RchiOBHm_Chr4g0408141

Cysteine-rich receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
OG0000283
Physical Location & Seq
Reverse (-)
30588685 .. 30591332
2648 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ37931

Sequence Viewer

Length: 1959 bp
ATGCCTTCTAATCTGTTCATGGCCCTTGTGGTGCTCCCCATTCTTGGCTTCCTTAGCGTTAGGGTTGAAGCTCAAGCACCAACGTACCTGTATCATATCTGTTCAAACACAACCAGTTTCGCTCCCAACAGCACCTACCAGTCTAATCTTAATCTTCTCCTCTCTTCTCTCACATCCAACGCCACACGTGATATTGGATTCTACTACACCACAGCGGGCGTGCAAAATTCAACTTCAGAAGTAGTTTACGGTTCTTTCCTATGCCGTGGAGATCTCACCCCTGACTTGTGCCAAGAATGTATTACTACTATAGCCAAAGATGGTGTCCAAAAGTACTGCCCCTTGGAAAAAATTTCAATAATATGGTACGATGGGTGCATGTTGCGCTACACAAATCAGTCTTTCTTGAACAGGTTGGACAAAGATCCTCAAATTTCCATGAAACAATCAATTAATGGCTTGGTGGCTCTGGCTTCAAATGCACCATCTGGTGCTAAAAAGTATGCAACGAAAGAAGCACCTTTCACAGGGTTTCAGCAGTTGTACAGCCTTGTTCAGTGCACACCAGACATATCAAGCACAAGTTGTGATACATGTCTTCGAGAAGCTATTGCGCAACTTTCAGGTTGTTGTACTGGAAAGGAAGGTGCTAGAATTTTATCTCCTAGTTGTAATGTTCGATATGAAGTTTATCCATTTTATACAACTGAAGCAGTCACACCTTCACCCCTCCCACAACCTCCGACTCTTCCTCCCCCACCTCCAGGAAAAGACCAAATCTCAACCTTAATCATAGTGGCCATTGTTGTTCCAATTTCCATAGTGCTTTTATTGGTAGGCTGCTTTTTTCTACGAAGAAAGGCAAGAAAAAAGTGTAATGCTTTACAAGAACAAAATGTGGGGAATAAAATTTCCACTGTGAAGTCATTGCAGTTTGATTTTGCTACAATTGAAGCAGCCACAAACCAGTTCTCTGTTAATAACAGATTAGGGGAAGGTGGCTTTGGAGAGGTTTACAAGGGAACCCTTCCTAATGGGCGAGAAATAGCTGTGAAGAGGTTATCCAGAAGCTCCAGGCAAGGTGTCAAGGAGTTTGAAAATGAGGTGGTTTTGGTCGCCAAGCTTCAGCACAGAAATTTAGTAAGGCTACTGGGATTTTGCTCTGAAAGAGAAGAAAAGATACTTATCTATGAACTTGTGCAGAACAAAAGCCTTGACCACTTTTTATTCGACTCGGATATTCAAGTAAAGTTGGATTGGTCAAGCAGATACAAGATTATAGGTGGGATTGCTAGAGGGATTCTCTATCTCCATCAAGATTCTCGGCTTAAAATCATACATCGCGATCTCAAAACAAGCAACATATTGTTAGATGGAGAAATGAACCCAAAAATATCAGATTTTGGAATGGCAAGAATATTTGGAGTTGATCAAACTCAAGGAAGAACTAGAAGGATTGTCGGAACTTATGGTTACATGTCTCCAGAGTATGCAATGCATGGACAGTTCTCAGATAAGTCTGATGTGTATAGTCTTGGTGTCTTAATCTTAGAGATTGTAACAGGCAAGAAAAACACTAAATTCTATCAATCAGACCGTGGCGAAGATCTCTTAACCAATGCTGCTTGGAAACATTGGAGAGATGGGGCAGCAGAAGAATTGTTGGATTCAAATCTGAGATGTTCTTATTCAAGAAATGAAGTAATCAGATGTATCTATATTGGTTTACTGTGTGTTCAGGAAGATCCAAAGGAGAGACCTACCATGCAAACCGTATTTCTCATGCTAAGCAGATACTCGTTCACTATGCCGTTGCCTCAAAAGCCAGCGTTTTTCCTGTATAGTAAAGCAGAATTGAATCTGCCATCAGTAGCCACTGGATCATCATATCAACCCACTAGCAGCTCAGTCTCATGTTCTGTTAATGAAGCTTCGATTACTGAATTATTCCCTCGATAA

Protein Analysis

652

Amino Acids

72.71

Weight (kDa)

8.62

Isoelectric Point (pI)

45.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Stress-antifung PF01657 34 - 133 3.1e-24 Salt stress response/antifungal
Stress-antifung PF01657 158 - 230 7.2e-11 Salt stress response/antifungal
Pkinase PF00069 325 - 592 4.1e-46 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 326 - 592 2.2e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000283)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G45860 AT4G05200 AT4G05200 AT4G11521 AT4G11530 AT4G23130 AT4G23130 AT4G23130 AT4G23140 AT4G23140 AT4G23150 AT4G23160 AT4G23170 AT4G23180 AT4G23180 AT4G23180 AT4G23230 AT4G23270 AT4G23270 AT4G23270 AT4G23280 AT4G23280 AT4G23280 AT4G23310 AT4G23310
fragaria_vesca FvH4_3g02772 FvH4_3g02772 FvH4_3g02773 FvH4_3g02773 FvH4_3g02774 FvH4_3g02800 FvH4_3g02820 FvH4_3g02820 FvH4_3g02830
malus_domestica MD00G1101900.v1.1 MD00G1102100.v1.1 MD00G1102200.v1.1 MD01G1098200.v1.1 MD05G1340000.v1.1 MD05G1340300.v1.1 MD07G1014100.v1.1 MD07G1014300.v1.1 MD07G1014400.v1.1 MD07G1014700.v1.1 MD10G1312900.v1.1 MD11G1022600.v1.1 MD11G1291500.v1.1 MD14G1207100.v1.1 MD16G1096600.v1.1
prunus_persica Prupe.4G027300_v2.0.a1 Prupe.4G027400_v2.0.a1 Prupe.4G027700_v2.0.a1 Prupe.4G027800_v2.0.a1
pyrus_communis pycom05g30960 pycom10g00940 pycom10g00950 pycom10g26430 pycom10g26450 pycom10g26460 pycom10g26470 pycom10g26480 pycom10g26490 pycom10g26500 pycom10g26510 pycom10g26570 pycom11g01820 pycom11g04000 pycom14g17130 pycom14g17140 pycom15g28820
rosa_chinensis RchiOBHm_Chr4g0408141 RchiOBHm_Chr5g0004211 RchiOBHm_Chr5g0004231 RchiOBHm_Chr5g0004241 RchiOBHm_Chr5g0004261
rosa_laevigata RLG00000008668 RLG00000008672 RLG00000031212 RLG00000031217
rosa_multiflora Rmu_co8162658.1_g000001 Rmu_co8336297.1_g000001 Rmu_sc0002073.1_g000001 Rmu_sc0004964.1_g000002 Rmu_sc0004964.1_g000003 Rmu_sc0004964.1_g000007 Rmu_sc0006006.1_g000007 Rmu_sc0007868.1_g000015 Rmu_sc0007868.1_g000016 Rmu_sc0007868.1_g000017 Rmu_sc0007868.1_g000021 Rmu_sc0007868.1_g000023 Rmu_sc0019654.1_g000002 Rmu_sc0038540.1_g000001
rosa_roxburghii Rroxscaffold_1G00071450 Rroxscaffold_1G00071460 Rroxscaffold_1G00071470 Rroxscaffold_1G00071560 Rroxscaffold_1G00071720 Rroxscaffold_1G00071770 Rroxscaffold_5G00352640
rosa_rugosa Rorug04G0083700 Rorug04G0410700 Rorug04G0410800 Rorug04G0410900
rosa_samantha Rh4BG145400 Rh4CG154900 Rh4DG141900 Rh5BG037500 Rh5BG037600 Rh5BG037700 Rh5CG041000 Rh5CG041100 Rh5CG041200 Rh5CG041300 Rh5CG041400 Rh5DG037100
rosa_wichuraiana Rw4G012130 Rw5G003450 Rw5G003460 Rw5G003470 Rw5G003480 Rw5G003640 Rw5G003660 Rw5G003670 Rw5G003680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 615
AccII CGCG 1 cut(s) 1344
AciI CCGC 1 cut(s) 215
AclWI GGATC 3 cut(s) 419, 1739, 1888
AcoI YGGCCR 1 cut(s) 798
AcsI RAATTY 7 cut(s) 226, 351, 432, 654, 909, 1135, 1580
AcuI CTGAAG 3 cut(s) 219, 729, 1109
AcvI CACGTG 1 cut(s) 188
AfaI GTAC 5 cut(s) 86, 335, 368, 545, 634
AfiI CCNNNNNNNGG 3 cut(s) 44, 527, 764
AflIII ACRYGT 3 cut(s) 185, 593, 1476
AjnI CCWGG 2 cut(s) 763, 1073
AjuI GAANNNNNNNTTGG 2 cut(s) 987, 1019
AluBI AGCT 7 cut(s) 71, 608, 1049, 1071, 1123, 1905, 1931
AluI AGCT 7 cut(s) 71, 608, 1049, 1071, 1123, 1905, 1931
Alw21I GWGCWC 2 cut(s) 36, 563
Alw26I GTCTC 3 cut(s) 1485, 1750, 1915
Alw44I GTGCAC 1 cut(s) 559
AlwI GGATC 3 cut(s) 419, 1739, 1888
AoxI GGCC 2 cut(s) 21, 798
ApaLI GTGCAC 1 cut(s) 559
ApeKI GCWGC 5 cut(s) 840, 956, 1622, 1649, 1902
ApoI RAATTY 7 cut(s) 226, 351, 432, 654, 909, 1135, 1580
ArsI GACNNNNNNTTYG 2 cut(s) 309, 341
AseI ATTAAT 1 cut(s) 453
AspLEI GCGC 2 cut(s) 387, 616
AspS9I GGNCC 1 cut(s) 22
AsuHPI GGTGA 2 cut(s) 268, 717
BaeGI GKGCMC 1 cut(s) 563
BaeI ACNNNNGTAYC 2 cut(s) 68, 101
BalI TGGCCA 1 cut(s) 800
BarI GAAGNNNNNNTAC 2 cut(s) 1164, 1196
BbrPI CACGTG 1 cut(s) 188
BbsI GAAGAC 1 cut(s) 590
Bbv12I GWGCWC 2 cut(s) 36, 563
BbvI GCAGC 5 cut(s) 827, 968, 1609, 1661, 1914
BccI CCATC 7 cut(s) 314, 365, 493, 1320, 1367, 1637, 1873
BceAI ACGGC 2 cut(s) 249, 1795
BciT130I CCWGG 2 cut(s) 765, 1075
BclI TGATCA 1 cut(s) 1429
BcoDI GTCTC 3 cut(s) 1485, 1750, 1915
BfaI CTAG 5 cut(s) 651, 666, 1293, 1449, 1899
BfmI CTRYAG 1 cut(s) 309
BglII AGATCT 2 cut(s) 271, 1606
BisI GCNGC 5 cut(s) 841, 957, 1623, 1650, 1903
BlpI GCTNAGC 1 cut(s) 1787
BlsI GCNGC 5 cut(s) 842, 958, 1624, 1651, 1904
BmcAI AGTACT 1 cut(s) 335
Bme1390I CCNGG 2 cut(s) 765, 1075
BmgT120I GGNCC 1 cut(s) 22
BmiI GGNNCC 1 cut(s) 1024
BmrFI CCNGG 2 cut(s) 765, 1075
BmrI ACTGGG 1 cut(s) 1160
BmuI ACTGGG 1 cut(s) 1160
BpiI GAAGAC 1 cut(s) 590
BplI GAGNNNNNCTC 2 cut(s) 1287, 1319
BpmI CTGGAG 3 cut(s) 747, 1057, 1467
Bpu10I CCTNAGC 1 cut(s) 53
Bpu1102I GCTNAGC 1 cut(s) 1787
BpuEI CTTGAG 2 cut(s) 57, 1422
BsaAI YACGTR 1 cut(s) 188
BsaBI GATNNNNATC 2 cut(s) 1184, 1671
BsaI GGTCTC 1 cut(s) 1750
BsaJI CCNNGG 3 cut(s) 265, 342, 1597
BsaXI ACNNNNNCTCC 2 cut(s) 736, 766
Bsc4I CCNNNNNNNGG 3 cut(s) 44, 527, 764
Bse1I ACTGG 6 cut(s) 114, 139, 640, 967, 1155, 1882
Bse3DI GCAATG 2 cut(s) 926, 1500
Bse8I GATNNNNATC 2 cut(s) 1184, 1671
BseBI CCWGG 2 cut(s) 765, 1075
BseDI CCNNGG 3 cut(s) 265, 342, 1597
BseGI GGATG 1 cut(s) 173
BseJI GATNNNNATC 2 cut(s) 1184, 1671
BseLI CCNNNNNNNGG 3 cut(s) 44, 527, 764
BseMI GCAATG 2 cut(s) 926, 1500
BseMII CTCAG 3 cut(s) 1524, 1667, 1920
BseNI ACTGG 6 cut(s) 114, 139, 640, 967, 1155, 1882
BseRI GAGGAG 1 cut(s) 149
BseSI GKGCMC 1 cut(s) 563
BseXI GCAGC 5 cut(s) 827, 968, 1609, 1661, 1914
BsgI GTGCAG 1 cut(s) 1220
Bsh1236I CGCG 1 cut(s) 1344
BshFI GGCC 2 cut(s) 23, 800
BsiHKAI GWGCWC 2 cut(s) 36, 563
BslI CCNNNNNNNGG 3 cut(s) 44, 527, 764
BsmAI GTCTC 3 cut(s) 1485, 1750, 1915
BsnI GGCC 2 cut(s) 23, 800
Bso31I GGTCTC 1 cut(s) 1750
Bsp1286I GDGCHC 2 cut(s) 36, 563
Bsp1407I TGTACA 1 cut(s) 543
Bsp143I GATC 7 cut(s) 271, 424, 1345, 1429, 1606, 1744, 1880
Bsp1720I GCTNAGC 1 cut(s) 1787
Bsp68I TCGCGA 1 cut(s) 1344
BspACI CCGC 1 cut(s) 215
BspANI GGCC 2 cut(s) 23, 800
BspCNI CTCAG 3 cut(s) 1523, 1668, 1919
BspFNI CGCG 1 cut(s) 1344
BspLI GGNNCC 1 cut(s) 1024
BspPI GGATC 3 cut(s) 419, 1739, 1888
BspTNI GGTCTC 1 cut(s) 1750
BsrDI GCAATG 2 cut(s) 926, 1500
BsrGI TGTACA 1 cut(s) 543
BsrI ACTGG 6 cut(s) 114, 139, 640, 967, 1155, 1882
BssECI CCNNGG 3 cut(s) 265, 342, 1597
BssMI GATC 7 cut(s) 271, 424, 1345, 1429, 1606, 1744, 1880
BssT1I CCWWGG 1 cut(s) 342
Bst2UI CCWGG 2 cut(s) 765, 1075
Bst4CI ACNGT 6 cut(s) 251, 919, 1506, 1598, 1731, 1774
Bst6I CTCTTC 3 cut(s) 169, 753, 1049
BstAUI TGTACA 1 cut(s) 543
BstBAI YACGTR 1 cut(s) 188
BstC8I GCNNGC 3 cut(s) 217, 221, 1827
BstDEI CTNAG 6 cut(s) 53, 1510, 1549, 1676, 1787, 1906
BstDSI CCRYGG 2 cut(s) 265, 1597
BstENI CCTNNNNNAGG 1 cut(s) 525
BstF5I GGATG 1 cut(s) 173
BstFNI CGCG 1 cut(s) 1344
BstHHI GCGC 2 cut(s) 387, 616
BstKTI GATC 7 cut(s) 274, 427, 1348, 1432, 1609, 1747, 1883
BstMAI GTCTC 3 cut(s) 1485, 1750, 1915
BstMBI GATC 7 cut(s) 271, 424, 1345, 1429, 1606, 1744, 1880
BstMWI GCNNNNNNNGC 4 cut(s) 54, 384, 479, 1822
BstNI CCWGG 2 cut(s) 765, 1075
BstNSI RCATGY 3 cut(s) 382, 597, 1480
BstSCI CCNGG 2 cut(s) 763, 1073
BstSFI CTRYAG 1 cut(s) 309
BstSLI GKGCMC 1 cut(s) 563
BstUI CGCG 1 cut(s) 1344
BstV1I GCAGC 5 cut(s) 827, 968, 1609, 1661, 1914
BstV2I GAAGAC 1 cut(s) 590
BstX2I RGATCY 4 cut(s) 271, 424, 1606, 1744
BstYI RGATCY 4 cut(s) 271, 424, 1606, 1744
BsuRI GGCC 2 cut(s) 23, 800
BtgI CCRYGG 2 cut(s) 265, 1597
BtgZI GCGATG 1 cut(s) 1325
BtsCI GGATG 1 cut(s) 173
BtsIMutI CAGTG 3 cut(s) 563, 915, 1875
BtuMI TCGCGA 1 cut(s) 1344
Cac8I GCNNGC 3 cut(s) 217, 221, 1827
CfoI GCGC 2 cut(s) 387, 616
Cfr13I GGNCC 1 cut(s) 22
Csp6I GTAC 5 cut(s) 85, 334, 367, 544, 633
CviAII CATG 9 cut(s) 19, 379, 439, 594, 1477, 1499, 1765, 1783, 1914
CviQI GTAC 5 cut(s) 85, 334, 367, 544, 633
DdeI CTNAG 6 cut(s) 53, 1510, 1549, 1676, 1787, 1906
DpnI GATC 7 cut(s) 273, 426, 1347, 1431, 1608, 1746, 1882
DpnII GATC 7 cut(s) 271, 424, 1345, 1429, 1606, 1744, 1880
EaeI YGGCCR 1 cut(s) 798
Eam1104I CTCTTC 3 cut(s) 169, 753, 1049
EarI CTCTTC 3 cut(s) 169, 753, 1049
Eco130I CCWWGG 1 cut(s) 342
Eco31I GGTCTC 1 cut(s) 1750
Eco57I CTGAAG 3 cut(s) 219, 729, 1109
Eco72I CACGTG 1 cut(s) 188
EcoNI CCTNNNNNAGG 1 cut(s) 525
EcoRII CCWGG 2 cut(s) 763, 1073
EcoT14I CCWWGG 1 cut(s) 342
EcoT22I ATGCAT 1 cut(s) 1500
ErhI CCWWGG 1 cut(s) 342
FaeI CATG 9 cut(s) 22, 382, 442, 597, 1480, 1502, 1768, 1786, 1917
FatI CATG 9 cut(s) 18, 378, 438, 593, 1476, 1498, 1764, 1782, 1913
FauI CCCGC 1 cut(s) 208
FbaI TGATCA 1 cut(s) 1429
Fnu4HI GCNGC 5 cut(s) 841, 957, 1623, 1650, 1903
FokI GGATG 1 cut(s) 160
Fsp4HI GCNGC 5 cut(s) 841, 957, 1623, 1650, 1903
FspBI CTAG 5 cut(s) 651, 666, 1293, 1449, 1899
FspI TGCGCA 1 cut(s) 615
GlaI GCGC 2 cut(s) 386, 615
GluI GCNGC 5 cut(s) 841, 957, 1623, 1650, 1903
GsuI CTGGAG 3 cut(s) 747, 1057, 1467
HaeIII GGCC 2 cut(s) 23, 800
HhaI GCGC 2 cut(s) 387, 616
Hin1II CATG 9 cut(s) 22, 382, 442, 597, 1480, 1502, 1768, 1786, 1917
Hin6I GCGC 2 cut(s) 385, 614
HinP1I GCGC 2 cut(s) 385, 614
HindIII AAGCTT 2 cut(s) 1121, 1929
HinfI GANTC 7 cut(s) 198, 745, 1232, 1300, 1319, 1667, 1858
HphI GGTGA 2 cut(s) 268, 717
Hpy166II GTNNAC 5 cut(s) 247, 561, 1015, 1727, 1803
Hpy188III TCNNGA 8 cut(s) 406, 602, 1065, 1316, 1343, 1484, 1692, 1739
Hpy8I GTNNAC 5 cut(s) 247, 561, 1015, 1727, 1803
HpyAV CCTTC 6 cut(s) 15, 638, 732, 989, 1037, 1446
HpyCH4III ACNGT 6 cut(s) 251, 919, 1506, 1598, 1731, 1774
HpyCH4IV ACGT 2 cut(s) 83, 187
HpyF10VI GCNNNNNNNGC 4 cut(s) 54, 384, 479, 1822
HpyF3I CTNAG 6 cut(s) 53, 1510, 1549, 1676, 1787, 1906
HpySE526I ACGT 2 cut(s) 83, 187
Hsp92II CATG 9 cut(s) 22, 382, 442, 597, 1480, 1502, 1768, 1786, 1917
HspAI GCGC 2 cut(s) 385, 614
Ksp22I TGATCA 1 cut(s) 1429
Kzo9I GATC 7 cut(s) 271, 424, 1345, 1429, 1606, 1744, 1880
LmnI GCTCC 3 cut(s) 39, 127, 1076
Lsp1109I GCAGC 5 cut(s) 827, 968, 1609, 1661, 1914
MaeI CTAG 5 cut(s) 651, 666, 1293, 1449, 1899
MaeII ACGT 2 cut(s) 83, 187
MaeIII GTNAC 3 cut(s) 715, 1472, 1558
MalI GATC 7 cut(s) 273, 426, 1347, 1431, 1608, 1746, 1882
MboI GATC 7 cut(s) 271, 424, 1345, 1429, 1606, 1744, 1880
MfeI CAATTG 1 cut(s) 948
MflI RGATCY 4 cut(s) 271, 424, 1606, 1744
MhlI GDGCHC 2 cut(s) 36, 563
MlsI TGGCCA 1 cut(s) 800
MluNI TGGCCA 1 cut(s) 800
MlyI GAGTC 2 cut(s) 739, 1226
MmeI TCCRAC 6 cut(s) 201, 396, 767, 1233, 1441, 1644
Mox20I TGGCCA 1 cut(s) 800
Mph1103I ATGCAT 1 cut(s) 1500
MscI TGGCCA 1 cut(s) 800
MseI TTAA 8 cut(s) 150, 453, 788, 978, 1329, 1544, 1613, 1923
Msp20I TGGCCA 1 cut(s) 800
MspA1I CMGCKG 1 cut(s) 215
MspR9I CCNGG 2 cut(s) 765, 1075
MunI CAATTG 1 cut(s) 948
MvaI CCWGG 2 cut(s) 765, 1075
MvnI CGCG 1 cut(s) 1344
MwoI GCNNNNNNNGC 4 cut(s) 54, 384, 479, 1822
NdeII GATC 7 cut(s) 271, 424, 1345, 1429, 1606, 1744, 1880
NlaIII CATG 9 cut(s) 22, 382, 442, 597, 1480, 1502, 1768, 1786, 1917
NlaIV GGNNCC 1 cut(s) 1024
NmeAIII GCCGAG 1 cut(s) 1303
NmuCI GTSAC 1 cut(s) 715
NruI TCGCGA 1 cut(s) 1344
NsbI TGCGCA 1 cut(s) 615
NsiI ATGCAT 1 cut(s) 1500
NspI RCATGY 3 cut(s) 382, 597, 1480
PciI ACATGT 2 cut(s) 593, 1476
PfeI GAWTC 5 cut(s) 198, 1300, 1319, 1667, 1858
PfoI TCCNGGA 1 cut(s) 763
PkrI GCNGC 5 cut(s) 842, 958, 1624, 1651, 1904
PleI GAGTC 2 cut(s) 739, 1226
PmaCI CACGTG 1 cut(s) 188
PmlI CACGTG 1 cut(s) 188
PpsI GAGTC 2 cut(s) 739, 1226
Ppu21I YACGTR 1 cut(s) 188
PscI ACATGT 2 cut(s) 593, 1476
PshBI ATTAAT 1 cut(s) 453
Psp6I CCWGG 2 cut(s) 763, 1073
PspCI CACGTG 1 cut(s) 188
PspGI CCWGG 2 cut(s) 763, 1073
PspN4I GGNNCC 1 cut(s) 1024
PspPI GGNCC 1 cut(s) 22
PsuI RGATCY 4 cut(s) 271, 424, 1606, 1744
RruI TCGCGA 1 cut(s) 1344
RsaI GTAC 5 cut(s) 86, 335, 368, 545, 634
RsaNI GTAC 5 cut(s) 85, 334, 367, 544, 633
SaqAI TTAA 8 cut(s) 150, 453, 788, 978, 1329, 1544, 1613, 1923
SatI GCNGC 5 cut(s) 841, 957, 1623, 1650, 1903
Sau3AI GATC 7 cut(s) 271, 424, 1345, 1429, 1606, 1744, 1880
Sau96I GGNCC 1 cut(s) 22
ScaI AGTACT 1 cut(s) 335
SchI GAGTC 2 cut(s) 739, 1226
ScrFI CCNGG 2 cut(s) 765, 1075
SduI GDGCHC 2 cut(s) 36, 563
SfcI CTRYAG 1 cut(s) 309
SmlI CTYRAG 2 cut(s) 72, 1437
SmoI CTYRAG 2 cut(s) 72, 1437
SsiI CCGC 1 cut(s) 215
SspI AATATT 1 cut(s) 1419
SspMI CTAG 5 cut(s) 651, 666, 1293, 1449, 1899
StyD4I CCNGG 2 cut(s) 763, 1073
StyI CCWWGG 1 cut(s) 342
TaaI ACNGT 6 cut(s) 251, 919, 1506, 1598, 1731, 1774
TaiI ACGT 2 cut(s) 86, 190
TaqI TCGA 5 cut(s) 601, 679, 1230, 1934, 1954
TatI WGTACW 3 cut(s) 333, 543, 632
TfiI GAWTC 5 cut(s) 198, 1300, 1319, 1667, 1858
Tru1I TTAA 8 cut(s) 150, 453, 788, 978, 1329, 1544, 1613, 1923
Tru9I TTAA 8 cut(s) 150, 453, 788, 978, 1329, 1544, 1613, 1923
TscAI CASTG 3 cut(s) 563, 922, 1882
TseFI GTSAC 1 cut(s) 715
TseI GCWGC 5 cut(s) 840, 956, 1622, 1649, 1902
Tsp45I GTSAC 1 cut(s) 715
TspDTI ATGAA 7 cut(s) 7, 455, 699, 1206, 1397, 1713, 1941
TspRI CASTG 3 cut(s) 563, 922, 1882
VneI GTGCAC 1 cut(s) 559
VspI ATTAAT 1 cut(s) 453
XagI CCTNNNNNAGG 1 cut(s) 525
XapI RAATTY 7 cut(s) 226, 351, 432, 654, 909, 1135, 1580
XceI RCATGY 3 cut(s) 382, 597, 1480
XspI CTAG 5 cut(s) 651, 666, 1293, 1449, 1899
ZrmI AGTACT 1 cut(s) 335
Zsp2I ATGCAT 1 cut(s) 1500
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.