Rroxscaffold_1G00071450

Cysteine-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Reverse (-)
92265666 .. 92267851
2186 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00071450.1

Sequence Viewer

Length: 1611 bp
ATGGATCAGAAACAGACCAACATAATGCCTTGTTCTCATGTGCTCATGTCCTTTGTGCTGCTCTCCATTCTTGGTTTCCATAGCCTCAGCGTCGAAGCTGAAGTTCCTGACATGTCCCATTTCTGTTCAAACACAACAACTTTCACTCCCAACAGCACCTATGAGTCCAATCTCAATCTCCTCCTGTCCTATCTCACCTCCAACGCCACCAATGACCTCGGATTCCACAACACCACAGTCGGCTCCCAAGACCCCGGCACGACTGTTTACGGTTCATTTAATTGCCTTGGTGATGTCACCCCTGAAAAATGTCAAGAATGTGTGTCTACTATAGCCAGAGAAGGAGTCCAAAAGTATTGCCCCTTGAGCAAAATCTCATTAATATGGTATGCAGATTGCATGTTACGCTACTCAAACATATCCTTCTTTGGCAACTCGGAGACATCTCCTCGACTTTACGCTTGGAACACGGGGAATATCACTGAGCCTGACCGCTTCATGCCGCTGCTGGGACAAACTCTGAAGAGCTTGGTGGGACCTGCTGCTAGTGCACCTTCAGGTGTGAAAAAACTCAAAACAAAAGAAGTGAACTTCACAGATTTTCAGCCGTTGTACACCCTTGTGCAGTGCTCACCAGACCTATCGAGCCTAAGCTGTGAAGGTTGTCTTACAGAAGCTATTGCAGCTATTCCAAGCTCAAGCTGCCACACCTCCACCAGCGGCATCGCCACCGCTACCATCACTGCTTCTTCCTCCCCTCCTCCAGGTTCAGTAACGAGATCTCAAGGAAACGACAAAATCTCATCCTTGATCATAGTGGCCATTGTTGTTCCAATTGCCTTAGTGCTTTTCTTGGTAGGCTGCTTTTTTCTAAGAAGGAAGACAAGAAAAAAGTATGATGCTTTACAGGGACAGAATGGGGATAATGAAATTACTAATGTGGAGTCATTGCAGTTTGATTTTGCTACAATTGAAGCAGCCACAAACCAGTTCTTGGTTAATAATAGATTAGGGGAAGGTGGTTTTGGAGAGGTTTACAAGGGAACACTCCCTAATGGGCAAGAAATAGCTGTGAAGAGGTTATCTAGAAGCTCCGGGCAAGGTGTTGAGCAGTTTAAAAATGAGGTGGTTTTGGTCGCCAAGCTTCAGCACAGAAATTTAGTGAGGCTGCTGGGGTTTTGCTCTGAAGGAGAAGAAAAGATACTTGTTTATGAACTTGTGCAGAACAAAAGCCTTGACCACTTTTTATTCGACTCGGACATTCAAGTAAAGTTGGATTGGTCAAGCAGATACAAGATTATCAGTGGGATTGCTAGAGGCATTCTCTATCTCCATCAAGATTCTCGGCTTAAAATCATACATCGAGATCTTAAAGCGAGCAACATATTGTTAGATGGGGAAATGAACCCAAAAATAGCAGATTTTGGCATGGCAAGAATATTTGGAGGTGATCAAACACAAGGAAATACCATAAGGATTGTTGGAACTTACTTTATTGTTGCTGCTGATTATAGTGGTTACATGCCCCCGGAGTATGCAATGCACGGACAATTCTCGGTGAAGTCTGATGTGTACAGTCTTGGGGATTCTAACTGGCAAGAAGGACACTAG

Protein Analysis

536

Amino Acids

58.85

Weight (kDa)

5.92

Isoelectric Point (pI)

40.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Stress-antifung PF01657 42 - 139 1.5e-23 Salt stress response/antifungal
Stress-antifung PF01657 158 - 242 5e-06 Salt stress response/antifungal
Pkinase PF00069 333 - 528 7e-36 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 334 - 528 5.5e-38 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000283)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G45860 AT4G05200 AT4G05200 AT4G11521 AT4G11530 AT4G23130 AT4G23130 AT4G23130 AT4G23140 AT4G23140 AT4G23150 AT4G23160 AT4G23170 AT4G23180 AT4G23180 AT4G23180 AT4G23230 AT4G23270 AT4G23270 AT4G23270 AT4G23280 AT4G23280 AT4G23280 AT4G23310 AT4G23310
fragaria_vesca FvH4_3g02772 FvH4_3g02772 FvH4_3g02773 FvH4_3g02773 FvH4_3g02774 FvH4_3g02800 FvH4_3g02820 FvH4_3g02820 FvH4_3g02830
malus_domestica MD00G1101900.v1.1 MD00G1102100.v1.1 MD00G1102200.v1.1 MD01G1098200.v1.1 MD05G1340000.v1.1 MD05G1340300.v1.1 MD07G1014100.v1.1 MD07G1014300.v1.1 MD07G1014400.v1.1 MD07G1014700.v1.1 MD10G1312900.v1.1 MD11G1022600.v1.1 MD11G1291500.v1.1 MD14G1207100.v1.1 MD16G1096600.v1.1
prunus_persica Prupe.4G027300_v2.0.a1 Prupe.4G027400_v2.0.a1 Prupe.4G027700_v2.0.a1 Prupe.4G027800_v2.0.a1
pyrus_communis pycom05g30960 pycom10g00940 pycom10g00950 pycom10g26430 pycom10g26450 pycom10g26460 pycom10g26470 pycom10g26480 pycom10g26490 pycom10g26500 pycom10g26510 pycom10g26570 pycom11g01820 pycom11g04000 pycom14g17130 pycom14g17140 pycom15g28820
rosa_chinensis RchiOBHm_Chr4g0408141 RchiOBHm_Chr5g0004211 RchiOBHm_Chr5g0004231 RchiOBHm_Chr5g0004241 RchiOBHm_Chr5g0004261
rosa_laevigata RLG00000008668 RLG00000008672 RLG00000031212 RLG00000031217
rosa_multiflora Rmu_co8162658.1_g000001 Rmu_co8336297.1_g000001 Rmu_sc0002073.1_g000001 Rmu_sc0004964.1_g000002 Rmu_sc0004964.1_g000003 Rmu_sc0004964.1_g000007 Rmu_sc0006006.1_g000007 Rmu_sc0007868.1_g000015 Rmu_sc0007868.1_g000016 Rmu_sc0007868.1_g000017 Rmu_sc0007868.1_g000021 Rmu_sc0007868.1_g000023 Rmu_sc0019654.1_g000002 Rmu_sc0038540.1_g000001
rosa_roxburghii Rroxscaffold_1G00071450 Rroxscaffold_1G00071460 Rroxscaffold_1G00071470 Rroxscaffold_1G00071560 Rroxscaffold_1G00071720 Rroxscaffold_1G00071770 Rroxscaffold_5G00352640
rosa_rugosa Rorug04G0083700 Rorug04G0410700 Rorug04G0410800 Rorug04G0410900
rosa_samantha Rh4BG145400 Rh4CG154900 Rh4DG141900 Rh5BG037500 Rh5BG037600 Rh5BG037700 Rh5CG041000 Rh5CG041100 Rh5CG041200 Rh5CG041300 Rh5CG041400 Rh5DG037100
rosa_wichuraiana Rw4G012130 Rw5G003450 Rw5G003460 Rw5G003470 Rw5G003480 Rw5G003640 Rw5G003660 Rw5G003670 Rw5G003680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 547
AccB7I CCANNNNNTGG 1 cut(s) 994
AccI GTMKAC 1 cut(s) 326
AciI CCGC 4 cut(s) 493, 503, 720, 732
AclWI GGATC 1 cut(s) 12
AcoI YGGCCR 1 cut(s) 819
AcsI RAATTY 1 cut(s) 1156
AcuI CTGAAG 5 cut(s) 120, 540, 542, 1130, 1206
AfaI GTAC 2 cut(s) 614, 1574
AfiI CCNNNNNNNGG 3 cut(s) 509, 764, 994
AflIII ACRYGT 1 cut(s) 111
AgsI TTSAA 3 cut(s) 129, 974, 1265
AjnI CCWGG 1 cut(s) 763
AjuI GAANNNNNNNTTGG 2 cut(s) 1008, 1040
AleI CACNNNNGTG 1 cut(s) 620
Alw21I GWGCWC 3 cut(s) 45, 553, 632
Alw26I GTCTC 1 cut(s) 434
Alw44I GTGCAC 1 cut(s) 549
AlwI GGATC 1 cut(s) 12
AoxI GGCC 1 cut(s) 819
ApaLI GTGCAC 1 cut(s) 549
ApeKI GCWGC 9 cut(s) 58, 505, 542, 683, 702, 861, 977, 1168, 1502
ApoI RAATTY 1 cut(s) 1156
AseI ATTAAT 1 cut(s) 380
AspS9I GGNCC 1 cut(s) 536
AsuC2I CCSGG 3 cut(s) 255, 1096, 1529
AsuHPI GGTGA 6 cut(s) 187, 289, 302, 624, 1460, 1570
AvaII GGWCC 1 cut(s) 536
BaeGI GKGCMC 1 cut(s) 553
BalI TGGCCA 1 cut(s) 821
BarI GAAGNNNNNNTAC 2 cut(s) 1185, 1217
BbsI GAAGAC 1 cut(s) 887
Bbv12I GWGCWC 3 cut(s) 45, 553, 632
BbvCI CCTCAGC 1 cut(s) 86
BbvI GCAGC 9 cut(s) 45, 492, 529, 689, 695, 848, 989, 1155, 1489
BccI CCATC 3 cut(s) 746, 1341, 1388
BceAI ACGGC 1 cut(s) 592
BciT130I CCWGG 1 cut(s) 765
BclI TGATCA 2 cut(s) 810, 1450
BcnI CCSGG 3 cut(s) 255, 1096, 1529
BcoDI GTCTC 1 cut(s) 434
BfaI CTAG 4 cut(s) 546, 1086, 1314, 1609
BfmI CTRYAG 1 cut(s) 330
BfuAI ACCTGC 1 cut(s) 547
BglII AGATCT 2 cut(s) 779, 1366
Bme1390I CCNGG 4 cut(s) 255, 765, 1096, 1529
Bme18I GGWCC 1 cut(s) 536
BmgT120I GGNCC 1 cut(s) 536
BmiI GGNNCC 2 cut(s) 244, 537
BmrFI CCNGG 4 cut(s) 255, 765, 1096, 1529
BmsI GCATC 2 cut(s) 732, 889
BpiI GAAGAC 1 cut(s) 887
BplI GAGNNNNNCTC 2 cut(s) 1308, 1340
BpmI CTGGAG 1 cut(s) 747
Bpu10I CCTNAGC 2 cut(s) 86, 650
BpuEI CTTGAG 3 cut(s) 385, 682, 768
BpuMI CCSGG 3 cut(s) 255, 1096, 1529
BsaJI CCNNGG 4 cut(s) 217, 253, 286, 1527
BsaXI ACNNNNNCTCC 2 cut(s) 130, 160
Bsc4I CCNNNNNNNGG 3 cut(s) 509, 764, 994
Bse1I ACTGG 2 cut(s) 988, 1598
Bse3DI GCAATG 2 cut(s) 947, 1545
BseBI CCWGG 1 cut(s) 765
BseDI CCNNGG 4 cut(s) 217, 253, 286, 1527
BseGI GGATG 1 cut(s) 803
BseLI CCNNNNNNNGG 3 cut(s) 509, 764, 994
BseMI GCAATG 2 cut(s) 947, 1545
BseMII CTCAG 2 cut(s) 100, 474
BseNI ACTGG 2 cut(s) 988, 1598
BseRI GAGGAG 3 cut(s) 170, 438, 750
BseSI GKGCMC 1 cut(s) 553
BseXI GCAGC 9 cut(s) 45, 492, 529, 689, 695, 848, 989, 1155, 1489
BseYI CCCAGC 2 cut(s) 508, 1171
BsgI GTGCAG 2 cut(s) 644, 1241
BshFI GGCC 1 cut(s) 821
BsiHKAI GWGCWC 3 cut(s) 45, 553, 632
BsiSI CCGG 3 cut(s) 255, 1095, 1529
BslFI GGGAC 4 cut(s) 100, 525, 549, 924
BslI CCNNNNNNNGG 3 cut(s) 509, 764, 994
BsmAI GTCTC 1 cut(s) 434
BsmFI GGGAC 4 cut(s) 100, 525, 549, 924
BsmI GAATGC 1 cut(s) 1320
BsnI GGCC 1 cut(s) 821
Bsp1286I GDGCHC 3 cut(s) 45, 553, 632
Bsp1407I TGTACA 2 cut(s) 612, 1572
Bsp143I GATC 5 cut(s) 4, 779, 810, 1366, 1450
BspACI CCGC 4 cut(s) 493, 503, 720, 732
BspANI GGCC 1 cut(s) 821
BspCNI CTCAG 2 cut(s) 99, 475
BspLI GGNNCC 2 cut(s) 244, 537
BspMI ACCTGC 1 cut(s) 547
BspPI GGATC 1 cut(s) 12
BspQI GCTCTTC 1 cut(s) 518
BsrDI GCAATG 2 cut(s) 947, 1545
BsrGI TGTACA 2 cut(s) 612, 1572
BsrI ACTGG 2 cut(s) 988, 1598
BssECI CCNNGG 4 cut(s) 217, 253, 286, 1527
BssMI GATC 5 cut(s) 4, 779, 810, 1366, 1450
BssT1I CCWWGG 1 cut(s) 286
Bst2UI CCWGG 1 cut(s) 765
Bst4CI ACNGT 4 cut(s) 238, 265, 272, 1577
Bst6I CTCTTC 2 cut(s) 518, 1070
BstAUI TGTACA 2 cut(s) 612, 1572
BstC8I GCNNGC 1 cut(s) 1378
BstDEI CTNAG 5 cut(s) 86, 483, 650, 841, 872
BstENI CCTNNNNNAGG 1 cut(s) 762
BstF5I GGATG 1 cut(s) 803
BstKTI GATC 5 cut(s) 7, 782, 813, 1369, 1453
BstMAI GTCTC 1 cut(s) 434
BstMBI GATC 5 cut(s) 4, 779, 810, 1366, 1450
BstMWI GCNNNNNNNGC 5 cut(s) 366, 405, 548, 683, 702
BstNI CCWGG 1 cut(s) 765
BstNSI RCATGY 3 cut(s) 115, 403, 1525
BstSCI CCNGG 4 cut(s) 253, 763, 1094, 1527
BstSFI CTRYAG 1 cut(s) 330
BstSLI GKGCMC 1 cut(s) 553
BstV1I GCAGC 9 cut(s) 45, 492, 529, 689, 695, 848, 989, 1155, 1489
BstV2I GAAGAC 1 cut(s) 887
BstX2I RGATCY 2 cut(s) 779, 1366
BstYI RGATCY 2 cut(s) 779, 1366
BsuRI GGCC 1 cut(s) 821
BtgZI GCGATG 1 cut(s) 709
BtsCI GGATG 1 cut(s) 803
BtsI GCAGTG 2 cut(s) 632, 741
BtsIMutI CAGTG 4 cut(s) 480, 632, 741, 1309
BveI ACCTGC 1 cut(s) 547
Cac8I GCNNGC 1 cut(s) 1378
Cfr13I GGNCC 1 cut(s) 536
CseI GACGC 1 cut(s) 79
Csp6I GTAC 2 cut(s) 613, 1573
CviAII CATG 7 cut(s) 38, 46, 112, 400, 499, 1429, 1522
CviQI GTAC 2 cut(s) 613, 1573
DdeI CTNAG 5 cut(s) 86, 483, 650, 841, 872
DpnI GATC 5 cut(s) 6, 781, 812, 1368, 1452
DpnII GATC 5 cut(s) 4, 779, 810, 1366, 1450
DraI TTTAAA 1 cut(s) 1117
EaeI YGGCCR 1 cut(s) 819
Eam1104I CTCTTC 2 cut(s) 518, 1070
EarI CTCTTC 2 cut(s) 518, 1070
Eco130I CCWWGG 1 cut(s) 286
Eco47I GGWCC 1 cut(s) 536
Eco57I CTGAAG 5 cut(s) 120, 540, 542, 1130, 1206
EcoNI CCTNNNNNAGG 1 cut(s) 762
EcoO109I RGGNCCY 1 cut(s) 536
EcoRII CCWGG 1 cut(s) 763
EcoT14I CCWWGG 1 cut(s) 286
ErhI CCWWGG 1 cut(s) 286
FaeI CATG 7 cut(s) 41, 49, 115, 403, 502, 1432, 1525
FalI AAGNNNNNCTT 2 cut(s) 651, 683
FaqI GGGAC 4 cut(s) 100, 525, 549, 924
FatI CATG 7 cut(s) 37, 45, 111, 399, 498, 1428, 1521
FbaI TGATCA 2 cut(s) 810, 1450
FblI GTMKAC 1 cut(s) 326
FokI GGATG 1 cut(s) 790
FspBI CTAG 4 cut(s) 546, 1086, 1314, 1609
GsaI CCCAGC 2 cut(s) 512, 1175
GsuI CTGGAG 1 cut(s) 747
HaeIII GGCC 1 cut(s) 821
HapII CCGG 3 cut(s) 255, 1095, 1529
HgaI GACGC 1 cut(s) 79
Hin1II CATG 7 cut(s) 41, 49, 115, 403, 502, 1432, 1525
HindIII AAGCTT 1 cut(s) 1142
HinfI GANTC 7 cut(s) 164, 222, 345, 944, 1253, 1340, 1586
HpaII CCGG 3 cut(s) 255, 1095, 1529
HphI GGTGA 6 cut(s) 187, 289, 302, 624, 1460, 1570
Hpy166II GTNNAC 7 cut(s) 268, 327, 551, 589, 615, 1036, 1573
Hpy188I TCNGA 7 cut(s) 9, 221, 439, 522, 1186, 1258, 1567
Hpy188III TCNNGA 5 cut(s) 107, 314, 1086, 1337, 1364
Hpy8I GTNNAC 7 cut(s) 268, 327, 551, 589, 615, 1036, 1573
Hpy99I CGWCG 1 cut(s) 95
HpyAV CCTTC 8 cut(s) 335, 433, 564, 653, 870, 1010, 1181, 1595
HpyCH4III ACNGT 4 cut(s) 238, 265, 272, 1577
HpyCH4V TGCA 9 cut(s) 392, 399, 551, 625, 683, 952, 1222, 1538, 1543
HpyF10VI GCNNNNNNNGC 5 cut(s) 366, 405, 548, 683, 702
HpyF3I CTNAG 5 cut(s) 86, 483, 650, 841, 872
Hsp92II CATG 7 cut(s) 41, 49, 115, 403, 502, 1432, 1525
Ksp22I TGATCA 2 cut(s) 810, 1450
Kzo9I GATC 5 cut(s) 4, 779, 810, 1366, 1450
LguI GCTCTTC 1 cut(s) 518
LmnI GCTCC 2 cut(s) 248, 1097
Lsp1109I GCAGC 9 cut(s) 45, 492, 529, 689, 695, 848, 989, 1155, 1489
LweI GCATC 2 cut(s) 732, 889
MaeI CTAG 4 cut(s) 546, 1086, 1314, 1609
MaeIII GTNAC 4 cut(s) 295, 402, 772, 1517
MalI GATC 5 cut(s) 6, 781, 812, 1368, 1452
MboI GATC 5 cut(s) 4, 779, 810, 1366, 1450
MboII GAAGA 5 cut(s) 535, 741, 892, 1087, 1205
MfeI CAATTG 2 cut(s) 834, 969
MflI RGATCY 2 cut(s) 779, 1366
MhlI GDGCHC 3 cut(s) 45, 553, 632
MlsI TGGCCA 1 cut(s) 821
MluCI AATT 6 cut(s) 280, 834, 930, 969, 1156, 1550
MluNI TGGCCA 1 cut(s) 821
MlyI GAGTC 4 cut(s) 173, 354, 953, 1247
MmeI TCCRAC 3 cut(s) 225, 1254, 1462
Mox20I TGGCCA 1 cut(s) 821
MscI TGGCCA 1 cut(s) 821
MseI TTAA 6 cut(s) 279, 380, 999, 1116, 1350, 1371
MslI CAYNNNNRTG 2 cut(s) 382, 620
Msp20I TGGCCA 1 cut(s) 821
MspA1I CMGCKG 2 cut(s) 505, 720
MspI CCGG 3 cut(s) 255, 1095, 1529
MspR9I CCNGG 4 cut(s) 255, 765, 1096, 1529
MunI CAATTG 2 cut(s) 834, 969
Mva1269I GAATGC 1 cut(s) 1320
MvaI CCWGG 1 cut(s) 765
MwoI GCNNNNNNNGC 5 cut(s) 366, 405, 548, 683, 702
NciI CCSGG 3 cut(s) 255, 1096, 1529
NdeII GATC 5 cut(s) 4, 779, 810, 1366, 1450
NlaIII CATG 7 cut(s) 41, 49, 115, 403, 502, 1432, 1525
NlaIV GGNNCC 2 cut(s) 244, 537
NmeAIII GCCGAG 1 cut(s) 1324
NmuCI GTSAC 1 cut(s) 295
NspI RCATGY 3 cut(s) 115, 403, 1525
OliI CACNNNNGTG 1 cut(s) 620
PciI ACATGT 1 cut(s) 111
PciSI GCTCTTC 1 cut(s) 518
PctI GAATGC 1 cut(s) 1320
PfeI GAWTC 3 cut(s) 222, 1340, 1586
PflMI CCANNNNNTGG 1 cut(s) 994
PleI GAGTC 4 cut(s) 172, 353, 952, 1247
PpsI GAGTC 4 cut(s) 172, 353, 952, 1247
PpuMI RGGWCCY 1 cut(s) 536
PscI ACATGT 1 cut(s) 111
PshBI ATTAAT 1 cut(s) 380
Psp5II RGGWCCY 1 cut(s) 536
Psp6I CCWGG 1 cut(s) 763
PspFI CCCAGC 2 cut(s) 508, 1171
PspGI CCWGG 1 cut(s) 763
PspN4I GGNNCC 2 cut(s) 244, 537
PspPI GGNCC 1 cut(s) 536
PspPPI RGGWCCY 1 cut(s) 536
PsuI RGATCY 2 cut(s) 779, 1366
RsaI GTAC 2 cut(s) 614, 1574
RsaNI GTAC 2 cut(s) 613, 1573
RseI CAYNNNNRTG 2 cut(s) 382, 620
SapI GCTCTTC 1 cut(s) 518
SaqAI TTAA 6 cut(s) 279, 380, 999, 1116, 1350, 1371
Sau3AI GATC 5 cut(s) 4, 779, 810, 1366, 1450
Sau96I GGNCC 1 cut(s) 536
SchI GAGTC 4 cut(s) 173, 354, 953, 1247
ScrFI CCNGG 4 cut(s) 255, 765, 1096, 1529
SduI GDGCHC 3 cut(s) 45, 553, 632
SfaNI GCATC 2 cut(s) 732, 889
SfcI CTRYAG 1 cut(s) 330
SinI GGWCC 1 cut(s) 536
SmiMI CAYNNNNRTG 2 cut(s) 382, 620
SmlI CTYRAG 3 cut(s) 364, 697, 783
SmoI CTYRAG 3 cut(s) 364, 697, 783
Sse9I AATT 6 cut(s) 280, 834, 930, 969, 1156, 1550
SsiI CCGC 4 cut(s) 493, 503, 720, 732
SspI AATATT 1 cut(s) 1440
SspMI CTAG 4 cut(s) 546, 1086, 1314, 1609
StyD4I CCNGG 4 cut(s) 253, 763, 1094, 1527
StyI CCWWGG 1 cut(s) 286
TaaI ACNGT 4 cut(s) 238, 265, 272, 1577
TaqI TCGA 5 cut(s) 93, 451, 644, 1251, 1363
TasI AATT 6 cut(s) 280, 834, 930, 969, 1156, 1550
TatI WGTACW 2 cut(s) 612, 1572
TauI GCSGC 2 cut(s) 505, 723
TfiI GAWTC 3 cut(s) 222, 1340, 1586
Tru1I TTAA 6 cut(s) 279, 380, 999, 1116, 1350, 1371
Tru9I TTAA 6 cut(s) 279, 380, 999, 1116, 1350, 1371
TscAI CASTG 4 cut(s) 487, 632, 748, 1309
TseFI GTSAC 1 cut(s) 295
TseI GCWGC 9 cut(s) 58, 505, 542, 683, 702, 861, 977, 1168, 1502
Tsp45I GTSAC 1 cut(s) 295
TspDTI ATGAA 5 cut(s) 264, 487, 942, 1227, 1418
TspGWI ACGGA 1 cut(s) 1560
TspRI CASTG 4 cut(s) 487, 632, 748, 1309
Van91I CCANNNNNTGG 1 cut(s) 994
VneI GTGCAC 1 cut(s) 549
VpaK11BI GGWCC 1 cut(s) 536
VspI ATTAAT 1 cut(s) 380
XagI CCTNNNNNAGG 1 cut(s) 762
XapI RAATTY 1 cut(s) 1156
XbaI TCTAGA 1 cut(s) 1085
XceI RCATGY 3 cut(s) 115, 403, 1525
XmiI GTMKAC 1 cut(s) 326
XspI CTAG 4 cut(s) 546, 1086, 1314, 1609
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.