Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr14

Orthogroup ID

OG0000283

Physical Location & Seq

Genomic Coordinates Reverse (-)

29404456 .. 29405076

Gene Structure 621 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD14G1207100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 621 bp

ATGAAAAACATTACTGCCCTTCTTTTGATTATTTCCGTTTTTACTCTGCTCAGCTTTCCGACCAGTACGGAAGCTGATTACCTGGCTCAACTCTGCCCAAACACCGCCACCTTCACCCCAAACTCCACCTTCCAGTCCAACCTCAACCGCCTCCTCTCCACCCTCTCCTCCAACGCTAACCACTCCACCGGTTTCTACAACGCCACAGTCCAAACCACAAACAACGCCGTGTACGGCCTTTTCCTCTGCCGCGGCGACGTCGTGGGCACCGACGCTTGCGAAACCTGTGTCGCCACCGCAATCCCCGAGGCCCCAAAACGCTGCTCCTTAAAAAAACAGGTGGTGATCTGGTACGACGACTGCATGCTACGCTATTCCAACGAGTTATTCTTCTCCACCGCCCCTGAGTTGACCCCCCTGTACATGTGGGACATGGATAACGCCACCGACCAGACTCGGTTCAACCAGGTGGTGGAGGCGAGTATGAACGAGGTGGCTACAAAGGCTGCCTACGACGCCGACAAGTTCGCTACAAAAGAAGAGAACGTCAGTGATCTGATTCCCCTGTACAGCCTTGGACAGTGCACACAGGACCTGTCTGATGAATATCGTCTTTGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009617 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0042742 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050896 GO:0051704 GO:0051707 GO:0071704 GO:0071944 GO:0098542 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr Stress-antifung

Protein Analysis

207

Amino Acids

22.91

Weight (kDa)

4.43

Isoelectric Point (pI)

31.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Stress-antifung	PF01657	32 - 128	1.2e-27	Salt stress response/antifungal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000283)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G45860 AT4G05200 AT4G05200 AT4G11521 AT4G11530 AT4G23130 AT4G23130 AT4G23130 AT4G23140 AT4G23140 AT4G23150 AT4G23160 AT4G23170 AT4G23180 AT4G23180 AT4G23180 AT4G23230 AT4G23270 AT4G23270 AT4G23270 AT4G23280 AT4G23280 AT4G23280 AT4G23310 AT4G23310
fragaria_vesca	FvH4_3g02772 FvH4_3g02772 FvH4_3g02773 FvH4_3g02773 FvH4_3g02774 FvH4_3g02800 FvH4_3g02820 FvH4_3g02820 FvH4_3g02830
malus_domestica	MD00G1101900.v1.1 MD00G1102100.v1.1 MD00G1102200.v1.1 MD01G1098200.v1.1 MD05G1340000.v1.1 MD05G1340300.v1.1 MD07G1014100.v1.1 MD07G1014300.v1.1 MD07G1014400.v1.1 MD07G1014700.v1.1 MD10G1312900.v1.1 MD11G1022600.v1.1 MD11G1291500.v1.1 MD14G1207100.v1.1 MD16G1096600.v1.1
prunus_persica	Prupe.4G027300_v2.0.a1 Prupe.4G027400_v2.0.a1 Prupe.4G027700_v2.0.a1 Prupe.4G027800_v2.0.a1
pyrus_communis	pycom05g30960 pycom10g00940 pycom10g00950 pycom10g26430 pycom10g26450 pycom10g26460 pycom10g26470 pycom10g26480 pycom10g26490 pycom10g26500 pycom10g26510 pycom10g26570 pycom11g01820 pycom11g04000 pycom14g17130 pycom14g17140 pycom15g28820
rosa_chinensis	RchiOBHm_Chr4g0408141 RchiOBHm_Chr5g0004211 RchiOBHm_Chr5g0004231 RchiOBHm_Chr5g0004241 RchiOBHm_Chr5g0004261
rosa_laevigata	RLG00000008668 RLG00000008672 RLG00000031212 RLG00000031217
rosa_multiflora	Rmu_co8162658.1_g000001 Rmu_co8336297.1_g000001 Rmu_sc0002073.1_g000001 Rmu_sc0004964.1_g000002 Rmu_sc0004964.1_g000003 Rmu_sc0004964.1_g000007 Rmu_sc0006006.1_g000007 Rmu_sc0007868.1_g000015 Rmu_sc0007868.1_g000016 Rmu_sc0007868.1_g000017 Rmu_sc0007868.1_g000021 Rmu_sc0007868.1_g000023 Rmu_sc0019654.1_g000002 Rmu_sc0038540.1_g000001
rosa_roxburghii	Rroxscaffold_1G00071450 Rroxscaffold_1G00071460 Rroxscaffold_1G00071470 Rroxscaffold_1G00071560 Rroxscaffold_1G00071720 Rroxscaffold_1G00071770 Rroxscaffold_5G00352640
rosa_rugosa	Rorug04G0083700 Rorug04G0410700 Rorug04G0410800 Rorug04G0410900
rosa_samantha	Rh4BG145400 Rh4CG154900 Rh4DG141900 Rh5BG037500 Rh5BG037600 Rh5BG037700 Rh5CG041000 Rh5CG041100 Rh5CG041200 Rh5CG041300 Rh5CG041400 Rh5DG037100
rosa_wichuraiana	Rw4G012130 Rw5G003450 Rw5G003460 Rw5G003470 Rw5G003480 Rw5G003640 Rw5G003660 Rw5G003670 Rw5G003680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	261
AccB1I	GGYRCC	1 cut(s)	266
AccB7I	CCANNNNNTGG	1 cut(s)	472
AccII	CGCG	1 cut(s)	252
AciI	CCGC	6 cut(s)	105, 148, 250, 252, 297, 399
AcyI	GRCGYC	2 cut(s)	258, 516
AfaI	GTAC	5 cut(s)	67, 233, 353, 422, 569
AfiI	CCNNNNNNNGG	1 cut(s)	472
AflIII	ACRYGT	1 cut(s)	423
AgeI	ACCGGT	1 cut(s)	188
AgsI	TTSAA	1 cut(s)	463
AjnI	CCWGG	2 cut(s)	81, 465
AjuI	GAANNNNNNNTTGG	2 cut(s)	371, 403
AluBI	AGCT	2 cut(s)	54, 74
AluI	AGCT	2 cut(s)	54, 74
Alw21I	GWGCWC	1 cut(s)	587
Alw44I	GTGCAC	1 cut(s)	583
AlwNI	CAGNNNCTG	1 cut(s)	595
Ama87I	CYCGRG	1 cut(s)	305
AoxI	GGCC	2 cut(s)	235, 309
ApaLI	GTGCAC	1 cut(s)	583
ApeKI	GCWGC	2 cut(s)	321, 506
ArsI	GACNNNNNNTTYG	2 cut(s)	273, 305
AsiGI	ACCGGT	1 cut(s)	188
AspS9I	GGNCC	2 cut(s)	310, 592
AsuHPI	GGTGA	2 cut(s)	106, 355
AvaI	CYCGRG	1 cut(s)	305
AvaII	GGWCC	1 cut(s)	592
BaeGI	GKGCMC	2 cut(s)	269, 587
BanI	GGYRCC	1 cut(s)	266
Bbv12I	GWGCWC	1 cut(s)	587
BbvI	GCAGC	2 cut(s)	308, 493
BceAI	ACGGC	2 cut(s)	212, 250
BciT130I	CCWGG	2 cut(s)	83, 467
BisI	GCNGC	4 cut(s)	250, 253, 322, 507
BlpI	GCTNAGC	1 cut(s)	50
BlsI	GCNGC	4 cut(s)	251, 254, 323, 508
Bme1390I	CCNGG	2 cut(s)	83, 467
Bme18I	GGWCC	1 cut(s)	592
BmeT110I	CYCGRG	1 cut(s)	305
BmgT120I	GGNCC	2 cut(s)	310, 592
BmiI	GGNNCC	2 cut(s)	268, 312
BmrFI	CCNGG	2 cut(s)	83, 467
Bpu1102I	GCTNAGC	1 cut(s)	50
BsaBI	GATNNNNATC	1 cut(s)	606
BsaHI	GRCGYC	2 cut(s)	258, 516
BsaJI	CCNNGG	3 cut(s)	250, 306, 574
BsaWI	WCCGGW	1 cut(s)	188
Bsc4I	CCNNNNNNNGG	1 cut(s)	472
Bse118I	RCCGGY	1 cut(s)	188
Bse1I	ACTGG	2 cut(s)	63, 133
Bse8I	GATNNNNATC	1 cut(s)	606
BseBI	CCWGG	2 cut(s)	83, 467
BseDI	CCNNGG	3 cut(s)	250, 306, 574
BseJI	GATNNNNATC	1 cut(s)	606
BseLI	CCNNNNNNNGG	1 cut(s)	472
BseMII	CTCAG	2 cut(s)	64, 396
BseNI	ACTGG	2 cut(s)	63, 133
BseRI	GAGGAG	2 cut(s)	143, 157
BseSI	GKGCMC	2 cut(s)	269, 587
BseXI	GCAGC	2 cut(s)	308, 493
Bsh1236I	CGCG	1 cut(s)	252
BshFI	GGCC	2 cut(s)	237, 311
BshNI	GGYRCC	1 cut(s)	266
BshTI	ACCGGT	1 cut(s)	188
BsiHKAI	GWGCWC	1 cut(s)	587
BsiHKCI	CYCGRG	1 cut(s)	305
BsiSI	CCGG	1 cut(s)	189
BslFI	GGGAC	1 cut(s)	443
BslI	CCNNNNNNNGG	1 cut(s)	472
BsmFI	GGGAC	1 cut(s)	443
BsnI	GGCC	2 cut(s)	237, 311
BsoBI	CYCGRG	1 cut(s)	305
Bsp1286I	GDGCHC	2 cut(s)	269, 587
Bsp1407I	TGTACA	2 cut(s)	420, 567
Bsp143I	GATC	2 cut(s)	345, 553
Bsp1720I	GCTNAGC	1 cut(s)	50
BspACI	CCGC	6 cut(s)	105, 148, 250, 252, 297, 399
BspANI	GGCC	2 cut(s)	237, 311
BspCNI	CTCAG	2 cut(s)	63, 397
BspFNI	CGCG	1 cut(s)	252
BspLI	GGNNCC	2 cut(s)	268, 312
BspT107I	GGYRCC	1 cut(s)	266
BsrFI	RCCGGY	1 cut(s)	188
BsrGI	TGTACA	2 cut(s)	420, 567
BsrI	ACTGG	2 cut(s)	63, 133
BssAI	RCCGGY	1 cut(s)	188
BssECI	CCNNGG	3 cut(s)	250, 306, 574
BssMI	GATC	2 cut(s)	345, 553
BssNI	GRCGYC	2 cut(s)	258, 516
BssT1I	CCWWGG	1 cut(s)	574
Bst2UI	CCWGG	2 cut(s)	83, 467
Bst4CI	ACNGT	2 cut(s)	208, 582
Bst6I	CTCTTC	1 cut(s)	534
BstACI	GRCGYC	2 cut(s)	258, 516
BstAUI	TGTACA	2 cut(s)	420, 567
BstC8I	GCNNGC	2 cut(s)	277, 365
BstDEI	CTNAG	2 cut(s)	50, 405
BstDSI	CCRYGG	1 cut(s)	250
BstFNI	CGCG	1 cut(s)	252
BstKTI	GATC	2 cut(s)	348, 556
BstMBI	GATC	2 cut(s)	345, 553
BstMWI	GCNNNNNNNGC	3 cut(s)	369, 503, 515
BstNI	CCWGG	2 cut(s)	83, 467
BstNSI	RCATGY	2 cut(s)	367, 427
BstSCI	CCNGG	2 cut(s)	81, 465
BstSLI	GKGCMC	2 cut(s)	269, 587
BstUI	CGCG	1 cut(s)	252
BstV1I	GCAGC	2 cut(s)	308, 493
BsuRI	GGCC	2 cut(s)	237, 311
BtgI	CCRYGG	1 cut(s)	250
BtsIMutI	CAGTG	2 cut(s)	556, 587
Cac8I	GCNNGC	2 cut(s)	277, 365
CaiI	CAGNNNCTG	1 cut(s)	595
Cfr10I	RCCGGY	1 cut(s)	188
Cfr13I	GGNCC	2 cut(s)	310, 592
Cfr42I	CCGCGG	1 cut(s)	253
CseI	GACGC	2 cut(s)	281, 524
CsiI	ACCWGGT	1 cut(s)	465
Csp6I	GTAC	5 cut(s)	66, 232, 352, 421, 568
CspAI	ACCGGT	1 cut(s)	188
CviAII	CATG	3 cut(s)	364, 424, 433
CviJI	RGCY	8 cut(s)	54, 74, 86, 237, 311, 497, 506, 573
CviKI_1	RGCY	8 cut(s)	54, 74, 86, 237, 311, 497, 506, 573
CviQI	GTAC	5 cut(s)	66, 232, 352, 421, 568
DdeI	CTNAG	2 cut(s)	50, 405
DpnI	GATC	2 cut(s)	347, 555
DpnII	GATC	2 cut(s)	345, 553
Eam1104I	CTCTTC	1 cut(s)	534
EarI	CTCTTC	1 cut(s)	534
Eco130I	CCWWGG	1 cut(s)	574
Eco47I	GGWCC	1 cut(s)	592
Eco88I	CYCGRG	1 cut(s)	305
EcoO109I	RGGNCCY	2 cut(s)	310, 592
EcoRII	CCWGG	2 cut(s)	81, 465
EcoT14I	CCWWGG	1 cut(s)	574
ErhI	CCWWGG	1 cut(s)	574
FaeI	CATG	3 cut(s)	367, 427, 436
FaiI	YATR	4 cut(s)	365, 425, 434, 485
FaqI	GGGAC	1 cut(s)	443
FatI	CATG	3 cut(s)	363, 423, 432
Fnu4HI	GCNGC	4 cut(s)	250, 253, 322, 507
Fsp4HI	GCNGC	4 cut(s)	250, 253, 322, 507
GluI	GCNGC	4 cut(s)	250, 253, 322, 507
HaeIII	GGCC	2 cut(s)	237, 311
HapII	CCGG	1 cut(s)	189
HgaI	GACGC	2 cut(s)	281, 524
Hin1I	GRCGYC	2 cut(s)	258, 516
Hin1II	CATG	3 cut(s)	367, 427, 436
HincII	GTYRAC	1 cut(s)	411
HindII	GTYRAC	1 cut(s)	411
HinfI	GANTC	2 cut(s)	454, 559
HpaII	CCGG	1 cut(s)	189
HphI	GGTGA	2 cut(s)	106, 355
Hpy166II	GTNNAC	3 cut(s)	232, 411, 585
Hpy188I	TCNGA	3 cut(s)	60, 558, 601
Hpy8I	GTNNAC	3 cut(s)	232, 411, 585
Hpy99I	CGWCG	5 cut(s)	260, 263, 275, 359, 518
HpyAV	CCTTC	3 cut(s)	29, 121, 139
HpyCH4III	ACNGT	2 cut(s)	208, 582
HpyCH4IV	ACGT	2 cut(s)	258, 546
HpyCH4V	TGCA	2 cut(s)	363, 585
HpyF10VI	GCNNNNNNNGC	3 cut(s)	369, 503, 515
HpyF3I	CTNAG	2 cut(s)	50, 405
HpySE526I	ACGT	2 cut(s)	258, 546
Hsp92I	GRCGYC	2 cut(s)	258, 516
Hsp92II	CATG	3 cut(s)	367, 427, 436
KspI	CCGCGG	1 cut(s)	253
Kzo9I	GATC	2 cut(s)	345, 553
LmnI	GCTCC	1 cut(s)	329
Lsp1109I	GCAGC	2 cut(s)	308, 493
MabI	ACCWGGT	1 cut(s)	465
MaeII	ACGT	2 cut(s)	258, 546
MalI	GATC	2 cut(s)	347, 555
MboI	GATC	2 cut(s)	345, 553
MboII	GAAGA	2 cut(s)	382, 551
MhlI	GDGCHC	2 cut(s)	269, 587
MlyI	GAGTC	1 cut(s)	448
MmeI	TCCRAC	4 cut(s)	83, 162, 195, 402
MnlI	CCTC	9 cut(s)	152, 161, 164, 173, 178, 254, 301, 469, 484
MseI	TTAA	1 cut(s)	329
MspA1I	CMGCKG	1 cut(s)	252
MspI	CCGG	1 cut(s)	189
MspR9I	CCNGG	2 cut(s)	83, 467
MvaI	CCWGG	2 cut(s)	83, 467
MvnI	CGCG	1 cut(s)	252
MwoI	GCNNNNNNNGC	3 cut(s)	369, 503, 515
NdeII	GATC	2 cut(s)	345, 553
NlaIII	CATG	3 cut(s)	367, 427, 436
NlaIV	GGNNCC	2 cut(s)	268, 312
NspI	RCATGY	2 cut(s)	367, 427
PaeI	GCATGC	1 cut(s)	367
PciI	ACATGT	1 cut(s)	423
PcsI	WCGNNNNNNNCGW	1 cut(s)	267
PfeI	GAWTC	1 cut(s)	559
PflMI	CCANNNNNTGG	1 cut(s)	472
PinAI	ACCGGT	1 cut(s)	188
PkrI	GCNGC	4 cut(s)	251, 254, 323, 508
PleI	GAGTC	1 cut(s)	448
PpsI	GAGTC	1 cut(s)	448
PpuMI	RGGWCCY	1 cut(s)	592
PscI	ACATGT	1 cut(s)	423
Psp5II	RGGWCCY	1 cut(s)	592
Psp6I	CCWGG	2 cut(s)	81, 465
PspGI	CCWGG	2 cut(s)	81, 465
PspN4I	GGNNCC	2 cut(s)	268, 312
PspPI	GGNCC	2 cut(s)	310, 592
PspPPI	RGGWCCY	1 cut(s)	592
PstNI	CAGNNNCTG	1 cut(s)	595
RsaI	GTAC	5 cut(s)	67, 233, 353, 422, 569
RsaNI	GTAC	5 cut(s)	66, 232, 352, 421, 568
SacII	CCGCGG	1 cut(s)	253
SaqAI	TTAA	1 cut(s)	329
SatI	GCNGC	4 cut(s)	250, 253, 322, 507
Sau3AI	GATC	2 cut(s)	345, 553
Sau96I	GGNCC	2 cut(s)	310, 592
SchI	GAGTC	1 cut(s)	448
ScrFI	CCNGG	2 cut(s)	83, 467
SduI	GDGCHC	2 cut(s)	269, 587
SexAI	ACCWGGT	1 cut(s)	465
Sfr303I	CCGCGG	1 cut(s)	253
SgrBI	CCGCGG	1 cut(s)	253
SinI	GGWCC	1 cut(s)	592
SphI	GCATGC	1 cut(s)	367
SsiI	CCGC	6 cut(s)	105, 148, 250, 252, 297, 399
StyD4I	CCNGG	2 cut(s)	81, 465
StyI	CCWWGG	1 cut(s)	574
TaaI	ACNGT	2 cut(s)	208, 582
TaiI	ACGT	2 cut(s)	261, 549
TatI	WGTACW	2 cut(s)	420, 567
TauI	GCSGC	2 cut(s)	252, 255
TfiI	GAWTC	1 cut(s)	559
Tru1I	TTAA	1 cut(s)	329
Tru9I	TTAA	1 cut(s)	329
TscAI	CASTG	2 cut(s)	556, 587
TseI	GCWGC	2 cut(s)	321, 506
TspDTI	ATGAA	3 cut(s)	17, 500, 618
TspGWI	ACGGA	2 cut(s)	25, 83
TspRI	CASTG	2 cut(s)	556, 587
Van91I	CCANNNNNTGG	1 cut(s)	472
VneI	GTGCAC	1 cut(s)	583
VpaK11BI	GGWCC	1 cut(s)	592
XceI	RCATGY	2 cut(s)	367, 427
ZraI	GACGTC	1 cut(s)	259

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.