pycom10g26450

Cysteine-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
Physical Location & Seq
Reverse (-)
27786947 .. 27787648
702 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom10g26450.1

Sequence Viewer

Length: 702 bp
ATGGAAGCAGATTATCTCTACCACGTCTGTCCAAACACCACCACCTTCACCCTAAACTCCACCTTCAAGTCCAACATCAACCGCCTCCTCTCCACCCTCTCCTCCAACGCCAACCGCACCACTGGCTTCTACAACGCCACAATCCAAACCCCAAACAACACCGTCTACGGCCTCTTCCTCTGCCGTGGCGACGTCGTAGGCACCGACGCTTGTGAAACCTGTGTCGCCACCGCAACCGCCGAGGCCCCACAACGCTACCCCGTAGAAAAAGATGTGGTGATCTGGTACGACGACTGCATGCTACGCTACTCCAACGAGTCCTTCTTTTCCAGGGCGGACGACAAGCCGTACGCGTACATGTGGAACACGCAGAATGCAAGTAGTATAACGGACCAATACCGGTTCAATGATGTACTGGCAGCTACGGTCACCGAGGTGGCCGCTCAGACTTCCAATAGCAGTCACAAGTTTGCGACGAAAGAAACGAGTGTTTCAGGTTTCATTACGCTGTACGGATTTGGGCAGTGCAAGCAGGACCTGTTATCTGGAGATTGCAATTGGTGTCTTCTGGAAGCTGCAACACAAATTCCTAGAAGAAATGCTGGGGGACGAATTCTAAAACCCAGTTGCAATCTTAGGTTTGAAGTTTACCCCTTCGATCTCTCCACCCAATCTCTGTTTTCATACCGTGCGACAGTGTGA

Protein Analysis

234

Amino Acids

26.09

Weight (kDa)

5.41

Isoelectric Point (pI)

35.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Stress-antifung PF01657 10 - 106 3e-26 Salt stress response/antifungal
Stress-antifung PF01657 127 - 216 1.8e-08 Salt stress response/antifungal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000283)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G45860 AT4G05200 AT4G05200 AT4G11521 AT4G11530 AT4G23130 AT4G23130 AT4G23130 AT4G23140 AT4G23140 AT4G23150 AT4G23160 AT4G23170 AT4G23180 AT4G23180 AT4G23180 AT4G23230 AT4G23270 AT4G23270 AT4G23270 AT4G23280 AT4G23280 AT4G23280 AT4G23310 AT4G23310
fragaria_vesca FvH4_3g02772 FvH4_3g02772 FvH4_3g02773 FvH4_3g02773 FvH4_3g02774 FvH4_3g02800 FvH4_3g02820 FvH4_3g02820 FvH4_3g02830
malus_domestica MD00G1101900.v1.1 MD00G1102100.v1.1 MD00G1102200.v1.1 MD01G1098200.v1.1 MD05G1340000.v1.1 MD05G1340300.v1.1 MD07G1014100.v1.1 MD07G1014300.v1.1 MD07G1014400.v1.1 MD07G1014700.v1.1 MD10G1312900.v1.1 MD11G1022600.v1.1 MD11G1291500.v1.1 MD14G1207100.v1.1 MD16G1096600.v1.1
prunus_persica Prupe.4G027300_v2.0.a1 Prupe.4G027400_v2.0.a1 Prupe.4G027700_v2.0.a1 Prupe.4G027800_v2.0.a1
pyrus_communis pycom05g30960 pycom10g00940 pycom10g00950 pycom10g26430 pycom10g26450 pycom10g26460 pycom10g26470 pycom10g26480 pycom10g26490 pycom10g26500 pycom10g26510 pycom10g26570 pycom11g01820 pycom11g04000 pycom14g17130 pycom14g17140 pycom15g28820
rosa_chinensis RchiOBHm_Chr4g0408141 RchiOBHm_Chr5g0004211 RchiOBHm_Chr5g0004231 RchiOBHm_Chr5g0004241 RchiOBHm_Chr5g0004261
rosa_laevigata RLG00000008668 RLG00000008672 RLG00000031212 RLG00000031217
rosa_multiflora Rmu_co8162658.1_g000001 Rmu_co8336297.1_g000001 Rmu_sc0002073.1_g000001 Rmu_sc0004964.1_g000002 Rmu_sc0004964.1_g000003 Rmu_sc0004964.1_g000007 Rmu_sc0006006.1_g000007 Rmu_sc0007868.1_g000015 Rmu_sc0007868.1_g000016 Rmu_sc0007868.1_g000017 Rmu_sc0007868.1_g000021 Rmu_sc0007868.1_g000023 Rmu_sc0019654.1_g000002 Rmu_sc0038540.1_g000001
rosa_roxburghii Rroxscaffold_1G00071450 Rroxscaffold_1G00071460 Rroxscaffold_1G00071470 Rroxscaffold_1G00071560 Rroxscaffold_1G00071720 Rroxscaffold_1G00071770 Rroxscaffold_5G00352640
rosa_rugosa Rorug04G0083700 Rorug04G0410700 Rorug04G0410800 Rorug04G0410900
rosa_samantha Rh4BG145400 Rh4CG154900 Rh4DG141900 Rh5BG037500 Rh5BG037600 Rh5BG037700 Rh5CG041000 Rh5CG041100 Rh5CG041200 Rh5CG041300 Rh5CG041400 Rh5DG037100
rosa_wichuraiana Rw4G012130 Rw5G003450 Rw5G003460 Rw5G003470 Rw5G003480 Rw5G003640 Rw5G003660 Rw5G003670 Rw5G003680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 195
AccB1I GGYRCC 1 cut(s) 200
AccBSI CCGCTC 1 cut(s) 443
AccI GTMKAC 1 cut(s) 165
AccII CGCG 1 cut(s) 353
AciI CCGC 6 cut(s) 82, 115, 231, 237, 335, 441
AcoI YGGCCR 1 cut(s) 438
AcsI RAATTY 2 cut(s) 585, 612
AcyI GRCGYC 1 cut(s) 192
AfaI GTAC 5 cut(s) 287, 350, 356, 414, 512
AflIII ACRYGT 2 cut(s) 351, 357
AgeI ACCGGT 1 cut(s) 399
AgsI TTSAA 3 cut(s) 67, 406, 644
AjiI CACGTC 1 cut(s) 25
AjnI CCWGG 1 cut(s) 329
AjuI GAANNNNNNNTTGG 2 cut(s) 305, 337
AleI CACNNNNGTG 1 cut(s) 434
AluBI AGCT 2 cut(s) 422, 575
AluI AGCT 2 cut(s) 422, 575
AlwNI CAGNNNCTG 1 cut(s) 538
AoxI GGCC 3 cut(s) 169, 243, 438
ApeKI GCWGC 2 cut(s) 419, 575
ApoI RAATTY 2 cut(s) 585, 612
AsiGI ACCGGT 1 cut(s) 399
AspS9I GGNCC 3 cut(s) 244, 391, 535
AsuHPI GGTGA 3 cut(s) 40, 289, 421
AvaII GGWCC 2 cut(s) 391, 535
BanI GGYRCC 1 cut(s) 200
BbsI GAAGAC 1 cut(s) 557
BbvI GCAGC 2 cut(s) 431, 562
BceAI ACGGC 3 cut(s) 168, 184, 331
BciT130I CCWGG 1 cut(s) 331
BfaI CTAG 1 cut(s) 591
BisI GCNGC 3 cut(s) 420, 441, 576
BlsI GCNGC 3 cut(s) 421, 442, 577
Bme1390I CCNGG 1 cut(s) 331
Bme18I GGWCC 2 cut(s) 391, 535
BmgBI CACGTC 1 cut(s) 25
BmgT120I GGNCC 3 cut(s) 244, 391, 535
BmiI GGNNCC 2 cut(s) 202, 246
BmrFI CCNGG 1 cut(s) 331
BmrI ACTGGG 1 cut(s) 618
BmuI ACTGGG 1 cut(s) 618
BpiI GAAGAC 1 cut(s) 557
BpmI CTGGAG 1 cut(s) 567
BsaHI GRCGYC 1 cut(s) 192
BsaJI CCNNGG 4 cut(s) 184, 240, 330, 432
BsaWI WCCGGW 1 cut(s) 399
Bse118I RCCGGY 1 cut(s) 399
Bse1I ACTGG 3 cut(s) 127, 420, 624
BseBI CCWGG 1 cut(s) 331
BseDI CCNNGG 4 cut(s) 184, 240, 330, 432
BseMII CTCAG 1 cut(s) 458
BseNI ACTGG 3 cut(s) 127, 420, 624
BseRI GAGGAG 2 cut(s) 77, 91
BseXI GCAGC 2 cut(s) 431, 562
BseYI CCCAGC 1 cut(s) 602
Bsh1236I CGCG 1 cut(s) 353
BshFI GGCC 3 cut(s) 171, 245, 440
BshNI GGYRCC 1 cut(s) 200
BshTI ACCGGT 1 cut(s) 399
BsiSI CCGG 1 cut(s) 400
BsiWI CGTACG 1 cut(s) 348
BslFI GGGAC 1 cut(s) 621
BsmFI GGGAC 1 cut(s) 621
BsmI GAATGC 1 cut(s) 379
BsnI GGCC 3 cut(s) 171, 245, 440
Bsp143I GATC 2 cut(s) 279, 658
BspACI CCGC 6 cut(s) 82, 115, 231, 237, 335, 441
BspANI GGCC 3 cut(s) 171, 245, 440
BspCNI CTCAG 1 cut(s) 457
BspFNI CGCG 1 cut(s) 353
BspLI GGNNCC 2 cut(s) 202, 246
BspT107I GGYRCC 1 cut(s) 200
BsrBI CCGCTC 1 cut(s) 443
BsrFI RCCGGY 1 cut(s) 399
BsrI ACTGG 3 cut(s) 127, 420, 624
BssAI RCCGGY 1 cut(s) 399
BssECI CCNNGG 4 cut(s) 184, 240, 330, 432
BssMI GATC 2 cut(s) 279, 658
BssNI GRCGYC 1 cut(s) 192
Bst2UI CCWGG 1 cut(s) 331
Bst4CI ACNGT 4 cut(s) 163, 427, 689, 697
Bst6I CTCTTC 1 cut(s) 179
BstACI GRCGYC 1 cut(s) 192
BstC8I GCNNGC 2 cut(s) 299, 530
BstDEI CTNAG 2 cut(s) 444, 635
BstDSI CCRYGG 1 cut(s) 184
BstEII GGTNACC 1 cut(s) 427
BstFNI CGCG 1 cut(s) 353
BstKTI GATC 2 cut(s) 282, 661
BstMBI GATC 2 cut(s) 279, 658
BstMWI GCNNNNNNNGC 3 cut(s) 123, 303, 529
BstNI CCWGG 1 cut(s) 331
BstNSI RCATGY 2 cut(s) 301, 361
BstPI GGTNACC 1 cut(s) 427
BstSCI CCNGG 1 cut(s) 329
BstUI CGCG 1 cut(s) 353
BstV1I GCAGC 2 cut(s) 431, 562
BstV2I GAAGAC 1 cut(s) 557
BsuRI GGCC 3 cut(s) 171, 245, 440
BtgI CCRYGG 1 cut(s) 184
BtrI CACGTC 1 cut(s) 25
BtsI GCAGTG 1 cut(s) 530
BtsIMutI CAGTG 3 cut(s) 120, 530, 702
Cac8I GCNNGC 2 cut(s) 299, 530
CaiI CAGNNNCTG 1 cut(s) 538
Cfr10I RCCGGY 1 cut(s) 399
Cfr13I GGNCC 3 cut(s) 244, 391, 535
CseI GACGC 1 cut(s) 215
Csp6I GTAC 5 cut(s) 286, 349, 355, 413, 511
CspAI ACCGGT 1 cut(s) 399
CviAII CATG 2 cut(s) 298, 358
CviJI RGCY 7 cut(s) 126, 171, 245, 346, 422, 440, 575
CviKI_1 RGCY 7 cut(s) 126, 171, 245, 346, 422, 440, 575
CviQI GTAC 5 cut(s) 286, 349, 355, 413, 511
DdeI CTNAG 2 cut(s) 444, 635
DpnI GATC 2 cut(s) 281, 660
DpnII GATC 2 cut(s) 279, 658
EaeI YGGCCR 1 cut(s) 438
Eam1104I CTCTTC 1 cut(s) 179
EarI CTCTTC 1 cut(s) 179
EciI GGCGGA 1 cut(s) 350
Eco47I GGWCC 2 cut(s) 391, 535
Eco91I GGTNACC 1 cut(s) 427
EcoO109I RGGNCCY 2 cut(s) 244, 535
EcoO65I GGTNACC 1 cut(s) 427
EcoRI GAATTC 1 cut(s) 612
EcoRII CCWGG 1 cut(s) 329
FaeI CATG 2 cut(s) 301, 361
FaiI YATR 4 cut(s) 299, 359, 386, 685
FaqI GGGAC 1 cut(s) 621
FatI CATG 2 cut(s) 297, 357
FblI GTMKAC 1 cut(s) 165
Fnu4HI GCNGC 3 cut(s) 420, 441, 576
Fsp4HI GCNGC 3 cut(s) 420, 441, 576
FspBI CTAG 1 cut(s) 591
GluI GCNGC 3 cut(s) 420, 441, 576
GsaI CCCAGC 1 cut(s) 606
GsuI CTGGAG 1 cut(s) 567
HaeIII GGCC 3 cut(s) 171, 245, 440
HapII CCGG 1 cut(s) 400
HgaI GACGC 1 cut(s) 215
Hin1I GRCGYC 1 cut(s) 192
Hin1II CATG 2 cut(s) 301, 361
HinfI GANTC 1 cut(s) 317
HpaII CCGG 1 cut(s) 400
HphI GGTGA 3 cut(s) 40, 289, 421
Hpy166II GTNNAC 2 cut(s) 166, 649
Hpy188I TCNGA 1 cut(s) 447
Hpy188III TCNNGA 2 cut(s) 546, 569
Hpy8I GTNNAC 2 cut(s) 166, 649
Hpy99I CGWCG 5 cut(s) 194, 197, 209, 293, 478
HpyAV CCTTC 4 cut(s) 55, 73, 331, 664
HpyCH4III ACNGT 4 cut(s) 163, 427, 689, 697
HpyCH4IV ACGT 2 cut(s) 24, 192
HpyCH4V TGCA 6 cut(s) 297, 377, 528, 555, 578, 630
HpyF10VI GCNNNNNNNGC 3 cut(s) 123, 303, 529
HpyF3I CTNAG 2 cut(s) 444, 635
HpySE526I ACGT 2 cut(s) 24, 192
Hsp92I GRCGYC 1 cut(s) 192
Hsp92II CATG 2 cut(s) 301, 361
Kzo9I GATC 2 cut(s) 279, 658
Lsp1109I GCAGC 2 cut(s) 431, 562
MaeI CTAG 1 cut(s) 591
MaeII ACGT 2 cut(s) 24, 192
MaeIII GTNAC 2 cut(s) 427, 461
MalI GATC 2 cut(s) 281, 660
MbiI CCGCTC 1 cut(s) 443
MboI GATC 2 cut(s) 279, 658
MboII GAAGA 3 cut(s) 166, 557, 606
MfeI CAATTG 1 cut(s) 556
MluCI AATT 3 cut(s) 556, 585, 612
MluI ACGCGT 1 cut(s) 351
MlyI GAGTC 1 cut(s) 326
MmeI TCCRAC 3 cut(s) 96, 129, 336
MnlI CCTC 8 cut(s) 95, 98, 107, 112, 182, 188, 235, 427
MslI CAYNNNNRTG 1 cut(s) 434
MspI CCGG 1 cut(s) 400
MspR9I CCNGG 1 cut(s) 331
MunI CAATTG 1 cut(s) 556
Mva1269I GAATGC 1 cut(s) 379
MvaI CCWGG 1 cut(s) 331
MvnI CGCG 1 cut(s) 353
MwoI GCNNNNNNNGC 3 cut(s) 123, 303, 529
NdeII GATC 2 cut(s) 279, 658
NlaIII CATG 2 cut(s) 301, 361
NlaIV GGNNCC 2 cut(s) 202, 246
NmeAIII GCCGAG 1 cut(s) 265
NmuCI GTSAC 2 cut(s) 427, 461
NspI RCATGY 2 cut(s) 301, 361
OliI CACNNNNGTG 1 cut(s) 434
PaeI GCATGC 1 cut(s) 301
PciI ACATGT 1 cut(s) 357
PcsI WCGNNNNNNNCGW 2 cut(s) 201, 482
PctI GAATGC 1 cut(s) 379
Pfl23II CGTACG 1 cut(s) 348
PinAI ACCGGT 1 cut(s) 399
PkrI GCNGC 3 cut(s) 421, 442, 577
PleI GAGTC 1 cut(s) 325
PpsI GAGTC 1 cut(s) 325
PpuMI RGGWCCY 1 cut(s) 535
PscI ACATGT 1 cut(s) 357
Psp5II RGGWCCY 1 cut(s) 535
Psp6I CCWGG 1 cut(s) 329
PspEI GGTNACC 1 cut(s) 427
PspFI CCCAGC 1 cut(s) 602
PspGI CCWGG 1 cut(s) 329
PspLI CGTACG 1 cut(s) 348
PspN4I GGNNCC 2 cut(s) 202, 246
PspPI GGNCC 3 cut(s) 244, 391, 535
PspPPI RGGWCCY 1 cut(s) 535
PstNI CAGNNNCTG 1 cut(s) 538
RsaI GTAC 5 cut(s) 287, 350, 356, 414, 512
RsaNI GTAC 5 cut(s) 286, 349, 355, 413, 511
RseI CAYNNNNRTG 1 cut(s) 434
SatI GCNGC 3 cut(s) 420, 441, 576
Sau3AI GATC 2 cut(s) 279, 658
Sau96I GGNCC 3 cut(s) 244, 391, 535
SchI GAGTC 1 cut(s) 326
ScrFI CCNGG 1 cut(s) 331
SinI GGWCC 2 cut(s) 391, 535
SmiMI CAYNNNNRTG 1 cut(s) 434
SphI GCATGC 1 cut(s) 301
Sse9I AATT 3 cut(s) 556, 585, 612
SsiI CCGC 6 cut(s) 82, 115, 231, 237, 335, 441
SspMI CTAG 1 cut(s) 591
StyD4I CCNGG 1 cut(s) 329
TaaI ACNGT 4 cut(s) 163, 427, 689, 697
TaiI ACGT 2 cut(s) 27, 195
TaqI TCGA 1 cut(s) 657
TasI AATT 3 cut(s) 556, 585, 612
TatI WGTACW 1 cut(s) 412
TauI GCSGC 1 cut(s) 443
TscAI CASTG 3 cut(s) 127, 530, 702
TseFI GTSAC 2 cut(s) 427, 461
TseI GCWGC 2 cut(s) 419, 575
Tsp45I GTSAC 2 cut(s) 427, 461
TspDTI ATGAA 2 cut(s) 490, 672
TspGWI ACGGA 2 cut(s) 404, 528
TspRI CASTG 3 cut(s) 127, 530, 702
VpaK11BI GGWCC 2 cut(s) 391, 535
XapI RAATTY 2 cut(s) 585, 612
XceI RCATGY 2 cut(s) 301, 361
XmiI GTMKAC 1 cut(s) 165
XspI CTAG 1 cut(s) 591
ZraI GACGTC 1 cut(s) 193
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.