Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4C

Orthogroup ID

OG0000283

Physical Location & Seq

Genomic Coordinates Reverse (-)

34161510 .. 34164952

Gene Structure 3443 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4CG154900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2010 bp

ATGCCTTCTAATCTGTTCATGGCCCTTGTGGTGCTCCCCATTCTTGGCTTCCTTAGCGTTAGGGTTGAAGCTCAAGCACCAACTTACCGGTATCATATCTGTTCAAACACAACCAGTTTCACTCCCAACAGCATCTACCAGTCTAATCTTAATCTTCTCCTCTCTTCTCTCACATCCAACGCCAAACGTGATATTGGATTCTACTACACCACAGCGGGCGTGCAAAACTCAACTTCAGAAGTAGTTTACGGTTCTTTCCTATGCCGTGGAGATCTCACCCCTGACTTGTGCCAAGAATGTATTACTACTATAGCCAAAGATGGTGTCCAAAAGTACTGCCCCTTGGAAAAAATTTCAATAATATGGTACGATGAGTGCATATTGCGCTACACAAATCAGTCTTTCTTGAACAGGTTGGACAAAGATCCTCAAATTTCCATGGTGGACATTTGGAATGTCACTGACCCTACCCGCTTTACACAGCTGCTAGCAGAAACAATCAATGGCTTGGTGGCTCTGGCTTCAAATGCACCATCTGGTGCTAAAAAGTATGCAACGAAAGAAGCACCTTTCACAGGGTTTCAGCAGTTGAACAGCCTTGTTCAGTGCACACCAGACATATCAAGCACAAGTTGTGATACATGTCTTCGAGAAGCTATTGCGCAACTTTCAGGTTGTTGTACTGGAAAGGAAAGTGCTAGAATTTTATCTCTTAGTTGTAATGTTCGATATGAAGTTTATCCATTTTATACAACTGAAGCAGTCACACCTTCACCCCTCCCACAACCTCCGACTCTTCCTCCCCCACATCCAGGAAAAGACCAAATCTCATCCTTAATCATAGTGGCCATTGTTGTTCCAATTTCCATAGTGCTTTTATTGGTAGGCTGCTGCTTTTTTCTACGAAGAAAGGCAAGAAAAAAGTGTAATGCTTTACAAGAACAAAATGTGGGGAATAAAATTTCCACTGTGAAGTCATTGCAGTTTCATTTTGCTACAATTGAAGCAGCCACAAACCAGTTCTCTGTTAATAACAGATTAGGGGAAGGTGGCTTTGGAGAGGTTTACAAGGGAACCCTTCCTAAAGGGCGAGAAATAGCTGTGAAGAGGTTATCCAGAAGCTCCGGGCAAGGTGTCAAGGAGTTTGAAAATGAGGTGGTTTTGGTCGCCAAGCTTCAGCACAGAAATTTAGTAAGGCTACTGGGATTTTGCTCTGAAAGAGAAGAAAAGATACTTATCTATGAACTTGTGCAGAACAAAAGCCTTGACCACTTTTTATTCGACTCGGATATTCAAGTAAAGTTGGATTGGTCAAGCAGATACAAGATTATAGGTGGGATTGCTAGAGGGATTCTCTATCTCCATCAAGATTCTCGGCTTAAAATCATACATCGCGATCTTAAAGCAAGCAACATATTGTTAGATGGAGAAATGAACCCAAAAATATCAGATTTTGGAATGGCAAGAATATTTGGAGTTGATCAAACTCAAGGAAGAACTAGAAGGATTGTTGGAACTTATGGTTACATGTCTCCAGAGTATGCAATGCATGGACAGTTCTCAGAGAAGTCTGATGTGTATAGTCTTGGTGTCTTAATCTTAGAGATTGTAACAGGCAAGAAAAACACTAAATTCTATCAATCAGACCGTGGCGAAGATCTCTTAACCAATGCTGCTTGGAAACATTGGAGAGATGGGACAGCAGAAGAATTGTTGGATTCAAATCTGAGATGTTCTTATTCAAGAAATGAAGTAATCAAATGTATCTATATTGGTTTACTGTGTGTTCAGGAAGATCCAAAGGAGAGACCTACCATGCAAACCGTATTTCTCATGCTAAGCAGATACTCGTTCACTATGCCATTGCCTCAAAAGCCAGGGTTTTTCCTGTATAGTAAAGCAGAATTGAACCTGCCATCAGTAGCCACTGGATCATCATATCAACCCACTAGCAGCTCAGTCTCATGTTCTGTTAATGAAGCTTCGATTACTGAATTATTCCCTCGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009617 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0042742 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050896 GO:0051704 GO:0051707 GO:0071704 GO:0071944 GO:0098542 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr Stress-antifung

Protein Analysis

669

Amino Acids

74.77

Weight (kDa)

8.52

Isoelectric Point (pI)

42.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Stress-antifung	PF01657	34 - 133	2.2e-23	Salt stress response/antifungal
Stress-antifung	PF01657	154 - 246	2.3e-10	Salt stress response/antifungal
Pkinase	PF00069	342 - 609	5.3e-46	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	343 - 609	4.9e-48	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000283)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G45860 AT4G05200 AT4G05200 AT4G11521 AT4G11530 AT4G23130 AT4G23130 AT4G23130 AT4G23140 AT4G23140 AT4G23150 AT4G23160 AT4G23170 AT4G23180 AT4G23180 AT4G23180 AT4G23230 AT4G23270 AT4G23270 AT4G23270 AT4G23280 AT4G23280 AT4G23280 AT4G23310 AT4G23310
fragaria_vesca	FvH4_3g02772 FvH4_3g02772 FvH4_3g02773 FvH4_3g02773 FvH4_3g02774 FvH4_3g02800 FvH4_3g02820 FvH4_3g02820 FvH4_3g02830
malus_domestica	MD00G1101900.v1.1 MD00G1102100.v1.1 MD00G1102200.v1.1 MD01G1098200.v1.1 MD05G1340000.v1.1 MD05G1340300.v1.1 MD07G1014100.v1.1 MD07G1014300.v1.1 MD07G1014400.v1.1 MD07G1014700.v1.1 MD10G1312900.v1.1 MD11G1022600.v1.1 MD11G1291500.v1.1 MD14G1207100.v1.1 MD16G1096600.v1.1
prunus_persica	Prupe.4G027300_v2.0.a1 Prupe.4G027400_v2.0.a1 Prupe.4G027700_v2.0.a1 Prupe.4G027800_v2.0.a1
pyrus_communis	pycom05g30960 pycom10g00940 pycom10g00950 pycom10g26430 pycom10g26450 pycom10g26460 pycom10g26470 pycom10g26480 pycom10g26490 pycom10g26500 pycom10g26510 pycom10g26570 pycom11g01820 pycom11g04000 pycom14g17130 pycom14g17140 pycom15g28820
rosa_chinensis	RchiOBHm_Chr4g0408141 RchiOBHm_Chr5g0004211 RchiOBHm_Chr5g0004231 RchiOBHm_Chr5g0004241 RchiOBHm_Chr5g0004261
rosa_laevigata	RLG00000008668 RLG00000008672 RLG00000031212 RLG00000031217
rosa_multiflora	Rmu_co8162658.1_g000001 Rmu_co8336297.1_g000001 Rmu_sc0002073.1_g000001 Rmu_sc0004964.1_g000002 Rmu_sc0004964.1_g000003 Rmu_sc0004964.1_g000007 Rmu_sc0006006.1_g000007 Rmu_sc0007868.1_g000015 Rmu_sc0007868.1_g000016 Rmu_sc0007868.1_g000017 Rmu_sc0007868.1_g000021 Rmu_sc0007868.1_g000023 Rmu_sc0019654.1_g000002 Rmu_sc0038540.1_g000001
rosa_roxburghii	Rroxscaffold_1G00071450 Rroxscaffold_1G00071460 Rroxscaffold_1G00071470 Rroxscaffold_1G00071560 Rroxscaffold_1G00071720 Rroxscaffold_1G00071770 Rroxscaffold_5G00352640
rosa_rugosa	Rorug04G0083700 Rorug04G0410700 Rorug04G0410800 Rorug04G0410900
rosa_samantha	Rh4BG145400 Rh4CG154900 Rh4DG141900 Rh5BG037500 Rh5BG037600 Rh5BG037700 Rh5CG041000 Rh5CG041100 Rh5CG041200 Rh5CG041300 Rh5CG041400 Rh5DG037100
rosa_wichuraiana	Rw4G012130 Rw5G003450 Rw5G003460 Rw5G003470 Rw5G003480 Rw5G003640 Rw5G003660 Rw5G003670 Rw5G003680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	663
Acc36I	ACCTGC	1 cut(s)	1920
AccII	CGCG	1 cut(s)	1395
AciI	CCGC	2 cut(s)	215, 472
AclWI	GGATC	3 cut(s)	419, 1790, 1939
AcoI	YGGCCR	1 cut(s)	846
AcsI	RAATTY	6 cut(s)	351, 432, 702, 960, 1186, 1631
AcuI	CTGAAG	3 cut(s)	219, 777, 1160
AfaI	GTAC	3 cut(s)	335, 368, 682
AfiI	CCNNNNNNNGG	3 cut(s)	44, 575, 812
AflIII	ACRYGT	2 cut(s)	641, 1527
AgeI	ACCGGT	1 cut(s)	87
AjnI	CCWGG	2 cut(s)	811, 1876
AjuI	GAANNNNNNNTTGG	2 cut(s)	1038, 1070
AluBI	AGCT	8 cut(s)	71, 484, 656, 1100, 1122, 1174, 1956, 1982
AluI	AGCT	8 cut(s)	71, 484, 656, 1100, 1122, 1174, 1956, 1982
Alw21I	GWGCWC	2 cut(s)	36, 611
Alw26I	GTCTC	3 cut(s)	1536, 1801, 1966
Alw44I	GTGCAC	1 cut(s)	607
AlwI	GGATC	3 cut(s)	419, 1790, 1939
AoxI	GGCC	2 cut(s)	21, 846
ApaLI	GTGCAC	1 cut(s)	607
ApeKI	GCWGC	6 cut(s)	484, 888, 891, 1007, 1673, 1953
ApoI	RAATTY	6 cut(s)	351, 432, 702, 960, 1186, 1631
ArsI	GACNNNNNNTTYG	2 cut(s)	309, 341
AsiGI	ACCGGT	1 cut(s)	87
AspLEI	GCGC	2 cut(s)	387, 664
AspS9I	GGNCC	1 cut(s)	22
AsuC2I	CCSGG	1 cut(s)	1126
AsuHPI	GGTGA	2 cut(s)	268, 765
AsuNHI	GCTAGC	1 cut(s)	487
BaeGI	GKGCMC	1 cut(s)	611
BalI	TGGCCA	1 cut(s)	848
BarI	GAAGNNNNNNTAC	2 cut(s)	1215, 1247
BbsI	GAAGAC	1 cut(s)	638
Bbv12I	GWGCWC	2 cut(s)	36, 611
BbvI	GCAGC	6 cut(s)	471, 875, 878, 1019, 1660, 1965
BccI	CCATC	6 cut(s)	314, 541, 1371, 1418, 1688, 1924
BceAI	ACGGC	1 cut(s)	249
BciT130I	CCWGG	2 cut(s)	813, 1878
BclI	TGATCA	1 cut(s)	1480
BcnI	CCSGG	1 cut(s)	1126
BcoDI	GTCTC	3 cut(s)	1536, 1801, 1966
BfaI	CTAG	5 cut(s)	488, 699, 1344, 1500, 1950
BfmI	CTRYAG	1 cut(s)	309
BfuAI	ACCTGC	1 cut(s)	1920
BglII	AGATCT	2 cut(s)	271, 1657
BisI	GCNGC	6 cut(s)	485, 889, 892, 1008, 1674, 1954
BlpI	GCTNAGC	1 cut(s)	1838
BlsI	GCNGC	6 cut(s)	486, 890, 893, 1009, 1675, 1955
BmcAI	AGTACT	1 cut(s)	335
Bme1390I	CCNGG	3 cut(s)	813, 1126, 1878
BmgT120I	GGNCC	1 cut(s)	22
BmiI	GGNNCC	1 cut(s)	1075
BmrFI	CCNGG	3 cut(s)	813, 1126, 1878
BmrI	ACTGGG	1 cut(s)	1211
BmsI	GCATC	1 cut(s)	141
BmtI	GCTAGC	1 cut(s)	491
BmuI	ACTGGG	1 cut(s)	1211
BpiI	GAAGAC	1 cut(s)	638
BplI	GAGNNNNNCTC	2 cut(s)	1338, 1370
BpmI	CTGGAG	1 cut(s)	1518
Bpu10I	CCTNAGC	1 cut(s)	53
Bpu1102I	GCTNAGC	1 cut(s)	1838
BpuEI	CTTGAG	2 cut(s)	57, 1473
BpuMI	CCSGG	1 cut(s)	1126
BsaBI	GATNNNNATC	2 cut(s)	1235, 1722
BsaI	GGTCTC	1 cut(s)	1801
BsaJI	CCNNGG	5 cut(s)	265, 342, 438, 1648, 1877
BsaWI	WCCGGW	1 cut(s)	87
BsaXI	ACNNNNNCTCC	2 cut(s)	784, 814
Bsc4I	CCNNNNNNNGG	3 cut(s)	44, 575, 812
Bse118I	RCCGGY	1 cut(s)	87
Bse1I	ACTGG	6 cut(s)	114, 139, 688, 1018, 1206, 1933
Bse3DI	GCAATG	3 cut(s)	977, 1551, 1862
Bse8I	GATNNNNATC	2 cut(s)	1235, 1722
BseBI	CCWGG	2 cut(s)	813, 1878
BseDI	CCNNGG	5 cut(s)	265, 342, 438, 1648, 1877
BseGI	GGATG	3 cut(s)	173, 808, 830
BseJI	GATNNNNATC	2 cut(s)	1235, 1722
BseLI	CCNNNNNNNGG	3 cut(s)	44, 575, 812
BseMI	GCAATG	3 cut(s)	977, 1551, 1862
BseMII	CTCAG	3 cut(s)	1575, 1718, 1971
BseNI	ACTGG	6 cut(s)	114, 139, 688, 1018, 1206, 1933
BseRI	GAGGAG	1 cut(s)	149
BseSI	GKGCMC	1 cut(s)	611
BseXI	GCAGC	6 cut(s)	471, 875, 878, 1019, 1660, 1965
BsgI	GTGCAG	1 cut(s)	1271
Bsh1236I	CGCG	1 cut(s)	1395
BshFI	GGCC	2 cut(s)	23, 848
BshTI	ACCGGT	1 cut(s)	87
BsiHKAI	GWGCWC	2 cut(s)	36, 611
BsiSI	CCGG	2 cut(s)	88, 1125
BslFI	GGGAC	1 cut(s)	1711
BslI	CCNNNNNNNGG	3 cut(s)	44, 575, 812
BsmAI	GTCTC	3 cut(s)	1536, 1801, 1966
BsmFI	GGGAC	1 cut(s)	1711
BsnI	GGCC	2 cut(s)	23, 848
Bso31I	GGTCTC	1 cut(s)	1801
Bsp1286I	GDGCHC	2 cut(s)	36, 611
Bsp143I	GATC	7 cut(s)	271, 424, 1396, 1480, 1657, 1795, 1931
Bsp1720I	GCTNAGC	1 cut(s)	1838
Bsp19I	CCATGG	1 cut(s)	438
Bsp68I	TCGCGA	1 cut(s)	1395
BspACI	CCGC	2 cut(s)	215, 472
BspANI	GGCC	2 cut(s)	23, 848
BspCNI	CTCAG	3 cut(s)	1574, 1719, 1970
BspFNI	CGCG	1 cut(s)	1395
BspLI	GGNNCC	1 cut(s)	1075
BspMI	ACCTGC	1 cut(s)	1920
BspOI	GCTAGC	1 cut(s)	491
BspPI	GGATC	3 cut(s)	419, 1790, 1939
BspTNI	GGTCTC	1 cut(s)	1801
BsrDI	GCAATG	3 cut(s)	977, 1551, 1862
BsrFI	RCCGGY	1 cut(s)	87
BsrI	ACTGG	6 cut(s)	114, 139, 688, 1018, 1206, 1933
BssAI	RCCGGY	1 cut(s)	87
BssECI	CCNNGG	5 cut(s)	265, 342, 438, 1648, 1877
BssMI	GATC	7 cut(s)	271, 424, 1396, 1480, 1657, 1795, 1931
BssT1I	CCWWGG	2 cut(s)	342, 438
Bst2UI	CCWGG	2 cut(s)	813, 1878
Bst4CI	ACNGT	6 cut(s)	251, 970, 1557, 1649, 1782, 1825
Bst6I	CTCTTC	3 cut(s)	169, 801, 1100
BstC8I	GCNNGC	4 cut(s)	217, 221, 489, 1408
BstDEI	CTNAG	7 cut(s)	53, 713, 1561, 1600, 1727, 1838, 1957
BstDSI	CCRYGG	3 cut(s)	265, 438, 1648
BstENI	CCTNNNNNAGG	1 cut(s)	573
BstF5I	GGATG	3 cut(s)	173, 808, 830
BstFNI	CGCG	1 cut(s)	1395
BstHHI	GCGC	2 cut(s)	387, 664
BstKTI	GATC	7 cut(s)	274, 427, 1399, 1483, 1660, 1798, 1934
BstMAI	GTCTC	3 cut(s)	1536, 1801, 1966
BstMBI	GATC	7 cut(s)	271, 424, 1396, 1480, 1657, 1795, 1931
BstMWI	GCNNNNNNNGC	4 cut(s)	54, 384, 527, 1873
BstNI	CCWGG	2 cut(s)	813, 1878
BstNSI	RCATGY	2 cut(s)	645, 1531
BstSCI	CCNGG	3 cut(s)	811, 1124, 1876
BstSFI	CTRYAG	1 cut(s)	309
BstSLI	GKGCMC	1 cut(s)	611
BstUI	CGCG	1 cut(s)	1395
BstV1I	GCAGC	6 cut(s)	471, 875, 878, 1019, 1660, 1965
BstV2I	GAAGAC	1 cut(s)	638
BstX2I	RGATCY	4 cut(s)	271, 424, 1657, 1795
BstYI	RGATCY	4 cut(s)	271, 424, 1657, 1795
BsuRI	GGCC	2 cut(s)	23, 848
BtgI	CCRYGG	3 cut(s)	265, 438, 1648
BtgZI	GCGATG	1 cut(s)	1376
BtsCI	GGATG	3 cut(s)	173, 808, 830
BtsIMutI	CAGTG	4 cut(s)	459, 611, 966, 1926
BtuMI	TCGCGA	1 cut(s)	1395
BveI	ACCTGC	1 cut(s)	1920
Cac8I	GCNNGC	4 cut(s)	217, 221, 489, 1408
CfoI	GCGC	2 cut(s)	387, 664
Cfr10I	RCCGGY	1 cut(s)	87
Cfr13I	GGNCC	1 cut(s)	22
Csp6I	GTAC	3 cut(s)	334, 367, 681
CspAI	ACCGGT	1 cut(s)	87
CviAII	CATG	8 cut(s)	19, 439, 642, 1528, 1550, 1816, 1834, 1965
CviQI	GTAC	3 cut(s)	334, 367, 681
DdeI	CTNAG	7 cut(s)	53, 713, 1561, 1600, 1727, 1838, 1957
DpnI	GATC	7 cut(s)	273, 426, 1398, 1482, 1659, 1797, 1933
DpnII	GATC	7 cut(s)	271, 424, 1396, 1480, 1657, 1795, 1931
EaeI	YGGCCR	1 cut(s)	846
Eam1104I	CTCTTC	3 cut(s)	169, 801, 1100
EarI	CTCTTC	3 cut(s)	169, 801, 1100
Eco130I	CCWWGG	2 cut(s)	342, 438
Eco31I	GGTCTC	1 cut(s)	1801
Eco57I	CTGAAG	3 cut(s)	219, 777, 1160
EcoNI	CCTNNNNNAGG	1 cut(s)	573
EcoRII	CCWGG	2 cut(s)	811, 1876
EcoT14I	CCWWGG	2 cut(s)	342, 438
EcoT22I	ATGCAT	1 cut(s)	1551
ErhI	CCWWGG	2 cut(s)	342, 438
FaeI	CATG	8 cut(s)	22, 442, 645, 1531, 1553, 1819, 1837, 1968
FaqI	GGGAC	1 cut(s)	1711
FatI	CATG	8 cut(s)	18, 438, 641, 1527, 1549, 1815, 1833, 1964
FauI	CCCGC	2 cut(s)	208, 479
FbaI	TGATCA	1 cut(s)	1480
Fnu4HI	GCNGC	6 cut(s)	485, 889, 892, 1008, 1674, 1954
FokI	GGATG	3 cut(s)	160, 795, 817
Fsp4HI	GCNGC	6 cut(s)	485, 889, 892, 1008, 1674, 1954
FspBI	CTAG	5 cut(s)	488, 699, 1344, 1500, 1950
FspI	TGCGCA	1 cut(s)	663
GlaI	GCGC	2 cut(s)	386, 663
GluI	GCNGC	6 cut(s)	485, 889, 892, 1008, 1674, 1954
GsuI	CTGGAG	1 cut(s)	1518
HaeIII	GGCC	2 cut(s)	23, 848
HapII	CCGG	2 cut(s)	88, 1125
HhaI	GCGC	2 cut(s)	387, 664
Hin1II	CATG	8 cut(s)	22, 442, 645, 1531, 1553, 1819, 1837, 1968
Hin6I	GCGC	2 cut(s)	385, 662
HinP1I	GCGC	2 cut(s)	385, 662
HindIII	AAGCTT	2 cut(s)	1172, 1980
HinfI	GANTC	6 cut(s)	198, 793, 1283, 1351, 1370, 1718
HpaII	CCGG	2 cut(s)	88, 1125
HphI	GGTGA	2 cut(s)	268, 765
Hpy166II	GTNNAC	6 cut(s)	247, 445, 609, 1066, 1778, 1854
Hpy188I	TCNGA	9 cut(s)	238, 792, 1216, 1288, 1450, 1564, 1573, 1645, 1728
Hpy188III	TCNNGA	8 cut(s)	406, 650, 1116, 1367, 1394, 1535, 1743, 1790
Hpy8I	GTNNAC	6 cut(s)	247, 445, 609, 1066, 1778, 1854
HpyAV	CCTTC	5 cut(s)	15, 780, 1040, 1088, 1497
HpyCH4III	ACNGT	6 cut(s)	251, 970, 1557, 1649, 1782, 1825
HpyCH4IV	ACGT	1 cut(s)	187
HpyF10VI	GCNNNNNNNGC	4 cut(s)	54, 384, 527, 1873
HpyF3I	CTNAG	7 cut(s)	53, 713, 1561, 1600, 1727, 1838, 1957
HpySE526I	ACGT	1 cut(s)	187
Hsp92II	CATG	8 cut(s)	22, 442, 645, 1531, 1553, 1819, 1837, 1968
HspAI	GCGC	2 cut(s)	385, 662
Ksp22I	TGATCA	1 cut(s)	1480
Kzo9I	GATC	7 cut(s)	271, 424, 1396, 1480, 1657, 1795, 1931
LmnI	GCTCC	2 cut(s)	39, 1127
Lsp1109I	GCAGC	6 cut(s)	471, 875, 878, 1019, 1660, 1965
LweI	GCATC	1 cut(s)	141
MaeI	CTAG	5 cut(s)	488, 699, 1344, 1500, 1950
MaeII	ACGT	1 cut(s)	187
MaeIII	GTNAC	4 cut(s)	457, 763, 1523, 1609
MalI	GATC	7 cut(s)	273, 426, 1398, 1482, 1659, 1797, 1933
MboI	GATC	7 cut(s)	271, 424, 1396, 1480, 1657, 1795, 1931
MfeI	CAATTG	1 cut(s)	999
MflI	RGATCY	4 cut(s)	271, 424, 1657, 1795
MhlI	GDGCHC	2 cut(s)	36, 611
MlsI	TGGCCA	1 cut(s)	848
MluNI	TGGCCA	1 cut(s)	848
MlyI	GAGTC	2 cut(s)	787, 1277
MmeI	TCCRAC	6 cut(s)	201, 396, 815, 1284, 1492, 1695
Mox20I	TGGCCA	1 cut(s)	848
Mph1103I	ATGCAT	1 cut(s)	1551
MscI	TGGCCA	1 cut(s)	848
MseI	TTAA	8 cut(s)	150, 836, 1029, 1380, 1401, 1595, 1664, 1974
Msp20I	TGGCCA	1 cut(s)	848
MspA1I	CMGCKG	2 cut(s)	215, 484
MspI	CCGG	2 cut(s)	88, 1125
MspR9I	CCNGG	3 cut(s)	813, 1126, 1878
MunI	CAATTG	1 cut(s)	999
MvaI	CCWGG	2 cut(s)	813, 1878
MvnI	CGCG	1 cut(s)	1395
MwoI	GCNNNNNNNGC	4 cut(s)	54, 384, 527, 1873
NciI	CCSGG	1 cut(s)	1126
NcoI	CCATGG	1 cut(s)	438
NdeII	GATC	7 cut(s)	271, 424, 1396, 1480, 1657, 1795, 1931
NheI	GCTAGC	1 cut(s)	487
NlaIII	CATG	8 cut(s)	22, 442, 645, 1531, 1553, 1819, 1837, 1968
NlaIV	GGNNCC	1 cut(s)	1075
NmeAIII	GCCGAG	1 cut(s)	1354
NmuCI	GTSAC	2 cut(s)	457, 763
NruI	TCGCGA	1 cut(s)	1395
NsbI	TGCGCA	1 cut(s)	663
NsiI	ATGCAT	1 cut(s)	1551
NspI	RCATGY	2 cut(s)	645, 1531
PciI	ACATGT	2 cut(s)	641, 1527
PfeI	GAWTC	4 cut(s)	198, 1351, 1370, 1718
PfoI	TCCNGGA	1 cut(s)	811
PinAI	ACCGGT	1 cut(s)	87
PkrI	GCNGC	6 cut(s)	486, 890, 893, 1009, 1675, 1955
PleI	GAGTC	2 cut(s)	787, 1277
PpsI	GAGTC	2 cut(s)	787, 1277
PscI	ACATGT	2 cut(s)	641, 1527
Psp6I	CCWGG	2 cut(s)	811, 1876
PspGI	CCWGG	2 cut(s)	811, 1876
PspN4I	GGNNCC	1 cut(s)	1075
PspPI	GGNCC	1 cut(s)	22
PsuI	RGATCY	4 cut(s)	271, 424, 1657, 1795
PvuII	CAGCTG	1 cut(s)	484
RruI	TCGCGA	1 cut(s)	1395
RsaI	GTAC	3 cut(s)	335, 368, 682
RsaNI	GTAC	3 cut(s)	334, 367, 681
SaqAI	TTAA	8 cut(s)	150, 836, 1029, 1380, 1401, 1595, 1664, 1974
SatI	GCNGC	6 cut(s)	485, 889, 892, 1008, 1674, 1954
Sau3AI	GATC	7 cut(s)	271, 424, 1396, 1480, 1657, 1795, 1931
Sau96I	GGNCC	1 cut(s)	22
ScaI	AGTACT	1 cut(s)	335
SchI	GAGTC	2 cut(s)	787, 1277
ScrFI	CCNGG	3 cut(s)	813, 1126, 1878
SduI	GDGCHC	2 cut(s)	36, 611
SfaNI	GCATC	1 cut(s)	141
SfcI	CTRYAG	1 cut(s)	309
SmlI	CTYRAG	2 cut(s)	72, 1488
SmoI	CTYRAG	2 cut(s)	72, 1488
SsiI	CCGC	2 cut(s)	215, 472
SspI	AATATT	1 cut(s)	1470
SspMI	CTAG	5 cut(s)	488, 699, 1344, 1500, 1950
StyD4I	CCNGG	3 cut(s)	811, 1124, 1876
StyI	CCWWGG	2 cut(s)	342, 438
TaaI	ACNGT	6 cut(s)	251, 970, 1557, 1649, 1782, 1825
TaiI	ACGT	1 cut(s)	190
TaqI	TCGA	5 cut(s)	649, 727, 1281, 1985, 2005
TatI	WGTACW	2 cut(s)	333, 680
TfiI	GAWTC	4 cut(s)	198, 1351, 1370, 1718
Tru1I	TTAA	8 cut(s)	150, 836, 1029, 1380, 1401, 1595, 1664, 1974
Tru9I	TTAA	8 cut(s)	150, 836, 1029, 1380, 1401, 1595, 1664, 1974
TscAI	CASTG	4 cut(s)	466, 611, 973, 1933
TseFI	GTSAC	2 cut(s)	457, 763
TseI	GCWGC	6 cut(s)	484, 888, 891, 1007, 1673, 1953
Tsp45I	GTSAC	2 cut(s)	457, 763
TspDTI	ATGAA	7 cut(s)	7, 747, 977, 1257, 1448, 1764, 1992
TspRI	CASTG	4 cut(s)	466, 611, 973, 1933
VneI	GTGCAC	1 cut(s)	607
XagI	CCTNNNNNAGG	1 cut(s)	573
XapI	RAATTY	6 cut(s)	351, 432, 702, 960, 1186, 1631
XceI	RCATGY	2 cut(s)	645, 1531
XspI	CTAG	5 cut(s)	488, 699, 1344, 1500, 1950
ZrmI	AGTACT	1 cut(s)	335
Zsp2I	ATGCAT	1 cut(s)	1551

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.