MD05G1340300.v1.1

transmembrane receptor protein serine/threonine kinase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
OG0000283
Physical Location & Seq
Reverse (-)
46090271 .. 46091089
819 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1340300.v1.1.491

Sequence Viewer

Length: 819 bp
ATGATCCTTTTGTTGTTTGTCTCCATGCTTAGCTTGCTCAGTTTGATCACCAGTAATGAAACTGGTCAATTTCTAGCCATTAGCTGCCCAAATAACACAACCACTTTCACCTCCAACACTGGCTGGTACTTTCCCACCTTCCACGAGAGCTTCCAATCCAATCTCAACGAAGTCCTCAACACCCTTATCTCTCCCGCTGCCCCTGACACCGGCTTTTACAACACCACGGCGGGCTTAAATTCTACGGAAAAAGCCTACGGCCTCTTTCTCTGCCAAGGATATGTCTCTACCGACGTTTGCAAAGATTGCGTGACTGCTGCAAGCATAATGGCAGCACAACGCTGTGCCTACCGAATAAATGTAATTGTATGGTACGCCCACTGCATGCTACGCTACTCAAACGAGTCCTTATCCACCTTGTACGAATCGCCGTCCATCTCCGCGTGGAACGAGCAGAACGCAACCGAATGGAATCGGTTCAACCAGGTTCTGGGGAAAAGTATGAACGAGGTGGTCACCGAGGCTACTAATACTGCCAACAAGTTTGCAATGAAACAGGCAAATATTAGTAGGTTTCTTTCTGTGTACAGCGTCGCACAGTGCACATGGGATCTGTCTGAAGTGGATTGCAACCGGTGTTTAAAGCTTGCCGTCTCGAGATTGCGGAGCTGTTGTGAAGGAAGGAAAGGGGGACGAGTTTTGATGCCGAGCTGTAACGTTAGGTTTGAAATTTATCCCTTTTACCTCCAAAACGCCACCTCAGAACCGGCGCCTGCACCGAAGGCTCTTCCTCCTCCTGCACCTAAAGGTACCAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase_Tyr Stress-antifung

Protein Analysis

273

Amino Acids

30.15

Weight (kDa)

7.42

Isoelectric Point (pI)

45.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Stress-antifung PF01657 46 - 135 1.2e-20 Salt stress response/antifungal
Stress-antifung PF01657 152 - 244 1.8e-11 Salt stress response/antifungal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000283)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G45860 AT4G05200 AT4G05200 AT4G11521 AT4G11530 AT4G23130 AT4G23130 AT4G23130 AT4G23140 AT4G23140 AT4G23150 AT4G23160 AT4G23170 AT4G23180 AT4G23180 AT4G23180 AT4G23230 AT4G23270 AT4G23270 AT4G23270 AT4G23280 AT4G23280 AT4G23280 AT4G23310 AT4G23310
fragaria_vesca FvH4_3g02772 FvH4_3g02772 FvH4_3g02773 FvH4_3g02773 FvH4_3g02774 FvH4_3g02800 FvH4_3g02820 FvH4_3g02820 FvH4_3g02830
malus_domestica MD00G1101900.v1.1 MD00G1102100.v1.1 MD00G1102200.v1.1 MD01G1098200.v1.1 MD05G1340000.v1.1 MD05G1340300.v1.1 MD07G1014100.v1.1 MD07G1014300.v1.1 MD07G1014400.v1.1 MD07G1014700.v1.1 MD10G1312900.v1.1 MD11G1022600.v1.1 MD11G1291500.v1.1 MD14G1207100.v1.1 MD16G1096600.v1.1
prunus_persica Prupe.4G027300_v2.0.a1 Prupe.4G027400_v2.0.a1 Prupe.4G027700_v2.0.a1 Prupe.4G027800_v2.0.a1
pyrus_communis pycom05g30960 pycom10g00940 pycom10g00950 pycom10g26430 pycom10g26450 pycom10g26460 pycom10g26470 pycom10g26480 pycom10g26490 pycom10g26500 pycom10g26510 pycom10g26570 pycom11g01820 pycom11g04000 pycom14g17130 pycom14g17140 pycom15g28820
rosa_chinensis RchiOBHm_Chr4g0408141 RchiOBHm_Chr5g0004211 RchiOBHm_Chr5g0004231 RchiOBHm_Chr5g0004241 RchiOBHm_Chr5g0004261
rosa_laevigata RLG00000008668 RLG00000008672 RLG00000031212 RLG00000031217
rosa_multiflora Rmu_co8162658.1_g000001 Rmu_co8336297.1_g000001 Rmu_sc0002073.1_g000001 Rmu_sc0004964.1_g000002 Rmu_sc0004964.1_g000003 Rmu_sc0004964.1_g000007 Rmu_sc0006006.1_g000007 Rmu_sc0007868.1_g000015 Rmu_sc0007868.1_g000016 Rmu_sc0007868.1_g000017 Rmu_sc0007868.1_g000021 Rmu_sc0007868.1_g000023 Rmu_sc0019654.1_g000002 Rmu_sc0038540.1_g000001
rosa_roxburghii Rroxscaffold_1G00071450 Rroxscaffold_1G00071460 Rroxscaffold_1G00071470 Rroxscaffold_1G00071560 Rroxscaffold_1G00071720 Rroxscaffold_1G00071770 Rroxscaffold_5G00352640
rosa_rugosa Rorug04G0083700 Rorug04G0410700 Rorug04G0410800 Rorug04G0410900
rosa_samantha Rh4BG145400 Rh4CG154900 Rh4DG141900 Rh5BG037500 Rh5BG037600 Rh5BG037700 Rh5CG041000 Rh5CG041100 Rh5CG041200 Rh5CG041300 Rh5CG041400 Rh5DG037100
rosa_wichuraiana Rw4G012130 Rw5G003450 Rw5G003460 Rw5G003470 Rw5G003480 Rw5G003640 Rw5G003660 Rw5G003670 Rw5G003680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 809
AccB1I GGYRCC 2 cut(s) 769, 809
AccB7I CCANNNNNTGG 1 cut(s) 490
AccII CGCG 1 cut(s) 443
AciI CCGC 4 cut(s) 195, 230, 441, 664
AclI AACGTT 1 cut(s) 717
AclWI GGATC 1 cut(s) 618
AcsI RAATTY 2 cut(s) 238, 729
AcuI CTGAAG 1 cut(s) 639
AcyI GRCGYC 1 cut(s) 770
AfaI GTAC 5 cut(s) 128, 374, 422, 587, 811
AfiI CCNNNNNNNGG 2 cut(s) 209, 490
AgeI ACCGGT 1 cut(s) 633
AgsI TTSAA 2 cut(s) 481, 728
AjnI CCWGG 1 cut(s) 483
AluBI AGCT 6 cut(s) 33, 84, 150, 646, 669, 711
AluI AGCT 6 cut(s) 33, 84, 150, 646, 669, 711
Alw21I GWGCWC 1 cut(s) 605
Alw26I GTCTC 3 cut(s) 25, 289, 658
Alw44I GTGCAC 1 cut(s) 601
AlwI GGATC 1 cut(s) 618
AlwNI CAGNNNCTG 1 cut(s) 490
Ama87I CYCGRG 1 cut(s) 655
AoxI GGCC 1 cut(s) 259
ApaLI GTGCAC 1 cut(s) 601
ApeKI GCWGC 4 cut(s) 84, 197, 317, 332
ApoI RAATTY 2 cut(s) 238, 729
AsiGI ACCGGT 1 cut(s) 633
Asp700I GAANNNNTTC 1 cut(s) 476
Asp718I GGTACC 1 cut(s) 809
AspLEI GCGC 1 cut(s) 772
AsuHPI GGTGA 3 cut(s) 40, 100, 508
AvaI CYCGRG 1 cut(s) 655
BaeGI GKGCMC 1 cut(s) 605
BanI GGYRCC 2 cut(s) 769, 809
BauI CACGAG 1 cut(s) 143
Bbv12I GWGCWC 1 cut(s) 605
BbvI GCAGC 4 cut(s) 71, 184, 304, 344
BccI CCATC 1 cut(s) 443
BceAI ACGGC 4 cut(s) 243, 274, 415, 635
BciT130I CCWGG 1 cut(s) 485
BclI TGATCA 1 cut(s) 45
BcoDI GTCTC 3 cut(s) 25, 289, 658
BfaI CTAG 1 cut(s) 74
BfoI RGCGCY 1 cut(s) 773
BisI GCNGC 4 cut(s) 85, 198, 318, 333
BlpI GCTNAGC 1 cut(s) 29
BlsI GCNGC 4 cut(s) 86, 199, 319, 334
Bme1390I CCNGG 1 cut(s) 485
BmeT110I CYCGRG 1 cut(s) 655
BmiI GGNNCC 2 cut(s) 771, 811
BmrFI CCNGG 1 cut(s) 485
BmsI GCATC 1 cut(s) 693
Bpu1102I GCTNAGC 1 cut(s) 29
BsaHI GRCGYC 1 cut(s) 770
BsaJI CCNNGG 3 cut(s) 225, 274, 519
BsaWI WCCGGW 1 cut(s) 633
BsaXI ACNNNNNCTCC 2 cut(s) 658, 688
Bsc4I CCNNNNNNNGG 2 cut(s) 209, 490
Bse118I RCCGGY 3 cut(s) 209, 633, 766
Bse1I ACTGG 3 cut(s) 51, 67, 124
Bse3DI GCAATG 1 cut(s) 555
BseBI CCWGG 1 cut(s) 485
BseDI CCNNGG 3 cut(s) 225, 274, 519
BseLI CCNNNNNNNGG 2 cut(s) 209, 490
BseMI GCAATG 1 cut(s) 555
BseMII CTCAG 2 cut(s) 52, 774
BseNI ACTGG 3 cut(s) 51, 67, 124
BseRI GAGGAG 1 cut(s) 783
BseSI GKGCMC 1 cut(s) 605
BseXI GCAGC 4 cut(s) 71, 184, 304, 344
BsgI GTGCAG 2 cut(s) 759, 783
Bsh1236I CGCG 1 cut(s) 443
BshFI GGCC 1 cut(s) 261
BshNI GGYRCC 2 cut(s) 769, 809
BshTI ACCGGT 1 cut(s) 633
BsiHKAI GWGCWC 1 cut(s) 605
BsiHKCI CYCGRG 1 cut(s) 655
BsiSI CCGG 3 cut(s) 210, 634, 767
BslFI GGGAC 1 cut(s) 705
BslI CCNNNNNNNGG 2 cut(s) 209, 490
BsmAI GTCTC 3 cut(s) 25, 289, 658
BsmBI CGTCTC 1 cut(s) 658
BsmFI GGGAC 1 cut(s) 705
BsnI GGCC 1 cut(s) 261
BsoBI CYCGRG 1 cut(s) 655
Bsp1286I GDGCHC 1 cut(s) 605
Bsp1407I TGTACA 1 cut(s) 585
Bsp143I GATC 3 cut(s) 3, 45, 610
Bsp1720I GCTNAGC 1 cut(s) 29
BspACI CCGC 4 cut(s) 195, 230, 441, 664
BspANI GGCC 1 cut(s) 261
BspCNI CTCAG 2 cut(s) 51, 773
BspFNI CGCG 1 cut(s) 443
BspLI GGNNCC 2 cut(s) 771, 811
BspPI GGATC 1 cut(s) 618
BspQI GCTCTTC 1 cut(s) 792
BspT107I GGYRCC 2 cut(s) 769, 809
BsrDI GCAATG 1 cut(s) 555
BsrFI RCCGGY 3 cut(s) 209, 633, 766
BsrGI TGTACA 1 cut(s) 585
BsrI ACTGG 3 cut(s) 51, 67, 124
BssAI RCCGGY 3 cut(s) 209, 633, 766
BssECI CCNNGG 3 cut(s) 225, 274, 519
BssMI GATC 3 cut(s) 3, 45, 610
BssNI GRCGYC 1 cut(s) 770
BssSI CACGAG 1 cut(s) 143
BssT1I CCWWGG 1 cut(s) 274
Bst2BI CACGAG 1 cut(s) 143
Bst2UI CCWGG 1 cut(s) 485
Bst4CI ACNGT 1 cut(s) 600
Bst6I CTCTTC 1 cut(s) 792
BstACI GRCGYC 1 cut(s) 770
BstAPI GCANNNNNTGC 1 cut(s) 306
BstAUI TGTACA 1 cut(s) 585
BstC8I GCNNGC 6 cut(s) 35, 232, 322, 386, 648, 774
BstDEI CTNAG 3 cut(s) 29, 38, 760
BstDSI CCRYGG 1 cut(s) 225
BstEII GGTNACC 1 cut(s) 514
BstFNI CGCG 1 cut(s) 443
BstH2I RGCGCY 1 cut(s) 773
BstHHI GCGC 1 cut(s) 772
BstKTI GATC 3 cut(s) 6, 48, 613
BstMAI GTCTC 3 cut(s) 25, 289, 658
BstMBI GATC 3 cut(s) 3, 45, 610
BstMWI GCNNNNNNNGC 4 cut(s) 34, 306, 390, 782
BstNI CCWGG 1 cut(s) 485
BstNSI RCATGY 1 cut(s) 388
BstPI GGTNACC 1 cut(s) 514
BstSCI CCNGG 1 cut(s) 483
BstSLI GKGCMC 1 cut(s) 605
BstUI CGCG 1 cut(s) 443
BstV1I GCAGC 4 cut(s) 71, 184, 304, 344
BstX2I RGATCY 1 cut(s) 610
BstYI RGATCY 1 cut(s) 610
BsuRI GGCC 1 cut(s) 261
BtgI CCRYGG 1 cut(s) 225
BtsI GCAGTG 1 cut(s) 379
BtsIMutI CAGTG 3 cut(s) 117, 379, 605
Cac8I GCNNGC 6 cut(s) 35, 232, 322, 386, 648, 774
CaiI CAGNNNCTG 1 cut(s) 490
CfoI GCGC 1 cut(s) 772
Cfr10I RCCGGY 3 cut(s) 209, 633, 766
CseI GACGC 1 cut(s) 580
CsiI ACCWGGT 1 cut(s) 483
Csp6I GTAC 5 cut(s) 127, 373, 421, 586, 810
CspAI ACCGGT 1 cut(s) 633
CviAII CATG 3 cut(s) 25, 385, 606
CviQI GTAC 5 cut(s) 127, 373, 421, 586, 810
DdeI CTNAG 3 cut(s) 29, 38, 760
DinI GGCGCC 1 cut(s) 771
DpnI GATC 3 cut(s) 5, 47, 612
DpnII GATC 3 cut(s) 3, 45, 610
DraI TTTAAA 1 cut(s) 642
Eam1104I CTCTTC 1 cut(s) 792
EarI CTCTTC 1 cut(s) 792
Eco130I CCWWGG 1 cut(s) 274
Eco57I CTGAAG 1 cut(s) 639
Eco88I CYCGRG 1 cut(s) 655
Eco91I GGTNACC 1 cut(s) 514
EcoO65I GGTNACC 1 cut(s) 514
EcoRII CCWGG 1 cut(s) 483
EcoT14I CCWWGG 1 cut(s) 274
EgeI GGCGCC 1 cut(s) 771
EheI GGCGCC 1 cut(s) 771
ErhI CCWWGG 1 cut(s) 274
Esp3I CGTCTC 1 cut(s) 658
FaeI CATG 3 cut(s) 28, 388, 609
FaiI YATR 7 cut(s) 26, 282, 326, 370, 386, 503, 607
FaqI GGGAC 1 cut(s) 705
FatI CATG 3 cut(s) 24, 384, 605
FauI CCCGC 2 cut(s) 202, 223
FbaI TGATCA 1 cut(s) 45
Fnu4HI GCNGC 4 cut(s) 85, 198, 318, 333
Fsp4HI GCNGC 4 cut(s) 85, 198, 318, 333
FspBI CTAG 1 cut(s) 74
GlaI GCGC 1 cut(s) 771
GluI GCNGC 4 cut(s) 85, 198, 318, 333
HaeII RGCGCY 1 cut(s) 773
HaeIII GGCC 1 cut(s) 261
HapII CCGG 3 cut(s) 210, 634, 767
HgaI GACGC 1 cut(s) 580
HhaI GCGC 1 cut(s) 772
Hin1I GRCGYC 1 cut(s) 770
Hin1II CATG 3 cut(s) 28, 388, 609
Hin6I GCGC 1 cut(s) 770
HinP1I GCGC 1 cut(s) 770
HindIII AAGCTT 1 cut(s) 644
HinfI GANTC 3 cut(s) 404, 425, 472
HpaII CCGG 3 cut(s) 210, 634, 767
HphI GGTGA 3 cut(s) 40, 100, 508
Hpy166II GTNNAC 2 cut(s) 586, 603
Hpy188I TCNGA 2 cut(s) 619, 763
Hpy188III TCNNGA 2 cut(s) 655, 657
Hpy8I GTNNAC 2 cut(s) 586, 603
Hpy99I CGWCG 2 cut(s) 296, 596
HpyAV CCTTC 4 cut(s) 148, 671, 675, 775
HpyCH4III ACNGT 1 cut(s) 600
HpyCH4IV ACGT 2 cut(s) 294, 717
HpyCH4V TGCA 8 cut(s) 300, 320, 384, 548, 603, 630, 776, 800
HpyF10VI GCNNNNNNNGC 4 cut(s) 34, 306, 390, 782
HpyF3I CTNAG 3 cut(s) 29, 38, 760
HpySE526I ACGT 2 cut(s) 294, 717
Hsp92I GRCGYC 1 cut(s) 770
Hsp92II CATG 3 cut(s) 28, 388, 609
HspAI GCGC 1 cut(s) 770
KasI GGCGCC 1 cut(s) 769
KpnI GGTACC 1 cut(s) 813
Ksp22I TGATCA 1 cut(s) 45
Kzo9I GATC 3 cut(s) 3, 45, 610
LguI GCTCTTC 1 cut(s) 792
LmnI GCTCC 1 cut(s) 666
Lsp1109I GCAGC 4 cut(s) 71, 184, 304, 344
LweI GCATC 1 cut(s) 693
MabI ACCWGGT 1 cut(s) 483
MaeI CTAG 1 cut(s) 74
MaeII ACGT 2 cut(s) 294, 717
MaeIII GTNAC 3 cut(s) 310, 514, 713
MalI GATC 3 cut(s) 5, 47, 612
MboI GATC 3 cut(s) 3, 45, 610
MboII GAAGA 1 cut(s) 779
MfeI CAATTG 1 cut(s) 814
MflI RGATCY 1 cut(s) 610
MhlI GDGCHC 1 cut(s) 605
MluCI AATT 5 cut(s) 68, 238, 363, 729, 814
Mly113I GGCGCC 1 cut(s) 770
MlyI GAGTC 1 cut(s) 413
MmeI TCCRAC 1 cut(s) 138
MnlI CCTC 9 cut(s) 121, 185, 272, 502, 514, 755, 769, 801, 804
MroXI GAANNNNTTC 1 cut(s) 476
MseI TTAA 2 cut(s) 236, 641
MspA1I CMGCKG 1 cut(s) 197
MspI CCGG 3 cut(s) 210, 634, 767
MspR9I CCNGG 1 cut(s) 485
MunI CAATTG 1 cut(s) 814
MvaI CCWGG 1 cut(s) 485
MvnI CGCG 1 cut(s) 443
MwoI GCNNNNNNNGC 4 cut(s) 34, 306, 390, 782
NarI GGCGCC 1 cut(s) 770
NdeII GATC 3 cut(s) 3, 45, 610
NlaIII CATG 3 cut(s) 28, 388, 609
NlaIV GGNNCC 2 cut(s) 771, 811
NmeAIII GCCGAG 1 cut(s) 732
NmuCI GTSAC 2 cut(s) 310, 514
NspI RCATGY 1 cut(s) 388
PaeI GCATGC 1 cut(s) 388
PaeR7I CTCGAG 1 cut(s) 655
PciSI GCTCTTC 1 cut(s) 792
PdmI GAANNNNTTC 1 cut(s) 476
PfeI GAWTC 2 cut(s) 425, 472
PflMI CCANNNNNTGG 1 cut(s) 490
PinAI ACCGGT 1 cut(s) 633
PkrI GCNGC 4 cut(s) 86, 199, 319, 334
PleI GAGTC 1 cut(s) 412
PluTI GGCGCC 1 cut(s) 773
PpsI GAGTC 1 cut(s) 412
Psp1406I AACGTT 1 cut(s) 717
Psp6I CCWGG 1 cut(s) 483
PspEI GGTNACC 1 cut(s) 514
PspGI CCWGG 1 cut(s) 483
PspN4I GGNNCC 2 cut(s) 771, 811
PstNI CAGNNNCTG 1 cut(s) 490
PsuI RGATCY 1 cut(s) 610
RsaI GTAC 5 cut(s) 128, 374, 422, 587, 811
RsaNI GTAC 5 cut(s) 127, 373, 421, 586, 810
SapI GCTCTTC 1 cut(s) 792
SaqAI TTAA 2 cut(s) 236, 641
SatI GCNGC 4 cut(s) 85, 198, 318, 333
Sau3AI GATC 3 cut(s) 3, 45, 610
SchI GAGTC 1 cut(s) 413
ScrFI CCNGG 1 cut(s) 485
SduI GDGCHC 1 cut(s) 605
SexAI ACCWGGT 1 cut(s) 483
SfaNI GCATC 1 cut(s) 693
SfoI GGCGCC 1 cut(s) 771
Sfr274I CTCGAG 1 cut(s) 655
SlaI CTCGAG 1 cut(s) 655
SmlI CTYRAG 1 cut(s) 655
SmoI CTYRAG 1 cut(s) 655
SphI GCATGC 1 cut(s) 388
Sse9I AATT 5 cut(s) 68, 238, 363, 729, 814
SsiI CCGC 4 cut(s) 195, 230, 441, 664
SspDI GGCGCC 1 cut(s) 769
SspI AATATT 1 cut(s) 565
SspMI CTAG 1 cut(s) 74
StyD4I CCNGG 1 cut(s) 483
StyI CCWWGG 1 cut(s) 274
TaaI ACNGT 1 cut(s) 600
TaiI ACGT 2 cut(s) 297, 720
TaqI TCGA 1 cut(s) 656
TasI AATT 5 cut(s) 68, 238, 363, 729, 814
TatI WGTACW 1 cut(s) 585
TfiI GAWTC 2 cut(s) 425, 472
Tru1I TTAA 2 cut(s) 236, 641
Tru9I TTAA 2 cut(s) 236, 641
TscAI CASTG 3 cut(s) 124, 386, 605
TseFI GTSAC 2 cut(s) 310, 514
TseI GCWGC 4 cut(s) 84, 197, 317, 332
Tsp45I GTSAC 2 cut(s) 310, 514
TspDTI ATGAA 3 cut(s) 72, 518, 566
TspGWI ACGGA 1 cut(s) 260
TspRI CASTG 3 cut(s) 124, 386, 605
Van91I CCANNNNNTGG 1 cut(s) 490
VneI GTGCAC 1 cut(s) 601
XapI RAATTY 2 cut(s) 238, 729
XceI RCATGY 1 cut(s) 388
XhoI CTCGAG 1 cut(s) 655
XmnI GAANNNNTTC 1 cut(s) 476
XspI CTAG 1 cut(s) 74
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.