Rorug04G0410700

Cysteine-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
Physical Location & Seq
Reverse (-)
57340682 .. 57341661
980 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0410700.1

Sequence Viewer

Length: 879 bp
ATGTTGGCTTCTAAAACCCAGCTGGTAAACCCTTGTCTAAACCTGATCTCATTCCCTCCTTCCCCAAAACCCTGCAACCTCCCCAACACCCTCACCTTCTTCCGCCCCAAATATCCACCGCACTCGCACTCGCACTCACTCTCAATCAAAGCCCAACACCCGGCTCATACCACTCCAGGTCAGCTCCGGGTCGACATTCTCTCCGAATCCCTACCCTTCATCCAGAAATTCCGAGGCAAAACCATCGTCATCAAGTACGGCGGCGCCACCATGAAAGACGAGACCCTCCAAGCCCCCGTCATCAGAGACCTCGTCCTCCTCGCTTGCGTCGGCCTCTGCCCCATTCTGGTCCACGGCGGCGGCCCCGAGATCAACCTCTGGCTCAAGCGCCTCAACATCGAGGTCAACTTCCACGATGGCCTTCGTGTCACCGACGCGCCCACCATGGAGATCGTCTCCATGGTCTTGGCCGACAAAGTCAACAAGCATTTGGTCTCCTTGATCAACCGGGAAGGAGTCAAGGCCATCGGCCTCTGCGGCTCCGACGGCGAGCTCATCACCTCCCGCCCCGCCCCCAACGCCGCCAAGTTAGGAAAATGGAATGAGGAGCATAGGGAGAAGGGAGAAGATGCTTATGATGATAACATTTTTGAAGATTTGGTAAGGAGATTTGAGACACCAGATAGAAGAAATCGGTGGGATTCCCCTTTGTTTGAGTTATGGCCACATAGAGAAGGTGTAGGATCTTCTGCTGCCATTCTAGATTCGATTTCGTATCTGACAAAGAAGGTGAACTTCGGAGAGGCTACGGCGGCTCTCGGCGACCTGGCTTGGAGGAATGGCAGCTACGGGTTGTCTAGGCTTCTAGGCAGTAGGTGA

Protein Analysis

292

Amino Acids

32.35

Weight (kDa)

8.76

Isoelectric Point (pI)

46.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AA_kinase PF00696 80 - 190 1.5e-15 Amino acid kinase family
KTI12 PF08433 194 - 242 2e-11 Chromatin associated protein KTI12
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000283)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G45860 AT4G05200 AT4G05200 AT4G11521 AT4G11530 AT4G23130 AT4G23130 AT4G23130 AT4G23140 AT4G23140 AT4G23150 AT4G23160 AT4G23170 AT4G23180 AT4G23180 AT4G23180 AT4G23230 AT4G23270 AT4G23270 AT4G23270 AT4G23280 AT4G23280 AT4G23280 AT4G23310 AT4G23310
fragaria_vesca FvH4_3g02772 FvH4_3g02772 FvH4_3g02773 FvH4_3g02773 FvH4_3g02774 FvH4_3g02800 FvH4_3g02820 FvH4_3g02820 FvH4_3g02830
malus_domestica MD00G1101900.v1.1 MD00G1102100.v1.1 MD00G1102200.v1.1 MD01G1098200.v1.1 MD05G1340000.v1.1 MD05G1340300.v1.1 MD07G1014100.v1.1 MD07G1014300.v1.1 MD07G1014400.v1.1 MD07G1014700.v1.1 MD10G1312900.v1.1 MD11G1022600.v1.1 MD11G1291500.v1.1 MD14G1207100.v1.1 MD16G1096600.v1.1
prunus_persica Prupe.4G027300_v2.0.a1 Prupe.4G027400_v2.0.a1 Prupe.4G027700_v2.0.a1 Prupe.4G027800_v2.0.a1
pyrus_communis pycom05g30960 pycom10g00940 pycom10g00950 pycom10g26430 pycom10g26450 pycom10g26460 pycom10g26470 pycom10g26480 pycom10g26490 pycom10g26500 pycom10g26510 pycom10g26570 pycom11g01820 pycom11g04000 pycom14g17130 pycom14g17140 pycom15g28820
rosa_chinensis RchiOBHm_Chr4g0408141 RchiOBHm_Chr5g0004211 RchiOBHm_Chr5g0004231 RchiOBHm_Chr5g0004241 RchiOBHm_Chr5g0004261
rosa_laevigata RLG00000008668 RLG00000008672 RLG00000031212 RLG00000031217
rosa_multiflora Rmu_co8162658.1_g000001 Rmu_co8336297.1_g000001 Rmu_sc0002073.1_g000001 Rmu_sc0004964.1_g000002 Rmu_sc0004964.1_g000003 Rmu_sc0004964.1_g000007 Rmu_sc0006006.1_g000007 Rmu_sc0007868.1_g000015 Rmu_sc0007868.1_g000016 Rmu_sc0007868.1_g000017 Rmu_sc0007868.1_g000021 Rmu_sc0007868.1_g000023 Rmu_sc0019654.1_g000002 Rmu_sc0038540.1_g000001
rosa_roxburghii Rroxscaffold_1G00071450 Rroxscaffold_1G00071460 Rroxscaffold_1G00071470 Rroxscaffold_1G00071560 Rroxscaffold_1G00071720 Rroxscaffold_1G00071770 Rroxscaffold_5G00352640
rosa_rugosa Rorug04G0083700 Rorug04G0410700 Rorug04G0410800 Rorug04G0410900
rosa_samantha Rh4BG145400 Rh4CG154900 Rh4DG141900 Rh5BG037500 Rh5BG037600 Rh5BG037700 Rh5CG041000 Rh5CG041100 Rh5CG041200 Rh5CG041300 Rh5CG041400 Rh5DG037100
rosa_wichuraiana Rw4G012130 Rw5G003450 Rw5G003460 Rw5G003470 Rw5G003480 Rw5G003640 Rw5G003660 Rw5G003670 Rw5G003680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 263
AccI GTMKAC 1 cut(s) 192
AccII CGCG 1 cut(s) 437
AclWI GGATC 1 cut(s) 751
AcoI YGGCCR 2 cut(s) 468, 722
AcsI RAATTY 1 cut(s) 227
AcyI GRCGYC 1 cut(s) 264
AfaI GTAC 1 cut(s) 257
AfiI CCNNNNNNNGG 2 cut(s) 160, 346
AgsI TTSAA 1 cut(s) 653
AjnI CCWGG 2 cut(s) 175, 825
AluBI AGCT 4 cut(s) 22, 184, 553, 846
AluI AGCT 4 cut(s) 22, 184, 553, 846
Alw21I GWGCWC 1 cut(s) 555
Alw26I GTCTC 5 cut(s) 275, 300, 460, 499, 668
AlwI GGATC 1 cut(s) 751
Ama87I CYCGRG 1 cut(s) 365
AoxI GGCC 7 cut(s) 331, 361, 418, 468, 522, 529, 722
ApeKI GCWGC 2 cut(s) 752, 843
ApoI RAATTY 1 cut(s) 227
ArsI GACNNNNNNTTYG 2 cut(s) 231, 263
AspLEI GCGC 3 cut(s) 266, 390, 439
AspS9I GGNCC 2 cut(s) 349, 362
AsuC2I CCSGG 3 cut(s) 161, 188, 509
AsuHPI GGTGA 4 cut(s) 85, 421, 550, 802
AvaI CYCGRG 1 cut(s) 365
AvaII GGWCC 1 cut(s) 349
BalI TGGCCA 1 cut(s) 724
BanI GGYRCC 1 cut(s) 263
BanII GRGCYC 1 cut(s) 555
Bbv12I GWGCWC 1 cut(s) 555
BbvI GCAGC 2 cut(s) 739, 855
BccI CCATC 3 cut(s) 251, 410, 533
BceAI ACGGC 4 cut(s) 274, 370, 562, 825
BcgI CGANNNNNNTGC 2 cut(s) 226, 260
BciT130I CCWGG 2 cut(s) 177, 827
BclI TGATCA 1 cut(s) 501
BcnI CCSGG 3 cut(s) 161, 188, 509
BcoDI GTCTC 5 cut(s) 275, 300, 460, 499, 668
BfaI CTAG 3 cut(s) 761, 858, 866
BfoI RGCGCY 2 cut(s) 267, 391
BglI GCCNNNNNGGC 1 cut(s) 537
BisI GCNGC 8 cut(s) 262, 358, 361, 538, 582, 753, 813, 844
BlsI GCNGC 8 cut(s) 263, 359, 362, 539, 583, 754, 814, 845
Bme1390I CCNGG 5 cut(s) 161, 177, 188, 509, 827
Bme18I GGWCC 1 cut(s) 349
BmeT110I CYCGRG 1 cut(s) 365
BmgT120I GGNCC 2 cut(s) 349, 362
BmiI GGNNCC 3 cut(s) 265, 364, 541
BmrFI CCNGG 5 cut(s) 161, 177, 188, 509, 827
BmsI GCATC 1 cut(s) 619
BplI GAGNNNNNCTC 2 cut(s) 440, 472
BpmI CTGGAG 1 cut(s) 159
BpuEI CTTGAG 1 cut(s) 368
BpuMI CCSGG 3 cut(s) 161, 188, 509
BsaHI GRCGYC 1 cut(s) 264
BsaI GGTCTC 3 cut(s) 275, 300, 499
BsaJI CCNNGG 4 cut(s) 232, 352, 444, 459
BsaXI ACNNNNNCTCC 2 cut(s) 185, 215
Bsc4I CCNNNNNNNGG 2 cut(s) 160, 346
BseBI CCWGG 2 cut(s) 177, 827
BseDI CCNNGG 4 cut(s) 232, 352, 444, 459
BseGI GGATG 1 cut(s) 219
BseLI CCNNNNNNNGG 2 cut(s) 160, 346
BseRI GAGGAG 2 cut(s) 308, 620
BseXI GCAGC 2 cut(s) 739, 855
BseYI CCCAGC 1 cut(s) 18
Bsh1236I CGCG 1 cut(s) 437
BshFI GGCC 7 cut(s) 333, 363, 420, 470, 524, 531, 724
BshNI GGYRCC 1 cut(s) 263
BsiHKAI GWGCWC 1 cut(s) 555
BsiHKCI CYCGRG 1 cut(s) 365
BsiSI CCGG 3 cut(s) 161, 187, 508
BslI CCNNNNNNNGG 2 cut(s) 160, 346
BsmAI GTCTC 5 cut(s) 275, 300, 460, 499, 668
BsmBI CGTCTC 1 cut(s) 460
BsnI GGCC 7 cut(s) 333, 363, 420, 470, 524, 531, 724
Bso31I GGTCTC 3 cut(s) 275, 300, 499
BsoBI CYCGRG 1 cut(s) 365
Bsp1286I GDGCHC 1 cut(s) 555
Bsp143I GATC 5 cut(s) 45, 369, 450, 501, 743
Bsp19I CCATGG 2 cut(s) 444, 459
BspANI GGCC 7 cut(s) 333, 363, 420, 470, 524, 531, 724
BspFNI CGCG 1 cut(s) 437
BspLI GGNNCC 3 cut(s) 265, 364, 541
BspPI GGATC 1 cut(s) 751
BspT107I GGYRCC 1 cut(s) 263
BspTNI GGTCTC 3 cut(s) 275, 300, 499
BssECI CCNNGG 4 cut(s) 232, 352, 444, 459
BssMI GATC 5 cut(s) 45, 369, 450, 501, 743
BssNI GRCGYC 1 cut(s) 264
BssT1I CCWWGG 2 cut(s) 444, 459
Bst2UI CCWGG 2 cut(s) 177, 827
BstACI GRCGYC 1 cut(s) 264
BstC8I GCNNGC 2 cut(s) 325, 551
BstDSI CCRYGG 3 cut(s) 352, 444, 459
BstF5I GGATG 1 cut(s) 219
BstFNI CGCG 1 cut(s) 437
BstH2I RGCGCY 2 cut(s) 267, 391
BstHHI GCGC 3 cut(s) 266, 390, 439
BstKTI GATC 5 cut(s) 48, 372, 453, 504, 746
BstMAI GTCTC 5 cut(s) 275, 300, 460, 499, 668
BstMBI GATC 5 cut(s) 45, 369, 450, 501, 743
BstMWI GCNNNNNNNGC 4 cut(s) 537, 546, 578, 812
BstNI CCWGG 2 cut(s) 177, 827
BstSCI CCNGG 5 cut(s) 159, 175, 186, 507, 825
BstUI CGCG 1 cut(s) 437
BstV1I GCAGC 2 cut(s) 739, 855
BstX2I RGATCY 1 cut(s) 743
BstXI CCANNNNNNTGG 1 cut(s) 466
BstYI RGATCY 1 cut(s) 743
BsuRI GGCC 7 cut(s) 333, 363, 420, 470, 524, 531, 724
BtgI CCRYGG 3 cut(s) 352, 444, 459
BtsCI GGATG 1 cut(s) 219
Cac8I GCNNGC 2 cut(s) 325, 551
CfoI GCGC 3 cut(s) 266, 390, 439
Cfr13I GGNCC 2 cut(s) 349, 362
CseI GACGC 2 cut(s) 316, 443
Csp6I GTAC 1 cut(s) 256
CviAII CATG 3 cut(s) 271, 445, 460
CviQI GTAC 1 cut(s) 256
DinI GGCGCC 1 cut(s) 265
DpnI GATC 5 cut(s) 47, 371, 452, 503, 745
DpnII GATC 5 cut(s) 45, 369, 450, 501, 743
EaeI YGGCCR 2 cut(s) 468, 722
EciI GGCGGA 1 cut(s) 92
Ecl136II GAGCTC 1 cut(s) 553
Eco130I CCWWGG 2 cut(s) 444, 459
Eco24I GRGCYC 1 cut(s) 555
Eco31I GGTCTC 3 cut(s) 275, 300, 499
Eco47I GGWCC 1 cut(s) 349
Eco53kI GAGCTC 1 cut(s) 553
Eco88I CYCGRG 1 cut(s) 365
EcoICRI GAGCTC 1 cut(s) 553
EcoRII CCWGG 2 cut(s) 175, 825
EcoT14I CCWWGG 2 cut(s) 444, 459
EcoT38I GRGCYC 1 cut(s) 555
EgeI GGCGCC 1 cut(s) 265
EheI GGCGCC 1 cut(s) 265
ErhI CCWWGG 2 cut(s) 444, 459
Esp3I CGTCTC 1 cut(s) 460
FaeI CATG 3 cut(s) 274, 448, 463
FaiI YATR 8 cut(s) 168, 272, 446, 461, 612, 636, 721, 729
FalI AAGNNNNNCTT 2 cut(s) 779, 811
FatI CATG 3 cut(s) 270, 444, 459
FauI CCCGC 2 cut(s) 572, 577
FbaI TGATCA 1 cut(s) 501
FblI GTMKAC 1 cut(s) 192
Fnu4HI GCNGC 8 cut(s) 262, 358, 361, 538, 582, 753, 813, 844
FokI GGATG 1 cut(s) 206
FriOI GRGCYC 1 cut(s) 555
Fsp4HI GCNGC 8 cut(s) 262, 358, 361, 538, 582, 753, 813, 844
FspBI CTAG 3 cut(s) 761, 858, 866
GlaI GCGC 3 cut(s) 265, 389, 438
GluI GCNGC 8 cut(s) 262, 358, 361, 538, 582, 753, 813, 844
GsaI CCCAGC 1 cut(s) 22
GsuI CTGGAG 1 cut(s) 159
HaeII RGCGCY 2 cut(s) 267, 391
HaeIII GGCC 7 cut(s) 333, 363, 420, 470, 524, 531, 724
HapII CCGG 3 cut(s) 161, 187, 508
HgaI GACGC 2 cut(s) 316, 443
HhaI GCGC 3 cut(s) 266, 390, 439
Hin1I GRCGYC 1 cut(s) 264
Hin1II CATG 3 cut(s) 274, 448, 463
Hin6I GCGC 3 cut(s) 264, 388, 437
HinP1I GCGC 3 cut(s) 264, 388, 437
HincII GTYRAC 3 cut(s) 193, 406, 481
HindII GTYRAC 3 cut(s) 193, 406, 481
HinfI GANTC 4 cut(s) 206, 516, 701, 764
HpaII CCGG 3 cut(s) 161, 187, 508
HphI GGTGA 4 cut(s) 85, 421, 550, 802
Hpy166II GTNNAC 6 cut(s) 28, 193, 352, 406, 481, 793
Hpy188I TCNGA 6 cut(s) 205, 233, 305, 544, 780, 800
Hpy188III TCNNGA 2 cut(s) 223, 761
Hpy8I GTNNAC 6 cut(s) 28, 193, 352, 406, 481, 793
Hpy99I CGWCG 3 cut(s) 332, 437, 548
HpyAV CCTTC 8 cut(s) 69, 106, 226, 431, 506, 613, 728, 781
HpyCH4V TGCA 1 cut(s) 75
HpyF10VI GCNNNNNNNGC 4 cut(s) 537, 546, 578, 812
Hsp92I GRCGYC 1 cut(s) 264
Hsp92II CATG 3 cut(s) 274, 448, 463
HspAI GCGC 3 cut(s) 264, 388, 437
KasI GGCGCC 1 cut(s) 263
Ksp22I TGATCA 1 cut(s) 501
Kzo9I GATC 5 cut(s) 45, 369, 450, 501, 743
LmnI GCTCC 3 cut(s) 189, 545, 607
Lsp1109I GCAGC 2 cut(s) 739, 855
LweI GCATC 1 cut(s) 619
MaeI CTAG 3 cut(s) 761, 858, 866
MaeIII GTNAC 1 cut(s) 427
MalI GATC 5 cut(s) 47, 371, 452, 503, 745
MboI GATC 5 cut(s) 45, 369, 450, 501, 743
MboII GAAGA 5 cut(s) 91, 638, 665, 699, 738
MflI RGATCY 1 cut(s) 743
MhlI GDGCHC 1 cut(s) 555
MlsI TGGCCA 1 cut(s) 724
MluCI AATT 1 cut(s) 227
MluNI TGGCCA 1 cut(s) 724
Mly113I GGCGCC 1 cut(s) 264
MlyI GAGTC 1 cut(s) 525
MmeI TCCRAC 1 cut(s) 567
Mox20I TGGCCA 1 cut(s) 724
MscI TGGCCA 1 cut(s) 724
Msp20I TGGCCA 1 cut(s) 724
MspA1I CMGCKG 1 cut(s) 22
MspI CCGG 3 cut(s) 161, 187, 508
MspR9I CCNGG 5 cut(s) 161, 177, 188, 509, 827
MvaI CCWGG 2 cut(s) 177, 827
MvnI CGCG 1 cut(s) 437
MwoI GCNNNNNNNGC 4 cut(s) 537, 546, 578, 812
NarI GGCGCC 1 cut(s) 264
NciI CCSGG 3 cut(s) 161, 188, 509
NcoI CCATGG 2 cut(s) 444, 459
NdeII GATC 5 cut(s) 45, 369, 450, 501, 743
NlaIII CATG 3 cut(s) 274, 448, 463
NlaIV GGNNCC 3 cut(s) 265, 364, 541
NmeAIII GCCGAG 1 cut(s) 798
NmuCI GTSAC 1 cut(s) 427
PfeI GAWTC 3 cut(s) 206, 701, 764
PflFI GACNNNGTC 2 cut(s) 311, 476
PkrI GCNGC 8 cut(s) 263, 359, 362, 539, 583, 754, 814, 845
PleI GAGTC 1 cut(s) 524
PluTI GGCGCC 1 cut(s) 267
PpsI GAGTC 1 cut(s) 524
Psp124BI GAGCTC 1 cut(s) 555
Psp6I CCWGG 2 cut(s) 175, 825
PspFI CCCAGC 1 cut(s) 18
PspGI CCWGG 2 cut(s) 175, 825
PspN4I GGNNCC 3 cut(s) 265, 364, 541
PspPI GGNCC 2 cut(s) 349, 362
PsuI RGATCY 1 cut(s) 743
PsyI GACNNNGTC 2 cut(s) 311, 476
PvuII CAGCTG 1 cut(s) 22
RsaI GTAC 1 cut(s) 257
RsaNI GTAC 1 cut(s) 256
SacI GAGCTC 1 cut(s) 555
SalI GTCGAC 1 cut(s) 191
SatI GCNGC 8 cut(s) 262, 358, 361, 538, 582, 753, 813, 844
Sau3AI GATC 5 cut(s) 45, 369, 450, 501, 743
Sau96I GGNCC 2 cut(s) 349, 362
SchI GAGTC 1 cut(s) 525
ScrFI CCNGG 5 cut(s) 161, 177, 188, 509, 827
SduI GDGCHC 1 cut(s) 555
SfaNI GCATC 1 cut(s) 619
SfoI GGCGCC 1 cut(s) 265
SinI GGWCC 1 cut(s) 349
SmlI CTYRAG 1 cut(s) 383
SmoI CTYRAG 1 cut(s) 383
Sse9I AATT 1 cut(s) 227
SspDI GGCGCC 1 cut(s) 263
SspMI CTAG 3 cut(s) 761, 858, 866
SstI GAGCTC 1 cut(s) 555
StyD4I CCNGG 5 cut(s) 159, 175, 186, 507, 825
StyI CCWWGG 2 cut(s) 444, 459
TaqI TCGA 3 cut(s) 192, 399, 767
TasI AATT 1 cut(s) 227
TauI GCSGC 6 cut(s) 264, 360, 363, 540, 584, 815
TfiI GAWTC 3 cut(s) 206, 701, 764
TseFI GTSAC 1 cut(s) 427
TseI GCWGC 2 cut(s) 752, 843
Tsp45I GTSAC 1 cut(s) 427
TspDTI ATGAA 2 cut(s) 208, 287
Tth111I GACNNNGTC 2 cut(s) 311, 476
VpaK11BI GGWCC 1 cut(s) 349
XapI RAATTY 1 cut(s) 227
XbaI TCTAGA 1 cut(s) 760
XmiI GTMKAC 1 cut(s) 192
XspI CTAG 3 cut(s) 761, 858, 866
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.