AT4G11521

Cysteine-rich receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0000283
Physical Location & Seq
Forward (+)
6985517 .. 6986819
1303 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G11521.1

Sequence Viewer

Length: 798 bp
ATGATGCTCAATACTTTATTTTTACCAATCTTCTTGTTTTTCCTCATAACCTTTGATTATGTTTCTACACAAACCTGCTTCAATGGATACTTTAAACCAAATGGTACTTACGACTTAAACCGTCGTCGGATCCTCTCTTCTCTTGCTTCCAAAGTCACAGCTCACAACGGCTTCTACAGCTCCACCATCGGCCAAAATCCTAACCAAATGTTCATCATTAGCATGTGCATCCCTGGAACTAAACCAGAGAGATGTTCAGATTGCATCAAAGGCTCAACAGACGGCTTGTTACGAAGCTGTCCTAACCAAACAGTTGGTTATGTATGGCCAGATTGTTGTATGGTACGTTATTCCAACATTTCCTTCTCTGGATCACTCATTATGGAACCGTCTCAACCAGTGTCTGATCCCGCACCTATCGGTGTTGATTTGACATTGTTTGATAGAATATGGGACGAGTTAATGTCTCGTACGATAACTACAGCTTCGAGGACTCATGGATCATTATCATTTGGGCATAAGTACTATGCAGCTGATGTTGCTTCATTGACAACTTTCCAAACTATATACACCATGGTACAATGTACACCGGATGTTTCTTCAGGGGATTGTGAGTTTTGTTTGAAGAGAACTGTTCTTGATTACAAGAAATGTTGTCGCGGTCACATTGGCGGTGCTTTTGTAAGACCATTTTGTTTTATCCGGTGGGATTTGTATCCTTTTGCTGGAGCTTTTGAAAATATTACGTTGCCATCGCCTCCACCACCGCTTTCTTTGACTCCTCCCGTAAGCAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase_Tyr Stress-antifung

Protein Analysis

265

Amino Acids

29.58

Weight (kDa)

7.92

Isoelectric Point (pI)

47.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Stress-antifung PF01657 29 - 119 5.4e-20 Salt stress response/antifungal
Stress-antifung PF01657 147 - 238 1.7e-08 Salt stress response/antifungal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000283)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G45860 AT4G05200 AT4G05200 AT4G11521 AT4G11530 AT4G23130 AT4G23130 AT4G23130 AT4G23140 AT4G23140 AT4G23150 AT4G23160 AT4G23170 AT4G23180 AT4G23180 AT4G23180 AT4G23230 AT4G23270 AT4G23270 AT4G23270 AT4G23280 AT4G23280 AT4G23280 AT4G23310 AT4G23310
fragaria_vesca FvH4_3g02772 FvH4_3g02772 FvH4_3g02773 FvH4_3g02773 FvH4_3g02774 FvH4_3g02800 FvH4_3g02820 FvH4_3g02820 FvH4_3g02830
malus_domestica MD00G1101900.v1.1 MD00G1102100.v1.1 MD00G1102200.v1.1 MD01G1098200.v1.1 MD05G1340000.v1.1 MD05G1340300.v1.1 MD07G1014100.v1.1 MD07G1014300.v1.1 MD07G1014400.v1.1 MD07G1014700.v1.1 MD10G1312900.v1.1 MD11G1022600.v1.1 MD11G1291500.v1.1 MD14G1207100.v1.1 MD16G1096600.v1.1
prunus_persica Prupe.4G027300_v2.0.a1 Prupe.4G027400_v2.0.a1 Prupe.4G027700_v2.0.a1 Prupe.4G027800_v2.0.a1
pyrus_communis pycom05g30960 pycom10g00940 pycom10g00950 pycom10g26430 pycom10g26450 pycom10g26460 pycom10g26470 pycom10g26480 pycom10g26490 pycom10g26500 pycom10g26510 pycom10g26570 pycom11g01820 pycom11g04000 pycom14g17130 pycom14g17140 pycom15g28820
rosa_chinensis RchiOBHm_Chr4g0408141 RchiOBHm_Chr5g0004211 RchiOBHm_Chr5g0004231 RchiOBHm_Chr5g0004241 RchiOBHm_Chr5g0004261
rosa_laevigata RLG00000008668 RLG00000008672 RLG00000031212 RLG00000031217
rosa_multiflora Rmu_co8162658.1_g000001 Rmu_co8336297.1_g000001 Rmu_sc0002073.1_g000001 Rmu_sc0004964.1_g000002 Rmu_sc0004964.1_g000003 Rmu_sc0004964.1_g000007 Rmu_sc0006006.1_g000007 Rmu_sc0007868.1_g000015 Rmu_sc0007868.1_g000016 Rmu_sc0007868.1_g000017 Rmu_sc0007868.1_g000021 Rmu_sc0007868.1_g000023 Rmu_sc0019654.1_g000002 Rmu_sc0038540.1_g000001
rosa_roxburghii Rroxscaffold_1G00071450 Rroxscaffold_1G00071460 Rroxscaffold_1G00071470 Rroxscaffold_1G00071560 Rroxscaffold_1G00071720 Rroxscaffold_1G00071770 Rroxscaffold_5G00352640
rosa_rugosa Rorug04G0083700 Rorug04G0410700 Rorug04G0410800 Rorug04G0410900
rosa_samantha Rh4BG145400 Rh4CG154900 Rh4DG141900 Rh5BG037500 Rh5BG037600 Rh5BG037700 Rh5CG041000 Rh5CG041100 Rh5CG041200 Rh5CG041300 Rh5CG041400 Rh5DG037100
rosa_wichuraiana Rw4G012130 Rw5G003450 Rw5G003460 Rw5G003470 Rw5G003480 Rw5G003640 Rw5G003660 Rw5G003670 Rw5G003680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 83
AccII CGCG 1 cut(s) 660
AciI CCGC 4 cut(s) 411, 660, 672, 767
AclWI GGATC 5 cut(s) 124, 137, 379, 401, 508
AcoI YGGCCR 2 cut(s) 190, 326
AcuI CTGAAG 1 cut(s) 585
AfaI GTAC 6 cut(s) 106, 345, 472, 524, 579, 586
AfiI CCNNNNNNNGG 1 cut(s) 725
AgsI TTSAA 3 cut(s) 82, 625, 737
AjnI CCWGG 1 cut(s) 232
AjuI GAANNNNNNNTTGG 2 cut(s) 347, 379
AluBI AGCT 6 cut(s) 161, 180, 297, 485, 533, 731
AluI AGCT 6 cut(s) 161, 180, 297, 485, 533, 731
Alw26I GTCTC 2 cut(s) 396, 471
AlwI GGATC 5 cut(s) 124, 137, 379, 401, 508
AlwNI CAGNNNCTG 1 cut(s) 404
AoxI GGCC 2 cut(s) 190, 326
ApeKI GCWGC 1 cut(s) 530
BalI TGGCCA 1 cut(s) 328
BamHI GGATCC 1 cut(s) 129
BbvI GCAGC 1 cut(s) 542
BccI CCATC 2 cut(s) 194, 760
BceAI ACGGC 2 cut(s) 184, 298
BciT130I CCWGG 1 cut(s) 234
BciVI GTATCC 2 cut(s) 80, 726
BcoDI GTCTC 2 cut(s) 396, 471
BfmI CTRYAG 2 cut(s) 175, 480
BfuAI ACCTGC 1 cut(s) 83
BfuI GTATCC 2 cut(s) 80, 726
BisI GCNGC 1 cut(s) 531
BlsI GCNGC 1 cut(s) 532
BmcAI AGTACT 1 cut(s) 524
Bme1390I CCNGG 1 cut(s) 234
BmiI GGNNCC 2 cut(s) 131, 387
BmrFI CCNGG 1 cut(s) 234
BmsI GCATC 2 cut(s) 237, 273
BpmI CTGGAG 1 cut(s) 747
BsaBI GATNNNNATC 2 cut(s) 505, 714
BsaJI CCNNGG 2 cut(s) 232, 573
BsaWI WCCGGW 2 cut(s) 589, 702
Bsc4I CCNNNNNNNGG 1 cut(s) 725
Bse1I ACTGG 1 cut(s) 398
Bse8I GATNNNNATC 2 cut(s) 505, 714
BseBI CCWGG 1 cut(s) 234
BseDI CCNNGG 2 cut(s) 232, 573
BseGI GGATG 2 cut(s) 228, 598
BseJI GATNNNNATC 2 cut(s) 505, 714
BseLI CCNNNNNNNGG 1 cut(s) 725
BseNI ACTGG 1 cut(s) 398
BseRI GAGGAG 1 cut(s) 771
BseXI GCAGC 1 cut(s) 542
Bsh1236I CGCG 1 cut(s) 660
BshFI GGCC 2 cut(s) 192, 328
BsiSI CCGG 2 cut(s) 590, 703
BsiWI CGTACG 1 cut(s) 470
BslFI GGGAC 1 cut(s) 467
BslI CCNNNNNNNGG 1 cut(s) 725
BsmAI GTCTC 2 cut(s) 396, 471
BsmBI CGTCTC 1 cut(s) 396
BsmFI GGGAC 1 cut(s) 467
BsnI GGCC 2 cut(s) 192, 328
Bsp1407I TGTACA 1 cut(s) 584
Bsp143I GATC 4 cut(s) 129, 371, 406, 500
Bsp19I CCATGG 1 cut(s) 573
BspACI CCGC 4 cut(s) 411, 660, 672, 767
BspANI GGCC 2 cut(s) 192, 328
BspFNI CGCG 1 cut(s) 660
BspLI GGNNCC 2 cut(s) 131, 387
BspMI ACCTGC 1 cut(s) 83
BspPI GGATC 5 cut(s) 124, 137, 379, 401, 508
BsrGI TGTACA 1 cut(s) 584
BsrI ACTGG 1 cut(s) 398
BssECI CCNNGG 2 cut(s) 232, 573
BssMI GATC 4 cut(s) 129, 371, 406, 500
BssT1I CCWWGG 1 cut(s) 573
Bst2UI CCWGG 1 cut(s) 234
Bst4CI ACNGT 4 cut(s) 122, 313, 390, 634
Bst6I CTCTTC 2 cut(s) 142, 620
BstAUI TGTACA 1 cut(s) 584
BstDSI CCRYGG 1 cut(s) 573
BstF5I GGATG 2 cut(s) 228, 598
BstFNI CGCG 1 cut(s) 660
BstKTI GATC 4 cut(s) 132, 374, 409, 503
BstMAI GTCTC 2 cut(s) 396, 471
BstMBI GATC 4 cut(s) 129, 371, 406, 500
BstMWI GCNNNNNNNGC 3 cut(s) 177, 270, 539
BstNI CCWGG 1 cut(s) 234
BstNSI RCATGY 1 cut(s) 226
BstSCI CCNGG 1 cut(s) 232
BstSFI CTRYAG 2 cut(s) 175, 480
BstUI CGCG 1 cut(s) 660
BstV1I GCAGC 1 cut(s) 542
BstX2I RGATCY 1 cut(s) 129
BstXI CCANNNNNNTGG 1 cut(s) 314
BstYI RGATCY 1 cut(s) 129
BsuI GTATCC 2 cut(s) 80, 726
BsuRI GGCC 2 cut(s) 192, 328
BtgI CCRYGG 1 cut(s) 573
BtgZI GCGATG 1 cut(s) 738
BtsCI GGATG 2 cut(s) 228, 598
BtsIMutI CAGTG 1 cut(s) 405
BveI ACCTGC 1 cut(s) 83
CaiI CAGNNNCTG 1 cut(s) 404
Csp6I GTAC 6 cut(s) 105, 344, 471, 523, 578, 585
CviAII CATG 3 cut(s) 223, 497, 574
CviQI GTAC 6 cut(s) 105, 344, 471, 523, 578, 585
DpnI GATC 4 cut(s) 131, 373, 408, 502
DpnII GATC 4 cut(s) 129, 371, 406, 500
DraI TTTAAA 1 cut(s) 94
EaeI YGGCCR 2 cut(s) 190, 326
Eam1104I CTCTTC 2 cut(s) 142, 620
EarI CTCTTC 2 cut(s) 142, 620
Eco130I CCWWGG 1 cut(s) 573
Eco57I CTGAAG 1 cut(s) 585
EcoRII CCWGG 1 cut(s) 232
EcoT14I CCWWGG 1 cut(s) 573
ErhI CCWWGG 1 cut(s) 573
Esp3I CGTCTC 1 cut(s) 396
FaeI CATG 3 cut(s) 226, 500, 577
FaqI GGGAC 1 cut(s) 467
FatI CATG 3 cut(s) 222, 496, 573
FauI CCCGC 1 cut(s) 418
Fnu4HI GCNGC 1 cut(s) 531
FokI GGATG 2 cut(s) 215, 605
Fsp4HI GCNGC 1 cut(s) 531
GluI GCNGC 1 cut(s) 531
GsuI CTGGAG 1 cut(s) 747
HaeIII GGCC 2 cut(s) 192, 328
HapII CCGG 2 cut(s) 590, 703
Hin1II CATG 3 cut(s) 226, 500, 577
HinfI GANTC 2 cut(s) 493, 778
HpaII CCGG 2 cut(s) 590, 703
Hpy166II GTNNAC 1 cut(s) 587
Hpy188I TCNGA 3 cut(s) 129, 259, 406
Hpy188III TCNNGA 2 cut(s) 369, 638
Hpy8I GTNNAC 1 cut(s) 587
Hpy99I CGWCG 2 cut(s) 126, 129
HpyAV CCTTC 1 cut(s) 373
HpyCH4III ACNGT 4 cut(s) 122, 313, 390, 634
HpyCH4IV ACGT 2 cut(s) 346, 746
HpyCH4V TGCA 3 cut(s) 228, 264, 530
HpyF10VI GCNNNNNNNGC 3 cut(s) 177, 270, 539
HpySE526I ACGT 2 cut(s) 346, 746
Hsp92II CATG 3 cut(s) 226, 500, 577
Kzo9I GATC 4 cut(s) 129, 371, 406, 500
LmnI GCTCC 2 cut(s) 185, 728
Lsp1109I GCAGC 1 cut(s) 542
LweI GCATC 2 cut(s) 237, 273
MaeII ACGT 2 cut(s) 346, 746
MaeIII GTNAC 3 cut(s) 154, 288, 662
MalI GATC 4 cut(s) 131, 373, 408, 502
MboI GATC 4 cut(s) 129, 371, 406, 500
MboII GAAGA 4 cut(s) 22, 129, 591, 637
MflI RGATCY 1 cut(s) 129
MlsI TGGCCA 1 cut(s) 328
MluCI AATT 1 cut(s) 793
MluNI TGGCCA 1 cut(s) 328
MlyI GAGTC 2 cut(s) 487, 772
MmeI TCCRAC 2 cut(s) 107, 378
MnlI CCTC 5 cut(s) 53, 143, 483, 768, 792
Mox20I TGGCCA 1 cut(s) 328
MscI TGGCCA 1 cut(s) 328
MseI TTAA 4 cut(s) 93, 116, 461, 796
MslI CAYNNNNRTG 1 cut(s) 221
Msp20I TGGCCA 1 cut(s) 328
MspA1I CMGCKG 1 cut(s) 533
MspI CCGG 2 cut(s) 590, 703
MspR9I CCNGG 1 cut(s) 234
MvaI CCWGG 1 cut(s) 234
MvnI CGCG 1 cut(s) 660
MwoI GCNNNNNNNGC 3 cut(s) 177, 270, 539
NcoI CCATGG 1 cut(s) 573
NdeII GATC 4 cut(s) 129, 371, 406, 500
NlaIII CATG 3 cut(s) 226, 500, 577
NlaIV GGNNCC 2 cut(s) 131, 387
NmuCI GTSAC 2 cut(s) 154, 662
NspI RCATGY 1 cut(s) 226
Pfl23II CGTACG 1 cut(s) 470
PkrI GCNGC 1 cut(s) 532
PleI GAGTC 2 cut(s) 487, 772
PpsI GAGTC 2 cut(s) 487, 772
Psp6I CCWGG 1 cut(s) 232
PspGI CCWGG 1 cut(s) 232
PspLI CGTACG 1 cut(s) 470
PspN4I GGNNCC 2 cut(s) 131, 387
PstNI CAGNNNCTG 1 cut(s) 404
PsuI RGATCY 1 cut(s) 129
PvuII CAGCTG 1 cut(s) 533
RsaI GTAC 6 cut(s) 106, 345, 472, 524, 579, 586
RsaNI GTAC 6 cut(s) 105, 344, 471, 523, 578, 585
RseI CAYNNNNRTG 1 cut(s) 221
SaqAI TTAA 4 cut(s) 93, 116, 461, 796
SatI GCNGC 1 cut(s) 531
Sau3AI GATC 4 cut(s) 129, 371, 406, 500
ScaI AGTACT 1 cut(s) 524
SchI GAGTC 2 cut(s) 487, 772
ScrFI CCNGG 1 cut(s) 234
SfaNI GCATC 2 cut(s) 237, 273
SfcI CTRYAG 2 cut(s) 175, 480
SmiMI CAYNNNNRTG 1 cut(s) 221
Sse9I AATT 1 cut(s) 793
SsiI CCGC 4 cut(s) 411, 660, 672, 767
SspI AATATT 1 cut(s) 742
StyD4I CCNGG 1 cut(s) 232
StyI CCWWGG 1 cut(s) 573
TaaI ACNGT 4 cut(s) 122, 313, 390, 634
TaiI ACGT 2 cut(s) 349, 749
TaqI TCGA 1 cut(s) 488
TasI AATT 1 cut(s) 793
TatI WGTACW 2 cut(s) 522, 584
Tru1I TTAA 4 cut(s) 93, 116, 461, 796
Tru9I TTAA 4 cut(s) 93, 116, 461, 796
TscAI CASTG 1 cut(s) 405
TseFI GTSAC 2 cut(s) 154, 662
TseI GCWGC 1 cut(s) 530
Tsp45I GTSAC 2 cut(s) 154, 662
TspDTI ATGAA 2 cut(s) 202, 534
TspRI CASTG 1 cut(s) 405
XceI RCATGY 1 cut(s) 226
ZrmI AGTACT 1 cut(s) 524
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.