Rw5G003480

Cysteine-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Forward (+)
3267605 .. 3270276
2672 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G003480.1

Sequence Viewer

Length: 2085 bp
ATGGTAACAGGAACTAAGGGAGTAATCATCATGGATGAGAAACAGATCAACATAATGCCTTGTTCTCATGTGCTCATGTCCTTTGTGCTGCTCTCCGTTCTTGGTTTCCATAGCCTCAGCGTCGAAGCTGAAGTTCCTGACATGTCCCATTTCTGTTCAAACACAACAACTTTCACTCCCAACAGCACCTACGAGTCCAATCTCAATCTCCTCCTCTCCTATCTCACCTCCAACGCCACCAATGACCTCGGATTCCACAACACCACAGTCGGCTCCCAAGACCCCGGCACGACTGTTTACGGTTCATTTAATTGCCTTGGTGATGTCACCCCTGAAAAATGTCAAGAATGTGTGTCTACTATAGCCAGAGGAGGAGTCCAAAAGTATTACCCCTTGAGCAAAATCTCATTAATATGGTATGGAGATTGCATGTTACGCTACTCAAACACATCCTTCTTTGGCAACTCGGAGACATCTCCTCAACTTTACTTTTGGAACACGGGGAATATCACTGAGCCTGACCGCTTCATGCCGCTGCTGGGACAAACTCTGAAGAGCTTGGTGCGACCTGCTGCTAGTGCACCTTCAGGTGTGAAAAAACTCAAAACAAAAGAAGTGAACTTCACAGATTTTCAGCCGTTGTACACCCTTGTGCAGTGCACACCAGACCTATCGAGCCTAAGCTGTGAAGGTTGTCTTACAGAAGCTATTGCAGATATTCCAGTTGCTTTTTATGGAAAGCAAGGGGGAGTAGTCTTATGTCCTAGTTGCAATGTTCGATATGAAATCTATCCATTTTACAGAGCTCAAGCTGCCACACCTCCACCAGCGGCATCGCCACCGCCACCATCACTGCTTCTTCCTCCCCCTCCTCCAGGTTCAGTAACGAGATCTCAAGGAAACGACAAAATCTCATCCTTGATCATAGTGGCCATTGTTGTTCCAATTGCCTTGGTGCTTTTCTTGGTTGGCTGCTTTTTTCTAAGAAGAAAGACAAGAAAAAAATATGATGCTTTACAGGGACAGAATGGGGATAATGAAATTACTAATGTGGAGTCATTGCAGTTTGATTTTGCTACAATTGAAGCAGCCACAAACCAGTTCTCTGTTAATAATAGATTAGGGGAAGGTGGCTTTGGAGAGGTTTACAAGGGAACACTCCCTAATGGGCAAGAAATAGCTGTCAAGAGGTTATCTAGAAACTCCGGGCAAGGTGTTGAGCAGTTTAAAAATGAGGTGGTTTTGGTCGCCAAGCTTCAGCACAGAAATTTAGTGAGGCTGCTGGGGTTTTGCTCTGAAGGAGAAGAAAAGATACTTGTTTATGAACTTGTGCAGAACAAAAGCCTTGACCGCTTTTTATTCGACTCGGACATTCAAGTAAAGTTGGATTGGTCAAGCAGATACAAGATTATCAGTGGGATTGCTAGAGGCATTCTCTATCTCCATGAAGATTCTCAGCTGAAAATCATACATCGAGATCTTAAAGCGAGCAACGTATTGTTAGATGGGGAAATGAACCCAAAAATAGCAGATTTTGGCATGGCAAGAATATTTGGAGGTGATCAAACACAAGGAAATACCATAAGGATTGTCGGAACTTATGGTTACATGCCTCCGGAGTATGCAATGCACGGACAATTCTCAGTGAAGTCTGATGTGTACAGTCTTGGTGTCTTAATCTTGGAGATTGTAACTGGCGAGAAGAACACTAGCTTCTATCAATCAGACCGCGGCGAAGACCTGTTGACCTATGCTTGGAAACATTGGAGTGATGGGACGCCAGAAGAATTGTTGGATTCAAATCTGAGAGGTTCTTATTCAAGAAATGAAGCAATCAGATGTATCCATATTGGTTTATTGTGTGTTCAAGAAAATCCAGAGGAGAGACCTACAATGCAAACTATAAATCTCATGCTAAGCAGTTACTCAGTTACTGCGCCATCGCCTCAAAAGCCAGCATTTTGCCTGCATAGTAGAGAAGAGATGAGAATGCCATCAGTAAAGTCTGAATCATCAAATCAACACACTAGCACCTCAGTCTGTTCAGTTAATGAAGCATCAATTACTGAATTATACCCTCGTTAG

Protein Analysis

694

Amino Acids

76.79

Weight (kDa)

5.83

Isoelectric Point (pI)

42.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Stress-antifung PF01657 52 - 149 8.7e-22 Salt stress response/antifungal
Stress-antifung PF01657 168 - 263 2.4e-08 Salt stress response/antifungal
Pkinase PF00069 369 - 635 8.6e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 370 - 636 8.6e-48 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000283)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G45860 AT4G05200 AT4G05200 AT4G11521 AT4G11530 AT4G23130 AT4G23130 AT4G23130 AT4G23140 AT4G23140 AT4G23150 AT4G23160 AT4G23170 AT4G23180 AT4G23180 AT4G23180 AT4G23230 AT4G23270 AT4G23270 AT4G23270 AT4G23280 AT4G23280 AT4G23280 AT4G23310 AT4G23310
fragaria_vesca FvH4_3g02772 FvH4_3g02772 FvH4_3g02773 FvH4_3g02773 FvH4_3g02774 FvH4_3g02800 FvH4_3g02820 FvH4_3g02820 FvH4_3g02830
malus_domestica MD00G1101900.v1.1 MD00G1102100.v1.1 MD00G1102200.v1.1 MD01G1098200.v1.1 MD05G1340000.v1.1 MD05G1340300.v1.1 MD07G1014100.v1.1 MD07G1014300.v1.1 MD07G1014400.v1.1 MD07G1014700.v1.1 MD10G1312900.v1.1 MD11G1022600.v1.1 MD11G1291500.v1.1 MD14G1207100.v1.1 MD16G1096600.v1.1
prunus_persica Prupe.4G027300_v2.0.a1 Prupe.4G027400_v2.0.a1 Prupe.4G027700_v2.0.a1 Prupe.4G027800_v2.0.a1
pyrus_communis pycom05g30960 pycom10g00940 pycom10g00950 pycom10g26430 pycom10g26450 pycom10g26460 pycom10g26470 pycom10g26480 pycom10g26490 pycom10g26500 pycom10g26510 pycom10g26570 pycom11g01820 pycom11g04000 pycom14g17130 pycom14g17140 pycom15g28820
rosa_chinensis RchiOBHm_Chr4g0408141 RchiOBHm_Chr5g0004211 RchiOBHm_Chr5g0004231 RchiOBHm_Chr5g0004241 RchiOBHm_Chr5g0004261
rosa_laevigata RLG00000008668 RLG00000008672 RLG00000031212 RLG00000031217
rosa_multiflora Rmu_co8162658.1_g000001 Rmu_co8336297.1_g000001 Rmu_sc0002073.1_g000001 Rmu_sc0004964.1_g000002 Rmu_sc0004964.1_g000003 Rmu_sc0004964.1_g000007 Rmu_sc0006006.1_g000007 Rmu_sc0007868.1_g000015 Rmu_sc0007868.1_g000016 Rmu_sc0007868.1_g000017 Rmu_sc0007868.1_g000021 Rmu_sc0007868.1_g000023 Rmu_sc0019654.1_g000002 Rmu_sc0038540.1_g000001
rosa_roxburghii Rroxscaffold_1G00071450 Rroxscaffold_1G00071460 Rroxscaffold_1G00071470 Rroxscaffold_1G00071560 Rroxscaffold_1G00071720 Rroxscaffold_1G00071770 Rroxscaffold_5G00352640
rosa_rugosa Rorug04G0083700 Rorug04G0410700 Rorug04G0410800 Rorug04G0410900
rosa_samantha Rh4BG145400 Rh4CG154900 Rh4DG141900 Rh5BG037500 Rh5BG037600 Rh5BG037700 Rh5CG041000 Rh5CG041100 Rh5CG041200 Rh5CG041300 Rh5CG041400 Rh5DG037100
rosa_wichuraiana Rw4G012130 Rw5G003450 Rw5G003460 Rw5G003470 Rw5G003480 Rw5G003640 Rw5G003660 Rw5G003670 Rw5G003680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 577
AccI GTMKAC 1 cut(s) 356
AccII CGCG 1 cut(s) 1731
AccIII TCCGGA 1 cut(s) 1615
AciI CCGC 7 cut(s) 523, 533, 830, 842, 1351, 1729, 1731
AcoI YGGCCR 1 cut(s) 930
AcsI RAATTY 1 cut(s) 1267
AcuI CTGAAG 5 cut(s) 150, 570, 572, 1241, 1317
AcyI GRCGYC 1 cut(s) 1778
AfaI GTAC 2 cut(s) 644, 1661
AfiI CCNNNNNNNGG 3 cut(s) 539, 875, 1755
AflIII ACRYGT 1 cut(s) 141
AgsI TTSAA 6 cut(s) 159, 1085, 1376, 1800, 1821, 1868
AjnI CCWGG 1 cut(s) 874
AjuI GAANNNNNNNTTGG 2 cut(s) 1119, 1151
AleI CACNNNNGTG 1 cut(s) 650
Alw21I GWGCWC 4 cut(s) 75, 583, 662, 808
Alw26I GTCTC 2 cut(s) 464, 1879
Alw44I GTGCAC 2 cut(s) 579, 658
AlwNI CAGNNNCTG 1 cut(s) 1934
Aor13HI TCCGGA 1 cut(s) 1615
AoxI GGCC 1 cut(s) 930
ApaLI GTGCAC 2 cut(s) 579, 658
ApeKI GCWGC 7 cut(s) 88, 535, 572, 812, 972, 1088, 1279
ApoI RAATTY 1 cut(s) 1267
AseI ATTAAT 1 cut(s) 410
AspLEI GCGC 1 cut(s) 1939
AsuC2I CCSGG 2 cut(s) 285, 1207
AsuHPI GGTGA 4 cut(s) 217, 319, 332, 1571
BaeGI GKGCMC 2 cut(s) 583, 662
BalI TGGCCA 1 cut(s) 932
BanII GRGCYC 1 cut(s) 808
BarI GAAGNNNNNNTAC 2 cut(s) 1296, 1328
BbsI GAAGAC 1 cut(s) 1743
Bbv12I GWGCWC 4 cut(s) 75, 583, 662, 808
BbvCI CCTCAGC 1 cut(s) 116
BbvI GCAGC 7 cut(s) 75, 522, 559, 799, 959, 1100, 1266
BccI CCATC 5 cut(s) 856, 1499, 1766, 1948, 2002
BceAI ACGGC 1 cut(s) 622
BciT130I CCWGG 1 cut(s) 876
BciVI GTATCC 1 cut(s) 1853
BclI TGATCA 2 cut(s) 921, 1561
BcnI CCSGG 2 cut(s) 285, 1207
BcoDI GTCTC 2 cut(s) 464, 1879
BfaI CTAG 6 cut(s) 576, 765, 1197, 1425, 1710, 2028
BfmI CTRYAG 1 cut(s) 360
BfuAI ACCTGC 1 cut(s) 577
BfuI GTATCC 1 cut(s) 1853
BglII AGATCT 2 cut(s) 890, 1477
BlpI GCTNAGC 1 cut(s) 1916
Bme1390I CCNGG 3 cut(s) 285, 876, 1207
BmiI GGNNCC 1 cut(s) 274
BmrFI CCNGG 3 cut(s) 285, 876, 1207
BmsI GCATC 3 cut(s) 842, 1000, 2066
BpiI GAAGAC 1 cut(s) 1743
BplI GAGNNNNNCTC 2 cut(s) 1419, 1451
BpmI CTGGAG 1 cut(s) 858
Bpu10I CCTNAGC 2 cut(s) 116, 680
Bpu1102I GCTNAGC 1 cut(s) 1916
BpuEI CTTGAG 3 cut(s) 415, 792, 879
BpuMI CCSGG 2 cut(s) 285, 1207
BsaBI GATNNNNATC 1 cut(s) 1800
BsaHI GRCGYC 1 cut(s) 1778
BsaI GGTCTC 1 cut(s) 1879
BsaJI CCNNGG 5 cut(s) 247, 283, 316, 951, 1729
BsaWI WCCGGW 1 cut(s) 1615
BsaXI ACNNNNNCTCC 2 cut(s) 160, 190
Bsc4I CCNNNNNNNGG 3 cut(s) 539, 875, 1755
Bse1I ACTGG 3 cut(s) 722, 1099, 1699
Bse3DI GCAATG 3 cut(s) 778, 1058, 1632
Bse8I GATNNNNATC 1 cut(s) 1800
BseAI TCCGGA 1 cut(s) 1615
BseBI CCWGG 1 cut(s) 876
BseDI CCNNGG 5 cut(s) 247, 283, 316, 951, 1729
BseGI GGATG 3 cut(s) 40, 449, 914
BseJI GATNNNNATC 1 cut(s) 1800
BseLI CCNNNNNNNGG 3 cut(s) 539, 875, 1755
BseMI GCAATG 3 cut(s) 778, 1058, 1632
BseMII CTCAG 7 cut(s) 130, 504, 1469, 1656, 1796, 1941, 2049
BseNI ACTGG 3 cut(s) 722, 1099, 1699
BseRI GAGGAG 7 cut(s) 200, 203, 384, 387, 468, 861, 1895
BseSI GKGCMC 2 cut(s) 583, 662
BseXI GCAGC 7 cut(s) 75, 522, 559, 799, 959, 1100, 1266
BseYI CCCAGC 2 cut(s) 538, 1282
BsgI GTGCAG 2 cut(s) 674, 1352
Bsh1236I CGCG 1 cut(s) 1731
BshFI GGCC 1 cut(s) 932
BsiHKAI GWGCWC 4 cut(s) 75, 583, 662, 808
BsiSI CCGG 3 cut(s) 285, 1206, 1616
BslFI GGGAC 4 cut(s) 130, 555, 1035, 1789
BslI CCNNNNNNNGG 3 cut(s) 539, 875, 1755
BsmAI GTCTC 2 cut(s) 464, 1879
BsmFI GGGAC 4 cut(s) 130, 555, 1035, 1789
BsmI GAATGC 2 cut(s) 1431, 1995
BsnI GGCC 1 cut(s) 932
Bso31I GGTCTC 1 cut(s) 1879
Bsp1286I GDGCHC 4 cut(s) 75, 583, 662, 808
Bsp13I TCCGGA 1 cut(s) 1615
Bsp1407I TGTACA 2 cut(s) 642, 1659
Bsp143I GATC 5 cut(s) 45, 890, 921, 1477, 1561
Bsp1720I GCTNAGC 1 cut(s) 1916
BspACI CCGC 7 cut(s) 523, 533, 830, 842, 1351, 1729, 1731
BspANI GGCC 1 cut(s) 932
BspCNI CTCAG 7 cut(s) 129, 505, 1468, 1655, 1797, 1940, 2048
BspEI TCCGGA 1 cut(s) 1615
BspFNI CGCG 1 cut(s) 1731
BspLI GGNNCC 1 cut(s) 274
BspMI ACCTGC 1 cut(s) 577
BspQI GCTCTTC 1 cut(s) 548
BspTNI GGTCTC 1 cut(s) 1879
BsrDI GCAATG 3 cut(s) 778, 1058, 1632
BsrGI TGTACA 2 cut(s) 642, 1659
BsrI ACTGG 3 cut(s) 722, 1099, 1699
BssECI CCNNGG 5 cut(s) 247, 283, 316, 951, 1729
BssMI GATC 5 cut(s) 45, 890, 921, 1477, 1561
BssNI GRCGYC 1 cut(s) 1778
BssT1I CCWWGG 2 cut(s) 316, 951
Bst2UI CCWGG 1 cut(s) 876
Bst4CI ACNGT 4 cut(s) 268, 295, 302, 1664
Bst6I CTCTTC 2 cut(s) 548, 1974
BstACI GRCGYC 1 cut(s) 1778
BstAUI TGTACA 2 cut(s) 642, 1659
BstC8I GCNNGC 3 cut(s) 1489, 1956, 1967
BstDSI CCRYGG 1 cut(s) 1729
BstENI CCTNNNNNAGG 1 cut(s) 873
BstF5I GGATG 3 cut(s) 40, 449, 914
BstFNI CGCG 1 cut(s) 1731
BstHHI GCGC 1 cut(s) 1939
BstKTI GATC 5 cut(s) 48, 893, 924, 1480, 1564
BstMAI GTCTC 2 cut(s) 464, 1879
BstMBI GATC 5 cut(s) 45, 890, 921, 1477, 1561
BstMWI GCNNNNNNNGC 5 cut(s) 435, 578, 812, 1350, 1951
BstNI CCWGG 1 cut(s) 876
BstNSI RCATGY 3 cut(s) 145, 433, 1612
BstSCI CCNGG 3 cut(s) 283, 874, 1205
BstSFI CTRYAG 1 cut(s) 360
BstSLI GKGCMC 2 cut(s) 583, 662
BstUI CGCG 1 cut(s) 1731
BstV1I GCAGC 7 cut(s) 75, 522, 559, 799, 959, 1100, 1266
BstV2I GAAGAC 1 cut(s) 1743
BstX2I RGATCY 2 cut(s) 890, 1477
BstYI RGATCY 2 cut(s) 890, 1477
BsuI GTATCC 1 cut(s) 1853
BsuRI GGCC 1 cut(s) 932
BtgI CCRYGG 1 cut(s) 1729
BtgZI GCGATG 2 cut(s) 819, 1926
BtsCI GGATG 3 cut(s) 40, 449, 914
BtsI GCAGTG 2 cut(s) 662, 851
BtsIMutI CAGTG 5 cut(s) 510, 662, 851, 1420, 1650
BveI ACCTGC 1 cut(s) 577
Cac8I GCNNGC 3 cut(s) 1489, 1956, 1967
CaiI CAGNNNCTG 1 cut(s) 1934
CfoI GCGC 1 cut(s) 1939
Cfr42I CCGCGG 1 cut(s) 1732
CseI GACGC 2 cut(s) 109, 1786
Csp6I GTAC 2 cut(s) 643, 1660
CviQI GTAC 2 cut(s) 643, 1660
DpnI GATC 5 cut(s) 47, 892, 923, 1479, 1563
DpnII GATC 5 cut(s) 45, 890, 921, 1477, 1561
DraI TTTAAA 1 cut(s) 1228
EaeI YGGCCR 1 cut(s) 930
Eam1104I CTCTTC 2 cut(s) 548, 1974
EarI CTCTTC 2 cut(s) 548, 1974
Ecl136II GAGCTC 1 cut(s) 806
Eco130I CCWWGG 2 cut(s) 316, 951
Eco24I GRGCYC 1 cut(s) 808
Eco31I GGTCTC 1 cut(s) 1879
Eco53kI GAGCTC 1 cut(s) 806
Eco57I CTGAAG 5 cut(s) 150, 570, 572, 1241, 1317
EcoICRI GAGCTC 1 cut(s) 806
EcoNI CCTNNNNNAGG 1 cut(s) 873
EcoRII CCWGG 1 cut(s) 874
EcoT14I CCWWGG 2 cut(s) 316, 951
EcoT38I GRGCYC 1 cut(s) 808
ErhI CCWWGG 2 cut(s) 316, 951
FalI AAGNNNNNCTT 2 cut(s) 681, 713
FaqI GGGAC 4 cut(s) 130, 555, 1035, 1789
FbaI TGATCA 2 cut(s) 921, 1561
FblI GTMKAC 1 cut(s) 356
FokI GGATG 3 cut(s) 47, 436, 901
FriOI GRGCYC 1 cut(s) 808
FspBI CTAG 6 cut(s) 576, 765, 1197, 1425, 1710, 2028
GlaI GCGC 1 cut(s) 1938
GsaI CCCAGC 2 cut(s) 542, 1286
GsuI CTGGAG 1 cut(s) 858
HaeIII GGCC 1 cut(s) 932
HapII CCGG 3 cut(s) 285, 1206, 1616
HgaI GACGC 2 cut(s) 109, 1786
HhaI GCGC 1 cut(s) 1939
Hin1I GRCGYC 1 cut(s) 1778
Hin6I GCGC 1 cut(s) 1937
HinP1I GCGC 1 cut(s) 1937
HincII GTYRAC 1 cut(s) 1746
HindII GTYRAC 1 cut(s) 1746
HindIII AAGCTT 1 cut(s) 1253
HinfI GANTC 8 cut(s) 194, 252, 375, 1055, 1364, 1451, 1796, 2009
HpaII CCGG 3 cut(s) 285, 1206, 1616
HphI GGTGA 4 cut(s) 217, 319, 332, 1571
Hpy166II GTNNAC 9 cut(s) 298, 357, 581, 619, 645, 660, 1147, 1660, 1746
Hpy188III TCNNGA 9 cut(s) 137, 344, 1186, 1197, 1475, 1616, 1821, 1868, 1877
Hpy8I GTNNAC 9 cut(s) 298, 357, 581, 619, 645, 660, 1147, 1660, 1746
Hpy99I CGWCG 1 cut(s) 125
HpyAV CCTTC 5 cut(s) 463, 594, 683, 1121, 1292
HpyCH4III ACNGT 4 cut(s) 268, 295, 302, 1664
HpyCH4IV ACGT 1 cut(s) 1494
HpyF10VI GCNNNNNNNGC 5 cut(s) 435, 578, 812, 1350, 1951
HpySE526I ACGT 1 cut(s) 1494
Hsp92I GRCGYC 1 cut(s) 1778
HspAI GCGC 1 cut(s) 1937
Kpn2I TCCGGA 1 cut(s) 1615
Ksp22I TGATCA 2 cut(s) 921, 1561
KspI CCGCGG 1 cut(s) 1732
Kzo9I GATC 5 cut(s) 45, 890, 921, 1477, 1561
LguI GCTCTTC 1 cut(s) 548
LmnI GCTCC 1 cut(s) 278
Lsp1109I GCAGC 7 cut(s) 75, 522, 559, 799, 959, 1100, 1266
LweI GCATC 3 cut(s) 842, 1000, 2066
MaeI CTAG 6 cut(s) 576, 765, 1197, 1425, 1710, 2028
MaeII ACGT 1 cut(s) 1494
MaeIII GTNAC 8 cut(s) 4, 325, 432, 883, 1604, 1690, 1922, 1930
MalI GATC 5 cut(s) 47, 892, 923, 1479, 1563
MboI GATC 5 cut(s) 45, 890, 921, 1477, 1561
MboII GAAGA 9 cut(s) 565, 851, 999, 1316, 1460, 1714, 1748, 1796, 1991
MfeI CAATTG 2 cut(s) 945, 1080
MflI RGATCY 2 cut(s) 890, 1477
MhlI GDGCHC 4 cut(s) 75, 583, 662, 808
MlsI TGGCCA 1 cut(s) 932
MluCI AATT 9 cut(s) 310, 945, 1041, 1080, 1267, 1637, 1787, 2061, 2069
MluNI TGGCCA 1 cut(s) 932
MlyI GAGTC 4 cut(s) 203, 384, 1064, 1358
MmeI TCCRAC 4 cut(s) 255, 1365, 1573, 1773
Mox20I TGGCCA 1 cut(s) 932
MroI TCCGGA 1 cut(s) 1615
MscI TGGCCA 1 cut(s) 932
MseI TTAA 7 cut(s) 309, 410, 1110, 1227, 1482, 1676, 2049
MslI CAYNNNNRTG 3 cut(s) 412, 650, 1767
Msp20I TGGCCA 1 cut(s) 932
MspA1I CMGCKG 4 cut(s) 535, 830, 1459, 1731
MspI CCGG 3 cut(s) 285, 1206, 1616
MspR9I CCNGG 3 cut(s) 285, 876, 1207
MunI CAATTG 2 cut(s) 945, 1080
Mva1269I GAATGC 2 cut(s) 1431, 1995
MvaI CCWGG 1 cut(s) 876
MvnI CGCG 1 cut(s) 1731
MwoI GCNNNNNNNGC 5 cut(s) 435, 578, 812, 1350, 1951
NciI CCSGG 2 cut(s) 285, 1207
NdeII GATC 5 cut(s) 45, 890, 921, 1477, 1561
NlaIV GGNNCC 1 cut(s) 274
NmuCI GTSAC 1 cut(s) 325
NspI RCATGY 3 cut(s) 145, 433, 1612
OliI CACNNNNGTG 1 cut(s) 650
PciI ACATGT 1 cut(s) 141
PciSI GCTCTTC 1 cut(s) 548
PctI GAATGC 2 cut(s) 1431, 1995
PfeI GAWTC 4 cut(s) 252, 1451, 1796, 2009
PleI GAGTC 4 cut(s) 202, 383, 1063, 1358
PpsI GAGTC 4 cut(s) 202, 383, 1063, 1358
PscI ACATGT 1 cut(s) 141
PshBI ATTAAT 1 cut(s) 410
Psp124BI GAGCTC 1 cut(s) 808
Psp6I CCWGG 1 cut(s) 874
PspFI CCCAGC 2 cut(s) 538, 1282
PspGI CCWGG 1 cut(s) 874
PspN4I GGNNCC 1 cut(s) 274
PstNI CAGNNNCTG 1 cut(s) 1934
PsuI RGATCY 2 cut(s) 890, 1477
PvuII CAGCTG 1 cut(s) 1459
RsaI GTAC 2 cut(s) 644, 1661
RsaNI GTAC 2 cut(s) 643, 1660
RseI CAYNNNNRTG 3 cut(s) 412, 650, 1767
SacI GAGCTC 1 cut(s) 808
SacII CCGCGG 1 cut(s) 1732
SapI GCTCTTC 1 cut(s) 548
SaqAI TTAA 7 cut(s) 309, 410, 1110, 1227, 1482, 1676, 2049
Sau3AI GATC 5 cut(s) 45, 890, 921, 1477, 1561
SchI GAGTC 4 cut(s) 203, 384, 1064, 1358
ScrFI CCNGG 3 cut(s) 285, 876, 1207
SduI GDGCHC 4 cut(s) 75, 583, 662, 808
SfaNI GCATC 3 cut(s) 842, 1000, 2066
SfcI CTRYAG 1 cut(s) 360
Sfr303I CCGCGG 1 cut(s) 1732
SgrBI CCGCGG 1 cut(s) 1732
SmiMI CAYNNNNRTG 3 cut(s) 412, 650, 1767
SmlI CTYRAG 3 cut(s) 394, 807, 894
SmoI CTYRAG 3 cut(s) 394, 807, 894
Sse9I AATT 9 cut(s) 310, 945, 1041, 1080, 1267, 1637, 1787, 2061, 2069
SsiI CCGC 7 cut(s) 523, 533, 830, 842, 1351, 1729, 1731
SspI AATATT 1 cut(s) 1551
SspMI CTAG 6 cut(s) 576, 765, 1197, 1425, 1710, 2028
SstI GAGCTC 1 cut(s) 808
StyD4I CCNGG 3 cut(s) 283, 874, 1205
StyI CCWWGG 2 cut(s) 316, 951
TaaI ACNGT 4 cut(s) 268, 295, 302, 1664
TaiI ACGT 1 cut(s) 1497
TaqI TCGA 5 cut(s) 123, 674, 778, 1362, 1474
TasI AATT 9 cut(s) 310, 945, 1041, 1080, 1267, 1637, 1787, 2061, 2069
TatI WGTACW 2 cut(s) 642, 1659
TauI GCSGC 3 cut(s) 535, 833, 1734
TfiI GAWTC 4 cut(s) 252, 1451, 1796, 2009
Tru1I TTAA 7 cut(s) 309, 410, 1110, 1227, 1482, 1676, 2049
Tru9I TTAA 7 cut(s) 309, 410, 1110, 1227, 1482, 1676, 2049
TscAI CASTG 5 cut(s) 517, 662, 858, 1420, 1650
TseFI GTSAC 1 cut(s) 325
TseI GCWGC 7 cut(s) 88, 535, 572, 812, 972, 1088, 1279
Tsp45I GTSAC 1 cut(s) 325
TspDTI ATGAA 9 cut(s) 294, 517, 798, 1053, 1338, 1461, 1529, 1842, 2067
TspGWI ACGGA 2 cut(s) 85, 1647
TspRI CASTG 5 cut(s) 517, 662, 858, 1420, 1650
VneI GTGCAC 2 cut(s) 579, 658
VspI ATTAAT 1 cut(s) 410
XagI CCTNNNNNAGG 1 cut(s) 873
XapI RAATTY 1 cut(s) 1267
XbaI TCTAGA 1 cut(s) 1196
XceI RCATGY 3 cut(s) 145, 433, 1612
XmiI GTMKAC 1 cut(s) 356
XspI CTAG 6 cut(s) 576, 765, 1197, 1425, 1710, 2028
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.