Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr14

Orthogroup ID

OG0000283

Physical Location & Seq

Genomic Coordinates Reverse (-)

19204433 .. 19207075

Gene Structure 2643 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom14g17130.7

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1968 bp

ATGAAAAACATTACTACCCTTCTTTTGATTATTTCCATTTTTCCTCTGCTCAGCTTTCCGACCAGTACGGAAGCTGATTACCTGGCTAACCTCTGCCCAAACACCACCACCTTCACCCCAAACTCCACCTTCCAGTCCAATCTCAACCGCCTCCTCTCCGCCCTCTCCTCCAACGCTAACCGCTCCACCGGTTTCTACAACGCCACAGTCCAAACCACAAACAACGCCGTCTACGGCCTTTTCCTCTGCCGCGGCGACGTCGTGGGCACCGACGCTTGCGAAACCTGTGTCCCCACCGCAATCGCCAAGGCCTCACAACTCTGCTCCTTTAAAAAACAGGTGGTGATCTGGTACGACGACTGCATGCTACGCTATTCCAACGAGTCATTCTTCTCCACCGCCCCCCAGTTGAACCCCCTGTACATGTGGGACATGGATAACACCACCGACCAGACTCGGTTCAACCAGGTGGTGGCGGCGAGTATGAACGAGGTGGCTACCGAGGCTGCCAAAGACGCCGACAAGTTCGCTACAAAAAAAGAGAACGTCATCGATCTGATTCCCCTGTACATCCTTGGACAGTGCACACAGGACCTGTCCGCGACTGCTTGCGAACAGTGCTTTAGGGTTGCCATAGCGGAATGGCGGAATTGTTGTAGCGGAAAGCAAGCGGTACGCCTTCTGCATCCGAGTTGTAACGTTAGGTATGCAACCTACCCCTTCTACGCCCAGAACGCCACAGCCTCTGAGCCTGCACCAGGGGCTCCTCCTCCTCCGCCTAAAGGAAAAAGCAAAATCCCAACTGTTACAGTTGTTGCCATTGTTGTACCAATATCTGTATCTGTGCTACTCATTGTTGTTGGGTACTGCTGCATAACTAGGAGAGCAAGAAAGAAGTACAATCAAGCAGCAGCAGACGAACCAAGCGGTGACAATGACATTACTACTGTCGGGTCTTTGCAATTTGATTTTGCTGCCATCCAAGCAGCCACGAGCAATTTCTCCGATGATCACAAGTTAGGCGAAGGTGGTTTCGGTAAAGTTTACAAGGGTATACTTTCAAACGGTCAAGAAGTAGCTGTGAAGAGGCTATCAAGGAACTCTGACCAAGGCACGGAAGAGTTTAAGAATGAGATGGTATTGGTAGCCAAGCTTCAACACCGAAATCTGGTTAGGCTATCGGGATTCTGCTTGGAAGGCCAAGAAAAGATTCTTATTTATGAATTTGTGCCCAACAAAAGCCTAGACTACCCTGAGAGACAAAGGCAATTGGATTGGTCAAGACGTTACAAGATTATTTCAGGAATTGCAAAAGGAATCATGTACCTACATGAAGATTCCCGACTTAGAATTATACATCGTGATCTCAAAGCTAGTAATATATTGTTAGATGGGGAGATGCATCCAAAAATATCTGATTTTGGCATGGCTAGGATATTTGGGGTCGATCAATCTCAAGCAAACACAAATAGAATTGTTGGAACATTTGGTTATATGTCTCCCGAGTATGTAAGACACGGACATTTTTCTGTCAAGTCCGATCTATATAGTTTCGGTGTTTTAGTGCTAGAAATCATCAGTGGCAAGAAGAACAGTGAATTCTTTCAGACTGATGCAACTGAGGACCTCATGAGCCATGCTTGGAAGTTATGGAGAGATGGGGCACCTTTGGAATTGTTGGATCCGTGTCTAAGAGACTTTTATTCGAGGACTGAAGTAATCAGATGCATCCACATCGGCTTACTTTGTGTTCAGGACGATCCAGCTGATAGGCCGACAATGCAATCAGTAGTTCTCATGCTCAGTAGCTACTCTCTTACTCTGCCATCACCTCAACAACCGGCATTTTTCCTCCAAAGCAGAGCAATGGGAAACATGTCGGAGGCAACACTGGACTCCACTCAATCTATCAGTAAGTCATCTCCATCCGTTTATGAAGGATCTATCACTGAAGTATACCCAAGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009617 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0042742 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050896 GO:0051704 GO:0051707 GO:0071704 GO:0071944 GO:0098542 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr Stress-antifung

Protein Analysis

656

Amino Acids

72.8

Weight (kDa)

6.57

Isoelectric Point (pI)

46.62

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000283)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G45860 AT4G05200 AT4G05200 AT4G11521 AT4G11530 AT4G23130 AT4G23130 AT4G23130 AT4G23140 AT4G23140 AT4G23150 AT4G23160 AT4G23170 AT4G23180 AT4G23180 AT4G23180 AT4G23230 AT4G23270 AT4G23270 AT4G23270 AT4G23280 AT4G23280 AT4G23280 AT4G23310 AT4G23310
fragaria_vesca	FvH4_3g02772 FvH4_3g02772 FvH4_3g02773 FvH4_3g02773 FvH4_3g02774 FvH4_3g02800 FvH4_3g02820 FvH4_3g02820 FvH4_3g02830
malus_domestica	MD00G1101900.v1.1 MD00G1102100.v1.1 MD00G1102200.v1.1 MD01G1098200.v1.1 MD05G1340000.v1.1 MD05G1340300.v1.1 MD07G1014100.v1.1 MD07G1014300.v1.1 MD07G1014400.v1.1 MD07G1014700.v1.1 MD10G1312900.v1.1 MD11G1022600.v1.1 MD11G1291500.v1.1 MD14G1207100.v1.1 MD16G1096600.v1.1
prunus_persica	Prupe.4G027300_v2.0.a1 Prupe.4G027400_v2.0.a1 Prupe.4G027700_v2.0.a1 Prupe.4G027800_v2.0.a1
pyrus_communis	pycom05g30960 pycom10g00940 pycom10g00950 pycom10g26430 pycom10g26450 pycom10g26460 pycom10g26470 pycom10g26480 pycom10g26490 pycom10g26500 pycom10g26510 pycom10g26570 pycom11g01820 pycom11g04000 pycom14g17130 pycom14g17140 pycom15g28820
rosa_chinensis	RchiOBHm_Chr4g0408141 RchiOBHm_Chr5g0004211 RchiOBHm_Chr5g0004231 RchiOBHm_Chr5g0004241 RchiOBHm_Chr5g0004261
rosa_laevigata	RLG00000008668 RLG00000008672 RLG00000031212 RLG00000031217
rosa_multiflora	Rmu_co8162658.1_g000001 Rmu_co8336297.1_g000001 Rmu_sc0002073.1_g000001 Rmu_sc0004964.1_g000002 Rmu_sc0004964.1_g000003 Rmu_sc0004964.1_g000007 Rmu_sc0006006.1_g000007 Rmu_sc0007868.1_g000015 Rmu_sc0007868.1_g000016 Rmu_sc0007868.1_g000017 Rmu_sc0007868.1_g000021 Rmu_sc0007868.1_g000023 Rmu_sc0019654.1_g000002 Rmu_sc0038540.1_g000001
rosa_roxburghii	Rroxscaffold_1G00071450 Rroxscaffold_1G00071460 Rroxscaffold_1G00071470 Rroxscaffold_1G00071560 Rroxscaffold_1G00071720 Rroxscaffold_1G00071770 Rroxscaffold_5G00352640
rosa_rugosa	Rorug04G0083700 Rorug04G0410700 Rorug04G0410800 Rorug04G0410900
rosa_samantha	Rh4BG145400 Rh4CG154900 Rh4DG141900 Rh5BG037500 Rh5BG037600 Rh5BG037700 Rh5CG041000 Rh5CG041100 Rh5CG041200 Rh5CG041300 Rh5CG041400 Rh5DG037100
rosa_wichuraiana	Rw4G012130 Rw5G003450 Rw5G003460 Rw5G003470 Rw5G003480 Rw5G003640 Rw5G003660 Rw5G003670 Rw5G003680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	261
AccB1I	GGYRCC	2 cut(s)	266, 1663
AccB7I	CCANNNNNTGG	1 cut(s)	472
AccBSI	CCGCTC	1 cut(s)	183
AccI	GTMKAC	3 cut(s)	231, 1054, 1956
AccII	CGCG	2 cut(s)	252, 602
AclI	AACGTT	1 cut(s)	699
AclWI	GGATC	4 cut(s)	1676, 1689, 1754, 1948
AcsI	RAATTY	2 cut(s)	1223, 1598
AcuI	CTGAAG	1 cut(s)	1734
AcyI	GRCGYC	2 cut(s)	258, 516
AfaI	GTAC	9 cut(s)	67, 353, 422, 569, 675, 828, 866, 899, 1325
AfiI	CCNNNNNNNGG	5 cut(s)	472, 758, 782, 1114, 1168
AflIII	ACRYGT	2 cut(s)	423, 1875
AgeI	ACCGGT	1 cut(s)	188
AgsI	TTSAA	4 cut(s)	412, 463, 1062, 1157
AjnI	CCWGG	3 cut(s)	81, 465, 757
AjuI	GAANNNNNNNTTGG	4 cut(s)	371, 403, 1194, 1226
AluBI	AGCT	7 cut(s)	54, 74, 1079, 1153, 1373, 1766, 1809
AluI	AGCT	7 cut(s)	54, 74, 1079, 1153, 1373, 1766, 1809
Alw21I	GWGCWC	1 cut(s)	587
Alw26I	GTCTC	3 cut(s)	1252, 1503, 1689
Alw44I	GTGCAC	1 cut(s)	583
AlwI	GGATC	4 cut(s)	1676, 1689, 1754, 1948
AlwNI	CAGNNNCTG	2 cut(s)	595, 746
Ama87I	CYCGRG	1 cut(s)	1502
AoxI	GGCC	4 cut(s)	235, 309, 1198, 1772
ApaLI	GTGCAC	1 cut(s)	583
ApeKI	GCWGC	6 cut(s)	506, 870, 908, 911, 974, 986
ApoI	RAATTY	2 cut(s)	1223, 1598
ArsI	GACNNNNNNTTYG	2 cut(s)	273, 305
AsiGI	ACCGGT	1 cut(s)	188
Asp700I	GAANNNNTTC	2 cut(s)	1209, 1602
AspS9I	GGNCC	2 cut(s)	592, 1624
AsuHPI	GGTGA	4 cut(s)	106, 355, 941, 1821
AvaI	CYCGRG	1 cut(s)	1502
AvaII	GGWCC	2 cut(s)	592, 1624
BaeGI	GKGCMC	4 cut(s)	269, 587, 1233, 1666
BamHI	GGATCC	1 cut(s)	1681
BanI	GGYRCC	2 cut(s)	266, 1663
BanII	GRGCYC	1 cut(s)	766
BarI	GAAGNNNNNNTAC	2 cut(s)	1137, 1169
BauI	CACGAG	1 cut(s)	991
Bbv12I	GWGCWC	1 cut(s)	587
BbvI	GCAGC	6 cut(s)	493, 857, 920, 923, 961, 998
BccI	CCATC	6 cut(s)	986, 1129, 1385, 1652, 1834, 1933
BceAI	ACGGC	2 cut(s)	212, 250
BcgI	CGANNNNNNTGC	2 cut(s)	1717, 1751
BciT130I	CCWGG	3 cut(s)	83, 467, 759
BclI	TGATCA	1 cut(s)	1009
BcoDI	GTCTC	3 cut(s)	1252, 1503, 1689
BfaI	CTAG	5 cut(s)	879, 1244, 1374, 1431, 1568
BisI	GCNGC	9 cut(s)	250, 253, 477, 507, 871, 909, 912, 975, 987
BlpI	GCTNAGC	1 cut(s)	50
BlsI	GCNGC	9 cut(s)	251, 254, 478, 508, 872, 910, 913, 976, 988
Bme1390I	CCNGG	3 cut(s)	83, 467, 759
Bme18I	GGWCC	2 cut(s)	592, 1624
BmeT110I	CYCGRG	1 cut(s)	1502
BmgT120I	GGNCC	2 cut(s)	592, 1624
BmiI	GGNNCC	4 cut(s)	268, 765, 1665, 1683
BmrFI	CCNGG	3 cut(s)	83, 467, 759
BmrI	ACTGGG	1 cut(s)	400
BmsI	GCATC	6 cut(s)	694, 1389, 1411, 1603, 1715, 1737
BmuI	ACTGGG	1 cut(s)	400
Bpu1102I	GCTNAGC	1 cut(s)	50
BpuEI	CTTGAG	1 cut(s)	1440
Bsa29I	ATCGAT	1 cut(s)	552
BsaHI	GRCGYC	2 cut(s)	258, 516
BsaJI	CCNNGG	6 cut(s)	250, 306, 501, 574, 758, 1108
BsaWI	WCCGGW	1 cut(s)	188
Bsc4I	CCNNNNNNNGG	5 cut(s)	472, 758, 782, 1114, 1168
Bse118I	RCCGGY	2 cut(s)	188, 1840
Bse1I	ACTGG	4 cut(s)	63, 133, 406, 1896
Bse3DI	GCAATG	1 cut(s)	1872
BseBI	CCWGG	3 cut(s)	83, 467, 759
BseCI	ATCGAT	1 cut(s)	552
BseDI	CCNNGG	6 cut(s)	250, 306, 501, 574, 758, 1108
BseGI	GGATG	6 cut(s)	570, 685, 978, 1402, 1728, 1925
BseLI	CCNNNNNNNGG	5 cut(s)	472, 758, 782, 1114, 1168
BseMI	GCAATG	1 cut(s)	1872
BseMII	CTCAG	5 cut(s)	64, 738, 1245, 1611, 1816
BseNI	ACTGG	4 cut(s)	63, 133, 406, 1896
BseRI	GAGGAG	5 cut(s)	143, 157, 756, 759, 762
BseSI	GKGCMC	4 cut(s)	269, 587, 1233, 1666
BseXI	GCAGC	6 cut(s)	493, 857, 920, 923, 961, 998
BsgI	GTGCAG	1 cut(s)	738
Bsh1236I	CGCG	2 cut(s)	252, 602
BshFI	GGCC	4 cut(s)	237, 311, 1200, 1774
BshNI	GGYRCC	2 cut(s)	266, 1663
BshTI	ACCGGT	1 cut(s)	188
BshVI	ATCGAT	1 cut(s)	552
BsiHKAI	GWGCWC	1 cut(s)	587
BsiHKCI	CYCGRG	1 cut(s)	1502
BsiSI	CCGG	2 cut(s)	189, 1841
BslFI	GGGAC	2 cut(s)	275, 443
BslI	CCNNNNNNNGG	5 cut(s)	472, 758, 782, 1114, 1168
BsmAI	GTCTC	3 cut(s)	1252, 1503, 1689
BsmFI	GGGAC	2 cut(s)	275, 443
BsnI	GGCC	4 cut(s)	237, 311, 1200, 1774
BsoBI	CYCGRG	1 cut(s)	1502
Bsp1286I	GDGCHC	5 cut(s)	269, 587, 766, 1233, 1666
Bsp1407I	TGTACA	2 cut(s)	420, 567
Bsp143I	GATC	9 cut(s)	345, 553, 1009, 1363, 1447, 1540, 1681, 1759, 1940
Bsp1720I	GCTNAGC	1 cut(s)	50
BspANI	GGCC	4 cut(s)	237, 311, 1200, 1774
BspCNI	CTCAG	5 cut(s)	63, 739, 1246, 1612, 1815
BspDI	ATCGAT	1 cut(s)	552
BspFNI	CGCG	2 cut(s)	252, 602
BspHI	TCATGA	1 cut(s)	1629
BspLI	GGNNCC	4 cut(s)	268, 765, 1665, 1683
BspPI	GGATC	4 cut(s)	1676, 1689, 1754, 1948
BspT107I	GGYRCC	2 cut(s)	266, 1663
BsrBI	CCGCTC	1 cut(s)	183
BsrDI	GCAATG	1 cut(s)	1872
BsrFI	RCCGGY	2 cut(s)	188, 1840
BsrGI	TGTACA	2 cut(s)	420, 567
BsrI	ACTGG	4 cut(s)	63, 133, 406, 1896
BssAI	RCCGGY	2 cut(s)	188, 1840
BssECI	CCNNGG	6 cut(s)	250, 306, 501, 574, 758, 1108
BssMI	GATC	9 cut(s)	345, 553, 1009, 1363, 1447, 1540, 1681, 1759, 1940
BssNAI	GTATAC	2 cut(s)	1055, 1957
BssNI	GRCGYC	2 cut(s)	258, 516
BssSI	CACGAG	1 cut(s)	991
BssT1I	CCWWGG	3 cut(s)	306, 574, 1108
Bst1107I	GTATAC	2 cut(s)	1055, 1957
Bst2BI	CACGAG	1 cut(s)	991
Bst2UI	CCWGG	3 cut(s)	83, 467, 759
Bst4CI	ACNGT	8 cut(s)	208, 582, 618, 805, 811, 949, 1067, 1595
Bst6I	CTCTTC	2 cut(s)	1079, 1113
BstACI	GRCGYC	2 cut(s)	258, 516
BstAUI	TGTACA	2 cut(s)	420, 567
BstC8I	GCNNGC	5 cut(s)	277, 365, 610, 669, 753
BstDEI	CTNAG	7 cut(s)	50, 747, 1254, 1346, 1620, 1691, 1802
BstDSI	CCRYGG	1 cut(s)	250
BstENI	CCTNNNNNAGG	1 cut(s)	756
BstF5I	GGATG	6 cut(s)	570, 685, 978, 1402, 1728, 1925
BstFNI	CGCG	2 cut(s)	252, 602
BstKTI	GATC	9 cut(s)	348, 556, 1012, 1366, 1450, 1543, 1684, 1762, 1943
BstMAI	GTCTC	3 cut(s)	1252, 1503, 1689
BstMBI	GATC	9 cut(s)	345, 553, 1009, 1363, 1447, 1540, 1681, 1759, 1940
BstMWI	GCNNNNNNNGC	9 cut(s)	369, 503, 515, 618, 734, 761, 983, 1197, 1780
BstNI	CCWGG	3 cut(s)	83, 467, 759
BstNSI	RCATGY	3 cut(s)	367, 427, 1879
BstSCI	CCNGG	3 cut(s)	81, 465, 757
BstSLI	GKGCMC	4 cut(s)	269, 587, 1233, 1666
BstUI	CGCG	2 cut(s)	252, 602
BstV1I	GCAGC	6 cut(s)	493, 857, 920, 923, 961, 998
BstX2I	RGATCY	2 cut(s)	1681, 1940
BstYI	RGATCY	2 cut(s)	1681, 1940
BstZ17I	GTATAC	2 cut(s)	1055, 1957
Bsu15I	ATCGAT	1 cut(s)	552
BsuRI	GGCC	4 cut(s)	237, 311, 1200, 1774
BsuTUI	ATCGAT	1 cut(s)	552
BtgI	CCRYGG	1 cut(s)	250
BtsCI	GGATG	6 cut(s)	570, 685, 978, 1402, 1728, 1925
BtsIMutI	CAGTG	6 cut(s)	587, 623, 1585, 1600, 1889, 1947
Cac8I	GCNNGC	5 cut(s)	277, 365, 610, 669, 753
CaiI	CAGNNNCTG	2 cut(s)	595, 746
CciI	TCATGA	1 cut(s)	1629
Cfr10I	RCCGGY	2 cut(s)	188, 1840
Cfr13I	GGNCC	2 cut(s)	592, 1624
Cfr42I	CCGCGG	1 cut(s)	253
ClaI	ATCGAT	1 cut(s)	552
CseI	GACGC	2 cut(s)	281, 524
CsiI	ACCWGGT	1 cut(s)	465
Csp6I	GTAC	9 cut(s)	66, 352, 421, 568, 674, 827, 865, 898, 1324
CspAI	ACCGGT	1 cut(s)	188
CviQI	GTAC	9 cut(s)	66, 352, 421, 568, 674, 827, 865, 898, 1324
DdeI	CTNAG	7 cut(s)	50, 747, 1254, 1346, 1620, 1691, 1802
DpnI	GATC	9 cut(s)	347, 555, 1011, 1365, 1449, 1542, 1683, 1761, 1942
DpnII	GATC	9 cut(s)	345, 553, 1009, 1363, 1447, 1540, 1681, 1759, 1940
DraI	TTTAAA	1 cut(s)	331
Eam1104I	CTCTTC	2 cut(s)	1079, 1113
EarI	CTCTTC	2 cut(s)	1079, 1113
EciI	GGCGGA	3 cut(s)	148, 661, 765
Eco130I	CCWWGG	3 cut(s)	306, 574, 1108
Eco147I	AGGCCT	1 cut(s)	311
Eco24I	GRGCYC	1 cut(s)	766
Eco47I	GGWCC	2 cut(s)	592, 1624
Eco57I	CTGAAG	1 cut(s)	1734
Eco88I	CYCGRG	1 cut(s)	1502
EcoNI	CCTNNNNNAGG	1 cut(s)	756
EcoO109I	RGGNCCY	2 cut(s)	592, 1624
EcoRI	GAATTC	1 cut(s)	1598
EcoRII	CCWGG	3 cut(s)	81, 465, 757
EcoT14I	CCWWGG	3 cut(s)	306, 574, 1108
EcoT22I	ATGCAT	2 cut(s)	1404, 1730
EcoT38I	GRGCYC	1 cut(s)	766
ErhI	CCWWGG	3 cut(s)	306, 574, 1108
FaqI	GGGAC	2 cut(s)	275, 443
FbaI	TGATCA	1 cut(s)	1009
FblI	GTMKAC	3 cut(s)	231, 1054, 1956
Fnu4HI	GCNGC	9 cut(s)	250, 253, 477, 507, 871, 909, 912, 975, 987
FokI	GGATG	6 cut(s)	557, 672, 965, 1389, 1715, 1912
FriOI	GRGCYC	1 cut(s)	766
Fsp4HI	GCNGC	9 cut(s)	250, 253, 477, 507, 871, 909, 912, 975, 987
FspBI	CTAG	5 cut(s)	879, 1244, 1374, 1431, 1568
GluI	GCNGC	9 cut(s)	250, 253, 477, 507, 871, 909, 912, 975, 987
HaeIII	GGCC	4 cut(s)	237, 311, 1200, 1774
HapII	CCGG	2 cut(s)	189, 1841
HgaI	GACGC	2 cut(s)	281, 524
Hin1I	GRCGYC	2 cut(s)	258, 516
HindIII	AAGCTT	1 cut(s)	1151
HinfI	GANTC	8 cut(s)	383, 454, 559, 1185, 1210, 1317, 1337, 1895
HpaII	CCGG	2 cut(s)	189, 1841
HphI	GGTGA	4 cut(s)	106, 355, 941, 1821
Hpy166II	GTNNAC	5 cut(s)	232, 585, 1045, 1055, 1957
Hpy188III	TCNNGA	9 cut(s)	1070, 1182, 1281, 1302, 1341, 1361, 1502, 1630, 1754
Hpy8I	GTNNAC	5 cut(s)	232, 585, 1045, 1055, 1957
Hpy99I	CGWCG	4 cut(s)	260, 263, 275, 359
HpyAV	CCTTC	8 cut(s)	29, 121, 139, 689, 730, 1019, 1190, 1931
HpyCH4III	ACNGT	8 cut(s)	208, 582, 618, 805, 811, 949, 1067, 1595
HpyCH4IV	ACGT	4 cut(s)	258, 546, 699, 1285
HpyF10VI	GCNNNNNNNGC	9 cut(s)	369, 503, 515, 618, 734, 761, 983, 1197, 1780
HpyF3I	CTNAG	7 cut(s)	50, 747, 1254, 1346, 1620, 1691, 1802
HpySE526I	ACGT	4 cut(s)	258, 546, 699, 1285
Hsp92I	GRCGYC	2 cut(s)	258, 516
Ksp22I	TGATCA	1 cut(s)	1009
KspI	CCGCGG	1 cut(s)	253
Kzo9I	GATC	9 cut(s)	345, 553, 1009, 1363, 1447, 1540, 1681, 1759, 1940
LmnI	GCTCC	3 cut(s)	188, 329, 769
Lsp1109I	GCAGC	6 cut(s)	493, 857, 920, 923, 961, 998
LweI	GCATC	6 cut(s)	694, 1389, 1411, 1603, 1715, 1737
MabI	ACCWGGT	1 cut(s)	465
MaeI	CTAG	5 cut(s)	879, 1244, 1374, 1431, 1568
MaeII	ACGT	4 cut(s)	258, 546, 699, 1285
MaeIII	GTNAC	4 cut(s)	695, 805, 929, 1286
MalI	GATC	9 cut(s)	347, 555, 1011, 1365, 1449, 1542, 1683, 1761, 1942
MbiI	CCGCTC	1 cut(s)	183
MboI	GATC	9 cut(s)	345, 553, 1009, 1363, 1447, 1540, 1681, 1759, 1940
MboII	GAAGA	5 cut(s)	382, 1096, 1130, 1346, 1600
MfeI	CAATTG	1 cut(s)	1268
MflI	RGATCY	2 cut(s)	1681, 1940
MhlI	GDGCHC	5 cut(s)	269, 587, 766, 1233, 1666
MlyI	GAGTC	3 cut(s)	392, 448, 1889
MmeI	TCCRAC	6 cut(s)	83, 195, 402, 1459, 1659, 1860
Mph1103I	ATGCAT	2 cut(s)	1404, 1730
MroXI	GAANNNNTTC	2 cut(s)	1209, 1602
MseI	TTAA	2 cut(s)	330, 1125
MspA1I	CMGCKG	2 cut(s)	252, 1766
MspI	CCGG	2 cut(s)	189, 1841
MspR9I	CCNGG	3 cut(s)	83, 467, 759
MunI	CAATTG	1 cut(s)	1268
MvaI	CCWGG	3 cut(s)	83, 467, 759
MvnI	CGCG	2 cut(s)	252, 602
MwoI	GCNNNNNNNGC	9 cut(s)	369, 503, 515, 618, 734, 761, 983, 1197, 1780
NdeII	GATC	9 cut(s)	345, 553, 1009, 1363, 1447, 1540, 1681, 1759, 1940
NlaIV	GGNNCC	4 cut(s)	268, 765, 1665, 1683
NmuCI	GTSAC	1 cut(s)	929
NsiI	ATGCAT	2 cut(s)	1404, 1730
NspI	RCATGY	3 cut(s)	367, 427, 1879
PaeI	GCATGC	1 cut(s)	367
PagI	TCATGA	1 cut(s)	1629
PceI	AGGCCT	1 cut(s)	311
PciI	ACATGT	2 cut(s)	423, 1875
PcsI	WCGNNNNNNNCGW	1 cut(s)	267
PdmI	GAANNNNTTC	2 cut(s)	1209, 1602
PfeI	GAWTC	5 cut(s)	559, 1185, 1210, 1317, 1337
PflMI	CCANNNNNTGG	1 cut(s)	472
PinAI	ACCGGT	1 cut(s)	188
PkrI	GCNGC	9 cut(s)	251, 254, 478, 508, 872, 910, 913, 976, 988
PleI	GAGTC	3 cut(s)	391, 448, 1889
PpsI	GAGTC	3 cut(s)	391, 448, 1889
PpuMI	RGGWCCY	2 cut(s)	592, 1624
PscI	ACATGT	2 cut(s)	423, 1875
Psp1406I	AACGTT	1 cut(s)	699
Psp5II	RGGWCCY	2 cut(s)	592, 1624
Psp6I	CCWGG	3 cut(s)	81, 465, 757
PspGI	CCWGG	3 cut(s)	81, 465, 757
PspN4I	GGNNCC	4 cut(s)	268, 765, 1665, 1683
PspPI	GGNCC	2 cut(s)	592, 1624
PspPPI	RGGWCCY	2 cut(s)	592, 1624
PsrI	GAACNNNNNNTAC	2 cut(s)	404, 436
PstNI	CAGNNNCTG	2 cut(s)	595, 746
PsuI	RGATCY	2 cut(s)	1681, 1940
PvuII	CAGCTG	1 cut(s)	1766
RsaI	GTAC	9 cut(s)	67, 353, 422, 569, 675, 828, 866, 899, 1325
RsaNI	GTAC	9 cut(s)	66, 352, 421, 568, 674, 827, 865, 898, 1324
SacII	CCGCGG	1 cut(s)	253
SaqAI	TTAA	2 cut(s)	330, 1125
SatI	GCNGC	9 cut(s)	250, 253, 477, 507, 871, 909, 912, 975, 987
Sau3AI	GATC	9 cut(s)	345, 553, 1009, 1363, 1447, 1540, 1681, 1759, 1940
Sau96I	GGNCC	2 cut(s)	592, 1624
SchI	GAGTC	3 cut(s)	392, 448, 1889
ScrFI	CCNGG	3 cut(s)	83, 467, 759
SduI	GDGCHC	5 cut(s)	269, 587, 766, 1233, 1666
SexAI	ACCWGGT	1 cut(s)	465
SfaNI	GCATC	6 cut(s)	694, 1389, 1411, 1603, 1715, 1737
Sfr303I	CCGCGG	1 cut(s)	253
SgrBI	CCGCGG	1 cut(s)	253
SinI	GGWCC	2 cut(s)	592, 1624
SmlI	CTYRAG	1 cut(s)	1455
SmoI	CTYRAG	1 cut(s)	1455
SphI	GCATGC	1 cut(s)	367
SseBI	AGGCCT	1 cut(s)	311
SspMI	CTAG	5 cut(s)	879, 1244, 1374, 1431, 1568
StuI	AGGCCT	1 cut(s)	311
StyD4I	CCNGG	3 cut(s)	81, 465, 757
StyI	CCWWGG	3 cut(s)	306, 574, 1108
TaaI	ACNGT	8 cut(s)	208, 582, 618, 805, 811, 949, 1067, 1595
TaiI	ACGT	4 cut(s)	261, 549, 702, 1288
TaqI	TCGA	3 cut(s)	552, 1446, 1706
TatI	WGTACW	3 cut(s)	420, 567, 897
TauI	GCSGC	3 cut(s)	252, 255, 479
TfiI	GAWTC	5 cut(s)	559, 1185, 1210, 1317, 1337
Tru1I	TTAA	2 cut(s)	330, 1125
Tru9I	TTAA	2 cut(s)	330, 1125
TscAI	CASTG	6 cut(s)	587, 623, 1585, 1600, 1896, 1954
TseFI	GTSAC	1 cut(s)	929
TseI	GCWGC	6 cut(s)	506, 870, 908, 911, 974, 986
Tsp45I	GTSAC	1 cut(s)	929
TspDTI	ATGAA	5 cut(s)	17, 500, 1236, 1347, 1950
TspGWI	ACGGA	5 cut(s)	83, 1130, 1533, 1674, 1918
TspRI	CASTG	6 cut(s)	587, 623, 1585, 1600, 1896, 1954
Van91I	CCANNNNNTGG	1 cut(s)	472
VneI	GTGCAC	1 cut(s)	583
VpaK11BI	GGWCC	2 cut(s)	592, 1624
XagI	CCTNNNNNAGG	1 cut(s)	756
XapI	RAATTY	2 cut(s)	1223, 1598
XceI	RCATGY	3 cut(s)	367, 427, 1879
XmiI	GTMKAC	3 cut(s)	231, 1054, 1956
XmnI	GAANNNNTTC	2 cut(s)	1209, 1602
XspI	CTAG	5 cut(s)	879, 1244, 1374, 1431, 1568
ZraI	GACGTC	1 cut(s)	259
Zsp2I	ATGCAT	2 cut(s)	1404, 1730

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.