Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0000283

Physical Location & Seq

Genomic Coordinates Forward (+)

1475940 .. 1479008

Gene Structure 3069 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g02820.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2013 bp

ATGTCTTCTAATCTGTTCATTGCCTTTGTAGTGCTCCCCATTCTTGGCTTCCTTGGCGTTTGCATTGAAGCTCAAGCACCAACTTACCGGTCTCATTTCTGTTTAAACACAACCAGTTTCACTCCCAACAGCTCCTACCAGTCTAATCTCAATCTCCTCCTTTCTTCTCTCACATCCAACGCCACACGAGATATTGGATTCTACTACACTAGAGCTGGCGTGCTAAACTCCACCACAGAAGTAGTTTACGGTTCTTTCCTATGCCGTGGAGATCTCACCCCTGAGTTGTGCCAAGAATGTGTTGCTACTATAGCCAAAGATGGTGTCCAAACGTTCTGTCCCTTGGGAAAGATTGCGATAATATGGTACGACGAGTGCATGCTGCGCTACACAAACCAGTCCTTCTTGAACAGAATGGACGAAGCTCCTCGAGTTTCCATGTGGAACATTGGGAATATCTCTGACCCTACCCGCTTTATGCAGCTGCTTGGAGAAACAGTCAATGGTTTGGTGGATCTGGCCTCAAATGCACCGTCCGGTGCTAAAAAGTATGCGACGAAAGAAGCAGATTTCACAGGGTTTCAGAAGTTGTACAGCCTTGTGCAGTGCACACCGGACCTATCAAGCACAAGTTGTGAAACATGTCTTCGAGGAGCTGTGGCGCAACTTCCAGGTTGTTGTAATGGAAAGCAAGGTGGTAACGTTTTATATCCTAGTTGTAATGTCCGATATGAAGTTTATCCATTTTATACAACTGAAGCAGCCACACCTTCACCACCGCCACGGCCTCTGATTCTTCCTCCCCCACCTCCAGGAAATGACCAAATCTCATCCTTAATCATAGTGGCCATTGTTGTTCCAATTGCCATAGTGCTTTTCTTGGTAGGCTGCTTTTTGCTAAGAAGAAAGACAAGAAAAGAGTATGATGCTTTGCAAGGACAAAATGGGGGCAGTGAAATTAGTGAAATTACTACTGTGGAGTCATTGCAGTTTGATTTTGCTACAATTGAAGCAGCCACAAACCAGTTCTCTGTTAGTAACAGATTAGGGGAAGGTGGCTTTGGAGAGGTTTACAAGGGAACACTTCCTAATGGACAAGAAGTAGCAGTGAAGAGGTTATCTAGAAGCTCCGGGCAAGGTGTCAAGGAGTTTAAGAATGAGGTAGTTTTGGTGGCCAAACTTCAGCACAGAAATTTAGTGAGGCTACTGGGATTTTGCTCTGAAGGAGAAGAAAAGATACTTATCTATGAATTTGTGCAGAACAAAAGCCTTGACCACTTTTTATTCGACTCAGACATTCAAGTGAAGTTGGATTGGTCAACCAGATACAAGATTATAGGCGGGATTGCTAGAGGGATTCTCTATCTCCATCAAGATTCTCGGCTTAAAATCATACATCGCGATCTCAAAGCAAGCAACATATTGTTAGATGGAGAAATGAACCCAAAAGTATCAGATTTTGGGATGGCAAGAATATTTGGAGTTGATCAAACTCAAGGATGCACCAGAATGATTGTCGGAACTTATGGTTATATGTCTCCAGAGTATGCAATGCATGGACAGTTCTCAGTGAAGTCTGATGTGTATAGTCTTGGTGTCTTAATCTTAGAGATTGTAACAGGCAAGAAAAACACTAGTTTCTATCAATCAGACCGTGGTGAAGATCTCTTGACCTATGCTTGGAAACATTGGAGGGATGGGACGCCTGAAGAATTGTTGGATTCAAGTCTGAGAGGTTCTTATGCAAGAAATGAAGTAACCAGATGTATCCATATTGGTTTACTGTGTGTTCAGGAAGATCCAGAGGAGAGACCTACAATGCAAACCATAGTTCTCATGCTAAGCAGTTACTCTATCAGTATGCCATTGCCTGAAAAGCCAGCGTTTTTCCTGCATAGTAAAGGAGATTTGAACATGCCATCAGTAGCCACGGGAGCATCAGATAAACCCACTAGCAGCTCAGTCTCATATTCTGTTAATGAAGTTTCAATTACTGAATTATTCCCTCGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009617 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0042742 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050896 GO:0051704 GO:0051707 GO:0071704 GO:0071944 GO:0098542 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase_Tyr Stress-antifung

Protein Analysis

671

Amino Acids

74.09

Weight (kDa)

5.85

Isoelectric Point (pI)

44.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Stress-antifung	PF01657	26 - 120	2.9e-12	Salt stress response/antifungal
Pkinase	PF00069	218 - 485	7.8e-46	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	219 - 486	1.1e-48	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000283)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G45860 AT4G05200 AT4G05200 AT4G11521 AT4G11530 AT4G23130 AT4G23130 AT4G23130 AT4G23140 AT4G23140 AT4G23150 AT4G23160 AT4G23170 AT4G23180 AT4G23180 AT4G23180 AT4G23230 AT4G23270 AT4G23270 AT4G23270 AT4G23280 AT4G23280 AT4G23280 AT4G23310 AT4G23310
fragaria_vesca	FvH4_3g02772 FvH4_3g02772 FvH4_3g02773 FvH4_3g02773 FvH4_3g02774 FvH4_3g02800 FvH4_3g02820 FvH4_3g02820 FvH4_3g02830
malus_domestica	MD00G1101900.v1.1 MD00G1102100.v1.1 MD00G1102200.v1.1 MD01G1098200.v1.1 MD05G1340000.v1.1 MD05G1340300.v1.1 MD07G1014100.v1.1 MD07G1014300.v1.1 MD07G1014400.v1.1 MD07G1014700.v1.1 MD10G1312900.v1.1 MD11G1022600.v1.1 MD11G1291500.v1.1 MD14G1207100.v1.1 MD16G1096600.v1.1
prunus_persica	Prupe.4G027300_v2.0.a1 Prupe.4G027400_v2.0.a1 Prupe.4G027700_v2.0.a1 Prupe.4G027800_v2.0.a1
pyrus_communis	pycom05g30960 pycom10g00940 pycom10g00950 pycom10g26430 pycom10g26450 pycom10g26460 pycom10g26470 pycom10g26480 pycom10g26490 pycom10g26500 pycom10g26510 pycom10g26570 pycom11g01820 pycom11g04000 pycom14g17130 pycom14g17140 pycom15g28820
rosa_chinensis	RchiOBHm_Chr4g0408141 RchiOBHm_Chr5g0004211 RchiOBHm_Chr5g0004231 RchiOBHm_Chr5g0004241 RchiOBHm_Chr5g0004261
rosa_laevigata	RLG00000008668 RLG00000008672 RLG00000031212 RLG00000031217
rosa_multiflora	Rmu_co8162658.1_g000001 Rmu_co8336297.1_g000001 Rmu_sc0002073.1_g000001 Rmu_sc0004964.1_g000002 Rmu_sc0004964.1_g000003 Rmu_sc0004964.1_g000007 Rmu_sc0006006.1_g000007 Rmu_sc0007868.1_g000015 Rmu_sc0007868.1_g000016 Rmu_sc0007868.1_g000017 Rmu_sc0007868.1_g000021 Rmu_sc0007868.1_g000023 Rmu_sc0019654.1_g000002 Rmu_sc0038540.1_g000001
rosa_roxburghii	Rroxscaffold_1G00071450 Rroxscaffold_1G00071460 Rroxscaffold_1G00071470 Rroxscaffold_1G00071560 Rroxscaffold_1G00071720 Rroxscaffold_1G00071770 Rroxscaffold_5G00352640
rosa_rugosa	Rorug04G0083700 Rorug04G0410700 Rorug04G0410800 Rorug04G0410900
rosa_samantha	Rh4BG145400 Rh4CG154900 Rh4DG141900 Rh5BG037500 Rh5BG037600 Rh5BG037700 Rh5CG041000 Rh5CG041100 Rh5CG041200 Rh5CG041300 Rh5CG041400 Rh5DG037100
rosa_wichuraiana	Rw4G012130 Rw5G003450 Rw5G003460 Rw5G003470 Rw5G003480 Rw5G003640 Rw5G003660 Rw5G003670 Rw5G003680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	1 cut(s)	1401
AciI	CCGC	3 cut(s)	472, 779, 1341
AclI	AACGTT	2 cut(s)	332, 702
AclWI	GGATC	2 cut(s)	522, 1793
AcoI	YGGCCR	2 cut(s)	846, 1173
AcsI	RAATTY	2 cut(s)	1192, 1250
AcuI	CTGAAG	4 cut(s)	777, 1166, 1242, 1728
AcyI	GRCGYC	1 cut(s)	1703
AfaI	GTAC	2 cut(s)	368, 593
AfiI	CCNNNNNNNGG	3 cut(s)	44, 812, 1680
AflIII	ACRYGT	1 cut(s)	641
AgeI	ACCGGT	1 cut(s)	87
AgsI	TTSAA	7 cut(s)	68, 409, 1010, 1301, 1725, 1912, 1989
AhlI	ACTAGT	1 cut(s)	1634
AjnI	CCWGG	2 cut(s)	670, 811
AjuI	GAANNNNNNNTTGG	2 cut(s)	1044, 1076
AluBI	AGCT	8 cut(s)	71, 132, 215, 425, 484, 656, 1128, 1959
AluI	AGCT	8 cut(s)	71, 132, 215, 425, 484, 656, 1128, 1959
Alw21I	GWGCWC	2 cut(s)	36, 611
Alw26I	GTCTC	4 cut(s)	96, 1542, 1804, 1969
Alw44I	GTGCAC	1 cut(s)	607
AlwI	GGATC	2 cut(s)	522, 1793
Ama87I	CYCGRG	1 cut(s)	429
AoxI	GGCC	4 cut(s)	519, 785, 846, 1173
ApaLI	GTGCAC	1 cut(s)	607
ApeKI	GCWGC	7 cut(s)	382, 481, 484, 761, 888, 1013, 1956
ApoI	RAATTY	2 cut(s)	1192, 1250
ArsI	GACNNNNNNTTYG	6 cut(s)	309, 322, 341, 354, 518, 550
AsiGI	ACCGGT	1 cut(s)	87
AspLEI	GCGC	2 cut(s)	387, 664
AspS9I	GGNCC	1 cut(s)	616
AsuC2I	CCSGG	1 cut(s)	1132
AsuHPI	GGTGA	3 cut(s)	268, 765, 1670
AvaI	CYCGRG	1 cut(s)	429
AvaII	GGWCC	1 cut(s)	616
BaeGI	GKGCMC	1 cut(s)	611
BalI	TGGCCA	2 cut(s)	848, 1175
BarI	GAAGNNNNNNTAC	2 cut(s)	1221, 1253
BauI	CACGAG	1 cut(s)	186
BbsI	GAAGAC	1 cut(s)	638
Bbv12I	GWGCWC	2 cut(s)	36, 611
BbvI	GCAGC	7 cut(s)	369, 471, 493, 773, 875, 1025, 1968
BccI	CCATC	6 cut(s)	314, 1377, 1424, 1459, 1691, 1927
BceAI	ACGGC	2 cut(s)	249, 800
BciT130I	CCWGG	2 cut(s)	672, 813
BciVI	GTATCC	1 cut(s)	1778
BclI	TGATCA	1 cut(s)	1486
BcnI	CCSGG	1 cut(s)	1132
BcoDI	GTCTC	4 cut(s)	96, 1542, 1804, 1969
BcuI	ACTAGT	1 cut(s)	1634
BfaI	CTAG	6 cut(s)	210, 714, 1122, 1350, 1635, 1953
BfmI	CTRYAG	1 cut(s)	309
BfuI	GTATCC	1 cut(s)	1778
BglII	AGATCT	2 cut(s)	271, 1663
BisI	GCNGC	7 cut(s)	383, 482, 485, 762, 889, 1014, 1957
BlpI	GCTNAGC	1 cut(s)	1841
BlsI	GCNGC	7 cut(s)	384, 483, 486, 763, 890, 1015, 1958
Bme1390I	CCNGG	3 cut(s)	672, 813, 1132
Bme18I	GGWCC	1 cut(s)	616
BmeT110I	CYCGRG	1 cut(s)	429
BmgT120I	GGNCC	1 cut(s)	616
BmrFI	CCNGG	3 cut(s)	672, 813, 1132
BmrI	ACTGGG	1 cut(s)	1217
BmsI	GCATC	3 cut(s)	916, 1490, 1946
BmuI	ACTGGG	1 cut(s)	1217
BpiI	GAAGAC	1 cut(s)	638
BplI	GAGNNNNNCTC	2 cut(s)	1344, 1376
BpmI	CTGGAG	2 cut(s)	795, 1524
Bpu1102I	GCTNAGC	1 cut(s)	1841
BpuEI	CTTGAG	2 cut(s)	57, 1479
BpuMI	CCSGG	1 cut(s)	1132
BsaBI	GATNNNNATC	1 cut(s)	1241
BsaHI	GRCGYC	1 cut(s)	1703
BsaI	GGTCTC	2 cut(s)	96, 1804
BsaJI	CCNNGG	6 cut(s)	52, 265, 342, 782, 1654, 1929
BsaWI	WCCGGW	3 cut(s)	87, 536, 613
BsaXI	ACNNNNNCTCC	2 cut(s)	483, 513
Bsc4I	CCNNNNNNNGG	3 cut(s)	44, 812, 1680
Bse118I	RCCGGY	1 cut(s)	87
Bse1I	ACTGG	5 cut(s)	114, 139, 397, 1024, 1212
Bse3DI	GCAATG	4 cut(s)	18, 983, 1557, 1865
Bse8I	GATNNNNATC	1 cut(s)	1241
BseBI	CCWGG	2 cut(s)	672, 813
BseDI	CCNNGG	6 cut(s)	52, 265, 342, 782, 1654, 1929
BseGI	GGATG	5 cut(s)	173, 830, 1470, 1505, 1702
BseJI	GATNNNNATC	1 cut(s)	1241
BseLI	CCNNNNNNNGG	3 cut(s)	44, 812, 1680
BseMI	GCAATG	4 cut(s)	18, 983, 1557, 1865
BseMII	CTCAG	5 cut(s)	273, 1305, 1581, 1721, 1974
BseNI	ACTGG	5 cut(s)	114, 139, 397, 1024, 1212
BseRI	GAGGAG	4 cut(s)	146, 417, 666, 1820
BseSI	GKGCMC	1 cut(s)	611
BseXI	GCAGC	7 cut(s)	369, 471, 493, 773, 875, 1025, 1968
BsgI	GTGCAG	2 cut(s)	623, 1277
Bsh1236I	CGCG	1 cut(s)	1401
BshFI	GGCC	4 cut(s)	521, 787, 848, 1175
BshTI	ACCGGT	1 cut(s)	87
BsiHKAI	GWGCWC	2 cut(s)	36, 611
BsiHKCI	CYCGRG	1 cut(s)	429
BsiSI	CCGG	4 cut(s)	88, 537, 614, 1131
BslFI	GGGAC	2 cut(s)	324, 1714
BslI	CCNNNNNNNGG	3 cut(s)	44, 812, 1680
BsmAI	GTCTC	4 cut(s)	96, 1542, 1804, 1969
BsmFI	GGGAC	2 cut(s)	324, 1714
BsnI	GGCC	4 cut(s)	521, 787, 848, 1175
Bso31I	GGTCTC	2 cut(s)	96, 1804
BsoBI	CYCGRG	1 cut(s)	429
Bsp1286I	GDGCHC	2 cut(s)	36, 611
Bsp1407I	TGTACA	1 cut(s)	591
Bsp143I	GATC	6 cut(s)	271, 514, 1402, 1486, 1663, 1798
Bsp1720I	GCTNAGC	1 cut(s)	1841
Bsp68I	TCGCGA	1 cut(s)	1401
BspACI	CCGC	3 cut(s)	472, 779, 1341
BspANI	GGCC	4 cut(s)	521, 787, 848, 1175
BspCNI	CTCAG	5 cut(s)	274, 1304, 1580, 1722, 1973
BspFNI	CGCG	1 cut(s)	1401
BspPI	GGATC	2 cut(s)	522, 1793
BspTNI	GGTCTC	2 cut(s)	96, 1804
BsrDI	GCAATG	4 cut(s)	18, 983, 1557, 1865
BsrFI	RCCGGY	1 cut(s)	87
BsrGI	TGTACA	1 cut(s)	591
BsrI	ACTGG	5 cut(s)	114, 139, 397, 1024, 1212
BssAI	RCCGGY	1 cut(s)	87
BssECI	CCNNGG	6 cut(s)	52, 265, 342, 782, 1654, 1929
BssMI	GATC	6 cut(s)	271, 514, 1402, 1486, 1663, 1798
BssNI	GRCGYC	1 cut(s)	1703
BssSI	CACGAG	1 cut(s)	186
BssT1I	CCWWGG	2 cut(s)	52, 342
Bst2BI	CACGAG	1 cut(s)	186
Bst2UI	CCWGG	2 cut(s)	672, 813
Bst4CI	ACNGT	7 cut(s)	251, 499, 534, 976, 1563, 1655, 1785
Bst6I	CTCTTC	1 cut(s)	1106
BstACI	GRCGYC	1 cut(s)	1703
BstAUI	TGTACA	1 cut(s)	591
BstC8I	GCNNGC	5 cut(s)	217, 221, 380, 1414, 1881
BstDEI	CTNAG	8 cut(s)	282, 899, 1291, 1567, 1606, 1730, 1841, 1960
BstDSI	CCRYGG	4 cut(s)	265, 782, 1654, 1929
BstF5I	GGATG	5 cut(s)	173, 830, 1470, 1505, 1702
BstFNI	CGCG	1 cut(s)	1401
BstHHI	GCGC	2 cut(s)	387, 664
BstKTI	GATC	6 cut(s)	274, 517, 1405, 1489, 1666, 1801
BstMAI	GTCTC	4 cut(s)	96, 1542, 1804, 1969
BstMBI	GATC	6 cut(s)	271, 514, 1402, 1486, 1663, 1798
BstMWI	GCNNNNNNNGC	6 cut(s)	54, 311, 384, 527, 1876, 1934
BstNI	CCWGG	2 cut(s)	672, 813
BstNSI	RCATGY	3 cut(s)	382, 645, 1918
BstSCI	CCNGG	3 cut(s)	670, 811, 1130
BstSFI	CTRYAG	1 cut(s)	309
BstSLI	GKGCMC	1 cut(s)	611
BstUI	CGCG	1 cut(s)	1401
BstV1I	GCAGC	7 cut(s)	369, 471, 493, 773, 875, 1025, 1968
BstV2I	GAAGAC	1 cut(s)	638
BstX2I	RGATCY	4 cut(s)	271, 514, 1663, 1798
BstYI	RGATCY	4 cut(s)	271, 514, 1663, 1798
BsuI	GTATCC	1 cut(s)	1778
BsuRI	GGCC	4 cut(s)	521, 787, 848, 1175
BtgI	CCRYGG	4 cut(s)	265, 782, 1654, 1929
BtgZI	GCGATG	1 cut(s)	1382
BtsCI	GGATG	5 cut(s)	173, 830, 1470, 1505, 1702
BtsI	GCAGTG	3 cut(s)	611, 958, 1113
BtsIMutI	CAGTG	4 cut(s)	611, 958, 1113, 1575
BtuMI	TCGCGA	1 cut(s)	1401
Cac8I	GCNNGC	5 cut(s)	217, 221, 380, 1414, 1881
CfoI	GCGC	2 cut(s)	387, 664
Cfr10I	RCCGGY	1 cut(s)	87
Cfr13I	GGNCC	1 cut(s)	616
CseI	GACGC	1 cut(s)	1711
Csp6I	GTAC	2 cut(s)	367, 592
CspAI	ACCGGT	1 cut(s)	87
CviAII	CATG	6 cut(s)	379, 439, 642, 1556, 1837, 1915
CviQI	GTAC	2 cut(s)	367, 592
DdeI	CTNAG	8 cut(s)	282, 899, 1291, 1567, 1606, 1730, 1841, 1960
DpnI	GATC	6 cut(s)	273, 516, 1404, 1488, 1665, 1800
DpnII	GATC	6 cut(s)	271, 514, 1402, 1486, 1663, 1798
DraI	TTTAAA	1 cut(s)	105
EaeI	YGGCCR	2 cut(s)	846, 1173
Eam1104I	CTCTTC	1 cut(s)	1106
EarI	CTCTTC	1 cut(s)	1106
Eco130I	CCWWGG	2 cut(s)	52, 342
Eco31I	GGTCTC	2 cut(s)	96, 1804
Eco47I	GGWCC	1 cut(s)	616
Eco57I	CTGAAG	4 cut(s)	777, 1166, 1242, 1728
Eco88I	CYCGRG	1 cut(s)	429
EcoRII	CCWGG	2 cut(s)	670, 811
EcoT14I	CCWWGG	2 cut(s)	52, 342
EcoT22I	ATGCAT	1 cut(s)	1557
ErhI	CCWWGG	2 cut(s)	52, 342
FaeI	CATG	6 cut(s)	382, 442, 645, 1559, 1840, 1918
FaqI	GGGAC	2 cut(s)	324, 1714
FatI	CATG	6 cut(s)	378, 438, 641, 1555, 1836, 1914
FauI	CCCGC	2 cut(s)	479, 1334
FbaI	TGATCA	1 cut(s)	1486
Fnu4HI	GCNGC	7 cut(s)	383, 482, 485, 762, 889, 1014, 1957
FokI	GGATG	5 cut(s)	160, 817, 1477, 1512, 1709
Fsp4HI	GCNGC	7 cut(s)	383, 482, 485, 762, 889, 1014, 1957
FspBI	CTAG	6 cut(s)	210, 714, 1122, 1350, 1635, 1953
GlaI	GCGC	2 cut(s)	386, 663
GluI	GCNGC	7 cut(s)	383, 482, 485, 762, 889, 1014, 1957
GsuI	CTGGAG	2 cut(s)	795, 1524
HaeIII	GGCC	4 cut(s)	521, 787, 848, 1175
HapII	CCGG	4 cut(s)	88, 537, 614, 1131
HgaI	GACGC	1 cut(s)	1711
HhaI	GCGC	2 cut(s)	387, 664
Hin1I	GRCGYC	1 cut(s)	1703
Hin1II	CATG	6 cut(s)	382, 442, 645, 1559, 1840, 1918
Hin6I	GCGC	2 cut(s)	385, 662
HinP1I	GCGC	2 cut(s)	385, 662
HincII	GTYRAC	1 cut(s)	1320
HindII	GTYRAC	1 cut(s)	1320
HinfI	GANTC	7 cut(s)	198, 793, 980, 1289, 1357, 1376, 1721
HpaII	CCGG	4 cut(s)	88, 537, 614, 1131
HphI	GGTGA	3 cut(s)	268, 765, 1670
Hpy166II	GTNNAC	5 cut(s)	247, 609, 1072, 1320, 1781
Hpy188III	TCNNGA	8 cut(s)	406, 1122, 1373, 1400, 1541, 1669, 1793, 1802
Hpy8I	GTNNAC	5 cut(s)	247, 609, 1072, 1320, 1781
Hpy99I	CGWCG	2 cut(s)	374, 559
HpyAV	CCTTC	4 cut(s)	412, 780, 1046, 1217
HpyCH4III	ACNGT	7 cut(s)	251, 499, 534, 976, 1563, 1655, 1785
HpyCH4IV	ACGT	2 cut(s)	332, 702
HpyF10VI	GCNNNNNNNGC	6 cut(s)	54, 311, 384, 527, 1876, 1934
HpyF3I	CTNAG	8 cut(s)	282, 899, 1291, 1567, 1606, 1730, 1841, 1960
HpySE526I	ACGT	2 cut(s)	332, 702
Hsp92I	GRCGYC	1 cut(s)	1703
Hsp92II	CATG	6 cut(s)	382, 442, 645, 1559, 1840, 1918
HspAI	GCGC	2 cut(s)	385, 662
Ksp22I	TGATCA	1 cut(s)	1486
Kzo9I	GATC	6 cut(s)	271, 514, 1402, 1486, 1663, 1798
LmnI	GCTCC	6 cut(s)	39, 137, 430, 653, 1133, 1934
Lsp1109I	GCAGC	7 cut(s)	369, 471, 493, 773, 875, 1025, 1968
LweI	GCATC	3 cut(s)	916, 1490, 1946
MaeI	CTAG	6 cut(s)	210, 714, 1122, 1350, 1635, 1953
MaeII	ACGT	2 cut(s)	332, 702
MaeIII	GTNAC	5 cut(s)	698, 1037, 1615, 1756, 1847
MalI	GATC	6 cut(s)	273, 516, 1404, 1488, 1665, 1800
MboI	GATC	6 cut(s)	271, 514, 1402, 1486, 1663, 1798
MboII	GAAGA	9 cut(s)	156, 638, 788, 915, 1123, 1241, 1673, 1721, 1808
MfeI	CAATTG	2 cut(s)	861, 1005
MflI	RGATCY	4 cut(s)	271, 514, 1663, 1798
MhlI	GDGCHC	2 cut(s)	36, 611
MlsI	TGGCCA	2 cut(s)	848, 1175
MluCI	AATT	9 cut(s)	861, 957, 966, 1005, 1192, 1250, 1712, 1989, 1997
MluNI	TGGCCA	2 cut(s)	848, 1175
MlyI	GAGTC	2 cut(s)	989, 1283
MmeI	TCCRAC	4 cut(s)	201, 1290, 1498, 1698
Mox20I	TGGCCA	2 cut(s)	848, 1175
Mph1103I	ATGCAT	1 cut(s)	1557
MscI	TGGCCA	2 cut(s)	848, 1175
MseI	TTAA	6 cut(s)	104, 836, 1152, 1386, 1601, 1977
MslI	CAYNNNNRTG	2 cut(s)	1301, 1508
Msp20I	TGGCCA	2 cut(s)	848, 1175
MspA1I	CMGCKG	1 cut(s)	484
MspI	CCGG	4 cut(s)	88, 537, 614, 1131
MspR9I	CCNGG	3 cut(s)	672, 813, 1132
MssI	GTTTAAAC	1 cut(s)	105
MunI	CAATTG	2 cut(s)	861, 1005
MvaI	CCWGG	2 cut(s)	672, 813
MvnI	CGCG	1 cut(s)	1401
MwoI	GCNNNNNNNGC	6 cut(s)	54, 311, 384, 527, 1876, 1934
NciI	CCSGG	1 cut(s)	1132
NdeII	GATC	6 cut(s)	271, 514, 1402, 1486, 1663, 1798
NlaIII	CATG	6 cut(s)	382, 442, 645, 1559, 1840, 1918
NmeAIII	GCCGAG	1 cut(s)	1360
NruI	TCGCGA	1 cut(s)	1401
NsiI	ATGCAT	1 cut(s)	1557
NspI	RCATGY	3 cut(s)	382, 645, 1918
PaeI	GCATGC	1 cut(s)	382
PaeR7I	CTCGAG	1 cut(s)	429
PciI	ACATGT	1 cut(s)	641
PfeI	GAWTC	5 cut(s)	198, 793, 1357, 1376, 1721
PfoI	TCCNGGA	1 cut(s)	811
PinAI	ACCGGT	1 cut(s)	87
PkrI	GCNGC	7 cut(s)	384, 483, 486, 763, 890, 1015, 1958
PleI	GAGTC	2 cut(s)	988, 1283
PmeI	GTTTAAAC	1 cut(s)	105
PpsI	GAGTC	2 cut(s)	988, 1283
PscI	ACATGT	1 cut(s)	641
Psp1406I	AACGTT	2 cut(s)	332, 702
Psp6I	CCWGG	2 cut(s)	670, 811
PspGI	CCWGG	2 cut(s)	670, 811
PspPI	GGNCC	1 cut(s)	616
PspXI	VCTCGAGB	1 cut(s)	429
PsuI	RGATCY	4 cut(s)	271, 514, 1663, 1798
PvuII	CAGCTG	1 cut(s)	484
RruI	TCGCGA	1 cut(s)	1401
RsaI	GTAC	2 cut(s)	368, 593
RsaNI	GTAC	2 cut(s)	367, 592
RseI	CAYNNNNRTG	2 cut(s)	1301, 1508
SaqAI	TTAA	6 cut(s)	104, 836, 1152, 1386, 1601, 1977
SatI	GCNGC	7 cut(s)	383, 482, 485, 762, 889, 1014, 1957
Sau3AI	GATC	6 cut(s)	271, 514, 1402, 1486, 1663, 1798
Sau96I	GGNCC	1 cut(s)	616
SchI	GAGTC	2 cut(s)	989, 1283
ScrFI	CCNGG	3 cut(s)	672, 813, 1132
SduI	GDGCHC	2 cut(s)	36, 611
SfaNI	GCATC	3 cut(s)	916, 1490, 1946
SfcI	CTRYAG	1 cut(s)	309
Sfr274I	CTCGAG	1 cut(s)	429
SinI	GGWCC	1 cut(s)	616
SlaI	CTCGAG	1 cut(s)	429
SmiMI	CAYNNNNRTG	2 cut(s)	1301, 1508
SmlI	CTYRAG	3 cut(s)	72, 429, 1494
SmoI	CTYRAG	3 cut(s)	72, 429, 1494
SpeI	ACTAGT	1 cut(s)	1634
SphI	GCATGC	1 cut(s)	382
Sse9I	AATT	9 cut(s)	861, 957, 966, 1005, 1192, 1250, 1712, 1989, 1997
SsiI	CCGC	3 cut(s)	472, 779, 1341
SspI	AATATT	1 cut(s)	1476
SspMI	CTAG	6 cut(s)	210, 714, 1122, 1350, 1635, 1953
StyD4I	CCNGG	3 cut(s)	670, 811, 1130
StyI	CCWWGG	2 cut(s)	52, 342
TaaI	ACNGT	7 cut(s)	251, 499, 534, 976, 1563, 1655, 1785
TaiI	ACGT	2 cut(s)	335, 705
TaqI	TCGA	4 cut(s)	430, 649, 1287, 2008
TasI	AATT	9 cut(s)	861, 957, 966, 1005, 1192, 1250, 1712, 1989, 1997
TatI	WGTACW	1 cut(s)	591
TfiI	GAWTC	5 cut(s)	198, 793, 1357, 1376, 1721
Tru1I	TTAA	6 cut(s)	104, 836, 1152, 1386, 1601, 1977
Tru9I	TTAA	6 cut(s)	104, 836, 1152, 1386, 1601, 1977
TscAI	CASTG	4 cut(s)	611, 958, 1113, 1575
TseI	GCWGC	7 cut(s)	382, 481, 484, 761, 888, 1013, 1956
TspDTI	ATGAA	6 cut(s)	7, 747, 1263, 1454, 1767, 1995
TspRI	CASTG	4 cut(s)	611, 958, 1113, 1575
VneI	GTGCAC	1 cut(s)	607
VpaK11BI	GGWCC	1 cut(s)	616
XapI	RAATTY	2 cut(s)	1192, 1250
XbaI	TCTAGA	1 cut(s)	1121
XceI	RCATGY	3 cut(s)	382, 645, 1918
XhoI	CTCGAG	1 cut(s)	429
XspI	CTAG	6 cut(s)	210, 714, 1122, 1350, 1635, 1953
Zsp2I	ATGCAT	1 cut(s)	1557

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.