Prupe.4G027800_v2.0.a1

Cysteine-rich receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0000283
Physical Location & Seq
Forward (+)
1287553 .. 1290899
3347 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G027800.1

Sequence Viewer

Length: 2016 bp
ATGCCTTCCTTCAATCTCAATGTGTTGATGACCCTTGTGCTTGGCTTGCTTAGCCTCAGCTGTTTGAGTGAAGCTGATTATCGCTCCCACGTCTGTTCTAACACAACCCGTTTCACTCCCAACAGCACCTACGAATTCAATCTTAATCTGCTGCTCTCTTCACTCACCTCCAATGCCACCCGTGAACTTGGTTTCTACAACACCACCGCCGGCTCCCAAGACCCCAACACTGCAGTTTACGGCTCCTTTCTATGCCGTGCCGATCTCACATCAGATGCATGCCAAGATTGTGTGGCTACTGCAGCCAGAGACGCGGTCCAAGAGTACTGCCCCTTAAGAAAAGTCACCACAATTTGGTACGACGATTGCATGTTACGCTACTCAAACGTGTCTTTTTTTGGCCATATGGATCAACACCCAAAAGTTTATTTGTTTAGCTCGGGAAACGTTACTGAACCAATCCGGTTTAATCAGTTGCTGTCGAAAACAATCACTGAATTGGTGCCTGTGGCAGTAAATGCGGCCCCCGGTGCTAAAAAGTTTGCTACAAAAGAAGTGAACTTTACAGGGTTTCAGGACTTGTACAGCCTTGTGCAGTGCACGCCAGACCTGTCAGGCACCGATTGTGATCGGTGTCTTCGAGGAGCTATTGCGCTTCTTCCGGCTTGTTGTAATGGGAAGCCAGGGGCAAGAGTTGTGTGTCCTAGTTGTAATGTTAGATATGAATTCTATCCATTTTATACTAGTGTTGCTGCCCCTCCTTCACCACCAACACCACTGCTTCTTCCTCCTCCACCTCCAGCTTCAGTTTCAAGATCTCAAGGAAATGATGACCAAATCTCATCTTTACCCATAGTGGCCATTGTGGTTCCAATTGCCATATTGCTCTTCTTGGTAGGCTGCTGTTTCTTCAGAAGAAGAGCAAGGAAAAAGTACAATGCTAAACAACAACAAAATGTGGGGAGCGAAATTAGTAGTGTGGAGTCATTGCAGTTTGATTTGCATACAATTGAAGCAGCCACAGAAAATTTCTCTGATCAGAACAGGTTAGGGGGAGGTGGCTTTGGTGAGGTTTACAAGGGTACACTCCGTGATGGGCTACAAATAGCTGTGAAGAGGTTATCTAGAGGCTCTGGGCAAGGTGCCGAAGAGTTTAAGAATGAGGTTGTTTTGGTAGCTAAGCTTGAGCACAGAAATTTAGTGAGGCTACTGGGATTTTGCTCTGAAGGAGAAGAAAAGATACTTGTTTACGAACTTGTGGAGAACAAAAGCCTTGACCACTTTCTATTCGGCCCTGAGAACCAAGTAAAATTGGATTGGTCAAGCAGATACAAGATTATTGGCGGGATTGCTCGAGGGCTTCTCTATCTCCATCAAGATTCTCGGCTTAAAATCATACATCGTGATCTTAAAGCAGGCAATGTATTGTTAGATGGGAACATGAACCCAAAAATTGCAGATTTTGGCATGGCAAGAATATTTGGTGTTGACCAAACTCAAGGAAGCACAAGAAGGATTGTGGGAACATATGGTTACATGCCTCCAGAATATGCAATGTATGGACAGTTCTCTGTGAAGTCCGACGTGTACAGTCTTGGTGTCTTGATCTTAGAGATTGTAACTGGCAAGAAGAACACTAATTTCTATAACTCGGACGGTGGCGAAGACCTCTTGAGCTATGCTTGGAGGCATTGGAGGGATGGGACATCCTTAGAATTATTGGATCCAAATCTAAGAGATTCTTATGAAAAAACAGAAGTAATTAGATGTGTCCATATTGGGTTACTCTGTGTTCAGGAAAATCCAGATGAGAGACCCACAATGCAATCCATTGTTCTCATGCTAAGCAGTGACTCTGTTACCATGGCATTACCTCAAAAGCCTGCATTTTTCATGCATAGTAGAACAGAGCTGAACATGCCATCATTAACCACTGAATCATCTGATCCAACTGCTAGCAACTTGTTGCCATTTTCTGTTAACGAAGAATCAATTACTGAATTATACCCCCGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase Pkinase_Tyr Stress-antifung

Protein Analysis

672

Amino Acids

74.41

Weight (kDa)

5.96

Isoelectric Point (pI)

43.69

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000283)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G45860 AT4G05200 AT4G05200 AT4G11521 AT4G11530 AT4G23130 AT4G23130 AT4G23130 AT4G23140 AT4G23140 AT4G23150 AT4G23160 AT4G23170 AT4G23180 AT4G23180 AT4G23180 AT4G23230 AT4G23270 AT4G23270 AT4G23270 AT4G23280 AT4G23280 AT4G23280 AT4G23310 AT4G23310
fragaria_vesca FvH4_3g02772 FvH4_3g02772 FvH4_3g02773 FvH4_3g02773 FvH4_3g02774 FvH4_3g02800 FvH4_3g02820 FvH4_3g02820 FvH4_3g02830
malus_domestica MD00G1101900.v1.1 MD00G1102100.v1.1 MD00G1102200.v1.1 MD01G1098200.v1.1 MD05G1340000.v1.1 MD05G1340300.v1.1 MD07G1014100.v1.1 MD07G1014300.v1.1 MD07G1014400.v1.1 MD07G1014700.v1.1 MD10G1312900.v1.1 MD11G1022600.v1.1 MD11G1291500.v1.1 MD14G1207100.v1.1 MD16G1096600.v1.1
prunus_persica Prupe.4G027300_v2.0.a1 Prupe.4G027400_v2.0.a1 Prupe.4G027700_v2.0.a1 Prupe.4G027800_v2.0.a1
pyrus_communis pycom05g30960 pycom10g00940 pycom10g00950 pycom10g26430 pycom10g26450 pycom10g26460 pycom10g26470 pycom10g26480 pycom10g26490 pycom10g26500 pycom10g26510 pycom10g26570 pycom11g01820 pycom11g04000 pycom14g17130 pycom14g17140 pycom15g28820
rosa_chinensis RchiOBHm_Chr4g0408141 RchiOBHm_Chr5g0004211 RchiOBHm_Chr5g0004231 RchiOBHm_Chr5g0004241 RchiOBHm_Chr5g0004261
rosa_laevigata RLG00000008668 RLG00000008672 RLG00000031212 RLG00000031217
rosa_multiflora Rmu_co8162658.1_g000001 Rmu_co8336297.1_g000001 Rmu_sc0002073.1_g000001 Rmu_sc0004964.1_g000002 Rmu_sc0004964.1_g000003 Rmu_sc0004964.1_g000007 Rmu_sc0006006.1_g000007 Rmu_sc0007868.1_g000015 Rmu_sc0007868.1_g000016 Rmu_sc0007868.1_g000017 Rmu_sc0007868.1_g000021 Rmu_sc0007868.1_g000023 Rmu_sc0019654.1_g000002 Rmu_sc0038540.1_g000001
rosa_roxburghii Rroxscaffold_1G00071450 Rroxscaffold_1G00071460 Rroxscaffold_1G00071470 Rroxscaffold_1G00071560 Rroxscaffold_1G00071720 Rroxscaffold_1G00071770 Rroxscaffold_5G00352640
rosa_rugosa Rorug04G0083700 Rorug04G0410700 Rorug04G0410800 Rorug04G0410900
rosa_samantha Rh4BG145400 Rh4CG154900 Rh4DG141900 Rh5BG037500 Rh5BG037600 Rh5BG037700 Rh5CG041000 Rh5CG041100 Rh5CG041200 Rh5CG041300 Rh5CG041400 Rh5DG037100
rosa_wichuraiana Rw4G012130 Rw5G003450 Rw5G003460 Rw5G003470 Rw5G003480 Rw5G003640 Rw5G003660 Rw5G003670 Rw5G003680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 3 cut(s) 502, 617, 1142
AccB7I CCANNNNNTGG 1 cut(s) 354
AccII CGCG 1 cut(s) 314
AciI CCGC 4 cut(s) 207, 314, 521, 1344
AclI AACGTT 1 cut(s) 447
AclWI GGATC 4 cut(s) 417, 1718, 1731, 1940
AcoI YGGCCR 2 cut(s) 400, 858
AcsI RAATTY 4 cut(s) 134, 725, 1027, 1195
AcuI CTGAAG 3 cut(s) 789, 895, 1245
AdeI CACNNNGTG 1 cut(s) 1091
AfaI GTAC 6 cut(s) 326, 359, 584, 935, 1084, 1589
AfiI CCNNNNNNNGG 1 cut(s) 354
AflII CTTAAG 1 cut(s) 334
AflIII ACRYGT 2 cut(s) 387, 1584
AgsI TTSAA 4 cut(s) 13, 139, 813, 1013
AhlI ACTAGT 1 cut(s) 743
AjiI CACGTC 2 cut(s) 91, 1585
AjnI CCWGG 1 cut(s) 682
Alw21I GWGCWC 2 cut(s) 602, 1191
Alw26I GTCTC 2 cut(s) 303, 1807
Alw44I GTGCAC 1 cut(s) 598
AlwI GGATC 4 cut(s) 417, 1718, 1731, 1940
AlwNI CAGNNNCTG 1 cut(s) 478
Ama87I CYCGRG 2 cut(s) 439, 1353
AoxI GGCC 4 cut(s) 400, 522, 858, 1291
ApaLI GTGCAC 1 cut(s) 598
ApeKI GCWGC 5 cut(s) 151, 302, 752, 900, 1016
ApoI RAATTY 4 cut(s) 134, 725, 1027, 1195
AspLEI GCGC 1 cut(s) 655
AspS9I GGNCC 3 cut(s) 316, 523, 1292
AsuC2I CCSGG 1 cut(s) 528
AsuHPI GGTGA 4 cut(s) 157, 337, 756, 1079
AsuNHI GCTAGC 1 cut(s) 1955
AvaI CYCGRG 2 cut(s) 439, 1353
AvaII GGWCC 1 cut(s) 316
BaeGI GKGCMC 1 cut(s) 602
BalI TGGCCA 2 cut(s) 402, 860
BamHI GGATCC 1 cut(s) 1723
BanI GGYRCC 3 cut(s) 502, 617, 1142
BarI GAAGNNNNNNTAC 2 cut(s) 1224, 1256
BbsI GAAGAC 2 cut(s) 629, 1671
Bbv12I GWGCWC 2 cut(s) 602, 1191
BbvCI CCTCAGC 1 cut(s) 56
BbvI GCAGC 5 cut(s) 138, 314, 739, 887, 1028
BccI CCATC 5 cut(s) 1088, 1380, 1427, 1694, 1930
BceAI ACGGC 2 cut(s) 240, 256
BciT130I CCWGG 1 cut(s) 684
BclI TGATCA 1 cut(s) 1036
BcnI CCSGG 1 cut(s) 528
BcoDI GTCTC 2 cut(s) 303, 1807
BcuI ACTAGT 1 cut(s) 743
BfaI CTAG 4 cut(s) 705, 744, 1125, 1956
BfmI CTRYAG 2 cut(s) 231, 300
BfrI CTTAAG 1 cut(s) 334
BglII AGATCT 1 cut(s) 815
BisI GCNGC 6 cut(s) 152, 303, 522, 753, 901, 1017
BlpI GCTNAGC 3 cut(s) 50, 1179, 1844
BlsI GCNGC 6 cut(s) 153, 304, 523, 754, 902, 1018
BmcAI AGTACT 1 cut(s) 326
Bme1390I CCNGG 2 cut(s) 528, 684
Bme18I GGWCC 1 cut(s) 316
BmeT110I CYCGRG 2 cut(s) 439, 1353
BmgBI CACGTC 2 cut(s) 91, 1585
BmgT120I GGNCC 3 cut(s) 316, 523, 1292
BmiI GGNNCC 8 cut(s) 214, 244, 504, 525, 619, 870, 1144, 1725
BmrFI CCNGG 2 cut(s) 528, 684
BmrI ACTGGG 1 cut(s) 1220
BmsI GCATC 1 cut(s) 265
BmtI GCTAGC 1 cut(s) 1959
BmuI ACTGGG 1 cut(s) 1220
BpiI GAAGAC 2 cut(s) 629, 1671
BplI GAGNNNNNCTC 2 cut(s) 1347, 1379
BpmI CTGGAG 2 cut(s) 783, 1527
Bpu10I CCTNAGC 1 cut(s) 56
Bpu1102I GCTNAGC 3 cut(s) 50, 1179, 1844
BpuEI CTTGAG 4 cut(s) 804, 1205, 1482, 1693
BpuMI CCSGG 1 cut(s) 528
BsaBI GATNNNNATC 2 cut(s) 627, 1728
BsaI GGTCTC 1 cut(s) 1807
BsaJI CCNNGG 3 cut(s) 526, 683, 1863
BsaWI WCCGGW 1 cut(s) 462
Bsc4I CCNNNNNNNGG 1 cut(s) 354
Bse118I RCCGGY 1 cut(s) 209
Bse1I ACTGG 2 cut(s) 1215, 1627
Bse3DI GCAATG 3 cut(s) 986, 1426, 1560
Bse8I GATNNNNATC 2 cut(s) 627, 1728
BseBI CCWGG 1 cut(s) 684
BseDI CCNNGG 3 cut(s) 526, 683, 1863
BseGI GGATG 2 cut(s) 1705, 1706
BseJI GATNNNNATC 2 cut(s) 627, 1728
BseLI CCNNNNNNNGG 1 cut(s) 354
BseMI GCAATG 3 cut(s) 986, 1426, 1560
BseMII CTCAG 2 cut(s) 70, 1287
BseNI ACTGG 2 cut(s) 1215, 1627
BseRI GAGGAG 2 cut(s) 657, 780
BseSI GKGCMC 1 cut(s) 602
BseXI GCAGC 5 cut(s) 138, 314, 739, 887, 1028
BsgI GTGCAG 1 cut(s) 614
Bsh1236I CGCG 1 cut(s) 314
BshFI GGCC 4 cut(s) 402, 524, 860, 1293
BshNI GGYRCC 3 cut(s) 502, 617, 1142
BsiHKAI GWGCWC 2 cut(s) 602, 1191
BsiHKCI CYCGRG 2 cut(s) 439, 1353
BsiSI CCGG 4 cut(s) 210, 463, 528, 662
BslFI GGGAC 1 cut(s) 1717
BslI CCNNNNNNNGG 1 cut(s) 354
BsmAI GTCTC 2 cut(s) 303, 1807
BsmBI CGTCTC 1 cut(s) 303
BsmFI GGGAC 1 cut(s) 1717
BsnI GGCC 4 cut(s) 402, 524, 860, 1293
Bso31I GGTCTC 1 cut(s) 1807
BsoBI CYCGRG 2 cut(s) 439, 1353
Bsp1286I GDGCHC 2 cut(s) 602, 1191
Bsp1407I TGTACA 2 cut(s) 582, 1587
Bsp143I GATC 9 cut(s) 262, 409, 628, 815, 1036, 1405, 1605, 1723, 1945
Bsp1720I GCTNAGC 3 cut(s) 50, 1179, 1844
Bsp19I CCATGG 1 cut(s) 1863
BspACI CCGC 4 cut(s) 207, 314, 521, 1344
BspANI GGCC 4 cut(s) 402, 524, 860, 1293
BspCNI CTCAG 2 cut(s) 69, 1288
BspFNI CGCG 1 cut(s) 314
BspLI GGNNCC 8 cut(s) 214, 244, 504, 525, 619, 870, 1144, 1725
BspMAI CTGCAG 2 cut(s) 235, 304
BspOI GCTAGC 1 cut(s) 1959
BspPI GGATC 4 cut(s) 417, 1718, 1731, 1940
BspQI GCTCTTC 2 cut(s) 893, 913
BspT107I GGYRCC 3 cut(s) 502, 617, 1142
BspTI CTTAAG 1 cut(s) 334
BspTNI GGTCTC 1 cut(s) 1807
BsrDI GCAATG 3 cut(s) 986, 1426, 1560
BsrFI RCCGGY 1 cut(s) 209
BsrGI TGTACA 2 cut(s) 582, 1587
BsrI ACTGG 2 cut(s) 1215, 1627
BssAI RCCGGY 1 cut(s) 209
BssECI CCNNGG 3 cut(s) 526, 683, 1863
BssMI GATC 9 cut(s) 262, 409, 628, 815, 1036, 1405, 1605, 1723, 1945
BssT1I CCWWGG 1 cut(s) 1863
Bst2UI CCWGG 1 cut(s) 684
Bst4CI ACNGT 3 cut(s) 1566, 1592, 1658
Bst6I CTCTTC 5 cut(s) 163, 893, 913, 1109, 1143
BstAFI CTTAAG 1 cut(s) 334
BstAPI GCANNNNNTGC 1 cut(s) 518
BstAUI TGTACA 2 cut(s) 582, 1587
BstC8I GCNNGC 7 cut(s) 47, 211, 280, 602, 1417, 1884, 1957
BstDEI CTNAG 8 cut(s) 50, 56, 1179, 1296, 1609, 1711, 1733, 1844
BstDSI CCRYGG 1 cut(s) 1863
BstF5I GGATG 2 cut(s) 1705, 1706
BstFNI CGCG 1 cut(s) 314
BstHHI GCGC 1 cut(s) 655
BstKTI GATC 9 cut(s) 265, 412, 631, 818, 1039, 1408, 1608, 1726, 1948
BstMAI GTCTC 2 cut(s) 303, 1807
BstMBI GATC 9 cut(s) 262, 409, 628, 815, 1036, 1405, 1605, 1723, 1945
BstMWI GCNNNNNNNGC 9 cut(s) 46, 51, 302, 311, 375, 518, 530, 601, 1918
BstNI CCWGG 1 cut(s) 684
BstNSI RCATGY 4 cut(s) 282, 373, 1540, 1921
BstSCI CCNGG 2 cut(s) 526, 682
BstSFI CTRYAG 2 cut(s) 231, 300
BstSLI GKGCMC 1 cut(s) 602
BstUI CGCG 1 cut(s) 314
BstV1I GCAGC 5 cut(s) 138, 314, 739, 887, 1028
BstV2I GAAGAC 2 cut(s) 629, 1671
BstX2I RGATCY 2 cut(s) 815, 1723
BstYI RGATCY 2 cut(s) 815, 1723
BsuRI GGCC 4 cut(s) 402, 524, 860, 1293
BtgI CCRYGG 1 cut(s) 1863
BtrI CACGTC 2 cut(s) 91, 1585
BtsCI GGATG 2 cut(s) 1705, 1706
BtsI GCAGTG 4 cut(s) 228, 602, 776, 1855
BtsIMutI CAGTG 6 cut(s) 228, 492, 602, 776, 1855, 1932
Cac8I GCNNGC 7 cut(s) 47, 211, 280, 602, 1417, 1884, 1957
CaiI CAGNNNCTG 1 cut(s) 478
CfoI GCGC 1 cut(s) 655
Cfr10I RCCGGY 1 cut(s) 209
Cfr13I GGNCC 3 cut(s) 316, 523, 1292
CseI GACGC 1 cut(s) 320
Csp6I GTAC 6 cut(s) 325, 358, 583, 934, 1083, 1588
CviAII CATG 9 cut(s) 279, 370, 1441, 1468, 1537, 1840, 1864, 1894, 1918
CviQI GTAC 6 cut(s) 325, 358, 583, 934, 1083, 1588
DdeI CTNAG 8 cut(s) 50, 56, 1179, 1296, 1609, 1711, 1733, 1844
DpnI GATC 9 cut(s) 264, 411, 630, 817, 1038, 1407, 1607, 1725, 1947
DpnII GATC 9 cut(s) 262, 409, 628, 815, 1036, 1405, 1605, 1723, 1945
DraIII CACNNNGTG 1 cut(s) 1091
EaeI YGGCCR 2 cut(s) 400, 858
Eam1104I CTCTTC 5 cut(s) 163, 893, 913, 1109, 1143
EarI CTCTTC 5 cut(s) 163, 893, 913, 1109, 1143
Eco130I CCWWGG 1 cut(s) 1863
Eco31I GGTCTC 1 cut(s) 1807
Eco47I GGWCC 1 cut(s) 316
Eco57I CTGAAG 3 cut(s) 789, 895, 1245
Eco88I CYCGRG 2 cut(s) 439, 1353
EcoRI GAATTC 2 cut(s) 134, 725
EcoRII CCWGG 1 cut(s) 682
EcoT14I CCWWGG 1 cut(s) 1863
EcoT22I ATGCAT 2 cut(s) 280, 1899
ErhI CCWWGG 1 cut(s) 1863
Esp3I CGTCTC 1 cut(s) 303
FaeI CATG 9 cut(s) 282, 373, 1444, 1471, 1540, 1843, 1867, 1897, 1921
FalI AAGNNNNNCTT 2 cut(s) 1726, 1758
FaqI GGGAC 1 cut(s) 1717
FatI CATG 9 cut(s) 278, 369, 1440, 1467, 1536, 1839, 1863, 1893, 1917
FauI CCCGC 1 cut(s) 1337
FauNDI CATATG 2 cut(s) 405, 1528
FbaI TGATCA 1 cut(s) 1036
Fnu4HI GCNGC 6 cut(s) 152, 303, 522, 753, 901, 1017
FokI GGATG 2 cut(s) 1693, 1712
Fsp4HI GCNGC 6 cut(s) 152, 303, 522, 753, 901, 1017
FspBI CTAG 4 cut(s) 705, 744, 1125, 1956
GlaI GCGC 1 cut(s) 654
GluI GCNGC 6 cut(s) 152, 303, 522, 753, 901, 1017
GsuI CTGGAG 2 cut(s) 783, 1527
HaeIII GGCC 4 cut(s) 402, 524, 860, 1293
HapII CCGG 4 cut(s) 210, 463, 528, 662
HgaI GACGC 1 cut(s) 320
HhaI GCGC 1 cut(s) 655
Hin1II CATG 9 cut(s) 282, 373, 1444, 1471, 1540, 1843, 1867, 1897, 1921
Hin6I GCGC 1 cut(s) 653
HinP1I GCGC 1 cut(s) 653
HincII GTYRAC 2 cut(s) 1489, 1981
HindII GTYRAC 2 cut(s) 1489, 1981
HindIII AAGCTT 1 cut(s) 1181
HinfI GANTC 6 cut(s) 983, 1379, 1739, 1853, 1937, 1988
HpaI GTTAAC 1 cut(s) 1981
HpaII CCGG 4 cut(s) 210, 463, 528, 662
HphI GGTGA 4 cut(s) 157, 337, 756, 1079
Hpy188I TCNGA 8 cut(s) 274, 914, 1036, 1041, 1225, 1582, 1654, 1945
Hpy99I CGWCG 2 cut(s) 365, 1586
HpyAV CCTTC 5 cut(s) 15, 19, 771, 1220, 1506
HpyCH4III ACNGT 3 cut(s) 1566, 1592, 1658
HpyCH4IV ACGT 4 cut(s) 90, 387, 447, 1584
HpyF10VI GCNNNNNNNGC 9 cut(s) 46, 51, 302, 311, 375, 518, 530, 601, 1918
HpyF3I CTNAG 8 cut(s) 50, 56, 1179, 1296, 1609, 1711, 1733, 1844
HpySE526I ACGT 4 cut(s) 90, 387, 447, 1584
Hsp92II CATG 9 cut(s) 282, 373, 1444, 1471, 1540, 1843, 1867, 1897, 1921
HspAI GCGC 1 cut(s) 653
KroI GCCGGC 1 cut(s) 209
KroNI GCCGGC 1 cut(s) 211
Ksp22I TGATCA 1 cut(s) 1036
KspAI GTTAAC 1 cut(s) 1981
Kzo9I GATC 9 cut(s) 262, 409, 628, 815, 1036, 1405, 1605, 1723, 1945
LguI GCTCTTC 2 cut(s) 893, 913
LmnI GCTCC 5 cut(s) 89, 218, 248, 644, 963
Lsp1109I GCAGC 5 cut(s) 138, 314, 739, 887, 1028
LweI GCATC 1 cut(s) 265
MaeI CTAG 4 cut(s) 705, 744, 1125, 1956
MaeII ACGT 4 cut(s) 90, 387, 447, 1584
MaeIII GTNAC 8 cut(s) 343, 372, 448, 1532, 1618, 1782, 1850, 1858
MalI GATC 9 cut(s) 264, 411, 630, 817, 1038, 1407, 1607, 1725, 1947
MboI GATC 9 cut(s) 262, 409, 628, 815, 1036, 1405, 1605, 1723, 1945
MfeI CAATTG 2 cut(s) 873, 1008
MflI RGATCY 2 cut(s) 815, 1723
MhlI GDGCHC 2 cut(s) 602, 1191
MlsI TGGCCA 2 cut(s) 402, 860
MluNI TGGCCA 2 cut(s) 402, 860
MlyI GAGTC 2 cut(s) 992, 1847
MmeI TCCRAC 2 cut(s) 1605, 1973
Mox20I TGGCCA 2 cut(s) 402, 860
Mph1103I ATGCAT 2 cut(s) 280, 1899
MroNI GCCGGC 1 cut(s) 209
MscI TGGCCA 2 cut(s) 402, 860
MseI TTAA 8 cut(s) 144, 335, 468, 1155, 1389, 1410, 1928, 1980
Msp20I TGGCCA 2 cut(s) 402, 860
MspA1I CMGCKG 1 cut(s) 60
MspCI CTTAAG 1 cut(s) 334
MspI CCGG 4 cut(s) 210, 463, 528, 662
MspR9I CCNGG 2 cut(s) 528, 684
MunI CAATTG 2 cut(s) 873, 1008
MvaI CCWGG 1 cut(s) 684
MvnI CGCG 1 cut(s) 314
MwoI GCNNNNNNNGC 9 cut(s) 46, 51, 302, 311, 375, 518, 530, 601, 1918
NaeI GCCGGC 1 cut(s) 211
NciI CCSGG 1 cut(s) 528
NcoI CCATGG 1 cut(s) 1863
NdeI CATATG 2 cut(s) 405, 1528
NdeII GATC 9 cut(s) 262, 409, 628, 815, 1036, 1405, 1605, 1723, 1945
NgoMIV GCCGGC 1 cut(s) 209
NheI GCTAGC 1 cut(s) 1955
NlaIII CATG 9 cut(s) 282, 373, 1444, 1471, 1540, 1843, 1867, 1897, 1921
NlaIV GGNNCC 8 cut(s) 214, 244, 504, 525, 619, 870, 1144, 1725
NmeAIII GCCGAG 1 cut(s) 1363
NmuCI GTSAC 2 cut(s) 343, 1850
NsiI ATGCAT 2 cut(s) 280, 1899
NspI RCATGY 4 cut(s) 282, 373, 1540, 1921
PaeI GCATGC 1 cut(s) 282
PaeR7I CTCGAG 1 cut(s) 1353
PciSI GCTCTTC 2 cut(s) 893, 913
PcsI WCGNNNNNNNCGW 1 cut(s) 637
PdiI GCCGGC 1 cut(s) 211
PfeI GAWTC 4 cut(s) 1379, 1739, 1937, 1988
PflFI GACNNNGTC 1 cut(s) 314
PflMI CCANNNNNTGG 1 cut(s) 354
PkrI GCNGC 6 cut(s) 153, 304, 523, 754, 902, 1018
PleI GAGTC 2 cut(s) 991, 1847
PpsI GAGTC 2 cut(s) 991, 1847
Psp1406I AACGTT 1 cut(s) 447
Psp6I CCWGG 1 cut(s) 682
PspGI CCWGG 1 cut(s) 682
PspN4I GGNNCC 8 cut(s) 214, 244, 504, 525, 619, 870, 1144, 1725
PspPI GGNCC 3 cut(s) 316, 523, 1292
PspXI VCTCGAGB 1 cut(s) 1353
PsrI GAACNNNNNNTAC 2 cut(s) 1550, 1582
PstI CTGCAG 2 cut(s) 235, 304
PstNI CAGNNNCTG 1 cut(s) 478
PsuI RGATCY 2 cut(s) 815, 1723
PsyI GACNNNGTC 1 cut(s) 314
PvuII CAGCTG 1 cut(s) 60
RsaI GTAC 6 cut(s) 326, 359, 584, 935, 1084, 1589
RsaNI GTAC 6 cut(s) 325, 358, 583, 934, 1083, 1588
SapI GCTCTTC 2 cut(s) 893, 913
SaqAI TTAA 8 cut(s) 144, 335, 468, 1155, 1389, 1410, 1928, 1980
SatI GCNGC 6 cut(s) 152, 303, 522, 753, 901, 1017
Sau3AI GATC 9 cut(s) 262, 409, 628, 815, 1036, 1405, 1605, 1723, 1945
Sau96I GGNCC 3 cut(s) 316, 523, 1292
ScaI AGTACT 1 cut(s) 326
SchI GAGTC 2 cut(s) 992, 1847
ScrFI CCNGG 2 cut(s) 528, 684
SduI GDGCHC 2 cut(s) 602, 1191
SfaNI GCATC 1 cut(s) 265
SfcI CTRYAG 2 cut(s) 231, 300
Sfr274I CTCGAG 1 cut(s) 1353
SinI GGWCC 1 cut(s) 316
SlaI CTCGAG 1 cut(s) 1353
SmlI CTYRAG 6 cut(s) 334, 819, 1184, 1353, 1497, 1672
SmoI CTYRAG 6 cut(s) 334, 819, 1184, 1353, 1497, 1672
SpeI ACTAGT 1 cut(s) 743
SphI GCATGC 1 cut(s) 282
SsiI CCGC 4 cut(s) 207, 314, 521, 1344
SspI AATATT 1 cut(s) 1479
SspMI CTAG 4 cut(s) 705, 744, 1125, 1956
StyD4I CCNGG 2 cut(s) 526, 682
StyI CCWWGG 1 cut(s) 1863
TaaI ACNGT 3 cut(s) 1566, 1592, 1658
TaiI ACGT 4 cut(s) 93, 390, 450, 1587
TaqI TCGA 3 cut(s) 482, 640, 1354
TatI WGTACW 4 cut(s) 324, 582, 933, 1587
TauI GCSGC 1 cut(s) 524
TfiI GAWTC 4 cut(s) 1379, 1739, 1937, 1988
Tru1I TTAA 8 cut(s) 144, 335, 468, 1155, 1389, 1410, 1928, 1980
Tru9I TTAA 8 cut(s) 144, 335, 468, 1155, 1389, 1410, 1928, 1980
TscAI CASTG 6 cut(s) 235, 499, 602, 783, 1855, 1939
TseFI GTSAC 2 cut(s) 343, 1850
TseI GCWGC 5 cut(s) 151, 302, 752, 900, 1016
Tsp45I GTSAC 2 cut(s) 343, 1850
TspDTI ATGAA 4 cut(s) 738, 1457, 1761, 1882
TspGWI ACGGA 1 cut(s) 1079
TspRI CASTG 6 cut(s) 235, 499, 602, 783, 1855, 1939
Tth111I GACNNNGTC 1 cut(s) 314
Van91I CCANNNNNTGG 1 cut(s) 354
Vha464I CTTAAG 1 cut(s) 334
VneI GTGCAC 1 cut(s) 598
VpaK11BI GGWCC 1 cut(s) 316
XapI RAATTY 4 cut(s) 134, 725, 1027, 1195
XbaI TCTAGA 1 cut(s) 1124
XceI RCATGY 4 cut(s) 282, 373, 1540, 1921
XhoI CTCGAG 1 cut(s) 1353
XspI CTAG 4 cut(s) 705, 744, 1125, 1956
ZrmI AGTACT 1 cut(s) 326
Zsp2I ATGCAT 2 cut(s) 280, 1899
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.