Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0000283

Physical Location & Seq

Genomic Coordinates Reverse (-)

92281120 .. 92283767

Gene Structure 2648 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00071460.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1875 bp

ATGATTATCATAAAGTCTACTAATCTGTTCACGGACCTTGTGGTGCTTTCCATTCTTGGCTTCCTTAGCGTTAGCGTTGAAGCTCAAGCACCAACTTACCGGTATCATTTCTGTTCAAACACAACCAATTTCACTCCCAACGGCTCCTACCAGTCTAATCTCAATCTCCTCCTCTCTTCTCTCACATCCAACGCCACACGTGATATTGGATTTTACTACACCACCGCGGGGGTGCAAGGCTCCACTGCAGAAGTAGTTTACGGTTCTTTCCTATGCCGTGGAGATCTCACCCCCAAGTTGTGCCAAGAATGTGTTACTACTGTAGCCAAAGATGTTGTCCAACAGTACTGCCCCTTGGGAAAAATCGCAATAATATGGTACGACGAGTGCATGTTGCGCTACGCAAACCAGTCTTACTTGAACAGAATGGACGAAGCTCCTCGAGTTTCCATGTGGAACATTGGGAATATCACTGACCCTACCAGCTTTACGCAGCTGGTGGCAGAAACAATCAATGGCTTGGTGGCTCCGGCTTCAAATGAACCCTCCGGTGCTAAAAAGTATGCAACAAAAGAAGCAGCTTTCAATGGGTTTCAGCAGTTGTACAGCCTTGTGCAGTGCACACCAGACCTATCAAGCACAAGTTGTGTTACATGTCTTCGAGGAGCTATTGCGCAACTTCCAGGTTGTTGTACTGGAAAGCAAGGCGGTAGAGTTTTATATCCCAGTTGTAATGTTCGATATGAAGTTTATCCATTTTATACAGCTGAAGCTGCCACACCTTCATCACCGCCACAACCTTTGACTCTTCCTCCCCCACCTCCAGGAAACGACAAAATCTCATCCCTAATCATAGTGGCCATTGTTGTTCCAATTGCCATAGTGCTTTTCTTGGTAGGCTGCTTTTTTCTAAGAAGAAATGCAAGAAAAACGTATGATGCTTTACAAGAACAAAATGTGGGGAATGAAATTTCTACTGTGGAGTCATTGCAGTTTGATTTTGCTACAATTGAAGCAGCCACAAACCAGTTTTCTGTTAATAACAGATTAGGGAAGGGAACACTTCCTAATGGGCAAGAAATAGCTGTGAAGAGGTTATCTAGAAGCTCCGGGCAAGGTGTTGAGGAGTTTAAAAATGAGGTGGTTTTGGTCGCCAAGCTTCAGCACAGAAATTTAGTGAGGCTACTGGGATTTTGCTCTGAAGGAGTAGAAAAGATACTTATCTATGAATTTGTGCAGAACAAAAGCCTTGACCACTTTTTATTTGACTCGGATATTCAAGTAAAGTTGGATTGGTCAAGTAGATACAAGATTATAGGTGGGATTGCTAGAGGGATTCTCTATCTCCATCAAGATTCTCGGGTTAAAATCATACATCGCGATCTCAAAGCAAGCAACATATTGTTAGATGGAGAAATGAACCCAAAAATATCAGATTTTGGAATGGCAAGAATATTTGGAGTTGATCAAACTCAAGGAAGCACCAGAAGGATTGTCGGAACTTATGGTTACATGTCCCCAGAGTATGCAATGCATGGACAGTTCTCAGAGAAGTCTGATGTGTACAGTCTTGGTGTCTTAATCTTAGAGATTGTAACAGGCAAGAAAAACACTAGTTTCTATCAATCAGACCGTGGCGAAGATCTCTTAACATATGAAGATCCAAAGGAGAGACCTACTATGCAAACCATTGTTCTCATGCTAAGCAGTTACTCAGTTACTATGCCTTTGCCTGAAAAGCCAGCGTTTTTGTTGCATAGTAAAGCAGAGTTGAACATGCCATCAGTAGCCTCTGGATCATCATATCAACCCACTAGCAGCTCAGTCTCATGTTCTGTTAATGATGTTTCAATTACTGAATTATTCCCTCGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009617 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0042742 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050896 GO:0051704 GO:0051707 GO:0071704 GO:0071944 GO:0098542 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase_Tyr Stress-antifung

Protein Analysis

624

Amino Acids

68.83

Weight (kDa)

6.43

Isoelectric Point (pI)

43.36

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Stress-antifung	PF01657	38 - 137	8e-25	Salt stress response/antifungal
Stress-antifung	PF01657	156 - 250	5e-12	Salt stress response/antifungal
PK_Tyr_Ser-Thr	PF07714	357 - 542	4.2e-39	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	357 - 538	1.4e-37	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000283)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G45860 AT4G05200 AT4G05200 AT4G11521 AT4G11530 AT4G23130 AT4G23130 AT4G23130 AT4G23140 AT4G23140 AT4G23150 AT4G23160 AT4G23170 AT4G23180 AT4G23180 AT4G23180 AT4G23230 AT4G23270 AT4G23270 AT4G23270 AT4G23280 AT4G23280 AT4G23280 AT4G23310 AT4G23310
fragaria_vesca	FvH4_3g02772 FvH4_3g02772 FvH4_3g02773 FvH4_3g02773 FvH4_3g02774 FvH4_3g02800 FvH4_3g02820 FvH4_3g02820 FvH4_3g02830
malus_domestica	MD00G1101900.v1.1 MD00G1102100.v1.1 MD00G1102200.v1.1 MD01G1098200.v1.1 MD05G1340000.v1.1 MD05G1340300.v1.1 MD07G1014100.v1.1 MD07G1014300.v1.1 MD07G1014400.v1.1 MD07G1014700.v1.1 MD10G1312900.v1.1 MD11G1022600.v1.1 MD11G1291500.v1.1 MD14G1207100.v1.1 MD16G1096600.v1.1
prunus_persica	Prupe.4G027300_v2.0.a1 Prupe.4G027400_v2.0.a1 Prupe.4G027700_v2.0.a1 Prupe.4G027800_v2.0.a1
pyrus_communis	pycom05g30960 pycom10g00940 pycom10g00950 pycom10g26430 pycom10g26450 pycom10g26460 pycom10g26470 pycom10g26480 pycom10g26490 pycom10g26500 pycom10g26510 pycom10g26570 pycom11g01820 pycom11g04000 pycom14g17130 pycom14g17140 pycom15g28820
rosa_chinensis	RchiOBHm_Chr4g0408141 RchiOBHm_Chr5g0004211 RchiOBHm_Chr5g0004231 RchiOBHm_Chr5g0004241 RchiOBHm_Chr5g0004261
rosa_laevigata	RLG00000008668 RLG00000008672 RLG00000031212 RLG00000031217
rosa_multiflora	Rmu_co8162658.1_g000001 Rmu_co8336297.1_g000001 Rmu_sc0002073.1_g000001 Rmu_sc0004964.1_g000002 Rmu_sc0004964.1_g000003 Rmu_sc0004964.1_g000007 Rmu_sc0006006.1_g000007 Rmu_sc0007868.1_g000015 Rmu_sc0007868.1_g000016 Rmu_sc0007868.1_g000017 Rmu_sc0007868.1_g000021 Rmu_sc0007868.1_g000023 Rmu_sc0019654.1_g000002 Rmu_sc0038540.1_g000001
rosa_roxburghii	Rroxscaffold_1G00071450 Rroxscaffold_1G00071460 Rroxscaffold_1G00071470 Rroxscaffold_1G00071560 Rroxscaffold_1G00071720 Rroxscaffold_1G00071770 Rroxscaffold_5G00352640
rosa_rugosa	Rorug04G0083700 Rorug04G0410700 Rorug04G0410800 Rorug04G0410900
rosa_samantha	Rh4BG145400 Rh4CG154900 Rh4DG141900 Rh5BG037500 Rh5BG037600 Rh5BG037700 Rh5CG041000 Rh5CG041100 Rh5CG041200 Rh5CG041300 Rh5CG041400 Rh5DG037100
rosa_wichuraiana	Rw4G012130 Rw5G003450 Rw5G003460 Rw5G003470 Rw5G003480 Rw5G003640 Rw5G003660 Rw5G003670 Rw5G003680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	675
AccI	GTMKAC	1 cut(s)	17
AccII	CGCG	2 cut(s)	227, 1380
AciI	CCGC	4 cut(s)	225, 227, 708, 791
AclWI	GGATC	2 cut(s)	1655, 1804
AcoI	YGGCCR	1 cut(s)	858
AcsI	RAATTY	3 cut(s)	969, 1171, 1229
AcuI	CTGAAG	3 cut(s)	789, 1145, 1221
AcvI	CACGTG	1 cut(s)	200
AfaI	GTAC	5 cut(s)	347, 380, 605, 694, 1565
AfiI	CCNNNNNNNGG	2 cut(s)	228, 824
AflIII	ACRYGT	3 cut(s)	197, 653, 1512
AgeI	ACCGGT	1 cut(s)	99
AgsI	TTSAA	9 cut(s)	80, 117, 421, 537, 586, 1013, 1280, 1774, 1851
AhlI	ACTAGT	1 cut(s)	1613
AjnI	CCWGG	2 cut(s)	682, 823
Alw21I	GWGCWC	1 cut(s)	623
Alw26I	GTCTC	2 cut(s)	1666, 1831
Alw44I	GTGCAC	1 cut(s)	619
AlwI	GGATC	2 cut(s)	1655, 1804
Ama87I	CYCGRG	2 cut(s)	441, 1359
AoxI	GGCC	1 cut(s)	858
ApaLI	GTGCAC	1 cut(s)	619
ApeKI	GCWGC	6 cut(s)	493, 578, 773, 900, 1016, 1818
ApoI	RAATTY	3 cut(s)	969, 1171, 1229
ArsI	GACNNNNNNTTYG	2 cut(s)	321, 353
AsiGI	ACCGGT	1 cut(s)	99
AspLEI	GCGC	2 cut(s)	399, 676
AspS9I	GGNCC	1 cut(s)	34
AsuC2I	CCSGG	1 cut(s)	1111
AsuHPI	GGTGA	2 cut(s)	280, 780
AvaI	CYCGRG	2 cut(s)	441, 1359
AvaII	GGWCC	1 cut(s)	34
BaeGI	GKGCMC	1 cut(s)	623
BalI	TGGCCA	1 cut(s)	860
BbrPI	CACGTG	1 cut(s)	200
BbsI	GAAGAC	1 cut(s)	650
Bbv12I	GWGCWC	1 cut(s)	623
BbvI	GCAGC	6 cut(s)	505, 590, 760, 887, 1028, 1830
BccI	CCATC	3 cut(s)	1356, 1403, 1789
BceAI	ACGGC	2 cut(s)	157, 261
BciT130I	CCWGG	2 cut(s)	684, 825
BclI	TGATCA	1 cut(s)	1465
BcnI	CCSGG	1 cut(s)	1111
BcoDI	GTCTC	2 cut(s)	1666, 1831
BcuI	ACTAGT	1 cut(s)	1613
BfaI	CTAG	4 cut(s)	1101, 1329, 1614, 1815
BfmI	CTRYAG	2 cut(s)	246, 321
BglII	AGATCT	2 cut(s)	283, 1642
BisI	GCNGC	6 cut(s)	494, 579, 774, 901, 1017, 1819
BlpI	GCTNAGC	1 cut(s)	1703
BlsI	GCNGC	6 cut(s)	495, 580, 775, 902, 1018, 1820
BmcAI	AGTACT	1 cut(s)	347
Bme1390I	CCNGG	3 cut(s)	684, 825, 1111
Bme18I	GGWCC	1 cut(s)	34
BmeT110I	CYCGRG	2 cut(s)	441, 1359
BmgT120I	GGNCC	1 cut(s)	34
BmiI	GGNNCC	3 cut(s)	145, 241, 528
BmrFI	CCNGG	3 cut(s)	684, 825, 1111
BmrI	ACTGGG	2 cut(s)	720, 1196
BmsI	GCATC	1 cut(s)	928
BmuI	ACTGGG	2 cut(s)	720, 1196
BpiI	GAAGAC	1 cut(s)	650
BplI	GAGNNNNNCTC	2 cut(s)	1323, 1355
BpmI	CTGGAG	1 cut(s)	807
Bpu10I	CCTNAGC	1 cut(s)	65
Bpu1102I	GCTNAGC	1 cut(s)	1703
BpuEI	CTTGAG	2 cut(s)	69, 1458
BpuMI	CCSGG	1 cut(s)	1111
BsaAI	YACGTR	1 cut(s)	200
BsaBI	GATNNNNATC	1 cut(s)	1220
BsaI	GGTCTC	1 cut(s)	1666
BsaJI	CCNNGG	4 cut(s)	225, 277, 354, 1633
BsaWI	WCCGGW	2 cut(s)	99, 548
BsaXI	ACNNNNNCTCC	2 cut(s)	796, 826
Bsc4I	CCNNNNNNNGG	2 cut(s)	228, 824
Bse118I	RCCGGY	1 cut(s)	99
Bse1I	ACTGG	6 cut(s)	151, 409, 700, 726, 1027, 1191
Bse3DI	GCAATG	2 cut(s)	986, 1536
Bse8I	GATNNNNATC	1 cut(s)	1220
BseBI	CCWGG	2 cut(s)	684, 825
BseDI	CCNNGG	4 cut(s)	225, 277, 354, 1633
BseGI	GGATG	2 cut(s)	185, 842
BseJI	GATNNNNATC	1 cut(s)	1220
BseLI	CCNNNNNNNGG	2 cut(s)	228, 824
BseMI	GCAATG	2 cut(s)	986, 1536
BseMII	CTCAG	3 cut(s)	1560, 1728, 1836
BseNI	ACTGG	6 cut(s)	151, 409, 700, 726, 1027, 1191
BseRI	GAGGAG	5 cut(s)	158, 161, 429, 678, 1139
BseSI	GKGCMC	1 cut(s)	623
BseXI	GCAGC	6 cut(s)	505, 590, 760, 887, 1028, 1830
BsgI	GTGCAG	2 cut(s)	635, 1256
Bsh1236I	CGCG	2 cut(s)	227, 1380
BshFI	GGCC	1 cut(s)	860
BshTI	ACCGGT	1 cut(s)	99
BsiHKAI	GWGCWC	1 cut(s)	623
BsiHKCI	CYCGRG	2 cut(s)	441, 1359
BsiSI	CCGG	4 cut(s)	100, 530, 549, 1110
BslFI	GGGAC	1 cut(s)	1501
BslI	CCNNNNNNNGG	2 cut(s)	228, 824
BsmAI	GTCTC	2 cut(s)	1666, 1831
BsmFI	GGGAC	1 cut(s)	1501
BsnI	GGCC	1 cut(s)	860
Bso31I	GGTCTC	1 cut(s)	1666
BsoBI	CYCGRG	2 cut(s)	441, 1359
Bsp1286I	GDGCHC	1 cut(s)	623
Bsp1407I	TGTACA	2 cut(s)	603, 1563
Bsp143I	GATC	6 cut(s)	283, 1381, 1465, 1642, 1660, 1796
Bsp1720I	GCTNAGC	1 cut(s)	1703
Bsp68I	TCGCGA	1 cut(s)	1380
BspACI	CCGC	4 cut(s)	225, 227, 708, 791
BspANI	GGCC	1 cut(s)	860
BspCNI	CTCAG	3 cut(s)	1559, 1727, 1835
BspFNI	CGCG	2 cut(s)	227, 1380
BspLI	GGNNCC	3 cut(s)	145, 241, 528
BspMAI	CTGCAG	1 cut(s)	250
BspPI	GGATC	2 cut(s)	1655, 1804
BspTNI	GGTCTC	1 cut(s)	1666
BsrDI	GCAATG	2 cut(s)	986, 1536
BsrFI	RCCGGY	1 cut(s)	99
BsrGI	TGTACA	2 cut(s)	603, 1563
BsrI	ACTGG	6 cut(s)	151, 409, 700, 726, 1027, 1191
BssAI	RCCGGY	1 cut(s)	99
BssECI	CCNNGG	4 cut(s)	225, 277, 354, 1633
BssMI	GATC	6 cut(s)	283, 1381, 1465, 1642, 1660, 1796
BssT1I	CCWWGG	1 cut(s)	354
Bst2UI	CCWGG	2 cut(s)	684, 825
Bst4CI	ACNGT	7 cut(s)	263, 322, 345, 979, 1542, 1568, 1634
Bst6I	CTCTTC	3 cut(s)	181, 813, 1085
BstAUI	TGTACA	2 cut(s)	603, 1563
BstBAI	YACGTR	1 cut(s)	200
BstC8I	GCNNGC	2 cut(s)	1393, 1743
BstDEI	CTNAG	7 cut(s)	65, 911, 1546, 1585, 1703, 1714, 1822
BstDSI	CCRYGG	3 cut(s)	225, 277, 1633
BstF5I	GGATG	2 cut(s)	185, 842
BstFNI	CGCG	2 cut(s)	227, 1380
BstHHI	GCGC	2 cut(s)	399, 676
BstKTI	GATC	6 cut(s)	286, 1384, 1468, 1645, 1663, 1799
BstMAI	GTCTC	2 cut(s)	1666, 1831
BstMBI	GATC	6 cut(s)	283, 1381, 1465, 1642, 1660, 1796
BstMWI	GCNNNNNNNGC	4 cut(s)	66, 396, 773, 1738
BstNI	CCWGG	2 cut(s)	684, 825
BstNSI	RCATGY	4 cut(s)	394, 657, 1516, 1780
BstSCI	CCNGG	3 cut(s)	682, 823, 1109
BstSFI	CTRYAG	2 cut(s)	246, 321
BstSLI	GKGCMC	1 cut(s)	623
BstUI	CGCG	2 cut(s)	227, 1380
BstV1I	GCAGC	6 cut(s)	505, 590, 760, 887, 1028, 1830
BstV2I	GAAGAC	1 cut(s)	650
BstX2I	RGATCY	3 cut(s)	283, 1642, 1660
BstYI	RGATCY	3 cut(s)	283, 1642, 1660
BsuRI	GGCC	1 cut(s)	860
BtgI	CCRYGG	3 cut(s)	225, 277, 1633
BtgZI	GCGATG	1 cut(s)	1361
BtsCI	GGATG	2 cut(s)	185, 842
BtsI	GCAGTG	2 cut(s)	243, 623
BtsIMutI	CAGTG	3 cut(s)	243, 471, 623
BtuMI	TCGCGA	1 cut(s)	1380
Cac8I	GCNNGC	2 cut(s)	1393, 1743
CfoI	GCGC	2 cut(s)	399, 676
Cfr10I	RCCGGY	1 cut(s)	99
Cfr13I	GGNCC	1 cut(s)	34
Cfr42I	CCGCGG	1 cut(s)	228
Csp6I	GTAC	5 cut(s)	346, 379, 604, 693, 1564
CspAI	ACCGGT	1 cut(s)	99
CspCI	CAANNNNNGTGG	2 cut(s)	783, 818
CviAII	CATG	8 cut(s)	391, 451, 654, 1513, 1535, 1699, 1777, 1830
CviQI	GTAC	5 cut(s)	346, 379, 604, 693, 1564
DdeI	CTNAG	7 cut(s)	65, 911, 1546, 1585, 1703, 1714, 1822
DpnI	GATC	6 cut(s)	285, 1383, 1467, 1644, 1662, 1798
DpnII	GATC	6 cut(s)	283, 1381, 1465, 1642, 1660, 1796
DraI	TTTAAA	1 cut(s)	1132
EaeI	YGGCCR	1 cut(s)	858
Eam1104I	CTCTTC	3 cut(s)	181, 813, 1085
EarI	CTCTTC	3 cut(s)	181, 813, 1085
Eco130I	CCWWGG	1 cut(s)	354
Eco31I	GGTCTC	1 cut(s)	1666
Eco47I	GGWCC	1 cut(s)	34
Eco57I	CTGAAG	3 cut(s)	789, 1145, 1221
Eco72I	CACGTG	1 cut(s)	200
Eco88I	CYCGRG	2 cut(s)	441, 1359
EcoRII	CCWGG	2 cut(s)	682, 823
EcoT14I	CCWWGG	1 cut(s)	354
EcoT22I	ATGCAT	1 cut(s)	1536
ErhI	CCWWGG	1 cut(s)	354
FaeI	CATG	8 cut(s)	394, 454, 657, 1516, 1538, 1702, 1780, 1833
FaqI	GGGAC	1 cut(s)	1501
FatI	CATG	8 cut(s)	390, 450, 653, 1512, 1534, 1698, 1776, 1829
FauI	CCCGC	1 cut(s)	220
FauNDI	CATATG	1 cut(s)	1654
FbaI	TGATCA	1 cut(s)	1465
FblI	GTMKAC	1 cut(s)	17
Fnu4HI	GCNGC	6 cut(s)	494, 579, 774, 901, 1017, 1819
FokI	GGATG	2 cut(s)	172, 829
Fsp4HI	GCNGC	6 cut(s)	494, 579, 774, 901, 1017, 1819
FspBI	CTAG	4 cut(s)	1101, 1329, 1614, 1815
FspI	TGCGCA	1 cut(s)	675
GlaI	GCGC	2 cut(s)	398, 675
GluI	GCNGC	6 cut(s)	494, 579, 774, 901, 1017, 1819
GsuI	CTGGAG	1 cut(s)	807
HaeIII	GGCC	1 cut(s)	860
HapII	CCGG	4 cut(s)	100, 530, 549, 1110
HhaI	GCGC	2 cut(s)	399, 676
Hin1II	CATG	8 cut(s)	394, 454, 657, 1516, 1538, 1702, 1780, 1833
Hin6I	GCGC	2 cut(s)	397, 674
HinP1I	GCGC	2 cut(s)	397, 674
HindIII	AAGCTT	1 cut(s)	1157
HinfI	GANTC	5 cut(s)	805, 983, 1268, 1336, 1355
HpaII	CCGG	4 cut(s)	100, 530, 549, 1110
HphI	GGTGA	2 cut(s)	280, 780
Hpy166II	GTNNAC	5 cut(s)	18, 30, 259, 621, 1564
Hpy188I	TCNGA	7 cut(s)	1201, 1273, 1435, 1499, 1549, 1558, 1630
Hpy188III	TCNNGA	4 cut(s)	1101, 1352, 1379, 1794
Hpy8I	GTNNAC	5 cut(s)	18, 30, 259, 621, 1564
Hpy99I	CGWCG	1 cut(s)	386
HpyAV	CCTTC	4 cut(s)	792, 1048, 1196, 1482
HpyCH4III	ACNGT	7 cut(s)	263, 322, 345, 979, 1542, 1568, 1634
HpyCH4IV	ACGT	2 cut(s)	199, 932
HpyF10VI	GCNNNNNNNGC	4 cut(s)	66, 396, 773, 1738
HpyF3I	CTNAG	7 cut(s)	65, 911, 1546, 1585, 1703, 1714, 1822
HpySE526I	ACGT	2 cut(s)	199, 932
Hsp92II	CATG	8 cut(s)	394, 454, 657, 1516, 1538, 1702, 1780, 1833
HspAI	GCGC	2 cut(s)	397, 674
Ksp22I	TGATCA	1 cut(s)	1465
KspI	CCGCGG	1 cut(s)	228
Kzo9I	GATC	6 cut(s)	283, 1381, 1465, 1642, 1660, 1796
LmnI	GCTCC	6 cut(s)	149, 245, 442, 532, 665, 1112
Lsp1109I	GCAGC	6 cut(s)	505, 590, 760, 887, 1028, 1830
LweI	GCATC	1 cut(s)	928
MaeI	CTAG	4 cut(s)	1101, 1329, 1614, 1815
MaeII	ACGT	2 cut(s)	199, 932
MaeIII	GTNAC	6 cut(s)	313, 649, 1508, 1594, 1709, 1717
MalI	GATC	6 cut(s)	285, 1383, 1467, 1644, 1662, 1798
MboI	GATC	6 cut(s)	283, 1381, 1465, 1642, 1660, 1796
MboII	GAAGA	7 cut(s)	168, 650, 800, 927, 1102, 1652, 1670
MfeI	CAATTG	2 cut(s)	873, 1008
MflI	RGATCY	3 cut(s)	283, 1642, 1660
MhlI	GDGCHC	1 cut(s)	623
MlsI	TGGCCA	1 cut(s)	860
MluCI	AATT	8 cut(s)	127, 873, 969, 1008, 1171, 1229, 1851, 1859
MluNI	TGGCCA	1 cut(s)	860
MlyI	GAGTC	3 cut(s)	799, 992, 1262
MmeI	TCCRAC	4 cut(s)	213, 364, 1269, 1477
Mox20I	TGGCCA	1 cut(s)	860
Mph1103I	ATGCAT	1 cut(s)	1536
MscI	TGGCCA	1 cut(s)	860
MseI	TTAA	6 cut(s)	1038, 1131, 1365, 1580, 1649, 1839
Msp20I	TGGCCA	1 cut(s)	860
MspA1I	CMGCKG	3 cut(s)	227, 496, 767
MspI	CCGG	4 cut(s)	100, 530, 549, 1110
MspR9I	CCNGG	3 cut(s)	684, 825, 1111
MunI	CAATTG	2 cut(s)	873, 1008
MvaI	CCWGG	2 cut(s)	684, 825
MvnI	CGCG	2 cut(s)	227, 1380
MwoI	GCNNNNNNNGC	4 cut(s)	66, 396, 773, 1738
NciI	CCSGG	1 cut(s)	1111
NdeI	CATATG	1 cut(s)	1654
NdeII	GATC	6 cut(s)	283, 1381, 1465, 1642, 1660, 1796
NlaIII	CATG	8 cut(s)	394, 454, 657, 1516, 1538, 1702, 1780, 1833
NlaIV	GGNNCC	3 cut(s)	145, 241, 528
NruI	TCGCGA	1 cut(s)	1380
NsbI	TGCGCA	1 cut(s)	675
NsiI	ATGCAT	1 cut(s)	1536
NspI	RCATGY	4 cut(s)	394, 657, 1516, 1780
PaeR7I	CTCGAG	1 cut(s)	441
PciI	ACATGT	2 cut(s)	653, 1512
PfeI	GAWTC	2 cut(s)	1336, 1355
PfoI	TCCNGGA	1 cut(s)	823
PinAI	ACCGGT	1 cut(s)	99
PkrI	GCNGC	6 cut(s)	495, 580, 775, 902, 1018, 1820
PleI	GAGTC	3 cut(s)	799, 991, 1262
PmaCI	CACGTG	1 cut(s)	200
PmlI	CACGTG	1 cut(s)	200
PpsI	GAGTC	3 cut(s)	799, 991, 1262
Ppu21I	YACGTR	1 cut(s)	200
PscI	ACATGT	2 cut(s)	653, 1512
Psp6I	CCWGG	2 cut(s)	682, 823
PspCI	CACGTG	1 cut(s)	200
PspGI	CCWGG	2 cut(s)	682, 823
PspN4I	GGNNCC	3 cut(s)	145, 241, 528
PspPI	GGNCC	1 cut(s)	34
PspXI	VCTCGAGB	1 cut(s)	441
PstI	CTGCAG	1 cut(s)	250
PsuI	RGATCY	3 cut(s)	283, 1642, 1660
PvuII	CAGCTG	2 cut(s)	496, 767
RruI	TCGCGA	1 cut(s)	1380
RsaI	GTAC	5 cut(s)	347, 380, 605, 694, 1565
RsaNI	GTAC	5 cut(s)	346, 379, 604, 693, 1564
SacII	CCGCGG	1 cut(s)	228
SaqAI	TTAA	6 cut(s)	1038, 1131, 1365, 1580, 1649, 1839
SatI	GCNGC	6 cut(s)	494, 579, 774, 901, 1017, 1819
Sau3AI	GATC	6 cut(s)	283, 1381, 1465, 1642, 1660, 1796
Sau96I	GGNCC	1 cut(s)	34
ScaI	AGTACT	1 cut(s)	347
SchI	GAGTC	3 cut(s)	799, 992, 1262
ScrFI	CCNGG	3 cut(s)	684, 825, 1111
SduI	GDGCHC	1 cut(s)	623
SfaNI	GCATC	1 cut(s)	928
SfcI	CTRYAG	2 cut(s)	246, 321
Sfr274I	CTCGAG	1 cut(s)	441
Sfr303I	CCGCGG	1 cut(s)	228
SgrBI	CCGCGG	1 cut(s)	228
SinI	GGWCC	1 cut(s)	34
SlaI	CTCGAG	1 cut(s)	441
SmlI	CTYRAG	3 cut(s)	84, 441, 1473
SmoI	CTYRAG	3 cut(s)	84, 441, 1473
SpeI	ACTAGT	1 cut(s)	1613
Sse9I	AATT	8 cut(s)	127, 873, 969, 1008, 1171, 1229, 1851, 1859
SsiI	CCGC	4 cut(s)	225, 227, 708, 791
SspI	AATATT	1 cut(s)	1455
SspMI	CTAG	4 cut(s)	1101, 1329, 1614, 1815
StyD4I	CCNGG	3 cut(s)	682, 823, 1109
StyI	CCWWGG	1 cut(s)	354
TaaI	ACNGT	7 cut(s)	263, 322, 345, 979, 1542, 1568, 1634
TaiI	ACGT	2 cut(s)	202, 935
TaqI	TCGA	4 cut(s)	442, 661, 739, 1870
TasI	AATT	8 cut(s)	127, 873, 969, 1008, 1171, 1229, 1851, 1859
TatI	WGTACW	4 cut(s)	345, 603, 692, 1563
TfiI	GAWTC	2 cut(s)	1336, 1355
Tru1I	TTAA	6 cut(s)	1038, 1131, 1365, 1580, 1649, 1839
Tru9I	TTAA	6 cut(s)	1038, 1131, 1365, 1580, 1649, 1839
TscAI	CASTG	3 cut(s)	250, 478, 623
TseI	GCWGC	6 cut(s)	493, 578, 773, 900, 1016, 1818
TspDTI	ATGAA	7 cut(s)	555, 759, 774, 981, 1242, 1433, 1671
TspGWI	ACGGA	1 cut(s)	47
TspRI	CASTG	3 cut(s)	250, 478, 623
VneI	GTGCAC	1 cut(s)	619
VpaK11BI	GGWCC	1 cut(s)	34
XapI	RAATTY	3 cut(s)	969, 1171, 1229
XbaI	TCTAGA	1 cut(s)	1100
XceI	RCATGY	4 cut(s)	394, 657, 1516, 1780
XhoI	CTCGAG	1 cut(s)	441
XmiI	GTMKAC	1 cut(s)	17
XspI	CTAG	4 cut(s)	1101, 1329, 1614, 1815
ZrmI	AGTACT	1 cut(s)	347
Zsp2I	ATGCAT	1 cut(s)	1536

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.