Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4D

Orthogroup ID

OG0000283

Physical Location & Seq

Genomic Coordinates Reverse (-)

28089759 .. 28093195

Gene Structure 3437 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4DG141900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2007 bp

ATGCCTTCTAATCTGTTCATGGCCCTTGTGGTGCTCCCCATTCTTGGCTTCCTTAGAGTTAGGGTTGAAGCTCAAGCACCAACTTACCGGTATCATATCTGTTCAAACACAACCAGTTTCACTCCCAACAGCACCTACCAGTCTAATCTTAATCTTCTCCTCTCTTCTCTCACATCCAACGCCACACGTGATATCGGATTCTACTACACCAAAGCGGGCGTGCAAAACTCAACTTCAGAAGTAGTTTACGGTTCTTTCCTATGCCGTGGAGATCTCACCCCTGACTTGTGCCAAGAATGTATTACTACTATAGCCAAAGATGGTGTCCAAAAGTACTGCCCCTTGGAAAAAATTTCAATAATATGGTACGATGGGTGCATGTTGCGCTACACAAATCAGTCTTTCTTGAACAGGTTGGACAAAGATCCTCAAATTTCCATGGTGGACATTTGGAATGTCACTGACCCTACCCGCTTTACGCAGCTGCTAGCAGAAACAATCAATGGCTTGGTGGCTCTGGCTTCAAATGCACCATCTGGTGCTAAAAAGTATGCAACGAAAGAAGCACCTTTCACAGGGTTTCAGCAGTTGAACAGCCTTGTTCAGTGCACACCAGACATATCAAGCACAAGTTGTGATACATGTCTTCGAGAAGCTATTGCGCAACTTTCAGGTTGTTGTACTGGAAAGGAAAGTGCTAGAATTTTATCTCCTAGTTGTAATGTTCGATACGAAGTTTATCCATTTTATACAACTGAAGCAGTCACACCTTCACCCCTCCCACAACCTCCGACTCTTCCTCCCCCACCTCCAGGAAAAGACCAAATCTCATCCTTAATCATAGTGGCCATTGTTGTTCCAATTTCCATAGTGCTTTTATTGGTAGGCTGCTTTTTTCTACGAAGAAAGGCAAGAAAAAAGTGTAATGCTTTACAAGAACAAAATGTGGGGAATAAAATTTCCACTGTGAAGTCATTGCAGTTTGATTTTGCTACAATTGAAGCAGCCACAAACCAGTTCTCTGTTAATAACAGATTAGGGGAAGGTGGCTTTGGAGAGGTTTACAAGGGAACCCTTCCTAAAGGGCGAGAAATAGCTGTGAAAAGGTTATCCAGAAGCTCCGGGCAAGGTGTCAAGGAGTTTGAAAATGAGGTGGTTTTGGTCGCCAAGCTTCAGCACAGAAATTTAGTAAGGCTACTGGGATTTTGCTCTGAAAGAGAAGAAAAGATACTTATCTATGAACTTGTGCAGAACAAAAGCCTTGACCACTTTTTATTCGACTCGGATATTCAAGTAAAGTTGGATTGGTCAAGCAGATACAAGATTATATGTGGGATTGCTAGAGGGATTCTCTATCTCCATCAAGATTCTCCGCTTAAAATCATACATCGCGATCTCAAAGCAAGCAACATATTGTTAGATGGAGAAATGAACCCAAAAATATCAGATTTTGGAATGGCAAGAATATTTGGAGTTGATCAAACTCAAGGAAGAACTAGAAGGATTGTTGGAACTTATGGTTACATGTCTCCAGAGTATGCAATGCATGGACGGTTCTCAGAGAAGTCTGATGTGTATAGTCTTGGTGTCTTAATCTTAGAGATTGTAACAGGCAAGAAAAACACTAAATTCCGTCAATCAGACCGCGGCGAAGATCTCTTAACCAATGCTGCTTGGAAACATTGGAGAGATGGGACAGCAGAAGAATTGTTGGATTCAAATCTGAGATGTTCTTATTCAAGAAATGAAGTAATCAGATGTATCTATATTGGTTTACTGTGTGTTCAGGAAGATCCAAAGGAGAGACCTACCATGCAAACCGTATTTCTCATGCTAAGCAGATACTCGTTCACTATGCCATTGCCTCAAAAGCCAGCGTTTTTCCTGTATAGTAAAGCAGAATTGAATCTGCCATCAGTAGCCACTGGATCATCAAATCAACCCACTAGCAGCTCAGTCTCATGTTCTGTTAATGAATCTTCGATTACTGAATTATTCCCTCGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009617 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0042742 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050896 GO:0051704 GO:0051707 GO:0071704 GO:0071944 GO:0098542 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase_Tyr Stress-antifung

Protein Analysis

668

Amino Acids

74.61

Weight (kDa)

8.67

Isoelectric Point (pI)

44.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Stress-antifung	PF01657	34 - 133	2.5e-24	Salt stress response/antifungal
Stress-antifung	PF01657	154 - 246	1.4e-10	Salt stress response/antifungal
Pkinase	PF00069	341 - 608	2e-45	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	342 - 608	3.3e-48	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0000283)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G45860 AT4G05200 AT4G05200 AT4G11521 AT4G11530 AT4G23130 AT4G23130 AT4G23130 AT4G23140 AT4G23140 AT4G23150 AT4G23160 AT4G23170 AT4G23180 AT4G23180 AT4G23180 AT4G23230 AT4G23270 AT4G23270 AT4G23270 AT4G23280 AT4G23280 AT4G23280 AT4G23310 AT4G23310
fragaria_vesca	FvH4_3g02772 FvH4_3g02772 FvH4_3g02773 FvH4_3g02773 FvH4_3g02774 FvH4_3g02800 FvH4_3g02820 FvH4_3g02820 FvH4_3g02830
malus_domestica	MD00G1101900.v1.1 MD00G1102100.v1.1 MD00G1102200.v1.1 MD01G1098200.v1.1 MD05G1340000.v1.1 MD05G1340300.v1.1 MD07G1014100.v1.1 MD07G1014300.v1.1 MD07G1014400.v1.1 MD07G1014700.v1.1 MD10G1312900.v1.1 MD11G1022600.v1.1 MD11G1291500.v1.1 MD14G1207100.v1.1 MD16G1096600.v1.1
prunus_persica	Prupe.4G027300_v2.0.a1 Prupe.4G027400_v2.0.a1 Prupe.4G027700_v2.0.a1 Prupe.4G027800_v2.0.a1
pyrus_communis	pycom05g30960 pycom10g00940 pycom10g00950 pycom10g26430 pycom10g26450 pycom10g26460 pycom10g26470 pycom10g26480 pycom10g26490 pycom10g26500 pycom10g26510 pycom10g26570 pycom11g01820 pycom11g04000 pycom14g17130 pycom14g17140 pycom15g28820
rosa_chinensis	RchiOBHm_Chr4g0408141 RchiOBHm_Chr5g0004211 RchiOBHm_Chr5g0004231 RchiOBHm_Chr5g0004241 RchiOBHm_Chr5g0004261
rosa_laevigata	RLG00000008668 RLG00000008672 RLG00000031212 RLG00000031217
rosa_multiflora	Rmu_co8162658.1_g000001 Rmu_co8336297.1_g000001 Rmu_sc0002073.1_g000001 Rmu_sc0004964.1_g000002 Rmu_sc0004964.1_g000003 Rmu_sc0004964.1_g000007 Rmu_sc0006006.1_g000007 Rmu_sc0007868.1_g000015 Rmu_sc0007868.1_g000016 Rmu_sc0007868.1_g000017 Rmu_sc0007868.1_g000021 Rmu_sc0007868.1_g000023 Rmu_sc0019654.1_g000002 Rmu_sc0038540.1_g000001
rosa_roxburghii	Rroxscaffold_1G00071450 Rroxscaffold_1G00071460 Rroxscaffold_1G00071470 Rroxscaffold_1G00071560 Rroxscaffold_1G00071720 Rroxscaffold_1G00071770 Rroxscaffold_5G00352640
rosa_rugosa	Rorug04G0083700 Rorug04G0410700 Rorug04G0410800 Rorug04G0410900
rosa_samantha	Rh4BG145400 Rh4CG154900 Rh4DG141900 Rh5BG037500 Rh5BG037600 Rh5BG037700 Rh5CG041000 Rh5CG041100 Rh5CG041200 Rh5CG041300 Rh5CG041400 Rh5DG037100
rosa_wichuraiana	Rw4G012130 Rw5G003450 Rw5G003460 Rw5G003470 Rw5G003480 Rw5G003640 Rw5G003660 Rw5G003670 Rw5G003680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	663
AccII	CGCG	2 cut(s)	1392, 1647
AciI	CCGC	5 cut(s)	215, 472, 1373, 1645, 1647
AclWI	GGATC	3 cut(s)	419, 1787, 1936
AcoI	YGGCCR	1 cut(s)	846
AcsI	RAATTY	6 cut(s)	351, 432, 702, 957, 1183, 1628
AcuI	CTGAAG	3 cut(s)	219, 777, 1157
AcvI	CACGTG	1 cut(s)	188
AfaI	GTAC	3 cut(s)	335, 368, 682
AfiI	CCNNNNNNNGG	3 cut(s)	44, 575, 812
AflIII	ACRYGT	3 cut(s)	185, 641, 1524
AgeI	ACCGGT	1 cut(s)	87
AjnI	CCWGG	1 cut(s)	811
AjuI	GAANNNNNNNTTGG	2 cut(s)	1035, 1067
AluBI	AGCT	7 cut(s)	71, 484, 656, 1097, 1119, 1171, 1953
AluI	AGCT	7 cut(s)	71, 484, 656, 1097, 1119, 1171, 1953
Alw21I	GWGCWC	2 cut(s)	36, 611
Alw26I	GTCTC	3 cut(s)	1533, 1798, 1963
Alw44I	GTGCAC	1 cut(s)	607
AlwI	GGATC	3 cut(s)	419, 1787, 1936
AoxI	GGCC	2 cut(s)	21, 846
ApaLI	GTGCAC	1 cut(s)	607
ApeKI	GCWGC	6 cut(s)	481, 484, 888, 1004, 1670, 1950
ApoI	RAATTY	6 cut(s)	351, 432, 702, 957, 1183, 1628
ArsI	GACNNNNNNTTYG	2 cut(s)	309, 341
AsiGI	ACCGGT	1 cut(s)	87
AspLEI	GCGC	2 cut(s)	387, 664
AspS9I	GGNCC	1 cut(s)	22
AsuC2I	CCSGG	1 cut(s)	1123
AsuHPI	GGTGA	2 cut(s)	268, 765
AsuNHI	GCTAGC	1 cut(s)	487
BaeGI	GKGCMC	1 cut(s)	611
BalI	TGGCCA	1 cut(s)	848
BarI	GAAGNNNNNNTAC	2 cut(s)	1212, 1244
BbrPI	CACGTG	1 cut(s)	188
BbsI	GAAGAC	1 cut(s)	638
Bbv12I	GWGCWC	2 cut(s)	36, 611
BbvI	GCAGC	6 cut(s)	471, 493, 875, 1016, 1657, 1962
BccI	CCATC	7 cut(s)	314, 365, 541, 1368, 1415, 1685, 1921
BceAI	ACGGC	1 cut(s)	249
BciT130I	CCWGG	1 cut(s)	813
BclI	TGATCA	1 cut(s)	1477
BcnI	CCSGG	1 cut(s)	1123
BcoDI	GTCTC	3 cut(s)	1533, 1798, 1963
BfaI	CTAG	6 cut(s)	488, 699, 714, 1341, 1497, 1947
BfmI	CTRYAG	1 cut(s)	309
BglII	AGATCT	2 cut(s)	271, 1654
BisI	GCNGC	7 cut(s)	482, 485, 889, 1005, 1648, 1671, 1951
BlpI	GCTNAGC	1 cut(s)	1835
BlsI	GCNGC	7 cut(s)	483, 486, 890, 1006, 1649, 1672, 1952
BmcAI	AGTACT	1 cut(s)	335
Bme1390I	CCNGG	2 cut(s)	813, 1123
BmgT120I	GGNCC	1 cut(s)	22
BmiI	GGNNCC	1 cut(s)	1072
BmrFI	CCNGG	2 cut(s)	813, 1123
BmrI	ACTGGG	1 cut(s)	1208
BmtI	GCTAGC	1 cut(s)	491
BmuI	ACTGGG	1 cut(s)	1208
BpiI	GAAGAC	1 cut(s)	638
BplI	GAGNNNNNCTC	2 cut(s)	1335, 1367
BpmI	CTGGAG	2 cut(s)	795, 1515
Bpu1102I	GCTNAGC	1 cut(s)	1835
BpuEI	CTTGAG	2 cut(s)	57, 1470
BpuMI	CCSGG	1 cut(s)	1123
BsaAI	YACGTR	1 cut(s)	188
BsaBI	GATNNNNATC	2 cut(s)	1232, 1719
BsaI	GGTCTC	1 cut(s)	1798
BsaJI	CCNNGG	4 cut(s)	265, 342, 438, 1645
BsaWI	WCCGGW	1 cut(s)	87
BsaXI	ACNNNNNCTCC	2 cut(s)	784, 814
Bsc4I	CCNNNNNNNGG	3 cut(s)	44, 575, 812
Bse118I	RCCGGY	1 cut(s)	87
Bse1I	ACTGG	6 cut(s)	114, 139, 688, 1015, 1203, 1930
Bse3DI	GCAATG	3 cut(s)	974, 1548, 1859
Bse8I	GATNNNNATC	2 cut(s)	1232, 1719
BseBI	CCWGG	1 cut(s)	813
BseDI	CCNNGG	4 cut(s)	265, 342, 438, 1645
BseGI	GGATG	2 cut(s)	173, 830
BseJI	GATNNNNATC	2 cut(s)	1232, 1719
BseLI	CCNNNNNNNGG	3 cut(s)	44, 575, 812
BseMI	GCAATG	3 cut(s)	974, 1548, 1859
BseMII	CTCAG	3 cut(s)	1572, 1715, 1968
BseNI	ACTGG	6 cut(s)	114, 139, 688, 1015, 1203, 1930
BseRI	GAGGAG	1 cut(s)	149
BseSI	GKGCMC	1 cut(s)	611
BseXI	GCAGC	6 cut(s)	471, 493, 875, 1016, 1657, 1962
BsgI	GTGCAG	1 cut(s)	1268
Bsh1236I	CGCG	2 cut(s)	1392, 1647
BshFI	GGCC	2 cut(s)	23, 848
BshTI	ACCGGT	1 cut(s)	87
BsiHKAI	GWGCWC	2 cut(s)	36, 611
BsiSI	CCGG	2 cut(s)	88, 1122
BslFI	GGGAC	1 cut(s)	1708
BslI	CCNNNNNNNGG	3 cut(s)	44, 575, 812
BsmAI	GTCTC	3 cut(s)	1533, 1798, 1963
BsmFI	GGGAC	1 cut(s)	1708
BsnI	GGCC	2 cut(s)	23, 848
Bso31I	GGTCTC	1 cut(s)	1798
Bsp1286I	GDGCHC	2 cut(s)	36, 611
Bsp143I	GATC	7 cut(s)	271, 424, 1393, 1477, 1654, 1792, 1928
Bsp1720I	GCTNAGC	1 cut(s)	1835
Bsp19I	CCATGG	1 cut(s)	438
Bsp68I	TCGCGA	1 cut(s)	1392
BspACI	CCGC	5 cut(s)	215, 472, 1373, 1645, 1647
BspANI	GGCC	2 cut(s)	23, 848
BspCNI	CTCAG	3 cut(s)	1571, 1716, 1967
BspFNI	CGCG	2 cut(s)	1392, 1647
BspLI	GGNNCC	1 cut(s)	1072
BspOI	GCTAGC	1 cut(s)	491
BspPI	GGATC	3 cut(s)	419, 1787, 1936
BspTNI	GGTCTC	1 cut(s)	1798
BsrDI	GCAATG	3 cut(s)	974, 1548, 1859
BsrFI	RCCGGY	1 cut(s)	87
BsrI	ACTGG	6 cut(s)	114, 139, 688, 1015, 1203, 1930
BssAI	RCCGGY	1 cut(s)	87
BssECI	CCNNGG	4 cut(s)	265, 342, 438, 1645
BssMI	GATC	7 cut(s)	271, 424, 1393, 1477, 1654, 1792, 1928
BssT1I	CCWWGG	2 cut(s)	342, 438
Bst2UI	CCWGG	1 cut(s)	813
Bst4CI	ACNGT	5 cut(s)	251, 967, 1554, 1779, 1822
Bst6I	CTCTTC	2 cut(s)	169, 801
BstBAI	YACGTR	1 cut(s)	188
BstC8I	GCNNGC	5 cut(s)	217, 221, 489, 1405, 1875
BstDEI	CTNAG	6 cut(s)	53, 1558, 1597, 1724, 1835, 1954
BstDSI	CCRYGG	3 cut(s)	265, 438, 1645
BstENI	CCTNNNNNAGG	1 cut(s)	573
BstF5I	GGATG	2 cut(s)	173, 830
BstFNI	CGCG	2 cut(s)	1392, 1647
BstHHI	GCGC	2 cut(s)	387, 664
BstKTI	GATC	7 cut(s)	274, 427, 1396, 1480, 1657, 1795, 1931
BstMAI	GTCTC	3 cut(s)	1533, 1798, 1963
BstMBI	GATC	7 cut(s)	271, 424, 1393, 1477, 1654, 1792, 1928
BstMWI	GCNNNNNNNGC	3 cut(s)	384, 527, 1870
BstNI	CCWGG	1 cut(s)	813
BstNSI	RCATGY	3 cut(s)	382, 645, 1528
BstSCI	CCNGG	2 cut(s)	811, 1121
BstSFI	CTRYAG	1 cut(s)	309
BstSLI	GKGCMC	1 cut(s)	611
BstUI	CGCG	2 cut(s)	1392, 1647
BstV1I	GCAGC	6 cut(s)	471, 493, 875, 1016, 1657, 1962
BstV2I	GAAGAC	1 cut(s)	638
BstX2I	RGATCY	4 cut(s)	271, 424, 1654, 1792
BstYI	RGATCY	4 cut(s)	271, 424, 1654, 1792
BsuRI	GGCC	2 cut(s)	23, 848
BtgI	CCRYGG	3 cut(s)	265, 438, 1645
BtgZI	GCGATG	1 cut(s)	1373
BtsCI	GGATG	2 cut(s)	173, 830
BtsIMutI	CAGTG	4 cut(s)	459, 611, 963, 1923
BtuMI	TCGCGA	1 cut(s)	1392
Cac8I	GCNNGC	5 cut(s)	217, 221, 489, 1405, 1875
CfoI	GCGC	2 cut(s)	387, 664
Cfr10I	RCCGGY	1 cut(s)	87
Cfr13I	GGNCC	1 cut(s)	22
Cfr42I	CCGCGG	1 cut(s)	1648
Csp6I	GTAC	3 cut(s)	334, 367, 681
CspAI	ACCGGT	1 cut(s)	87
CviAII	CATG	9 cut(s)	19, 379, 439, 642, 1525, 1547, 1813, 1831, 1962
CviQI	GTAC	3 cut(s)	334, 367, 681
DdeI	CTNAG	6 cut(s)	53, 1558, 1597, 1724, 1835, 1954
DpnI	GATC	7 cut(s)	273, 426, 1395, 1479, 1656, 1794, 1930
DpnII	GATC	7 cut(s)	271, 424, 1393, 1477, 1654, 1792, 1928
EaeI	YGGCCR	1 cut(s)	846
Eam1104I	CTCTTC	2 cut(s)	169, 801
EarI	CTCTTC	2 cut(s)	169, 801
Eco130I	CCWWGG	2 cut(s)	342, 438
Eco31I	GGTCTC	1 cut(s)	1798
Eco32I	GATATC	1 cut(s)	193
Eco57I	CTGAAG	3 cut(s)	219, 777, 1157
Eco72I	CACGTG	1 cut(s)	188
EcoNI	CCTNNNNNAGG	1 cut(s)	573
EcoRII	CCWGG	1 cut(s)	811
EcoRV	GATATC	1 cut(s)	193
EcoT14I	CCWWGG	2 cut(s)	342, 438
EcoT22I	ATGCAT	1 cut(s)	1548
ErhI	CCWWGG	2 cut(s)	342, 438
FaeI	CATG	9 cut(s)	22, 382, 442, 645, 1528, 1550, 1816, 1834, 1965
FaqI	GGGAC	1 cut(s)	1708
FatI	CATG	9 cut(s)	18, 378, 438, 641, 1524, 1546, 1812, 1830, 1961
FauI	CCCGC	2 cut(s)	208, 479
FbaI	TGATCA	1 cut(s)	1477
Fnu4HI	GCNGC	7 cut(s)	482, 485, 889, 1005, 1648, 1671, 1951
FokI	GGATG	2 cut(s)	160, 817
Fsp4HI	GCNGC	7 cut(s)	482, 485, 889, 1005, 1648, 1671, 1951
FspBI	CTAG	6 cut(s)	488, 699, 714, 1341, 1497, 1947
FspI	TGCGCA	1 cut(s)	663
GlaI	GCGC	2 cut(s)	386, 663
GluI	GCNGC	7 cut(s)	482, 485, 889, 1005, 1648, 1671, 1951
GsuI	CTGGAG	2 cut(s)	795, 1515
HaeIII	GGCC	2 cut(s)	23, 848
HapII	CCGG	2 cut(s)	88, 1122
HhaI	GCGC	2 cut(s)	387, 664
Hin1II	CATG	9 cut(s)	22, 382, 442, 645, 1528, 1550, 1816, 1834, 1965
Hin6I	GCGC	2 cut(s)	385, 662
HinP1I	GCGC	2 cut(s)	385, 662
HindIII	AAGCTT	1 cut(s)	1169
HinfI	GANTC	8 cut(s)	198, 793, 1280, 1348, 1367, 1715, 1906, 1976
HpaII	CCGG	2 cut(s)	88, 1122
HphI	GGTGA	2 cut(s)	268, 765
Hpy166II	GTNNAC	6 cut(s)	247, 445, 609, 1063, 1775, 1851
Hpy188III	TCNNGA	8 cut(s)	406, 650, 1113, 1364, 1391, 1532, 1740, 1787
Hpy8I	GTNNAC	6 cut(s)	247, 445, 609, 1063, 1775, 1851
HpyAV	CCTTC	5 cut(s)	15, 780, 1037, 1085, 1494
HpyCH4III	ACNGT	5 cut(s)	251, 967, 1554, 1779, 1822
HpyCH4IV	ACGT	1 cut(s)	187
HpyF10VI	GCNNNNNNNGC	3 cut(s)	384, 527, 1870
HpyF3I	CTNAG	6 cut(s)	53, 1558, 1597, 1724, 1835, 1954
HpySE526I	ACGT	1 cut(s)	187
Hsp92II	CATG	9 cut(s)	22, 382, 442, 645, 1528, 1550, 1816, 1834, 1965
HspAI	GCGC	2 cut(s)	385, 662
Ksp22I	TGATCA	1 cut(s)	1477
KspI	CCGCGG	1 cut(s)	1648
Kzo9I	GATC	7 cut(s)	271, 424, 1393, 1477, 1654, 1792, 1928
LmnI	GCTCC	2 cut(s)	39, 1124
Lsp1109I	GCAGC	6 cut(s)	471, 493, 875, 1016, 1657, 1962
MaeI	CTAG	6 cut(s)	488, 699, 714, 1341, 1497, 1947
MaeII	ACGT	1 cut(s)	187
MaeIII	GTNAC	4 cut(s)	457, 763, 1520, 1606
MalI	GATC	7 cut(s)	273, 426, 1395, 1479, 1656, 1794, 1930
MboI	GATC	7 cut(s)	271, 424, 1393, 1477, 1654, 1792, 1928
MfeI	CAATTG	1 cut(s)	996
MflI	RGATCY	4 cut(s)	271, 424, 1654, 1792
MhlI	GDGCHC	2 cut(s)	36, 611
MlsI	TGGCCA	1 cut(s)	848
MluNI	TGGCCA	1 cut(s)	848
MlyI	GAGTC	2 cut(s)	787, 1274
MmeI	TCCRAC	6 cut(s)	201, 396, 815, 1281, 1489, 1692
Mox20I	TGGCCA	1 cut(s)	848
Mph1103I	ATGCAT	1 cut(s)	1548
MscI	TGGCCA	1 cut(s)	848
MseI	TTAA	7 cut(s)	150, 836, 1026, 1377, 1592, 1661, 1971
Msp20I	TGGCCA	1 cut(s)	848
MspA1I	CMGCKG	2 cut(s)	484, 1647
MspI	CCGG	2 cut(s)	88, 1122
MspR9I	CCNGG	2 cut(s)	813, 1123
MunI	CAATTG	1 cut(s)	996
MvaI	CCWGG	1 cut(s)	813
MvnI	CGCG	2 cut(s)	1392, 1647
MwoI	GCNNNNNNNGC	3 cut(s)	384, 527, 1870
NciI	CCSGG	1 cut(s)	1123
NcoI	CCATGG	1 cut(s)	438
NdeII	GATC	7 cut(s)	271, 424, 1393, 1477, 1654, 1792, 1928
NheI	GCTAGC	1 cut(s)	487
NlaIII	CATG	9 cut(s)	22, 382, 442, 645, 1528, 1550, 1816, 1834, 1965
NlaIV	GGNNCC	1 cut(s)	1072
NmuCI	GTSAC	2 cut(s)	457, 763
NruI	TCGCGA	1 cut(s)	1392
NsbI	TGCGCA	1 cut(s)	663
NsiI	ATGCAT	1 cut(s)	1548
NspI	RCATGY	3 cut(s)	382, 645, 1528
PciI	ACATGT	2 cut(s)	641, 1524
PfeI	GAWTC	6 cut(s)	198, 1348, 1367, 1715, 1906, 1976
PfoI	TCCNGGA	1 cut(s)	811
PinAI	ACCGGT	1 cut(s)	87
PkrI	GCNGC	7 cut(s)	483, 486, 890, 1006, 1649, 1672, 1952
PleI	GAGTC	2 cut(s)	787, 1274
PmaCI	CACGTG	1 cut(s)	188
PmlI	CACGTG	1 cut(s)	188
PpsI	GAGTC	2 cut(s)	787, 1274
Ppu21I	YACGTR	1 cut(s)	188
PscI	ACATGT	2 cut(s)	641, 1524
Psp6I	CCWGG	1 cut(s)	811
PspCI	CACGTG	1 cut(s)	188
PspGI	CCWGG	1 cut(s)	811
PspN4I	GGNNCC	1 cut(s)	1072
PspPI	GGNCC	1 cut(s)	22
PsuI	RGATCY	4 cut(s)	271, 424, 1654, 1792
PvuII	CAGCTG	1 cut(s)	484
RruI	TCGCGA	1 cut(s)	1392
RsaI	GTAC	3 cut(s)	335, 368, 682
RsaNI	GTAC	3 cut(s)	334, 367, 681
SacII	CCGCGG	1 cut(s)	1648
SaqAI	TTAA	7 cut(s)	150, 836, 1026, 1377, 1592, 1661, 1971
SatI	GCNGC	7 cut(s)	482, 485, 889, 1005, 1648, 1671, 1951
Sau3AI	GATC	7 cut(s)	271, 424, 1393, 1477, 1654, 1792, 1928
Sau96I	GGNCC	1 cut(s)	22
ScaI	AGTACT	1 cut(s)	335
SchI	GAGTC	2 cut(s)	787, 1274
ScrFI	CCNGG	2 cut(s)	813, 1123
SduI	GDGCHC	2 cut(s)	36, 611
SfcI	CTRYAG	1 cut(s)	309
Sfr303I	CCGCGG	1 cut(s)	1648
SgrBI	CCGCGG	1 cut(s)	1648
SmlI	CTYRAG	2 cut(s)	72, 1485
SmoI	CTYRAG	2 cut(s)	72, 1485
SsiI	CCGC	5 cut(s)	215, 472, 1373, 1645, 1647
SspI	AATATT	1 cut(s)	1467
SspMI	CTAG	6 cut(s)	488, 699, 714, 1341, 1497, 1947
StyD4I	CCNGG	2 cut(s)	811, 1121
StyI	CCWWGG	2 cut(s)	342, 438
TaaI	ACNGT	5 cut(s)	251, 967, 1554, 1779, 1822
TaiI	ACGT	1 cut(s)	190
TaqI	TCGA	5 cut(s)	649, 727, 1278, 1982, 2002
TatI	WGTACW	2 cut(s)	333, 680
TauI	GCSGC	1 cut(s)	1650
TfiI	GAWTC	6 cut(s)	198, 1348, 1367, 1715, 1906, 1976
Tru1I	TTAA	7 cut(s)	150, 836, 1026, 1377, 1592, 1661, 1971
Tru9I	TTAA	7 cut(s)	150, 836, 1026, 1377, 1592, 1661, 1971
TscAI	CASTG	4 cut(s)	466, 611, 970, 1930
TseFI	GTSAC	2 cut(s)	457, 763
TseI	GCWGC	6 cut(s)	481, 484, 888, 1004, 1670, 1950
Tsp45I	GTSAC	2 cut(s)	457, 763
TspDTI	ATGAA	5 cut(s)	7, 1254, 1445, 1761, 1989
TspGWI	ACGGA	1 cut(s)	1622
TspRI	CASTG	4 cut(s)	466, 611, 970, 1930
VneI	GTGCAC	1 cut(s)	607
XagI	CCTNNNNNAGG	1 cut(s)	573
XapI	RAATTY	6 cut(s)	351, 432, 702, 957, 1183, 1628
XceI	RCATGY	3 cut(s)	382, 645, 1528
XspI	CTAG	6 cut(s)	488, 699, 714, 1341, 1497, 1947
ZrmI	AGTACT	1 cut(s)	335
Zsp2I	ATGCAT	1 cut(s)	1548

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.