pycom10g26470

Cysteine-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
Physical Location & Seq
Reverse (-)
27801819 .. 27802956
1138 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom10g26470.3

Sequence Viewer

Length: 756 bp
ATGGTATTGGTAGCCAAACTTCAACACCGAAATCTGGTTAGGCTGTTGGGATTCTGCTTGGAAGGCCAAGAAAAGATTCTTATTTATGAATTTGTACCCAACAAAAGCCTCGACTGTTTCCTATTTGACCCTGAGAAACAAGGGCAATTGGATTGGTCAAGACGTTTCAAGATTATTTCAGGAATTGCTCGAGGAATCATGTACCTACATGAAGATTCCCGACCTAGAATTATACATCGTGATCTCAAAGCCAGCAATATATTGTTAGATGGGGAGATGCATCCAAAAATATCTGATTTTGGCATGGCCAGGATATTTGGGGTTGATCAAACTCAAGCAAACACAAATAGAATTGTCGGTACATTTGGCAAGAAGAACAGTAACTTCTTTCAGAGCAATGCAGCTGAGGACCTCATGAGCCATGCTTGGAAGTTATGGAGAGATGGGGCACCTTTGGAATTGTTGGATCCGTGTCTAAGAGACTCTTATTCGAGGACTGAAGCAATCAGATGCATCCACATCGGCTTACTTTGTGTTCAGGTCGATCCAGCTGACAGGCCGACAATGCAATCGATAGTTCTCATGCTTAGTAGCTACTATGTTACATTGCCATCACCTCAACAACCGGCATTTTTCCTCCAAAGTAGAGCAATGGGAAACATGTCAGAGGCAACACTAGACTCCGCTCAGTCTATCAGCAAGTCATCTCTATCCGTTTATGAAGATCGATCTATCACTGAAATATACCCTAGATAA

Protein Analysis

252

Amino Acids

28.59

Weight (kDa)

7.67

Isoelectric Point (pI)

54.61

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000283)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G45860 AT4G05200 AT4G05200 AT4G11521 AT4G11530 AT4G23130 AT4G23130 AT4G23130 AT4G23140 AT4G23140 AT4G23150 AT4G23160 AT4G23170 AT4G23180 AT4G23180 AT4G23180 AT4G23230 AT4G23270 AT4G23270 AT4G23270 AT4G23280 AT4G23280 AT4G23280 AT4G23310 AT4G23310
fragaria_vesca FvH4_3g02772 FvH4_3g02772 FvH4_3g02773 FvH4_3g02773 FvH4_3g02774 FvH4_3g02800 FvH4_3g02820 FvH4_3g02820 FvH4_3g02830
malus_domestica MD00G1101900.v1.1 MD00G1102100.v1.1 MD00G1102200.v1.1 MD01G1098200.v1.1 MD05G1340000.v1.1 MD05G1340300.v1.1 MD07G1014100.v1.1 MD07G1014300.v1.1 MD07G1014400.v1.1 MD07G1014700.v1.1 MD10G1312900.v1.1 MD11G1022600.v1.1 MD11G1291500.v1.1 MD14G1207100.v1.1 MD16G1096600.v1.1
prunus_persica Prupe.4G027300_v2.0.a1 Prupe.4G027400_v2.0.a1 Prupe.4G027700_v2.0.a1 Prupe.4G027800_v2.0.a1
pyrus_communis pycom05g30960 pycom10g00940 pycom10g00950 pycom10g26430 pycom10g26450 pycom10g26460 pycom10g26470 pycom10g26480 pycom10g26490 pycom10g26500 pycom10g26510 pycom10g26570 pycom11g01820 pycom11g04000 pycom14g17130 pycom14g17140 pycom15g28820
rosa_chinensis RchiOBHm_Chr4g0408141 RchiOBHm_Chr5g0004211 RchiOBHm_Chr5g0004231 RchiOBHm_Chr5g0004241 RchiOBHm_Chr5g0004261
rosa_laevigata RLG00000008668 RLG00000008672 RLG00000031212 RLG00000031217
rosa_multiflora Rmu_co8162658.1_g000001 Rmu_co8336297.1_g000001 Rmu_sc0002073.1_g000001 Rmu_sc0004964.1_g000002 Rmu_sc0004964.1_g000003 Rmu_sc0004964.1_g000007 Rmu_sc0006006.1_g000007 Rmu_sc0007868.1_g000015 Rmu_sc0007868.1_g000016 Rmu_sc0007868.1_g000017 Rmu_sc0007868.1_g000021 Rmu_sc0007868.1_g000023 Rmu_sc0019654.1_g000002 Rmu_sc0038540.1_g000001
rosa_roxburghii Rroxscaffold_1G00071450 Rroxscaffold_1G00071460 Rroxscaffold_1G00071470 Rroxscaffold_1G00071560 Rroxscaffold_1G00071720 Rroxscaffold_1G00071770 Rroxscaffold_5G00352640
rosa_rugosa Rorug04G0083700 Rorug04G0410700 Rorug04G0410800 Rorug04G0410900
rosa_samantha Rh4BG145400 Rh4CG154900 Rh4DG141900 Rh5BG037500 Rh5BG037600 Rh5BG037700 Rh5CG041000 Rh5CG041100 Rh5CG041200 Rh5CG041300 Rh5CG041400 Rh5DG037100
rosa_wichuraiana Rw4G012130 Rw5G003450 Rw5G003460 Rw5G003470 Rw5G003480 Rw5G003640 Rw5G003660 Rw5G003670 Rw5G003680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 448
AccBSI CCGCTC 1 cut(s) 686
AciI CCGC 1 cut(s) 684
AclWI GGATC 3 cut(s) 461, 474, 539
AcoI YGGCCR 1 cut(s) 306
AcsI RAATTY 1 cut(s) 89
AcuI CTGAAG 1 cut(s) 519
AfaI GTAC 3 cut(s) 96, 203, 361
AfiI CCNNNNNNNGG 1 cut(s) 34
AflIII ACRYGT 1 cut(s) 660
AgsI TTSAA 2 cut(s) 23, 169
AjnI CCWGG 1 cut(s) 308
AjuI GAANNNNNNNTTGG 2 cut(s) 60, 92
AluBI AGCT 3 cut(s) 404, 551, 594
AluI AGCT 3 cut(s) 404, 551, 594
Alw26I GTCTC 1 cut(s) 474
AlwI GGATC 3 cut(s) 461, 474, 539
Ama87I CYCGRG 1 cut(s) 189
AoxI GGCC 3 cut(s) 64, 306, 557
ApeKI GCWGC 1 cut(s) 401
ApoI RAATTY 1 cut(s) 89
Asp700I GAANNNNTTC 1 cut(s) 75
AspS9I GGNCC 1 cut(s) 409
AsuHPI GGTGA 1 cut(s) 606
AvaI CYCGRG 1 cut(s) 189
AvaII GGWCC 1 cut(s) 409
BaeGI GKGCMC 1 cut(s) 451
BalI TGGCCA 1 cut(s) 308
BamHI GGATCC 1 cut(s) 466
BanI GGYRCC 1 cut(s) 448
BarI GAAGNNNNNNTAC 1 cut(s) 35
BbvCI CCTCAGC 1 cut(s) 405
BbvI GCAGC 1 cut(s) 413
BccI CCATC 3 cut(s) 263, 437, 619
BcgI CGANNNNNNTGC 2 cut(s) 502, 536
BciT130I CCWGG 1 cut(s) 310
BclI TGATCA 1 cut(s) 325
BcoDI GTCTC 1 cut(s) 474
BfaI CTAG 3 cut(s) 225, 677, 750
BisI GCNGC 1 cut(s) 402
BlsI GCNGC 1 cut(s) 403
Bme1390I CCNGG 1 cut(s) 310
Bme18I GGWCC 1 cut(s) 409
BmeT110I CYCGRG 1 cut(s) 189
BmgT120I GGNCC 1 cut(s) 409
BmiI GGNNCC 2 cut(s) 450, 468
BmrFI CCNGG 1 cut(s) 310
BmsI GCATC 4 cut(s) 267, 289, 500, 522
Bpu10I CCTNAGC 1 cut(s) 405
BpuEI CTTGAG 1 cut(s) 318
Bsa29I ATCGAT 2 cut(s) 572, 727
Bsc4I CCNNNNNNNGG 1 cut(s) 34
Bse118I RCCGGY 1 cut(s) 625
Bse3DI GCAATG 3 cut(s) 403, 605, 657
BseBI CCWGG 1 cut(s) 310
BseCI ATCGAT 2 cut(s) 572, 727
BseGI GGATG 2 cut(s) 280, 513
BseLI CCNNNNNNNGG 1 cut(s) 34
BseMI GCAATG 3 cut(s) 403, 605, 657
BseMII CTCAG 3 cut(s) 123, 396, 701
BseSI GKGCMC 1 cut(s) 451
BseXI GCAGC 1 cut(s) 413
BshFI GGCC 3 cut(s) 66, 308, 559
BshNI GGYRCC 1 cut(s) 448
BshVI ATCGAT 2 cut(s) 572, 727
BsiHKCI CYCGRG 1 cut(s) 189
BsiSI CCGG 1 cut(s) 626
BslI CCNNNNNNNGG 1 cut(s) 34
BsmAI GTCTC 1 cut(s) 474
BsnI GGCC 3 cut(s) 66, 308, 559
BsoBI CYCGRG 1 cut(s) 189
Bsp1286I GDGCHC 1 cut(s) 451
Bsp143I GATC 6 cut(s) 241, 325, 466, 544, 724, 728
BspACI CCGC 1 cut(s) 684
BspANI GGCC 3 cut(s) 66, 308, 559
BspCNI CTCAG 3 cut(s) 124, 397, 700
BspDI ATCGAT 2 cut(s) 572, 727
BspHI TCATGA 1 cut(s) 414
BspLI GGNNCC 2 cut(s) 450, 468
BspPI GGATC 3 cut(s) 461, 474, 539
BspT107I GGYRCC 1 cut(s) 448
BsrBI CCGCTC 1 cut(s) 686
BsrDI GCAATG 3 cut(s) 403, 605, 657
BsrFI RCCGGY 1 cut(s) 625
BssAI RCCGGY 1 cut(s) 625
BssMI GATC 6 cut(s) 241, 325, 466, 544, 724, 728
Bst2UI CCWGG 1 cut(s) 310
Bst4CI ACNGT 2 cut(s) 116, 380
BstC8I GCNNGC 1 cut(s) 253
BstDEI CTNAG 5 cut(s) 132, 405, 476, 587, 687
BstF5I GGATG 2 cut(s) 280, 513
BstKTI GATC 6 cut(s) 244, 328, 469, 547, 727, 731
BstMAI GTCTC 1 cut(s) 474
BstMBI GATC 6 cut(s) 241, 325, 466, 544, 724, 728
BstMWI GCNNNNNNNGC 2 cut(s) 63, 565
BstNI CCWGG 1 cut(s) 310
BstNSI RCATGY 1 cut(s) 664
BstSCI CCNGG 1 cut(s) 308
BstSLI GKGCMC 1 cut(s) 451
BstV1I GCAGC 1 cut(s) 413
BstX2I RGATCY 1 cut(s) 466
BstYI RGATCY 1 cut(s) 466
Bsu15I ATCGAT 2 cut(s) 572, 727
BsuRI GGCC 3 cut(s) 66, 308, 559
BsuTUI ATCGAT 2 cut(s) 572, 727
BtsCI GGATG 2 cut(s) 280, 513
BtsIMutI CAGTG 1 cut(s) 735
Cac8I GCNNGC 1 cut(s) 253
CciI TCATGA 1 cut(s) 414
Cfr10I RCCGGY 1 cut(s) 625
Cfr13I GGNCC 1 cut(s) 409
ClaI ATCGAT 2 cut(s) 572, 727
Csp6I GTAC 3 cut(s) 95, 202, 360
CviAII CATG 7 cut(s) 199, 209, 304, 415, 422, 583, 661
CviQI GTAC 3 cut(s) 95, 202, 360
DdeI CTNAG 5 cut(s) 132, 405, 476, 587, 687
DpnI GATC 6 cut(s) 243, 327, 468, 546, 726, 730
DpnII GATC 6 cut(s) 241, 325, 466, 544, 724, 728
EaeI YGGCCR 1 cut(s) 306
Eco47I GGWCC 1 cut(s) 409
Eco57I CTGAAG 1 cut(s) 519
Eco88I CYCGRG 1 cut(s) 189
EcoO109I RGGNCCY 1 cut(s) 409
EcoRII CCWGG 1 cut(s) 308
EcoT22I ATGCAT 2 cut(s) 282, 515
FaeI CATG 7 cut(s) 202, 212, 307, 418, 425, 586, 664
FalI AAGNNNNNCTT 2 cut(s) 469, 501
FatI CATG 7 cut(s) 198, 208, 303, 414, 421, 582, 660
FbaI TGATCA 1 cut(s) 325
Fnu4HI GCNGC 1 cut(s) 402
FokI GGATG 2 cut(s) 267, 500
Fsp4HI GCNGC 1 cut(s) 402
FspBI CTAG 3 cut(s) 225, 677, 750
GluI GCNGC 1 cut(s) 402
HaeIII GGCC 3 cut(s) 66, 308, 559
HapII CCGG 1 cut(s) 626
Hin1II CATG 7 cut(s) 202, 212, 307, 418, 425, 586, 664
HinfI GANTC 6 cut(s) 51, 76, 195, 215, 482, 680
HpaII CCGG 1 cut(s) 626
HphI GGTGA 1 cut(s) 606
Hpy188I TCNGA 4 cut(s) 295, 393, 509, 667
Hpy188III TCNNGA 6 cut(s) 159, 169, 180, 219, 239, 415
HpyAV CCTTC 1 cut(s) 56
HpyCH4III ACNGT 2 cut(s) 116, 380
HpyCH4IV ACGT 1 cut(s) 163
HpyCH4V TGCA 4 cut(s) 280, 401, 513, 568
HpyF10VI GCNNNNNNNGC 2 cut(s) 63, 565
HpyF3I CTNAG 5 cut(s) 132, 405, 476, 587, 687
HpySE526I ACGT 1 cut(s) 163
Hsp92II CATG 7 cut(s) 202, 212, 307, 418, 425, 586, 664
Ksp22I TGATCA 1 cut(s) 325
Kzo9I GATC 6 cut(s) 241, 325, 466, 544, 724, 728
Lsp1109I GCAGC 1 cut(s) 413
LweI GCATC 4 cut(s) 267, 289, 500, 522
MaeI CTAG 3 cut(s) 225, 677, 750
MaeII ACGT 1 cut(s) 163
MaeIII GTNAC 2 cut(s) 380, 601
MalI GATC 6 cut(s) 243, 327, 468, 546, 726, 730
MbiI CCGCTC 1 cut(s) 686
MboI GATC 6 cut(s) 241, 325, 466, 544, 724, 728
MboII GAAGA 3 cut(s) 224, 385, 734
MfeI CAATTG 1 cut(s) 146
MflI RGATCY 1 cut(s) 466
MhlI GDGCHC 1 cut(s) 451
MlsI TGGCCA 1 cut(s) 308
MluCI AATT 6 cut(s) 89, 146, 183, 228, 351, 458
MluNI TGGCCA 1 cut(s) 308
MlyI GAGTC 2 cut(s) 476, 674
MmeI TCCRAC 1 cut(s) 444
MnlI CCTC 8 cut(s) 119, 185, 400, 422, 486, 627, 647, 661
Mox20I TGGCCA 1 cut(s) 308
Mph1103I ATGCAT 2 cut(s) 282, 515
MroXI GAANNNNTTC 1 cut(s) 75
MscI TGGCCA 1 cut(s) 308
Msp20I TGGCCA 1 cut(s) 308
MspA1I CMGCKG 2 cut(s) 404, 551
MspI CCGG 1 cut(s) 626
MspR9I CCNGG 1 cut(s) 310
MunI CAATTG 1 cut(s) 146
MvaI CCWGG 1 cut(s) 310
MwoI GCNNNNNNNGC 2 cut(s) 63, 565
NdeII GATC 6 cut(s) 241, 325, 466, 544, 724, 728
NlaIII CATG 7 cut(s) 202, 212, 307, 418, 425, 586, 664
NlaIV GGNNCC 2 cut(s) 450, 468
NsiI ATGCAT 2 cut(s) 282, 515
NspI RCATGY 1 cut(s) 664
PaeR7I CTCGAG 1 cut(s) 189
PagI TCATGA 1 cut(s) 414
PciI ACATGT 1 cut(s) 660
PdmI GAANNNNTTC 1 cut(s) 75
PfeI GAWTC 4 cut(s) 51, 76, 195, 215
PkrI GCNGC 1 cut(s) 403
PleI GAGTC 2 cut(s) 476, 674
PpsI GAGTC 2 cut(s) 476, 674
PpuMI RGGWCCY 1 cut(s) 409
PscI ACATGT 1 cut(s) 660
Psp5II RGGWCCY 1 cut(s) 409
Psp6I CCWGG 1 cut(s) 308
PspGI CCWGG 1 cut(s) 308
PspN4I GGNNCC 2 cut(s) 450, 468
PspPI GGNCC 1 cut(s) 409
PspPPI RGGWCCY 1 cut(s) 409
PspXI VCTCGAGB 1 cut(s) 189
PsuI RGATCY 1 cut(s) 466
PvuII CAGCTG 2 cut(s) 404, 551
RsaI GTAC 3 cut(s) 96, 203, 361
RsaNI GTAC 3 cut(s) 95, 202, 360
SatI GCNGC 1 cut(s) 402
Sau3AI GATC 6 cut(s) 241, 325, 466, 544, 724, 728
Sau96I GGNCC 1 cut(s) 409
SchI GAGTC 2 cut(s) 476, 674
ScrFI CCNGG 1 cut(s) 310
SduI GDGCHC 1 cut(s) 451
SfaNI GCATC 4 cut(s) 267, 289, 500, 522
Sfr274I CTCGAG 1 cut(s) 189
SinI GGWCC 1 cut(s) 409
SlaI CTCGAG 1 cut(s) 189
SmlI CTYRAG 2 cut(s) 189, 333
SmoI CTYRAG 2 cut(s) 189, 333
Sse9I AATT 6 cut(s) 89, 146, 183, 228, 351, 458
SsiI CCGC 1 cut(s) 684
SspMI CTAG 3 cut(s) 225, 677, 750
StyD4I CCNGG 1 cut(s) 308
TaaI ACNGT 2 cut(s) 116, 380
TaiI ACGT 1 cut(s) 166
TaqI TCGA 6 cut(s) 111, 190, 491, 543, 572, 727
TasI AATT 6 cut(s) 89, 146, 183, 228, 351, 458
TfiI GAWTC 4 cut(s) 51, 76, 195, 215
TscAI CASTG 1 cut(s) 742
TseI GCWGC 1 cut(s) 401
TspDTI ATGAA 3 cut(s) 102, 225, 735
TspGWI ACGGA 2 cut(s) 459, 703
TspRI CASTG 1 cut(s) 742
VpaK11BI GGWCC 1 cut(s) 409
XapI RAATTY 1 cut(s) 89
XceI RCATGY 1 cut(s) 664
XhoI CTCGAG 1 cut(s) 189
XmnI GAANNNNTTC 1 cut(s) 75
XspI CTAG 3 cut(s) 225, 677, 750
Zsp2I ATGCAT 2 cut(s) 282, 515
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.