Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0007868.1

Orthogroup ID

OG0000283

Physical Location & Seq

Genomic Coordinates Forward (+)

75755 .. 78489

Gene Structure 2735 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0007868.1_g000021.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1830 bp

atggatcagaaacagatcaacataatgccaagttgttctcatcatgtgttcatcatgtcctttgtgttgctcttcattcttggtttccatagcctcagcatcgaagctgaagatgaagctgaagctatacctgtagttggtggctactcccgttcctgttcaaacacaacaactttcactccgaacagcacttaccagttcaatctcaatctcctcctctcctatctcacctccaacgccaccaatgacctcagattttacaacaccacagtcggcgcccaagaccccggcacgactgtttacggttcatttagttgccgtggcgatgtcacccctgaaatatgtcaacaatgcgtgtctgctatagccacagaaggagtccaaaattattgccccttgagcaaaatctcaataatatggtatgcagattgcatgttacgctactcaaacacatccttctttggcaacccggagacatctcctcaagtttccttcttcaacacggggaatatcactgagcctgaccgcttcatgccgctgctgggacaaactctgaagagcttggtgggacctgctgctggtgcaccttcaggtgtgaaaaaattcgcaacaaaagaagtgaacttcacagattttcagcagttgtacacccttgtgcagtgcacaccagacctatcgagcctaggttgtgaaagatgtcttacagcagctattgcagctattccagtttctttttatggaaagcaagggggagtagtcttatttcctactgtttatgttcgatatgaaatctatccattttacacagttcaagctgccacacctccaccagcgccatcgccaccatcactgcttcttcctccccctcctccaggttcagtaacgagatctcaaggaaacgacaaaatctcatccttgatcatagtggccattgttgttccagttgccttggtgcttttcttggttggctgcttttttctaagaagaaagacaagaaaaaaatatgatgctttacagggacagaatggggataatgaaattactaatgtggagtcattgcagtttgattttgctacaattgaagcagccacaaaccagttctctgttaataatagattaggggaaggtggctttggagaggtttacaagggaacacttcctaatgggcaagaaatagctgtgaagaggttatctagaagctctgggcaaggtgtcatggaatttaagaatgaggtggttttggtagccaagcttcagcacagaaatttagtgaggctactgggattttgctctgaaggagaagaaaagattcttatctatgaacttgtgcagaacaaaagccttgaccactttttattcgagtatgcaatgcatggacagttctcagagaagtctgatgtgtacagtcttggtgtcttaatcttagagattgtaacaggcaagaaaaacactagtttctatcaatcagaccgtggcgaagatctcttaacatatgcttggaaacattggagagaagggacggtggaagaattgttggattcaaatctgagatgttcttattcaagaaatgaagtaatcagatgtatccatattggtttactgtgtgttcaggaggatccaaaggagagacctactatgcaaaccattgttctcatgctaagcagttactcagtttctatgcctttgcctgagaagccagcgtttttcctgcatagtaaggcagagttgaacatgccatcagtagcctctggatcatcatatcaacccactagcagctcagtctcatgttctgttaatgatgtttcaattactgaattattccctcgataa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009617 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0042742 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050896 GO:0051704 GO:0051707 GO:0071704 GO:0071944 GO:0098542 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase_Tyr Stress-antifung

Protein Analysis

609

Amino Acids

67.26

Weight (kDa)

5.62

Isoelectric Point (pI)

47.52

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000283)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G45860 AT4G05200 AT4G05200 AT4G11521 AT4G11530 AT4G23130 AT4G23130 AT4G23130 AT4G23140 AT4G23140 AT4G23150 AT4G23160 AT4G23170 AT4G23180 AT4G23180 AT4G23180 AT4G23230 AT4G23270 AT4G23270 AT4G23270 AT4G23280 AT4G23280 AT4G23280 AT4G23310 AT4G23310
fragaria_vesca	FvH4_3g02772 FvH4_3g02772 FvH4_3g02773 FvH4_3g02773 FvH4_3g02774 FvH4_3g02800 FvH4_3g02820 FvH4_3g02820 FvH4_3g02830
malus_domestica	MD00G1101900.v1.1 MD00G1102100.v1.1 MD00G1102200.v1.1 MD01G1098200.v1.1 MD05G1340000.v1.1 MD05G1340300.v1.1 MD07G1014100.v1.1 MD07G1014300.v1.1 MD07G1014400.v1.1 MD07G1014700.v1.1 MD10G1312900.v1.1 MD11G1022600.v1.1 MD11G1291500.v1.1 MD14G1207100.v1.1 MD16G1096600.v1.1
prunus_persica	Prupe.4G027300_v2.0.a1 Prupe.4G027400_v2.0.a1 Prupe.4G027700_v2.0.a1 Prupe.4G027800_v2.0.a1
pyrus_communis	pycom05g30960 pycom10g00940 pycom10g00950 pycom10g26430 pycom10g26450 pycom10g26460 pycom10g26470 pycom10g26480 pycom10g26490 pycom10g26500 pycom10g26510 pycom10g26570 pycom11g01820 pycom11g04000 pycom14g17130 pycom14g17140 pycom15g28820
rosa_chinensis	RchiOBHm_Chr4g0408141 RchiOBHm_Chr5g0004211 RchiOBHm_Chr5g0004231 RchiOBHm_Chr5g0004241 RchiOBHm_Chr5g0004261
rosa_laevigata	RLG00000008668 RLG00000008672 RLG00000031212 RLG00000031217
rosa_multiflora	Rmu_co8162658.1_g000001 Rmu_co8336297.1_g000001 Rmu_sc0002073.1_g000001 Rmu_sc0004964.1_g000002 Rmu_sc0004964.1_g000003 Rmu_sc0004964.1_g000007 Rmu_sc0006006.1_g000007 Rmu_sc0007868.1_g000015 Rmu_sc0007868.1_g000016 Rmu_sc0007868.1_g000017 Rmu_sc0007868.1_g000021 Rmu_sc0007868.1_g000023 Rmu_sc0019654.1_g000002 Rmu_sc0038540.1_g000001
rosa_roxburghii	Rroxscaffold_1G00071450 Rroxscaffold_1G00071460 Rroxscaffold_1G00071470 Rroxscaffold_1G00071560 Rroxscaffold_1G00071720 Rroxscaffold_1G00071770 Rroxscaffold_5G00352640
rosa_rugosa	Rorug04G0083700 Rorug04G0410700 Rorug04G0410800 Rorug04G0410900
rosa_samantha	Rh4BG145400 Rh4CG154900 Rh4DG141900 Rh5BG037500 Rh5BG037600 Rh5BG037700 Rh5CG041000 Rh5CG041100 Rh5CG041200 Rh5CG041300 Rh5CG041400 Rh5DG037100
rosa_wichuraiana	Rw4G012130 Rw5G003450 Rw5G003460 Rw5G003470 Rw5G003480 Rw5G003640 Rw5G003660 Rw5G003670 Rw5G003680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	580
AccB1I	GGYRCC	1 cut(s)	275
AciI	CCGC	2 cut(s)	526, 536
AclWI	GGATC	4 cut(s)	12, 1610, 1623, 1759
AcoI	YGGCCR	1 cut(s)	927
AcsI	RAATTY	3 cut(s)	602, 1220, 1264
AcuI	CTGAAG	6 cut(s)	129, 141, 573, 575, 1238, 1314
AcyI	GRCGYC	1 cut(s)	276
AfaI	GTAC	2 cut(s)	647, 1403
AfiI	CCNNNNNNNGG	4 cut(s)	137, 542, 578, 872
AgsI	TTSAA	9 cut(s)	162, 202, 499, 812, 1082, 1542, 1563, 1729, 1806
AhlI	ACTAGT	1 cut(s)	1451
AjnI	CCWGG	1 cut(s)	871
AjuI	GAANNNNNNNTTGG	2 cut(s)	1116, 1148
AleI	CACNNNNGTG	1 cut(s)	653
Alw21I	GWGCWC	2 cut(s)	586, 665
Alw26I	GTCTC	3 cut(s)	467, 1621, 1786
Alw44I	GTGCAC	2 cut(s)	582, 661
AlwI	GGATC	4 cut(s)	12, 1610, 1623, 1759
AoxI	GGCC	1 cut(s)	927
ApaLI	GTGCAC	2 cut(s)	582, 661
ApeKI	GCWGC	8 cut(s)	538, 575, 707, 716, 815, 969, 1085, 1773
ApoI	RAATTY	3 cut(s)	602, 1220, 1264
Asp700I	GAANNNNTTC	2 cut(s)	602, 1308
AspA2I	CCTAGG	1 cut(s)	682
AspLEI	GCGC	2 cut(s)	278, 835
AspS9I	GGNCC	1 cut(s)	569
AsuC2I	CCSGG	2 cut(s)	288, 470
AsuHPI	GGTGA	2 cut(s)	220, 322
AvaII	GGWCC	1 cut(s)	569
AvrII	CCTAGG	1 cut(s)	682
BaeGI	GKGCMC	2 cut(s)	586, 665
BalI	TGGCCA	1 cut(s)	929
BamHI	GGATCC	1 cut(s)	1615
BanI	GGYRCC	1 cut(s)	275
BarI	GAAGNNNNNNTAC	2 cut(s)	1236, 1268
Bbv12I	GWGCWC	2 cut(s)	586, 665
BbvCI	CCTCAGC	1 cut(s)	95
BbvI	GCAGC	8 cut(s)	525, 562, 719, 728, 802, 956, 1097, 1785
BccI	CCATC	3 cut(s)	844, 853, 1744
BceAI	ACGGC	1 cut(s)	303
BciT130I	CCWGG	1 cut(s)	873
BciVI	GTATCC	1 cut(s)	1595
BclI	TGATCA	1 cut(s)	918
BcnI	CCSGG	2 cut(s)	288, 470
BcoDI	GTCTC	3 cut(s)	467, 1621, 1786
BcuI	ACTAGT	1 cut(s)	1451
BfaI	CTAG	4 cut(s)	683, 1194, 1452, 1770
BfmI	CTRYAG	2 cut(s)	132, 363
BfoI	RGCGCY	2 cut(s)	279, 836
BfuAI	ACCTGC	1 cut(s)	580
BfuI	GTATCC	1 cut(s)	1595
BglII	AGATCT	2 cut(s)	887, 1480
BisI	GCNGC	9 cut(s)	536, 539, 576, 708, 717, 816, 970, 1086, 1774
BlnI	CCTAGG	1 cut(s)	682
BlpI	GCTNAGC	1 cut(s)	1658
BlsI	GCNGC	9 cut(s)	537, 540, 577, 709, 718, 817, 971, 1087, 1775
Bme1390I	CCNGG	3 cut(s)	288, 470, 873
Bme18I	GGWCC	1 cut(s)	569
BmgT120I	GGNCC	1 cut(s)	569
BmiI	GGNNCC	3 cut(s)	277, 570, 1617
BmrFI	CCNGG	3 cut(s)	288, 470, 873
BmrI	ACTGGG	1 cut(s)	1289
BmsI	GCATC	2 cut(s)	108, 997
BmuI	ACTGGG	1 cut(s)	1289
BpmI	CTGGAG	1 cut(s)	855
Bpu10I	CCTNAGC	1 cut(s)	95
Bpu1102I	GCTNAGC	1 cut(s)	1658
BpuEI	CTTGAG	3 cut(s)	418, 468, 876
BpuMI	CCSGG	2 cut(s)	288, 470
BsaBI	GATNNNNATC	2 cut(s)	1313, 1542
BsaHI	GRCGYC	1 cut(s)	276
BsaI	GGTCTC	1 cut(s)	1621
BsaJI	CCNNGG	5 cut(s)	286, 319, 682, 948, 1471
BsaXI	ACNNNNNCTCC	2 cut(s)	163, 193
Bsc4I	CCNNNNNNNGG	4 cut(s)	137, 542, 578, 872
Bse1I	ACTGG	5 cut(s)	196, 725, 941, 1096, 1284
Bse3DI	GCAATG	2 cut(s)	1055, 1374
Bse8I	GATNNNNATC	2 cut(s)	1313, 1542
BseBI	CCWGG	1 cut(s)	873
BseDI	CCNNGG	5 cut(s)	286, 319, 682, 948, 1471
BseGI	GGATG	2 cut(s)	452, 911
BseJI	GATNNNNATC	2 cut(s)	1313, 1542
BseLI	CCNNNNNNNGG	4 cut(s)	137, 542, 578, 872
BseMI	GCAATG	2 cut(s)	1055, 1374
BseMII	CTCAG	8 cut(s)	109, 265, 507, 1398, 1538, 1680, 1683, 1791
BseNI	ACTGG	5 cut(s)	196, 725, 941, 1096, 1284
BseRI	GAGGAG	4 cut(s)	203, 206, 471, 858
BseSI	GKGCMC	2 cut(s)	586, 665
BseXI	GCAGC	8 cut(s)	525, 562, 719, 728, 802, 956, 1097, 1785
BseYI	CCCAGC	1 cut(s)	541
BsgI	GTGCAG	2 cut(s)	677, 1349
BshFI	GGCC	1 cut(s)	929
BshNI	GGYRCC	1 cut(s)	275
BsiHKAI	GWGCWC	2 cut(s)	586, 665
BsiSI	CCGG	2 cut(s)	288, 470
BslFI	GGGAC	4 cut(s)	558, 582, 1032, 1531
BslI	CCNNNNNNNGG	4 cut(s)	137, 542, 578, 872
BsmAI	GTCTC	3 cut(s)	467, 1621, 1786
BsmFI	GGGAC	4 cut(s)	558, 582, 1032, 1531
BsnI	GGCC	1 cut(s)	929
Bso31I	GGTCTC	1 cut(s)	1621
Bsp1286I	GDGCHC	2 cut(s)	586, 665
Bsp1407I	TGTACA	2 cut(s)	645, 1401
Bsp143I	GATC	7 cut(s)	4, 15, 887, 918, 1480, 1615, 1751
Bsp1720I	GCTNAGC	1 cut(s)	1658
BspACI	CCGC	2 cut(s)	526, 536
BspANI	GGCC	1 cut(s)	929
BspCNI	CTCAG	8 cut(s)	108, 264, 508, 1397, 1539, 1681, 1682, 1790
BspLI	GGNNCC	3 cut(s)	277, 570, 1617
BspMI	ACCTGC	1 cut(s)	580
BspPI	GGATC	4 cut(s)	12, 1610, 1623, 1759
BspQI	GCTCTTC	2 cut(s)	77, 551
BspT107I	GGYRCC	1 cut(s)	275
BspTNI	GGTCTC	1 cut(s)	1621
BsrDI	GCAATG	2 cut(s)	1055, 1374
BsrGI	TGTACA	2 cut(s)	645, 1401
BsrI	ACTGG	5 cut(s)	196, 725, 941, 1096, 1284
BssECI	CCNNGG	5 cut(s)	286, 319, 682, 948, 1471
BssMI	GATC	7 cut(s)	4, 15, 887, 918, 1480, 1615, 1751
BssNI	GRCGYC	1 cut(s)	276
BssT1I	CCWWGG	2 cut(s)	682, 948
Bst2UI	CCWGG	1 cut(s)	873
Bst6I	CTCTTC	3 cut(s)	77, 551, 1178
BstACI	GRCGYC	1 cut(s)	276
BstAPI	GCANNNNNTGC	1 cut(s)	713
BstAUI	TGTACA	2 cut(s)	645, 1401
BstC8I	GCNNGC	1 cut(s)	1698
BstDSI	CCRYGG	2 cut(s)	319, 1471
BstENI	CCTNNNNNAGG	1 cut(s)	870
BstF5I	GGATG	2 cut(s)	452, 911
BstH2I	RGCGCY	2 cut(s)	279, 836
BstHHI	GCGC	2 cut(s)	278, 835
BstKTI	GATC	7 cut(s)	7, 18, 890, 921, 1483, 1618, 1754
BstMAI	GTCTC	3 cut(s)	467, 1621, 1786
BstMBI	GATC	7 cut(s)	4, 15, 887, 918, 1480, 1615, 1751
BstMWI	GCNNNNNNNGC	6 cut(s)	399, 438, 581, 713, 716, 1693
BstNI	CCWGG	1 cut(s)	873
BstNSI	RCATGY	2 cut(s)	436, 1735
BstSCI	CCNGG	3 cut(s)	286, 468, 871
BstSFI	CTRYAG	2 cut(s)	132, 363
BstSLI	GKGCMC	2 cut(s)	586, 665
BstV1I	GCAGC	8 cut(s)	525, 562, 719, 728, 802, 956, 1097, 1785
BstX2I	RGATCY	3 cut(s)	887, 1480, 1615
BstYI	RGATCY	3 cut(s)	887, 1480, 1615
BsuI	GTATCC	1 cut(s)	1595
BsuRI	GGCC	1 cut(s)	929
BtgI	CCRYGG	2 cut(s)	319, 1471
BtgZI	GCGATG	2 cut(s)	339, 822
BtsCI	GGATG	2 cut(s)	452, 911
BtsI	GCAGTG	2 cut(s)	665, 848
BtsIMutI	CAGTG	3 cut(s)	513, 665, 848
BveI	ACCTGC	1 cut(s)	580
Cac8I	GCNNGC	1 cut(s)	1698
CfoI	GCGC	2 cut(s)	278, 835
Cfr13I	GGNCC	1 cut(s)	569
Csp6I	GTAC	2 cut(s)	646, 1402
CviAII	CATG	9 cut(s)	44, 55, 433, 532, 1216, 1373, 1654, 1732, 1785
CviQI	GTAC	2 cut(s)	646, 1402
DinI	GGCGCC	1 cut(s)	277
DpnI	GATC	7 cut(s)	6, 17, 889, 920, 1482, 1617, 1753
DpnII	GATC	7 cut(s)	4, 15, 887, 918, 1480, 1615, 1751
EaeI	YGGCCR	1 cut(s)	927
Eam1104I	CTCTTC	3 cut(s)	77, 551, 1178
EarI	CTCTTC	3 cut(s)	77, 551, 1178
Eco130I	CCWWGG	2 cut(s)	682, 948
Eco31I	GGTCTC	1 cut(s)	1621
Eco47I	GGWCC	1 cut(s)	569
Eco57I	CTGAAG	6 cut(s)	129, 141, 573, 575, 1238, 1314
EcoNI	CCTNNNNNAGG	1 cut(s)	870
EcoO109I	RGGNCCY	1 cut(s)	569
EcoRII	CCWGG	1 cut(s)	871
EcoT14I	CCWWGG	2 cut(s)	682, 948
EcoT22I	ATGCAT	1 cut(s)	1374
EgeI	GGCGCC	1 cut(s)	277
EheI	GGCGCC	1 cut(s)	277
ErhI	CCWWGG	2 cut(s)	682, 948
FaeI	CATG	9 cut(s)	47, 58, 436, 535, 1219, 1376, 1657, 1735, 1788
FaqI	GGGAC	4 cut(s)	558, 582, 1032, 1531
FatI	CATG	9 cut(s)	43, 54, 432, 531, 1215, 1372, 1653, 1731, 1784
FauNDI	CATATG	1 cut(s)	1492
FbaI	TGATCA	1 cut(s)	918
Fnu4HI	GCNGC	9 cut(s)	536, 539, 576, 708, 717, 816, 970, 1086, 1774
FokI	GGATG	2 cut(s)	439, 898
Fsp4HI	GCNGC	9 cut(s)	536, 539, 576, 708, 717, 816, 970, 1086, 1774
FspBI	CTAG	4 cut(s)	683, 1194, 1452, 1770
GlaI	GCGC	2 cut(s)	277, 834
GluI	GCNGC	9 cut(s)	536, 539, 576, 708, 717, 816, 970, 1086, 1774
GsaI	CCCAGC	1 cut(s)	545
GsuI	CTGGAG	1 cut(s)	855
HaeII	RGCGCY	2 cut(s)	279, 836
HaeIII	GGCC	1 cut(s)	929
HapII	CCGG	2 cut(s)	288, 470
HhaI	GCGC	2 cut(s)	278, 835
Hin1I	GRCGYC	1 cut(s)	276
Hin1II	CATG	9 cut(s)	47, 58, 436, 535, 1219, 1376, 1657, 1735, 1788
Hin6I	GCGC	2 cut(s)	276, 833
HinP1I	GCGC	2 cut(s)	276, 833
HincII	GTYRAC	1 cut(s)	347
HindII	GTYRAC	1 cut(s)	347
HindIII	AAGCTT	1 cut(s)	1250
HinfI	GANTC	4 cut(s)	378, 1052, 1309, 1538
HpaII	CCGG	2 cut(s)	288, 470
HphI	GGTGA	2 cut(s)	220, 322
Hpy166II	GTNNAC	9 cut(s)	301, 347, 584, 622, 648, 663, 1144, 1402, 1598
Hpy188III	TCNNGA	4 cut(s)	1194, 1563, 1610, 1749
Hpy8I	GTNNAC	9 cut(s)	301, 347, 584, 622, 648, 663, 1144, 1402, 1598
HpyAV	CCTTC	7 cut(s)	368, 466, 502, 597, 1118, 1289, 1508
HpyF10VI	GCNNNNNNNGC	6 cut(s)	399, 438, 581, 713, 716, 1693
Hsp92I	GRCGYC	1 cut(s)	276
Hsp92II	CATG	9 cut(s)	47, 58, 436, 535, 1219, 1376, 1657, 1735, 1788
HspAI	GCGC	2 cut(s)	276, 833
KasI	GGCGCC	1 cut(s)	275
Ksp22I	TGATCA	1 cut(s)	918
Kzo9I	GATC	7 cut(s)	4, 15, 887, 918, 1480, 1615, 1751
LguI	GCTCTTC	2 cut(s)	77, 551
Lsp1109I	GCAGC	8 cut(s)	525, 562, 719, 728, 802, 956, 1097, 1785
LweI	GCATC	2 cut(s)	108, 997
MaeI	CTAG	4 cut(s)	683, 1194, 1452, 1770
MaeIII	GTNAC	5 cut(s)	328, 435, 880, 1432, 1664
MalI	GATC	7 cut(s)	6, 17, 889, 920, 1482, 1617, 1753
MboI	GATC	7 cut(s)	4, 15, 887, 918, 1480, 1615, 1751
MfeI	CAATTG	1 cut(s)	1077
MflI	RGATCY	3 cut(s)	887, 1480, 1615
MhlI	GDGCHC	2 cut(s)	586, 665
MlsI	TGGCCA	1 cut(s)	929
MluCI	AATT	9 cut(s)	385, 602, 1038, 1077, 1220, 1264, 1529, 1806, 1814
MluNI	TGGCCA	1 cut(s)	929
Mly113I	GGCGCC	1 cut(s)	276
MlyI	GAGTC	2 cut(s)	387, 1061
MmeI	TCCRAC	2 cut(s)	258, 1515
Mox20I	TGGCCA	1 cut(s)	929
Mph1103I	ATGCAT	1 cut(s)	1374
MroXI	GAANNNNTTC	2 cut(s)	602, 1308
MscI	TGGCCA	1 cut(s)	929
MseI	TTAA	5 cut(s)	1107, 1224, 1418, 1487, 1794
MslI	CAYNNNNRTG	1 cut(s)	653
Msp20I	TGGCCA	1 cut(s)	929
MspA1I	CMGCKG	1 cut(s)	538
MspI	CCGG	2 cut(s)	288, 470
MspR9I	CCNGG	3 cut(s)	288, 470, 873
MunI	CAATTG	1 cut(s)	1077
MvaI	CCWGG	1 cut(s)	873
MwoI	GCNNNNNNNGC	6 cut(s)	399, 438, 581, 713, 716, 1693
NarI	GGCGCC	1 cut(s)	276
NciI	CCSGG	2 cut(s)	288, 470
NdeI	CATATG	1 cut(s)	1492
NdeII	GATC	7 cut(s)	4, 15, 887, 918, 1480, 1615, 1751
NlaIII	CATG	9 cut(s)	47, 58, 436, 535, 1219, 1376, 1657, 1735, 1788
NlaIV	GGNNCC	3 cut(s)	277, 570, 1617
NmuCI	GTSAC	1 cut(s)	328
NsiI	ATGCAT	1 cut(s)	1374
NspI	RCATGY	2 cut(s)	436, 1735
OliI	CACNNNNGTG	1 cut(s)	653
PciSI	GCTCTTC	2 cut(s)	77, 551
PdmI	GAANNNNTTC	2 cut(s)	602, 1308
PfeI	GAWTC	2 cut(s)	1309, 1538
PkrI	GCNGC	9 cut(s)	537, 540, 577, 709, 718, 817, 971, 1087, 1775
PleI	GAGTC	2 cut(s)	386, 1060
PluTI	GGCGCC	1 cut(s)	279
PpsI	GAGTC	2 cut(s)	386, 1060
PpuMI	RGGWCCY	1 cut(s)	569
Psp5II	RGGWCCY	1 cut(s)	569
Psp6I	CCWGG	1 cut(s)	871
PspFI	CCCAGC	1 cut(s)	541
PspGI	CCWGG	1 cut(s)	871
PspN4I	GGNNCC	3 cut(s)	277, 570, 1617
PspPI	GGNCC	1 cut(s)	569
PspPPI	RGGWCCY	1 cut(s)	569
PsrI	GAACNNNNNNTAC	2 cut(s)	176, 208
PsuI	RGATCY	3 cut(s)	887, 1480, 1615
RsaI	GTAC	2 cut(s)	647, 1403
RsaNI	GTAC	2 cut(s)	646, 1402
RseI	CAYNNNNRTG	1 cut(s)	653
SapI	GCTCTTC	2 cut(s)	77, 551
SaqAI	TTAA	5 cut(s)	1107, 1224, 1418, 1487, 1794
SatI	GCNGC	9 cut(s)	536, 539, 576, 708, 717, 816, 970, 1086, 1774
Sau3AI	GATC	7 cut(s)	4, 15, 887, 918, 1480, 1615, 1751
Sau96I	GGNCC	1 cut(s)	569
SchI	GAGTC	2 cut(s)	387, 1061
ScrFI	CCNGG	3 cut(s)	288, 470, 873
SduI	GDGCHC	2 cut(s)	586, 665
SfaNI	GCATC	2 cut(s)	108, 997
SfcI	CTRYAG	2 cut(s)	132, 363
SfoI	GGCGCC	1 cut(s)	277
SinI	GGWCC	1 cut(s)	569
SmiMI	CAYNNNNRTG	1 cut(s)	653
SmlI	CTYRAG	3 cut(s)	397, 483, 891
SmoI	CTYRAG	3 cut(s)	397, 483, 891
SpeI	ACTAGT	1 cut(s)	1451
Sse9I	AATT	9 cut(s)	385, 602, 1038, 1077, 1220, 1264, 1529, 1806, 1814
SsiI	CCGC	2 cut(s)	526, 536
SspDI	GGCGCC	1 cut(s)	275
SspMI	CTAG	4 cut(s)	683, 1194, 1452, 1770
StyD4I	CCNGG	3 cut(s)	286, 468, 871
StyI	CCWWGG	2 cut(s)	682, 948
TaqI	TCGA	5 cut(s)	102, 677, 781, 1359, 1825
TasI	AATT	9 cut(s)	385, 602, 1038, 1077, 1220, 1264, 1529, 1806, 1814
TatI	WGTACW	2 cut(s)	645, 1401
TauI	GCSGC	1 cut(s)	538
TfiI	GAWTC	2 cut(s)	1309, 1538
Tru1I	TTAA	5 cut(s)	1107, 1224, 1418, 1487, 1794
Tru9I	TTAA	5 cut(s)	1107, 1224, 1418, 1487, 1794
TscAI	CASTG	3 cut(s)	520, 665, 855
TseFI	GTSAC	1 cut(s)	328
TseI	GCWGC	8 cut(s)	538, 575, 707, 716, 815, 969, 1085, 1773
Tsp45I	GTSAC	1 cut(s)	328
TspDTI	ATGAA	9 cut(s)	40, 64, 129, 297, 520, 801, 1050, 1335, 1584
TspRI	CASTG	3 cut(s)	520, 665, 855
VneI	GTGCAC	2 cut(s)	582, 661
VpaK11BI	GGWCC	1 cut(s)	569
XagI	CCTNNNNNAGG	1 cut(s)	870
XapI	RAATTY	3 cut(s)	602, 1220, 1264
XbaI	TCTAGA	1 cut(s)	1193
XceI	RCATGY	2 cut(s)	436, 1735
XmaJI	CCTAGG	1 cut(s)	682
XmnI	GAANNNNTTC	2 cut(s)	602, 1308
XspI	CTAG	4 cut(s)	683, 1194, 1452, 1770
Zsp2I	ATGCAT	1 cut(s)	1374

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.