Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp04

Orthogroup ID

OG0000283

Physical Location & Seq

Genomic Coordinates Forward (+)

1266235 .. 1271530

Gene Structure 5296 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.4G027300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2376 bp

ATGGCTCCGGAGTATGCAATGGAGGGTCTATTTTCTGTAAAATCTGATGTTTACAGCTTTGGGGTAATCTTGCTAGAGATTATTAGTGGGAAAAGGAATAGTGGGTTCTATCTCACAGAACATGCCAAGACACTCGTTGCATATGCATGGAGACTATGGAAAGATGGAAAAGAATTGGAATTTGTGGAACCTTTGTTGATGGAATCTTGGCCAACAGCAGAGGTTTTGAAATGCATGCACATTGCGCTTTTATGTGTCCAGGAAGACCCTGAAGAGAGGCCTACAATGTCAGCTGTGGTTGTATTGCTTGGAAGTGAATCAATAGATCTTCCTGAGCCAAAGCAACCGGCAATATTTTCCGTAGGTAGAATTCCAATTGGCGAGTCTAAAACTGATCCTACTTCAAACGGGCTCACTCTTTCTATTGTTTCGCCACGCTTTCCCAGCCCCGCTGAAGCTGCTGACCTCAGCCATTTCTGCCCAAACACCACCACCTTCACCCCAAACTCCACATTCCAGTCCAACCTCAACCGCCTTCTCTCCACCCTATCCTCCAACGCCACCCATCCCTCCGGCTTCTACAACGCCACCGCCTCCTCCTCCTCCCCAAACGACACCGTCTACGGCCTCTTCCTCTGCCGCGGCGACGTCGCCGCCGACGCTTGCAAAACCTGCGTCTCCACCGCAACCTCCGAGGCCGTCCAGCGCTGCCCCACTGAGAAACAGGTTATCATCTGGTACGACGACTGCATGCTGCGCTATTCCAACGAGTCCTTCTTTTCCACCGCCGCCGAGTCGCCTGGCATTTTCATGTGGAACACCCAGAACGCCACCGAACCAACCCGGTTCAACCAGGTCTTGGCGACGGGCATGAACGACGTGGTCACCGAGGCTGCCAACGACGCCGACAAGTTTGCGACGAGTCAGGGGAATGTTAGTGGGTTGGTTTCGATTTACAGCCTGGGGCAGTGCACGCAGGACCTGTCCTCAGCGGATTGCAACCGGTGTCTCACGGGTGCCAAAGCCCAATTTCCGAATTGTTGCAATGGAAAGCTCGGGGCACGAGTTTTGTATCCGAGTTGTACCGTTAGGTACGAAGTCTACCCCTTCTACCTCCAAAACTCCACGTCAGCGCCTCAGCCTTCACCGGGGGCTCTGCCTCCTCCTCCTCCTCCGCCGCCGCCTAAAGGAAAAAGCAAAATCCCTACAATTGTTGCCATTGTTGTCCCAATTGCCGTCTCTGTTCTACTTTTTGTTGTGGGCTGCTGTTTCATTACTAGGAGAGCAAGAAAGAAGCGCAGTGCAGCAGCAGAGGCACCAAGCGGTGTGAATGACATTAGTAGTGTAGAGTCTTTGCAATTTGATTTTAGTACCATTGTAGCGGCCACGAACAATTTCTCTGATGATAATAAGTTAGGGGAAGGTGGATTTGGTCAAGTTTACAAGGGTATACTTTCAAATGGTCAACAAGTAGCTGTGAAGAGGCTTTCAAGGAACTCTGGCCAAGGTGCTGAGGAATTTAAGAACGAGATGGTATTGGTAGCCAAGCTTCAACACAGAAATCTGGTCAGGCTATATGGATTTTGCTTGGAAGGAGAAGAAAAGATACTTGTTTATGAATATGTCTCCAACAAAAGCCTTGACTATTTTCTATTTGACCCTGAGAAACAAGGACAATTGGATTGGTCAAGACGTTACAAGATTATTGCAGGGATTGCTCGAGGAATAATGTACCTACACGAAGATTCCCGACTTAGAATTATACATCGTGATCTCAAGGCCAGCAATATATTGTTAGATGGGGAGATGCATCCAAAAATATCTGATTTTGGCATGGCCAGGATTTTTGGGGTTGATCAAACTCAAGCAAATACAAGTAGAATTGTTGGAACATATGGCTATATGTCTCCAGAGTATGCAATGCATGGACAATTTTCTGTCAAGTCCGATCTATATAGTTTCGGTGTTTTACTGCTAGAAATCATAAGTGGCAAGAAGAATAGTTATTTCTTTCAAACTGATGCAGCTGAAGACCTCATGAGCCATGCTTGGAAACTATGGAGAGATGGGACGCCTTTGGAATTGTTGGATCCGAGTATGAGAGATTCTTATTCTAGGAGTGAAGTTATAAGGTGTATCCATATCGGCTTACTTTGTGTTCAGGAAGATCCAGCGGACAGACCTACAATGCAATCCGTAGTTCTCATGCTTAATAGCTACTCTGTGACTCTGCCATTACCTGAACAGCCAGCATTTTTCCTTCGAAGTCGAACGGAGGGGAACATGCCAAAGATAACTTTGGAGTCTGATCTATCTATCAGTAAGTCAACTCCATCCGTTGATGAAGCATCTATCACTGCAGTATACCCTCGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009617 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0042742 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050896 GO:0051704 GO:0051707 GO:0071704 GO:0071944 GO:0098542 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr Stress-antifung

Protein Analysis

792

Amino Acids

87.08

Weight (kDa)

5.59

Isoelectric Point (pI)

49.28

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000283)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G45860 AT4G05200 AT4G05200 AT4G11521 AT4G11530 AT4G23130 AT4G23130 AT4G23130 AT4G23140 AT4G23140 AT4G23150 AT4G23160 AT4G23170 AT4G23180 AT4G23180 AT4G23180 AT4G23230 AT4G23270 AT4G23270 AT4G23270 AT4G23280 AT4G23280 AT4G23280 AT4G23310 AT4G23310
fragaria_vesca	FvH4_3g02772 FvH4_3g02772 FvH4_3g02773 FvH4_3g02773 FvH4_3g02774 FvH4_3g02800 FvH4_3g02820 FvH4_3g02820 FvH4_3g02830
malus_domestica	MD00G1101900.v1.1 MD00G1102100.v1.1 MD00G1102200.v1.1 MD01G1098200.v1.1 MD05G1340000.v1.1 MD05G1340300.v1.1 MD07G1014100.v1.1 MD07G1014300.v1.1 MD07G1014400.v1.1 MD07G1014700.v1.1 MD10G1312900.v1.1 MD11G1022600.v1.1 MD11G1291500.v1.1 MD14G1207100.v1.1 MD16G1096600.v1.1
prunus_persica	Prupe.4G027300_v2.0.a1 Prupe.4G027400_v2.0.a1 Prupe.4G027700_v2.0.a1 Prupe.4G027800_v2.0.a1
pyrus_communis	pycom05g30960 pycom10g00940 pycom10g00950 pycom10g26430 pycom10g26450 pycom10g26460 pycom10g26470 pycom10g26480 pycom10g26490 pycom10g26500 pycom10g26510 pycom10g26570 pycom11g01820 pycom11g04000 pycom14g17130 pycom14g17140 pycom15g28820
rosa_chinensis	RchiOBHm_Chr4g0408141 RchiOBHm_Chr5g0004211 RchiOBHm_Chr5g0004231 RchiOBHm_Chr5g0004241 RchiOBHm_Chr5g0004261
rosa_laevigata	RLG00000008668 RLG00000008672 RLG00000031212 RLG00000031217
rosa_multiflora	Rmu_co8162658.1_g000001 Rmu_co8336297.1_g000001 Rmu_sc0002073.1_g000001 Rmu_sc0004964.1_g000002 Rmu_sc0004964.1_g000003 Rmu_sc0004964.1_g000007 Rmu_sc0006006.1_g000007 Rmu_sc0007868.1_g000015 Rmu_sc0007868.1_g000016 Rmu_sc0007868.1_g000017 Rmu_sc0007868.1_g000021 Rmu_sc0007868.1_g000023 Rmu_sc0019654.1_g000002 Rmu_sc0038540.1_g000001
rosa_roxburghii	Rroxscaffold_1G00071450 Rroxscaffold_1G00071460 Rroxscaffold_1G00071470 Rroxscaffold_1G00071560 Rroxscaffold_1G00071720 Rroxscaffold_1G00071770 Rroxscaffold_5G00352640
rosa_rugosa	Rorug04G0083700 Rorug04G0410700 Rorug04G0410800 Rorug04G0410900
rosa_samantha	Rh4BG145400 Rh4CG154900 Rh4DG141900 Rh5BG037500 Rh5BG037600 Rh5BG037700 Rh5CG041000 Rh5CG041100 Rh5CG041200 Rh5CG041300 Rh5CG041400 Rh5DG037100
rosa_wichuraiana	Rw4G012130 Rw5G003450 Rw5G003460 Rw5G003470 Rw5G003480 Rw5G003640 Rw5G003660 Rw5G003670 Rw5G003680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2129
AatII	GACGTC	1 cut(s)	651
Acc36I	ACCTGC	1 cut(s)	680
AccB1I	GGYRCC	2 cut(s)	1016, 1315
AccB7I	CCANNNNNTGG	1 cut(s)	859
AccI	GTMKAC	4 cut(s)	621, 1101, 1450, 2364
AccII	CGCG	1 cut(s)	642
AccIII	TCCGGA	1 cut(s)	7
AclWI	GGATC	4 cut(s)	389, 2084, 2097, 2162
AcoI	YGGCCR	4 cut(s)	209, 1383, 1501, 1836
AcsI	RAATTY	3 cut(s)	179, 369, 1517
AcuI	CTGAAG	3 cut(s)	291, 474, 2049
AcyI	GRCGYC	3 cut(s)	648, 903, 2072
AfaI	GTAC	5 cut(s)	740, 1084, 1094, 1372, 1733
AfeI	AGCGCT	1 cut(s)	707
AfiI	CCNNNNNNNGG	3 cut(s)	859, 1148, 1187
AgeI	ACCGGT	1 cut(s)	1002
AgsI	TTSAA	7 cut(s)	229, 405, 850, 1458, 1491, 1553, 2015
AjiI	CACGTC	2 cut(s)	880, 1128
AjnI	CCWGG	5 cut(s)	258, 799, 852, 960, 1838
AjuI	GAANNNNNNNTTGG	4 cut(s)	758, 790, 1413, 1445
AluBI	AGCT	8 cut(s)	57, 293, 458, 1054, 1475, 1549, 2027, 2217
AluI	AGCT	8 cut(s)	57, 293, 458, 1054, 1475, 1549, 2027, 2217
Alw21I	GWGCWC	1 cut(s)	974
Alw26I	GTCTC	6 cut(s)	145, 682, 1013, 1243, 1630, 1911
Alw44I	GTGCAC	1 cut(s)	970
AlwI	GGATC	4 cut(s)	389, 2084, 2097, 2162
AlwNI	CAGNNNCTG	1 cut(s)	982
Ama87I	CYCGRG	2 cut(s)	1055, 1719
Aor13HI	TCCGGA	1 cut(s)	7
Aor51HI	AGCGCT	1 cut(s)	707
AoxI	GGCC	8 cut(s)	209, 278, 625, 696, 1383, 1501, 1779, 1836
ApaLI	GTGCAC	1 cut(s)	970
ApeKI	GCWGC	8 cut(s)	458, 708, 754, 893, 1263, 1304, 1307, 2024
ApoI	RAATTY	3 cut(s)	179, 369, 1517
ArsI	GACNNNNNNTTYG	2 cut(s)	660, 692
AsiGI	ACCGGT	1 cut(s)	1002
Asp700I	GAANNNNTTC	1 cut(s)	1394
AspLEI	GCGC	5 cut(s)	247, 708, 759, 1135, 1299
AspS9I	GGNCC	1 cut(s)	979
AsuC2I	CCSGG	2 cut(s)	844, 1149
AsuHPI	GGTGA	3 cut(s)	490, 877, 1137
AsuII	TTCGAA	1 cut(s)	2263
AvaI	CYCGRG	2 cut(s)	1055, 1719
AvaII	GGWCC	1 cut(s)	979
BaeGI	GKGCMC	2 cut(s)	974, 1063
BalI	TGGCCA	3 cut(s)	211, 1503, 1838
BamHI	GGATCC	1 cut(s)	2089
BanI	GGYRCC	2 cut(s)	1016, 1315
BanII	GRGCYC	2 cut(s)	414, 1156
BarI	GAAGNNNNNNTAC	4 cut(s)	1533, 1565, 1590, 1622
BauI	CACGAG	1 cut(s)	1062
BbsI	GAAGAC	2 cut(s)	270, 2037
Bbv12I	GWGCWC	1 cut(s)	974
BbvCI	CCTCAGC	4 cut(s)	467, 988, 1137, 1512
BbvI	GCAGC	8 cut(s)	445, 695, 741, 880, 1250, 1316, 1319, 2036
BccI	CCATC	7 cut(s)	158, 193, 573, 1525, 1793, 2060, 2341
BceAI	ACGGC	3 cut(s)	640, 683, 1220
BcgI	CGANNNNNNTGC	2 cut(s)	896, 930
BciT130I	CCWGG	5 cut(s)	260, 801, 854, 962, 1840
BciVI	GTATCC	2 cut(s)	1083, 2147
BclI	TGATCA	1 cut(s)	1855
BcnI	CCSGG	2 cut(s)	844, 1149
BcoDI	GTCTC	6 cut(s)	145, 682, 1013, 1243, 1630, 1911
BfaI	CTAG	4 cut(s)	74, 1278, 1976, 2115
BfmI	CTRYAG	1 cut(s)	2358
BfoI	RGCGCY	2 cut(s)	709, 1136
BfuAI	ACCTGC	1 cut(s)	680
BfuI	GTATCC	2 cut(s)	1083, 2147
BglII	AGATCT	1 cut(s)	325
Bme1390I	CCNGG	7 cut(s)	260, 801, 844, 854, 962, 1149, 1840
Bme18I	GGWCC	1 cut(s)	979
BmeT110I	CYCGRG	2 cut(s)	1055, 1719
BmgBI	CACGTC	2 cut(s)	880, 1128
BmgT120I	GGNCC	1 cut(s)	979
BmiI	GGNNCC	5 cut(s)	6, 189, 1018, 1317, 2091
BmrFI	CCNGG	7 cut(s)	260, 801, 844, 854, 962, 1149, 1840
BmsI	GCATC	4 cut(s)	1797, 1819, 2011, 2357
BpiI	GAAGAC	2 cut(s)	270, 2037
BpmI	CTGGAG	1 cut(s)	1893
Bpu10I	CCTNAGC	5 cut(s)	333, 467, 988, 1137, 1512
Bpu14I	TTCGAA	1 cut(s)	2263
BpuEI	CTTGAG	2 cut(s)	1760, 1848
BpuMI	CCSGG	2 cut(s)	844, 1149
BsaHI	GRCGYC	3 cut(s)	648, 903, 2072
BsaJI	CCNNGG	6 cut(s)	640, 693, 888, 961, 1148, 1504
BsaWI	WCCGGW	2 cut(s)	7, 1002
Bsc4I	CCNNNNNNNGG	3 cut(s)	859, 1148, 1187
Bse118I	RCCGGY	2 cut(s)	346, 1002
Bse1I	ACTGG	1 cut(s)	517
Bse3DI	GCAATG	4 cut(s)	24, 240, 1051, 1926
BseAI	TCCGGA	1 cut(s)	7
BseBI	CCWGG	5 cut(s)	260, 801, 854, 962, 1840
BseDI	CCNNGG	6 cut(s)	640, 693, 888, 961, 1148, 1504
BseGI	GGATG	3 cut(s)	565, 1810, 2333
BseLI	CCNNNNNNNGG	3 cut(s)	859, 1148, 1187
BseMI	GCAATG	4 cut(s)	24, 240, 1051, 1926
BseMII	CTCAG	7 cut(s)	324, 481, 708, 1002, 1151, 1503, 1653
BseNI	ACTGG	1 cut(s)	517
BseRI	GAGGAG	7 cut(s)	586, 589, 592, 1152, 1155, 1158, 1161
BseSI	GKGCMC	2 cut(s)	974, 1063
BseXI	GCAGC	8 cut(s)	445, 695, 741, 880, 1250, 1316, 1319, 2036
BseYI	CCCAGC	1 cut(s)	443
BsgI	GTGCAG	1 cut(s)	1323
Bsh1236I	CGCG	1 cut(s)	642
BshFI	GGCC	8 cut(s)	211, 280, 627, 698, 1385, 1503, 1781, 1838
BshNI	GGYRCC	2 cut(s)	1016, 1315
BshTI	ACCGGT	1 cut(s)	1002
BsiHKAI	GWGCWC	1 cut(s)	974
BsiHKCI	CYCGRG	2 cut(s)	1055, 1719
BsiSI	CCGG	6 cut(s)	8, 347, 573, 844, 1003, 1148
BslFI	GGGAC	2 cut(s)	1211, 2083
BslI	CCNNNNNNNGG	3 cut(s)	859, 1148, 1187
BsmAI	GTCTC	6 cut(s)	145, 682, 1013, 1243, 1630, 1911
BsmBI	CGTCTC	2 cut(s)	682, 1243
BsmFI	GGGAC	2 cut(s)	1211, 2083
BsnI	GGCC	8 cut(s)	211, 280, 627, 698, 1385, 1503, 1781, 1838
BsoBI	CYCGRG	2 cut(s)	1055, 1719
Bsp119I	TTCGAA	1 cut(s)	2263
Bsp1286I	GDGCHC	4 cut(s)	414, 974, 1063, 1156
Bsp13I	TCCGGA	1 cut(s)	7
Bsp143I	GATC	8 cut(s)	325, 394, 1771, 1855, 1948, 2089, 2167, 2308
BspANI	GGCC	8 cut(s)	211, 280, 627, 698, 1385, 1503, 1781, 1838
BspCNI	CTCAG	7 cut(s)	325, 480, 709, 1001, 1150, 1504, 1654
BspEI	TCCGGA	1 cut(s)	7
BspFNI	CGCG	1 cut(s)	642
BspHI	TCATGA	1 cut(s)	2037
BspLI	GGNNCC	5 cut(s)	6, 189, 1018, 1317, 2091
BspMAI	CTGCAG	1 cut(s)	2362
BspMI	ACCTGC	1 cut(s)	680
BspPI	GGATC	4 cut(s)	389, 2084, 2097, 2162
BspT104I	TTCGAA	1 cut(s)	2263
BspT107I	GGYRCC	2 cut(s)	1016, 1315
BsrDI	GCAATG	4 cut(s)	24, 240, 1051, 1926
BsrFI	RCCGGY	2 cut(s)	346, 1002
BsrI	ACTGG	1 cut(s)	517
BssAI	RCCGGY	2 cut(s)	346, 1002
BssECI	CCNNGG	6 cut(s)	640, 693, 888, 961, 1148, 1504
BssMI	GATC	8 cut(s)	325, 394, 1771, 1855, 1948, 2089, 2167, 2308
BssNAI	GTATAC	2 cut(s)	1451, 2365
BssNI	GRCGYC	3 cut(s)	648, 903, 2072
BssSI	CACGAG	1 cut(s)	1062
BssT1I	CCWWGG	1 cut(s)	1504
Bst1107I	GTATAC	2 cut(s)	1451, 2365
Bst2BI	CACGAG	1 cut(s)	1062
Bst2UI	CCWGG	5 cut(s)	260, 801, 854, 962, 1840
Bst4CI	ACNGT	2 cut(s)	619, 1087
Bst6I	CTCTTC	3 cut(s)	267, 635, 1475
BstACI	GRCGYC	3 cut(s)	648, 903, 2072
BstAPI	GCANNNNNTGC	2 cut(s)	672, 1715
BstBI	TTCGAA	1 cut(s)	2263
BstC8I	GCNNGC	6 cut(s)	236, 664, 752, 974, 1783, 2250
BstDEI	CTNAG	8 cut(s)	333, 467, 717, 988, 1137, 1512, 1662, 1754
BstDSI	CCRYGG	1 cut(s)	640
BstEII	GGTNACC	1 cut(s)	883
BstF5I	GGATG	3 cut(s)	565, 1810, 2333
BstFNI	CGCG	1 cut(s)	642
BstH2I	RGCGCY	2 cut(s)	709, 1136
BstHHI	GCGC	5 cut(s)	247, 708, 759, 1135, 1299
BstKTI	GATC	8 cut(s)	328, 397, 1774, 1858, 1951, 2092, 2170, 2311
BstMAI	GTCTC	6 cut(s)	145, 682, 1013, 1243, 1630, 1911
BstMBI	GATC	8 cut(s)	325, 394, 1771, 1855, 1948, 2089, 2167, 2308
BstNI	CCWGG	5 cut(s)	260, 801, 854, 962, 1840
BstNSI	RCATGY	4 cut(s)	125, 238, 754, 2287
BstPI	GGTNACC	1 cut(s)	883
BstSCI	CCNGG	7 cut(s)	258, 799, 842, 852, 960, 1147, 1838
BstSFI	CTRYAG	1 cut(s)	2358
BstSLI	GKGCMC	2 cut(s)	974, 1063
BstUI	CGCG	1 cut(s)	642
BstV1I	GCAGC	8 cut(s)	445, 695, 741, 880, 1250, 1316, 1319, 2036
BstV2I	GAAGAC	2 cut(s)	270, 2037
BstX2I	RGATCY	3 cut(s)	325, 2089, 2167
BstYI	RGATCY	3 cut(s)	325, 2089, 2167
BstZ17I	GTATAC	2 cut(s)	1451, 2365
BsuI	GTATCC	2 cut(s)	1083, 2147
BsuRI	GGCC	8 cut(s)	211, 280, 627, 698, 1385, 1503, 1781, 1838
BtgI	CCRYGG	1 cut(s)	640
BtrI	CACGTC	2 cut(s)	880, 1128
BtsCI	GGATG	3 cut(s)	565, 1810, 2333
BtsI	GCAGTG	3 cut(s)	974, 1306, 2355
BtsIMutI	CAGTG	4 cut(s)	714, 974, 1306, 2355
BveI	ACCTGC	1 cut(s)	680
Cac8I	GCNNGC	6 cut(s)	236, 664, 752, 974, 1783, 2250
CaiI	CAGNNNCTG	1 cut(s)	982
CciI	TCATGA	1 cut(s)	2037
CfoI	GCGC	5 cut(s)	247, 708, 759, 1135, 1299
Cfr10I	RCCGGY	2 cut(s)	346, 1002
Cfr13I	GGNCC	1 cut(s)	979
Cfr42I	CCGCGG	1 cut(s)	643
CseI	GACGC	4 cut(s)	664, 668, 911, 2080
CsiI	ACCWGGT	1 cut(s)	852
Csp6I	GTAC	5 cut(s)	739, 1083, 1093, 1371, 1732
CspAI	ACCGGT	1 cut(s)	1002
CviQI	GTAC	5 cut(s)	739, 1083, 1093, 1371, 1732
DdeI	CTNAG	8 cut(s)	333, 467, 717, 988, 1137, 1512, 1662, 1754
DpnI	GATC	8 cut(s)	327, 396, 1773, 1857, 1950, 2091, 2169, 2310
DpnII	GATC	8 cut(s)	325, 394, 1771, 1855, 1948, 2089, 2167, 2308
EaeI	YGGCCR	4 cut(s)	209, 1383, 1501, 1836
Eam1104I	CTCTTC	3 cut(s)	267, 635, 1475
EarI	CTCTTC	3 cut(s)	267, 635, 1475
EciI	GGCGGA	1 cut(s)	1164
Eco130I	CCWWGG	1 cut(s)	1504
Eco147I	AGGCCT	1 cut(s)	280
Eco24I	GRGCYC	2 cut(s)	414, 1156
Eco47I	GGWCC	1 cut(s)	979
Eco47III	AGCGCT	1 cut(s)	707
Eco57I	CTGAAG	3 cut(s)	291, 474, 2049
Eco88I	CYCGRG	2 cut(s)	1055, 1719
Eco91I	GGTNACC	1 cut(s)	883
EcoO109I	RGGNCCY	1 cut(s)	979
EcoO65I	GGTNACC	1 cut(s)	883
EcoRI	GAATTC	1 cut(s)	369
EcoRII	CCWGG	5 cut(s)	258, 799, 852, 960, 1838
EcoT14I	CCWWGG	1 cut(s)	1504
EcoT22I	ATGCAT	4 cut(s)	148, 236, 1812, 1926
EcoT38I	GRGCYC	2 cut(s)	414, 1156
ErhI	CCWWGG	1 cut(s)	1504
Esp3I	CGTCTC	2 cut(s)	682, 1243
FaqI	GGGAC	2 cut(s)	1211, 2083
FauI	CCCGC	1 cut(s)	457
FauNDI	CATATG	2 cut(s)	142, 1894
FbaI	TGATCA	1 cut(s)	1855
FblI	GTMKAC	4 cut(s)	621, 1101, 1450, 2364
FokI	GGATG	3 cut(s)	552, 1797, 2320
FriOI	GRGCYC	2 cut(s)	414, 1156
FspBI	CTAG	4 cut(s)	74, 1278, 1976, 2115
GlaI	GCGC	5 cut(s)	246, 707, 758, 1134, 1298
GsaI	CCCAGC	1 cut(s)	447
GsuI	CTGGAG	1 cut(s)	1893
HaeII	RGCGCY	2 cut(s)	709, 1136
HaeIII	GGCC	8 cut(s)	211, 280, 627, 698, 1385, 1503, 1781, 1838
HapII	CCGG	6 cut(s)	8, 347, 573, 844, 1003, 1148
HgaI	GACGC	4 cut(s)	664, 668, 911, 2080
HhaI	GCGC	5 cut(s)	247, 708, 759, 1135, 1299
Hin1I	GRCGYC	3 cut(s)	648, 903, 2072
Hin6I	GCGC	5 cut(s)	245, 706, 757, 1133, 1297
HinP1I	GCGC	5 cut(s)	245, 706, 757, 1133, 1297
HincII	GTYRAC	2 cut(s)	1466, 2328
HindII	GTYRAC	2 cut(s)	1466, 2328
HindIII	AAGCTT	1 cut(s)	1547
HpaII	CCGG	6 cut(s)	8, 347, 573, 844, 1003, 1148
HphI	GGTGA	3 cut(s)	490, 877, 1137
Hpy166II	GTNNAC	9 cut(s)	52, 622, 972, 1102, 1441, 1451, 1466, 2328, 2365
Hpy188I	TCNGA	9 cut(s)	46, 694, 1035, 1077, 1402, 1825, 1948, 2094, 2308
Hpy188III	TCNNGA	8 cut(s)	8, 332, 1689, 1749, 1769, 1910, 2038, 2162
Hpy8I	GTNNAC	9 cut(s)	52, 622, 972, 1102, 1441, 1451, 1466, 2328, 2365
Hpy99I	CGWCG	8 cut(s)	650, 653, 662, 746, 868, 881, 905, 922
HpyAV	CCTTC	8 cut(s)	505, 545, 784, 1117, 1152, 1415, 1586, 2270
HpyCH4III	ACNGT	2 cut(s)	619, 1087
HpyCH4IV	ACGT	4 cut(s)	648, 879, 1127, 1693
HpyF3I	CTNAG	8 cut(s)	333, 467, 717, 988, 1137, 1512, 1662, 1754
HpySE526I	ACGT	4 cut(s)	648, 879, 1127, 1693
Hsp92I	GRCGYC	3 cut(s)	648, 903, 2072
HspAI	GCGC	5 cut(s)	245, 706, 757, 1133, 1297
Kpn2I	TCCGGA	1 cut(s)	7
Ksp22I	TGATCA	1 cut(s)	1855
KspI	CCGCGG	1 cut(s)	643
Kzo9I	GATC	8 cut(s)	325, 394, 1771, 1855, 1948, 2089, 2167, 2308
LmnI	GCTCC	1 cut(s)	10
Lsp1109I	GCAGC	8 cut(s)	445, 695, 741, 880, 1250, 1316, 1319, 2036
LweI	GCATC	4 cut(s)	1797, 1819, 2011, 2357
MabI	ACCWGGT	1 cut(s)	852
MaeI	CTAG	4 cut(s)	74, 1278, 1976, 2115
MaeII	ACGT	4 cut(s)	648, 879, 1127, 1693
MaeIII	GTNAC	3 cut(s)	883, 1694, 2224
MalI	GATC	8 cut(s)	327, 396, 1773, 1857, 1950, 2091, 2169, 2310
MboI	GATC	8 cut(s)	325, 394, 1771, 1855, 1948, 2089, 2167, 2308
MfeI	CAATTG	4 cut(s)	375, 1209, 1230, 1676
MflI	RGATCY	3 cut(s)	325, 2089, 2167
MhlI	GDGCHC	4 cut(s)	414, 974, 1063, 1156
MlsI	TGGCCA	3 cut(s)	211, 1503, 1838
MluNI	TGGCCA	3 cut(s)	211, 1503, 1838
MlyI	GAGTC	7 cut(s)	392, 779, 803, 931, 1358, 2221, 2312
MmeI	TCCRAC	6 cut(s)	546, 579, 789, 1653, 1867, 2067
Mox20I	TGGCCA	3 cut(s)	211, 1503, 1838
Mph1103I	ATGCAT	4 cut(s)	148, 236, 1812, 1926
MroI	TCCGGA	1 cut(s)	7
MroXI	GAANNNNTTC	1 cut(s)	1394
MscI	TGGCCA	3 cut(s)	211, 1503, 1838
MseI	TTAA	2 cut(s)	1521, 2211
MslI	CAYNNNNRTG	2 cut(s)	145, 809
Msp20I	TGGCCA	3 cut(s)	211, 1503, 1838
MspA1I	CMGCKG	6 cut(s)	293, 452, 642, 992, 2027, 2174
MspI	CCGG	6 cut(s)	8, 347, 573, 844, 1003, 1148
MspR9I	CCNGG	7 cut(s)	260, 801, 844, 854, 962, 1149, 1840
MunI	CAATTG	4 cut(s)	375, 1209, 1230, 1676
MvaI	CCWGG	5 cut(s)	260, 801, 854, 962, 1840
MvnI	CGCG	1 cut(s)	642
NciI	CCSGG	2 cut(s)	844, 1149
NdeI	CATATG	2 cut(s)	142, 1894
NdeII	GATC	8 cut(s)	325, 394, 1771, 1855, 1948, 2089, 2167, 2308
NlaIV	GGNNCC	5 cut(s)	6, 189, 1018, 1317, 2091
NmeAIII	GCCGAG	1 cut(s)	817
NmuCI	GTSAC	2 cut(s)	883, 2224
NsiI	ATGCAT	4 cut(s)	148, 236, 1812, 1926
NspI	RCATGY	4 cut(s)	125, 238, 754, 2287
NspV	TTCGAA	1 cut(s)	2263
PaeI	GCATGC	2 cut(s)	238, 754
PaeR7I	CTCGAG	1 cut(s)	1719
PagI	TCATGA	1 cut(s)	2037
PceI	AGGCCT	1 cut(s)	280
PcsI	WCGNNNNNNNCGW	2 cut(s)	654, 885
PdmI	GAANNNNTTC	1 cut(s)	1394
PfeI	GAWTC	4 cut(s)	203, 317, 1745, 2105
PflFI	GACNNNGTC	2 cut(s)	617, 881
PflMI	CCANNNNNTGG	1 cut(s)	859
PfoI	TCCNGGA	1 cut(s)	258
PinAI	ACCGGT	1 cut(s)	1002
PleI	GAGTC	7 cut(s)	391, 778, 802, 930, 1357, 2221, 2311
PpsI	GAGTC	7 cut(s)	391, 778, 802, 930, 1357, 2221, 2311
PpuMI	RGGWCCY	1 cut(s)	979
PsiI	TTATAA	1 cut(s)	2129
Psp5II	RGGWCCY	1 cut(s)	979
Psp6I	CCWGG	5 cut(s)	258, 799, 852, 960, 1838
PspEI	GGTNACC	1 cut(s)	883
PspFI	CCCAGC	1 cut(s)	443
PspGI	CCWGG	5 cut(s)	258, 799, 852, 960, 1838
PspN4I	GGNNCC	5 cut(s)	6, 189, 1018, 1317, 2091
PspPI	GGNCC	1 cut(s)	979
PspPPI	RGGWCCY	1 cut(s)	979
PspXI	VCTCGAGB	1 cut(s)	1719
PstI	CTGCAG	1 cut(s)	2362
PstNI	CAGNNNCTG	1 cut(s)	982
PsuI	RGATCY	3 cut(s)	325, 2089, 2167
PsyI	GACNNNGTC	2 cut(s)	617, 881
PvuII	CAGCTG	2 cut(s)	293, 2027
RsaI	GTAC	5 cut(s)	740, 1084, 1094, 1372, 1733
RsaNI	GTAC	5 cut(s)	739, 1083, 1093, 1371, 1732
RseI	CAYNNNNRTG	2 cut(s)	145, 809
SacII	CCGCGG	1 cut(s)	643
SaqAI	TTAA	2 cut(s)	1521, 2211
Sau3AI	GATC	8 cut(s)	325, 394, 1771, 1855, 1948, 2089, 2167, 2308
Sau96I	GGNCC	1 cut(s)	979
SchI	GAGTC	7 cut(s)	392, 779, 803, 931, 1358, 2221, 2312
ScrFI	CCNGG	7 cut(s)	260, 801, 844, 854, 962, 1149, 1840
SduI	GDGCHC	4 cut(s)	414, 974, 1063, 1156
SexAI	ACCWGGT	1 cut(s)	852
SfaNI	GCATC	4 cut(s)	1797, 1819, 2011, 2357
SfcI	CTRYAG	1 cut(s)	2358
Sfr274I	CTCGAG	1 cut(s)	1719
Sfr303I	CCGCGG	1 cut(s)	643
SfuI	TTCGAA	1 cut(s)	2263
SgrBI	CCGCGG	1 cut(s)	643
SinI	GGWCC	1 cut(s)	979
SlaI	CTCGAG	1 cut(s)	1719
SmiMI	CAYNNNNRTG	2 cut(s)	145, 809
SmlI	CTYRAG	3 cut(s)	1719, 1775, 1863
SmoI	CTYRAG	3 cut(s)	1719, 1775, 1863
SphI	GCATGC	2 cut(s)	238, 754
SseBI	AGGCCT	1 cut(s)	280
SspI	AATATT	1 cut(s)	354
SspMI	CTAG	4 cut(s)	74, 1278, 1976, 2115
StuI	AGGCCT	1 cut(s)	280
StyD4I	CCNGG	7 cut(s)	258, 799, 842, 852, 960, 1147, 1838
StyI	CCWWGG	1 cut(s)	1504
TaaI	ACNGT	2 cut(s)	619, 1087
TaiI	ACGT	4 cut(s)	651, 882, 1130, 1696
TaqI	TCGA	5 cut(s)	950, 1720, 2263, 2269, 2371
TauI	GCSGC	7 cut(s)	642, 645, 656, 791, 1180, 1183, 1385
TfiI	GAWTC	4 cut(s)	203, 317, 1745, 2105
Tru1I	TTAA	2 cut(s)	1521, 2211
Tru9I	TTAA	2 cut(s)	1521, 2211
TscAI	CASTG	4 cut(s)	721, 974, 1306, 2362
TseFI	GTSAC	2 cut(s)	883, 2224
TseI	GCWGC	8 cut(s)	458, 708, 754, 893, 1263, 1304, 1307, 2024
Tsp45I	GTSAC	2 cut(s)	883, 2224
TspDTI	ATGAA	5 cut(s)	799, 887, 1261, 1632, 2358
TspGWI	ACGGA	4 cut(s)	349, 2185, 2288, 2326
TspRI	CASTG	4 cut(s)	721, 974, 1306, 2362
Tth111I	GACNNNGTC	2 cut(s)	617, 881
Van91I	CCANNNNNTGG	1 cut(s)	859
VneI	GTGCAC	1 cut(s)	970
VpaK11BI	GGWCC	1 cut(s)	979
XapI	RAATTY	3 cut(s)	179, 369, 1517
XceI	RCATGY	4 cut(s)	125, 238, 754, 2287
XhoI	CTCGAG	1 cut(s)	1719
XmiI	GTMKAC	4 cut(s)	621, 1101, 1450, 2364
XmnI	GAANNNNTTC	1 cut(s)	1394
XspI	CTAG	4 cut(s)	74, 1278, 1976, 2115
ZraI	GACGTC	1 cut(s)	649
Zsp2I	ATGCAT	4 cut(s)	148, 236, 1812, 1926

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.