709, 735, 876, 970, 1004
MboII	GAAGA	9 cut(s)	48, 86, 185, 380, 830, 1238, 1265, 1283, 1332
MflI	RGATCY	1 cut(s)	370
MhlI	GDGCHC	3 cut(s)	15, 423, 732
MluCI	AATT	9 cut(s)	459, 563, 921, 975, 1148, 1152, 1261, 1408, 1585
MlyI	GAGTC	3 cut(s)	542, 1223, 1298
MnlI	CCTC	9 cut(s)	102, 344, 672, 709, 1161, 1212, 1215, 1224, 1245
MseI	TTAA	8 cut(s)	186, 600, 849, 1151, 1172, 1373, 1448, 1590
MslI	CAYNNNNRTG	1 cut(s)	790
MspA1I	CMGCKG	1 cut(s)	629
MspR9I	CCNGG	3 cut(s)	619, 772, 882
Mva1269I	GAATGC	2 cut(s)	252, 870
MvaI	CCWGG	3 cut(s)	619, 772, 882
MwoI	GCNNNNNNNGC	1 cut(s)	1422
NcoI	CCATGG	2 cut(s)	42, 1628
NdeI	CATATG	1 cut(s)	787
NdeII	GATC	8 cut(s)	307, 370, 411, 709, 735, 876, 970, 1004
NmeAIII	GCCGAG	1 cut(s)	1195
NmuCI	GTSAC	3 cut(s)	67, 749, 1290
NspI	RCATGY	1 cut(s)	845
PagI	TCATGA	1 cut(s)	685
PceI	AGGCCT	1 cut(s)	364
PciI	ACATGT	1 cut(s)	841
PcsI	WCGNNNNNNNCGW	1 cut(s)	947
PctI	GAATGC	2 cut(s)	252, 870
PfeI	GAWTC	1 cut(s)	830
PfoI	TCCNGGA	1 cut(s)	617
PkrI	GCNGC	1 cut(s)	631
PleI	GAGTC	3 cut(s)	541, 1223, 1297
PpsI	GAGTC	3 cut(s)	541, 1223, 1297
Ppu21I	YACGTR	1 cut(s)	1313
PscI	ACATGT	1 cut(s)	841
PshBI	ATTAAT	1 cut(s)	1151
Psp6I	CCWGG	3 cut(s)	617, 770, 880
PspGI	CCWGG	3 cut(s)	617, 770, 880
PsrI	GAACNNNNNNTAC	2 cut(s)	1549, 1581
PsuI	RGATCY	1 cut(s)	370
RseI	CAYNNNNRTG	1 cut(s)	790
SalI	GTCGAC	3 cut(s)	151, 158, 347
SaqAI	TTAA	8 cut(s)	186, 600, 849, 1151, 1172, 1373, 1448, 1590
SatI	GCNGC	1 cut(s)	630
Sau3AI	GATC	8 cut(s)	307, 370, 411, 709, 735, 876, 970, 1004
SchI	GAGTC	3 cut(s)	542, 1223, 1298
ScrFI	CCNGG	3 cut(s)	619, 772, 882
SduI	GDGCHC	3 cut(s)	15, 423, 732
SfaNI	GCATC	1 cut(s)	691
SfcI	CTRYAG	2 cut(s)	1240, 1548
SgrDI	CGTCGACG	2 cut(s)	151, 347
SmiMI	CAYNNNNRTG	1 cut(s)	790
Sse9I	AATT	9 cut(s)	459, 563, 921, 975, 1148, 1152, 1261, 1408, 1585
SseBI	AGGCCT	1 cut(s)	364
SsiI	CCGC	2 cut(s)	342, 627
SspMI	CTAG	4 cut(s)	530, 954, 1008, 1052
StuI	AGGCCT	1 cut(s)	364
StyD4I	CCNGG	3 cut(s)	617, 770, 880
StyI	CCWWGG	5 cut(s)	42, 574, 910, 964, 1628
TaaI	ACNGT	3 cut(s)	157, 353, 1356
TaiI	ACGT	3 cut(s)	152, 654, 1315
TaqI	TCGA	5 cut(s)	152, 159, 348, 664, 1003
TasI	AATT	9 cut(s)	459, 563, 921, 975, 1148, 1152, 1261, 1408, 1585
TfiI	GAWTC	1 cut(s)	830
Tru1I	TTAA	8 cut(s)	186, 600, 849, 1151, 1172, 1373, 1448, 1590
Tru9I	TTAA	8 cut(s)	186, 600, 849, 1151, 1172, 1373, 1448, 1590
TscAI	CASTG	3 cut(s)	421, 526, 1299
TseFI	GTSAC	3 cut(s)	67, 749, 1290
TseI	GCWGC	1 cut(s)	629
Tsp45I	GTSAC	3 cut(s)	67, 749, 1290
TspDTI	ATGAA	5 cut(s)	236, 702, 771, 1557, 1557
TspGWI	ACGGA	4 cut(s)	645, 660, 939, 1089
TspRI	CASTG	3 cut(s)	421, 526, 1299
VneI	GTGCAC	1 cut(s)	728
VspI	ATTAAT	1 cut(s)	1151
XagI	CCTNNNNNAGG	1 cut(s)	266
XapI	RAATTY	5 cut(s)	563, 921, 975, 1408, 1585
XbaI	TCTAGA	1 cut(s)	529
XceI	RCATGY	1 cut(s)	845
XmiI	GTMKAC	3 cut(s)	152, 159, 348
XspI	CTAG	4 cut(s)	530, 954, 1008, 1052

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.