Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0004964.1

Orthogroup ID

OG0000283

Physical Location & Seq

Genomic Coordinates Reverse (-)

54989 .. 58016

Gene Structure 3028 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0004964.1_g000007.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1971 bp

atggcagaagtgatccttctcttcctttcagtggtcaccctggtaagctttccgactacaaaagccgactacctctaccatagctgcccaaacaccaccgtcttcaccccaaactccaccttccagtccaacctcaaccacctcctctcgactctctcctccaacgccacacgcgacaccggcttctacaacgccacctccggccgtacccctaacgacaccgtctacggcctcttcctctgccgcggtgacgtcaccaccaccacttgcaagtcctgcgtgaccaccgcaacctccgaggtcgtgcagcgctgccctgtcgagaaagaggttgtgatatggtacgacgactgcttgctccgctactccaacaagtccttcttctccgtagccactgagtcgccgggggtgttcatgtggaacacgggtaacatcagcagcgaaccgaaccggttcaaccaggttttggcggcgagcatgaaggaggtggccacggcggcttcgaacggcggcgacaagttcgcgacgagagaggcggatttcacggaattgattagtttgtacagcttagggcagtgcacgcaggacttgtctagatttgattgcaatcggtgtcttctgggagccatatcgcagttgccgggttgctgcggcgggaagcaagggggacgagttctgtatccgagttgtaatgttaggtatgaagtttatcccttttataactcgacgtcagcaccggcaccggcgccggcgccaggggctcaacctctttctccgccgaaggggaagagcaaaatctcctggaaaaagattgtggccattgccgttccaattgctgcctctttggtgctttttgtgatcggctcctgcctcgttactaagagggcaagaaagaagtacaatgcagtaccagaaacaagtggtgcgaatgacatttctagtgtagagtctttgcaatttgattttggtaccattgaagctgctacaaacaatttctctgacgataacaagttaggcgaaggtggatttggtcaagtctacaagggtttgctttctgatggtcaagaaatagctgtcaagaggctatcaaggaactctggccaaggtgcacaagaatttaagaatgagatggtactggtagccaagcttcaacaccgaaatctggtcaggctattgggattttgcttggaaggggaagaaaagatgcttgtttatgaatacgtccccaacaaaagcctcgactatattctatttgaccctgagaaacaaggacaactggattggtcgagacgttacaaaattattgcggggattgcccgaggaattatgtatctacatgaagactcccggctaagaattatacatcgcgatcttaaagccagcaatatattgttagatggggaaatgcatccaaaaatatctgattttggcatggcgaggatattcggcgttgatcaaactcaagcaaacacaaatagaattgttggaacatatggttacatgtctccagaatatgcaatgcatggacaattttctatcaagtccgatatctatagttttggtgtcttagttctagaaattatcagtggcaagaagaatagttacttcttccaaacagatgcagctgaggacctcgtgagccatgcttggaaactatggagagatggaacacctttggaattgttggatccgtgtctgagagattcttattctagaaatgaagtcgtcagatgtatccacattggcttgctttgtgttcaggaagacccggctgacagacctacaatgcaatcactagttctcatgctcaacagctactctgttactctaccattacctcaaaagccagcatttttccataggactggatcggagttcatgccgaagataccgctggattctgatcagtctatcagcaagtcaagtccgtcggtttatgatggatctatcactgaagtatatcctcgataa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009617 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0042742 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050896 GO:0051704 GO:0051707 GO:0071704 GO:0071944 GO:0098542 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr Stress-antifung

Protein Analysis

656

Amino Acids

72.6

Weight (kDa)

6.8

Isoelectric Point (pI)

44.56

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000283)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G45860 AT4G05200 AT4G05200 AT4G11521 AT4G11530 AT4G23130 AT4G23130 AT4G23130 AT4G23140 AT4G23140 AT4G23150 AT4G23160 AT4G23170 AT4G23180 AT4G23180 AT4G23180 AT4G23230 AT4G23270 AT4G23270 AT4G23270 AT4G23280 AT4G23280 AT4G23280 AT4G23310 AT4G23310
fragaria_vesca	FvH4_3g02772 FvH4_3g02772 FvH4_3g02773 FvH4_3g02773 FvH4_3g02774 FvH4_3g02800 FvH4_3g02820 FvH4_3g02820 FvH4_3g02830
malus_domestica	MD00G1101900.v1.1 MD00G1102100.v1.1 MD00G1102200.v1.1 MD01G1098200.v1.1 MD05G1340000.v1.1 MD05G1340300.v1.1 MD07G1014100.v1.1 MD07G1014300.v1.1 MD07G1014400.v1.1 MD07G1014700.v1.1 MD10G1312900.v1.1 MD11G1022600.v1.1 MD11G1291500.v1.1 MD14G1207100.v1.1 MD16G1096600.v1.1
prunus_persica	Prupe.4G027300_v2.0.a1 Prupe.4G027400_v2.0.a1 Prupe.4G027700_v2.0.a1 Prupe.4G027800_v2.0.a1
pyrus_communis	pycom05g30960 pycom10g00940 pycom10g00950 pycom10g26430 pycom10g26450 pycom10g26460 pycom10g26470 pycom10g26480 pycom10g26490 pycom10g26500 pycom10g26510 pycom10g26570 pycom11g01820 pycom11g04000 pycom14g17130 pycom14g17140 pycom15g28820
rosa_chinensis	RchiOBHm_Chr4g0408141 RchiOBHm_Chr5g0004211 RchiOBHm_Chr5g0004231 RchiOBHm_Chr5g0004241 RchiOBHm_Chr5g0004261
rosa_laevigata	RLG00000008668 RLG00000008672 RLG00000031212 RLG00000031217
rosa_multiflora	Rmu_co8162658.1_g000001 Rmu_co8336297.1_g000001 Rmu_sc0002073.1_g000001 Rmu_sc0004964.1_g000002 Rmu_sc0004964.1_g000003 Rmu_sc0004964.1_g000007 Rmu_sc0006006.1_g000007 Rmu_sc0007868.1_g000015 Rmu_sc0007868.1_g000016 Rmu_sc0007868.1_g000017 Rmu_sc0007868.1_g000021 Rmu_sc0007868.1_g000023 Rmu_sc0019654.1_g000002 Rmu_sc0038540.1_g000001
rosa_roxburghii	Rroxscaffold_1G00071450 Rroxscaffold_1G00071460 Rroxscaffold_1G00071470 Rroxscaffold_1G00071560 Rroxscaffold_1G00071720 Rroxscaffold_1G00071770 Rroxscaffold_5G00352640
rosa_rugosa	Rorug04G0083700 Rorug04G0410700 Rorug04G0410800 Rorug04G0410900
rosa_samantha	Rh4BG145400 Rh4CG154900 Rh4DG141900 Rh5BG037500 Rh5BG037600 Rh5BG037700 Rh5CG041000 Rh5CG041100 Rh5CG041200 Rh5CG041300 Rh5CG041400 Rh5DG037100
rosa_wichuraiana	Rw4G012130 Rw5G003450 Rw5G003460 Rw5G003470 Rw5G003480 Rw5G003640 Rw5G003660 Rw5G003670 Rw5G003680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	720
AatII	GACGTC	2 cut(s)	255, 731
Acc65I	GGTACC	1 cut(s)	968
AccB1I	GGYRCC	4 cut(s)	739, 745, 751, 968
AccB7I	CCANNNNNTGG	1 cut(s)	466
AccI	GTMKAC	2 cut(s)	225, 1038
AccII	CGCG	4 cut(s)	174, 246, 524, 1368
AclWI	GGATC	5 cut(s)	7, 1682, 1695, 1876, 1951
AcoI	YGGCCR	4 cut(s)	202, 489, 816, 1099
AcsI	RAATTY	1 cut(s)	1115
AcyI	GRCGYC	4 cut(s)	252, 728, 746, 752
AfaI	GTAC	7 cut(s)	208, 344, 563, 899, 909, 970, 1134
AfeI	AGCGCT	1 cut(s)	311
AfiI	CCNNNNNNNGG	5 cut(s)	31, 466, 755, 782, 1162
AflIII	ACRYGT	1 cut(s)	1500
AgeI	ACCGGT	1 cut(s)	450
AgsI	TTSAA	3 cut(s)	457, 977, 1151
AhlI	ACTAGT	1 cut(s)	1795
AjnI	CCWGG	4 cut(s)	39, 459, 754, 800
AjuI	GAANNNNNNNTTGG	4 cut(s)	362, 394, 1011, 1043
AluBI	AGCT	8 cut(s)	48, 84, 567, 980, 1073, 1147, 1625, 1815
AluI	AGCT	8 cut(s)	48, 84, 567, 980, 1073, 1147, 1625, 1815
Alw21I	GWGCWC	2 cut(s)	581, 1111
Alw26I	GTCTC	2 cut(s)	1282, 1509
Alw44I	GTGCAC	2 cut(s)	577, 1107
AlwI	GGATC	5 cut(s)	7, 1682, 1695, 1876, 1951
Ama87I	CYCGRG	1 cut(s)	1317
Aor51HI	AGCGCT	1 cut(s)	311
AoxI	GGCC	5 cut(s)	202, 229, 489, 816, 1099
ApaLI	GTGCAC	2 cut(s)	577, 1107
ApeKI	GCWGC	8 cut(s)	84, 307, 312, 438, 648, 836, 980, 1622
ApoI	RAATTY	1 cut(s)	1115
AsiGI	ACCGGT	1 cut(s)	450
Asp700I	GAANNNNTTC	1 cut(s)	452
Asp718I	GGTACC	1 cut(s)	968
AspLEI	GCGC	3 cut(s)	312, 748, 754
AspS9I	GGNCC	1 cut(s)	1630
AsuC2I	CCSGG	4 cut(s)	405, 642, 1348, 1769
AsuHPI	GGTGA	4 cut(s)	28, 97, 247, 260
AsuII	TTCGAA	1 cut(s)	503
AvaI	CYCGRG	1 cut(s)	1317
AvaII	GGWCC	1 cut(s)	1630
BaeGI	GKGCMC	2 cut(s)	581, 1111
BalI	TGGCCA	3 cut(s)	491, 818, 1101
BamHI	GGATCC	1 cut(s)	1687
BanI	GGYRCC	4 cut(s)	739, 745, 751, 968
BanII	GRGCYC	1 cut(s)	763
BarI	GAAGNNNNNNTAC	4 cut(s)	1131, 1163, 1586, 1618
BauI	CACGAG	1 cut(s)	1634
BbsI	GAAGAC	4 cut(s)	94, 608, 1347, 1770
Bbv12I	GWGCWC	2 cut(s)	581, 1111
BbvCI	CCTCAGC	1 cut(s)	1626
BbvI	GCAGC	8 cut(s)	71, 299, 319, 450, 635, 823, 967, 1634
BccI	CCATC	5 cut(s)	1052, 1123, 1391, 1658, 1934
BceAI	ACGGC	5 cut(s)	189, 244, 510, 523, 809
BciT130I	CCWGG	4 cut(s)	41, 461, 756, 802
BciVI	GTATCC	2 cut(s)	690, 1745
BclI	TGATCA	2 cut(s)	1453, 1903
BcnI	CCSGG	4 cut(s)	405, 642, 1348, 1769
BcoDI	GTCTC	2 cut(s)	1282, 1509
BcuI	ACTAGT	1 cut(s)	1795
BfaI	CTAG	5 cut(s)	594, 939, 1574, 1713, 1796
BfmI	CTRYAG	1 cut(s)	1552
BfoI	RGCGCY	3 cut(s)	313, 749, 755
BfuI	GTATCC	2 cut(s)	690, 1745
BglI	GCCNNNNNGGC	1 cut(s)	497
Bme1390I	CCNGG	8 cut(s)	41, 405, 461, 642, 756, 802, 1348, 1769
Bme18I	GGWCC	1 cut(s)	1630
BmeT110I	CYCGRG	1 cut(s)	1317
BmgT120I	GGNCC	1 cut(s)	1630
BmiI	GGNNCC	7 cut(s)	625, 741, 747, 753, 865, 970, 1689
BmrFI	CCNGG	8 cut(s)	41, 405, 461, 642, 756, 802, 1348, 1769
BmsI	GCATC	3 cut(s)	1194, 1417, 1609
BpiI	GAAGAC	4 cut(s)	94, 608, 1347, 1770
BpmI	CTGGAG	1 cut(s)	1491
Bpu10I	CCTNAGC	2 cut(s)	568, 1626
Bpu14I	TTCGAA	1 cut(s)	503
BpuEI	CTTGAG	1 cut(s)	1446
BpuMI	CCSGG	4 cut(s)	405, 642, 1348, 1769
BsaBI	GATNNNNATC	2 cut(s)	606, 1902
BsaHI	GRCGYC	4 cut(s)	252, 728, 746, 752
BsaJI	CCNNGG	8 cut(s)	39, 244, 297, 404, 492, 755, 1102, 1318
BsaWI	WCCGGW	1 cut(s)	450
BsaXI	ACNNNNNCTCC	2 cut(s)	182, 212
Bsc4I	CCNNNNNNNGG	5 cut(s)	31, 466, 755, 782, 1162
Bse118I	RCCGGY	5 cut(s)	179, 450, 736, 742, 748
Bse1I	ACTGG	4 cut(s)	124, 1140, 1281, 1870
Bse3DI	GCAATG	2 cut(s)	819, 1524
Bse8I	GATNNNNATC	2 cut(s)	606, 1902
BseBI	CCWGG	4 cut(s)	41, 461, 756, 802
BseDI	CCNNGG	8 cut(s)	39, 244, 297, 404, 492, 755, 1102, 1318
BseGI	GGATG	1 cut(s)	1408
BseJI	GATNNNNATC	2 cut(s)	606, 1902
BseLI	CCNNNNNNNGG	5 cut(s)	31, 466, 755, 782, 1162
BseMI	GCAATG	2 cut(s)	819, 1524
BseMII	CTCAG	4 cut(s)	387, 1251, 1617, 1688
BseNI	ACTGG	4 cut(s)	124, 1140, 1281, 1870
BseRI	GAGGAG	2 cut(s)	134, 148
BseSI	GKGCMC	2 cut(s)	581, 1111
BseX3I	CGGCCG	1 cut(s)	202
BseXI	GCAGC	8 cut(s)	71, 299, 319, 450, 635, 823, 967, 1634
BsgI	GTGCAG	1 cut(s)	326
Bsh1236I	CGCG	4 cut(s)	174, 246, 524, 1368
Bsh1285I	CGRYCG	1 cut(s)	205
BshFI	GGCC	5 cut(s)	204, 231, 491, 818, 1101
BshNI	GGYRCC	4 cut(s)	739, 745, 751, 968
BshTI	ACCGGT	1 cut(s)	450
BsiEI	CGRYCG	1 cut(s)	205
BsiHKAI	GWGCWC	2 cut(s)	581, 1111
BsiHKCI	CYCGRG	1 cut(s)	1317
BslFI	GGGAC	2 cut(s)	681, 1208
BslI	CCNNNNNNNGG	5 cut(s)	31, 466, 755, 782, 1162
BsmAI	GTCTC	2 cut(s)	1282, 1509
BsmBI	CGTCTC	1 cut(s)	1282
BsmFI	GGGAC	2 cut(s)	681, 1208
BsnI	GGCC	5 cut(s)	204, 231, 491, 818, 1101
BsoBI	CYCGRG	1 cut(s)	1317
Bsp119I	TTCGAA	1 cut(s)	503
Bsp1286I	GDGCHC	3 cut(s)	581, 763, 1111
Bsp1407I	TGTACA	1 cut(s)	561
Bsp143I	GATC	8 cut(s)	12, 858, 1369, 1453, 1687, 1868, 1903, 1943
Bsp68I	TCGCGA	2 cut(s)	524, 1368
BspANI	GGCC	5 cut(s)	204, 231, 491, 818, 1101
BspCNI	CTCAG	4 cut(s)	388, 1252, 1618, 1689
BspFNI	CGCG	4 cut(s)	174, 246, 524, 1368
BspLI	GGNNCC	7 cut(s)	625, 741, 747, 753, 865, 970, 1689
BspPI	GGATC	5 cut(s)	7, 1682, 1695, 1876, 1951
BspQI	GCTCTTC	1 cut(s)	782
BspT104I	TTCGAA	1 cut(s)	503
BspT107I	GGYRCC	4 cut(s)	739, 745, 751, 968
BsrDI	GCAATG	2 cut(s)	819, 1524
BsrFI	RCCGGY	5 cut(s)	179, 450, 736, 742, 748
BsrGI	TGTACA	1 cut(s)	561
BsrI	ACTGG	4 cut(s)	124, 1140, 1281, 1870
BssAI	RCCGGY	5 cut(s)	179, 450, 736, 742, 748
BssECI	CCNNGG	8 cut(s)	39, 244, 297, 404, 492, 755, 1102, 1318
BssMI	GATC	8 cut(s)	12, 858, 1369, 1453, 1687, 1868, 1903, 1943
BssNI	GRCGYC	4 cut(s)	252, 728, 746, 752
BssSI	CACGAG	1 cut(s)	1634
BssT1I	CCWWGG	1 cut(s)	1102
Bst2BI	CACGAG	1 cut(s)	1634
Bst2UI	CCWGG	4 cut(s)	41, 461, 756, 802
Bst4CI	ACNGT	2 cut(s)	100, 223
Bst6I	CTCTTC	3 cut(s)	26, 239, 782
BstACI	GRCGYC	4 cut(s)	252, 728, 746, 752
BstAPI	GCANNNNNTGC	1 cut(s)	276
BstAUI	TGTACA	1 cut(s)	561
BstBI	TTCGAA	1 cut(s)	503
BstC8I	GCNNGC	7 cut(s)	356, 475, 581, 750, 1381, 1748, 1848
BstDEI	CTNAG	8 cut(s)	396, 568, 879, 1260, 1352, 1567, 1626, 1697
BstDSI	CCRYGG	2 cut(s)	244, 492
BstEII	GGTNACC	1 cut(s)	34
BstF5I	GGATG	1 cut(s)	1408
BstFNI	CGCG	4 cut(s)	174, 246, 524, 1368
BstH2I	RGCGCY	3 cut(s)	313, 749, 755
BstHHI	GCGC	3 cut(s)	312, 748, 754
BstKTI	GATC	8 cut(s)	15, 861, 1372, 1456, 1690, 1871, 1906, 1946
BstMAI	GTCTC	2 cut(s)	1282, 1509
BstMBI	GATC	8 cut(s)	12, 858, 1369, 1453, 1687, 1868, 1903, 1943
BstMCI	CGRYCG	1 cut(s)	205
BstMWI	GCNNNNNNNGC	7 cut(s)	180, 276, 360, 497, 580, 758, 1313
BstNI	CCWGG	4 cut(s)	41, 461, 756, 802
BstNSI	RCATGY	1 cut(s)	1504
BstPI	GGTNACC	1 cut(s)	34
BstSCI	CCNGG	8 cut(s)	39, 403, 459, 640, 754, 800, 1346, 1767
BstSFI	CTRYAG	1 cut(s)	1552
BstSLI	GKGCMC	2 cut(s)	581, 1111
BstUI	CGCG	4 cut(s)	174, 246, 524, 1368
BstV1I	GCAGC	8 cut(s)	71, 299, 319, 450, 635, 823, 967, 1634
BstV2I	GAAGAC	4 cut(s)	94, 608, 1347, 1770
BstX2I	RGATCY	2 cut(s)	1687, 1943
BstXI	CCANNNNNNTGG	1 cut(s)	1865
BstYI	RGATCY	2 cut(s)	1687, 1943
BstZI	CGGCCG	1 cut(s)	202
BsuI	GTATCC	2 cut(s)	690, 1745
BsuRI	GGCC	5 cut(s)	204, 231, 491, 818, 1101
BtgI	CCRYGG	2 cut(s)	244, 492
BtgZI	GCGATG	1 cut(s)	1349
BtsCI	GGATG	1 cut(s)	1408
BtsI	GCAGTG	1 cut(s)	581
BtsIMutI	CAGTG	5 cut(s)	36, 393, 581, 1591, 1950
BtuMI	TCGCGA	2 cut(s)	524, 1368
Cac8I	GCNNGC	7 cut(s)	356, 475, 581, 750, 1381, 1748, 1848
CfoI	GCGC	3 cut(s)	312, 748, 754
Cfr10I	RCCGGY	5 cut(s)	179, 450, 736, 742, 748
Cfr13I	GGNCC	1 cut(s)	1630
Cfr42I	CCGCGG	1 cut(s)	247
CsiI	ACCWGGT	1 cut(s)	459
Csp6I	GTAC	7 cut(s)	207, 343, 562, 898, 908, 969, 1133
CspAI	ACCGGT	1 cut(s)	450
CviAII	CATG	9 cut(s)	415, 478, 1337, 1432, 1501, 1523, 1643, 1804, 1879
CviQI	GTAC	7 cut(s)	207, 343, 562, 898, 908, 969, 1133
DdeI	CTNAG	8 cut(s)	396, 568, 879, 1260, 1352, 1567, 1626, 1697
DinI	GGCGCC	2 cut(s)	747, 753
DpnI	GATC	8 cut(s)	14, 860, 1371, 1455, 1689, 1870, 1905, 1945
DpnII	GATC	8 cut(s)	12, 858, 1369, 1453, 1687, 1868, 1903, 1943
EaeI	YGGCCR	4 cut(s)	202, 489, 816, 1099
EagI	CGGCCG	1 cut(s)	202
Eam1104I	CTCTTC	3 cut(s)	26, 239, 782
EarI	CTCTTC	3 cut(s)	26, 239, 782
EciI	GGCGGA	2 cut(s)	551, 765
EclXI	CGGCCG	1 cut(s)	202
Eco130I	CCWWGG	1 cut(s)	1102
Eco24I	GRGCYC	1 cut(s)	763
Eco32I	GATATC	1 cut(s)	1549
Eco47I	GGWCC	1 cut(s)	1630
Eco47III	AGCGCT	1 cut(s)	311
Eco52I	CGGCCG	1 cut(s)	202
Eco88I	CYCGRG	1 cut(s)	1317
Eco91I	GGTNACC	1 cut(s)	34
EcoO109I	RGGNCCY	1 cut(s)	1630
EcoO65I	GGTNACC	1 cut(s)	34
EcoRII	CCWGG	4 cut(s)	39, 459, 754, 800
EcoRV	GATATC	1 cut(s)	1549
EcoT14I	CCWWGG	1 cut(s)	1102
EcoT22I	ATGCAT	2 cut(s)	1410, 1524
EcoT38I	GRGCYC	1 cut(s)	763
EgeI	GGCGCC	2 cut(s)	747, 753
EheI	GGCGCC	2 cut(s)	747, 753
ErhI	CCWWGG	1 cut(s)	1102
Esp3I	CGTCTC	1 cut(s)	1282
FaeI	CATG	9 cut(s)	418, 481, 1340, 1435, 1504, 1526, 1646, 1807, 1882
FalI	AAGNNNNNCTT	3 cut(s)	32, 365, 397
FaqI	GGGAC	2 cut(s)	681, 1208
FatI	CATG	9 cut(s)	414, 477, 1336, 1431, 1500, 1522, 1642, 1803, 1878
FauI	CCCGC	2 cut(s)	647, 1300
FauNDI	CATATG	1 cut(s)	1492
FbaI	TGATCA	2 cut(s)	1453, 1903
FblI	GTMKAC	2 cut(s)	225, 1038
FokI	GGATG	1 cut(s)	1395
FriOI	GRGCYC	1 cut(s)	763
FspBI	CTAG	5 cut(s)	594, 939, 1574, 1713, 1796
GlaI	GCGC	3 cut(s)	311, 747, 753
GsuI	CTGGAG	1 cut(s)	1491
HaeII	RGCGCY	3 cut(s)	313, 749, 755
HaeIII	GGCC	5 cut(s)	204, 231, 491, 818, 1101
HhaI	GCGC	3 cut(s)	312, 748, 754
Hin1I	GRCGYC	4 cut(s)	252, 728, 746, 752
Hin1II	CATG	9 cut(s)	418, 481, 1340, 1435, 1504, 1526, 1646, 1807, 1882
Hin6I	GCGC	3 cut(s)	310, 746, 752
HinP1I	GCGC	3 cut(s)	310, 746, 752
HindIII	AAGCTT	2 cut(s)	46, 1145
HinfI	GANTC	6 cut(s)	151, 398, 947, 1343, 1703, 1898
HphI	GGTGA	4 cut(s)	28, 97, 247, 260
Hpy166II	GTNNAC	4 cut(s)	226, 579, 1039, 1109
Hpy8I	GTNNAC	4 cut(s)	226, 579, 1039, 1109
Hpy99I	CGWCG	4 cut(s)	350, 529, 730, 1933
HpyAV	CCTTC	7 cut(s)	26, 130, 388, 475, 775, 1013, 1184
HpyCH4III	ACNGT	2 cut(s)	100, 223
HpyCH4IV	ACGT	4 cut(s)	252, 728, 1221, 1291
HpyF10VI	GCNNNNNNNGC	7 cut(s)	180, 276, 360, 497, 580, 758, 1313
HpyF3I	CTNAG	8 cut(s)	396, 568, 879, 1260, 1352, 1567, 1626, 1697
HpySE526I	ACGT	4 cut(s)	252, 728, 1221, 1291
Hsp92I	GRCGYC	4 cut(s)	252, 728, 746, 752
Hsp92II	CATG	9 cut(s)	418, 481, 1340, 1435, 1504, 1526, 1646, 1807, 1882
HspAI	GCGC	3 cut(s)	310, 746, 752
KasI	GGCGCC	2 cut(s)	745, 751
KpnI	GGTACC	1 cut(s)	972
KroI	GCCGGC	1 cut(s)	748
KroNI	GCCGGC	1 cut(s)	750
Ksp22I	TGATCA	2 cut(s)	1453, 1903
KspI	CCGCGG	1 cut(s)	247
Kzo9I	GATC	8 cut(s)	12, 858, 1369, 1453, 1687, 1868, 1903, 1943
LguI	GCTCTTC	1 cut(s)	782
LmnI	GCTCC	3 cut(s)	363, 623, 869
Lsp1109I	GCAGC	8 cut(s)	71, 299, 319, 450, 635, 823, 967, 1634
LweI	GCATC	3 cut(s)	1194, 1417, 1609
MabI	ACCWGGT	1 cut(s)	459
MaeI	CTAG	5 cut(s)	594, 939, 1574, 1713, 1796
MaeII	ACGT	4 cut(s)	252, 728, 1221, 1291
MalI	GATC	8 cut(s)	14, 860, 1371, 1455, 1689, 1870, 1905, 1945
MboI	GATC	8 cut(s)	12, 858, 1369, 1453, 1687, 1868, 1903, 1943
MfeI	CAATTG	1 cut(s)	831
MflI	RGATCY	2 cut(s)	1687, 1943
MhlI	GDGCHC	3 cut(s)	581, 763, 1111
MlsI	TGGCCA	3 cut(s)	491, 818, 1101
MluNI	TGGCCA	3 cut(s)	491, 818, 1101
Mly113I	GGCGCC	2 cut(s)	746, 752
MlyI	GAGTC	4 cut(s)	145, 407, 956, 1337
MmeI	TCCRAC	6 cut(s)	77, 153, 186, 393, 1465, 1665
Mox20I	TGGCCA	3 cut(s)	491, 818, 1101
Mph1103I	ATGCAT	2 cut(s)	1410, 1524
MreI	CGCCGGCG	1 cut(s)	748
MroNI	GCCGGC	1 cut(s)	748
MroXI	GAANNNNTTC	1 cut(s)	452
MscI	TGGCCA	3 cut(s)	491, 818, 1101
MseI	TTAA	2 cut(s)	1119, 1374
Msp20I	TGGCCA	3 cut(s)	491, 818, 1101
MspA1I	CMGCKG	3 cut(s)	246, 1625, 1894
MspR9I	CCNGG	8 cut(s)	41, 405, 461, 642, 756, 802, 1348, 1769
MunI	CAATTG	1 cut(s)	831
MvaI	CCWGG	4 cut(s)	41, 461, 756, 802
MvnI	CGCG	4 cut(s)	174, 246, 524, 1368
MwoI	GCNNNNNNNGC	7 cut(s)	180, 276, 360, 497, 580, 758, 1313
NaeI	GCCGGC	1 cut(s)	750
NarI	GGCGCC	2 cut(s)	746, 752
NciI	CCSGG	4 cut(s)	405, 642, 1348, 1769
NdeI	CATATG	1 cut(s)	1492
NdeII	GATC	8 cut(s)	12, 858, 1369, 1453, 1687, 1868, 1903, 1943
NgoMIV	GCCGGC	1 cut(s)	748
NlaIII	CATG	9 cut(s)	418, 481, 1340, 1435, 1504, 1526, 1646, 1807, 1882
NlaIV	GGNNCC	7 cut(s)	625, 741, 747, 753, 865, 970, 1689
NmuCI	GTSAC	4 cut(s)	34, 248, 253, 280
NruI	TCGCGA	2 cut(s)	524, 1368
NsiI	ATGCAT	2 cut(s)	1410, 1524
NspI	RCATGY	1 cut(s)	1504
NspV	TTCGAA	1 cut(s)	503
PciI	ACATGT	1 cut(s)	1500
PciSI	GCTCTTC	1 cut(s)	782
PcsI	WCGNNNNNNNCGW	2 cut(s)	171, 500
PdiI	GCCGGC	1 cut(s)	750
PdmI	GAANNNNTTC	1 cut(s)	452
PfeI	GAWTC	2 cut(s)	1703, 1898
PflFI	GACNNNGTC	1 cut(s)	221
PflMI	CCANNNNNTGG	1 cut(s)	466
PfoI	TCCNGGA	1 cut(s)	800
PinAI	ACCGGT	1 cut(s)	450
PleI	GAGTC	4 cut(s)	145, 406, 955, 1337
PluTI	GGCGCC	2 cut(s)	749, 755
PpsI	GAGTC	4 cut(s)	145, 406, 955, 1337
PpuMI	RGGWCCY	1 cut(s)	1630
PscI	ACATGT	1 cut(s)	1500
PsiI	TTATAA	1 cut(s)	720
Psp5II	RGGWCCY	1 cut(s)	1630
Psp6I	CCWGG	4 cut(s)	39, 459, 754, 800
PspEI	GGTNACC	1 cut(s)	34
PspGI	CCWGG	4 cut(s)	39, 459, 754, 800
PspN4I	GGNNCC	7 cut(s)	625, 741, 747, 753, 865, 970, 1689
PspPI	GGNCC	1 cut(s)	1630
PspPPI	RGGWCCY	1 cut(s)	1630
PsuI	RGATCY	2 cut(s)	1687, 1943
PsyI	GACNNNGTC	1 cut(s)	221
PvuII	CAGCTG	1 cut(s)	1625
RruI	TCGCGA	2 cut(s)	524, 1368
RsaI	GTAC	7 cut(s)	208, 344, 563, 899, 909, 970, 1134
RsaNI	GTAC	7 cut(s)	207, 343, 562, 898, 908, 969, 1133
SacII	CCGCGG	1 cut(s)	247
SapI	GCTCTTC	1 cut(s)	782
SaqAI	TTAA	2 cut(s)	1119, 1374
Sau3AI	GATC	8 cut(s)	12, 858, 1369, 1453, 1687, 1868, 1903, 1943
Sau96I	GGNCC	1 cut(s)	1630
SchI	GAGTC	4 cut(s)	145, 407, 956, 1337
ScrFI	CCNGG	8 cut(s)	41, 405, 461, 642, 756, 802, 1348, 1769
SduI	GDGCHC	3 cut(s)	581, 763, 1111
SexAI	ACCWGGT	1 cut(s)	459
SfaNI	GCATC	3 cut(s)	1194, 1417, 1609
SfcI	CTRYAG	1 cut(s)	1552
SfoI	GGCGCC	2 cut(s)	747, 753
Sfr303I	CCGCGG	1 cut(s)	247
SfuI	TTCGAA	1 cut(s)	503
SgrAI	CRCCGGYG	2 cut(s)	742, 748
SgrBI	CCGCGG	1 cut(s)	247
SinI	GGWCC	1 cut(s)	1630
SmlI	CTYRAG	1 cut(s)	1461
SmoI	CTYRAG	1 cut(s)	1461
SpeI	ACTAGT	1 cut(s)	1795
SspDI	GGCGCC	2 cut(s)	745, 751
SspMI	CTAG	5 cut(s)	594, 939, 1574, 1713, 1796
StyD4I	CCNGG	8 cut(s)	39, 403, 459, 640, 754, 800, 1346, 1767
StyI	CCWWGG	1 cut(s)	1102
TaaI	ACNGT	2 cut(s)	100, 223
TaiI	ACGT	4 cut(s)	255, 731, 1224, 1294
TaqI	TCGA	7 cut(s)	149, 321, 503, 725, 1239, 1286, 1966
TatI	WGTACW	2 cut(s)	561, 897
TauI	GCSGC	5 cut(s)	246, 473, 500, 513, 654
TfiI	GAWTC	2 cut(s)	1703, 1898
Tru1I	TTAA	2 cut(s)	1119, 1374
Tru9I	TTAA	2 cut(s)	1119, 1374
TscAI	CASTG	5 cut(s)	36, 400, 581, 1591, 1957
TseFI	GTSAC	4 cut(s)	34, 248, 253, 280
TseI	GCWGC	8 cut(s)	84, 307, 312, 438, 648, 836, 980, 1622
Tsp45I	GTSAC	4 cut(s)	34, 248, 253, 280
TspDTI	ATGAA	7 cut(s)	403, 494, 717, 1230, 1353, 1734, 1867
TspGWI	ACGGA	4 cut(s)	376, 560, 1680, 1917
TspRI	CASTG	5 cut(s)	36, 400, 581, 1591, 1957
Tth111I	GACNNNGTC	1 cut(s)	221
Van91I	CCANNNNNTGG	1 cut(s)	466
VneI	GTGCAC	2 cut(s)	577, 1107
VpaK11BI	GGWCC	1 cut(s)	1630
XapI	RAATTY	1 cut(s)	1115
XbaI	TCTAGA	3 cut(s)	593, 1573, 1712
XceI	RCATGY	1 cut(s)	1504
XmiI	GTMKAC	2 cut(s)	225, 1038
XmnI	GAANNNNTTC	1 cut(s)	452
XspI	CTAG	5 cut(s)	594, 939, 1574, 1713, 1796
ZraI	GACGTC	2 cut(s)	253, 729
Zsp2I	ATGCAT	2 cut(s)	1410, 1524

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.