Rw5G003670

Cysteine-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Forward (+)
3609759 .. 3612008
2250 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G003670.1

Sequence Viewer

Length: 1485 bp
ATGCTGGTGGCAGAAACAGTCAATGGCTTGGTGGCTCCGGCTTCAAATGCGCCCTCCGGTGCTAAAAAGTATGCAACAAAAGAAGCAGATTTCAATGGCTTTCAGCAGTTGTACAGCCTTGTGCAGTGCACAAGTTGTGTTACATGTCTTCGAGGAGCTATCGCGCAAATTCCAGTTTGTTGTAATGGAAAGCAAGGCGGTAGAGTTTTATTTCCTAGTTGTAATGTTCGATATGAAGTTTCTCCATTTTATACAACTGAAGCAGCCACACCTTCACCACCGCCACAACCTCTGACTCTTCCTCCCCCACCTCCAGGAAACGACAAAATCTCATCCTTAATCATAGTGGCCATTGTTGTCCCAATTGCCATAGTGCTTTTCTTGGTAGGCTGCTTTTTTCTAAGAAGAAAGACACAAAAAAAGTACGATGCTTTACGGGGACAGAATGGGGAGAATGAAATTACTAATGTGGAGTCATTGCAGTTTGATTTTGCAACAATTGAAGCAGCCACAAACCAGTTCTCTGTTAATAATAGATTAGGGGAAGGTGGCTTTGGAGAGGTTTACAAGGGAACACTTCCTAATGGGCAAGAAATAGCTGTGAAGAGGTTATCTAGAAGCTCTGGGCAAGGTGTCGTGGAATTTAAGAATGAGGTTGTTTTGGTAGCCAAGCTTCAGCACAGAAATTTAGTGAGGCTACTGGGATTTTGCTCGGAAGGAGAAGAAAAGATACTTATCTATGAATTTGTGCAGAACAAAAGCCTTGACAACTTTTTATTTGACTCGGATATTCAAGTAAAGTTGGATTGGTCAAGCAGATACAAGATTATAGGGGGGATTGCTCGAGGGATTCTCTATCTCCATCAAGATTCTCGGCTTAAAATCATACATCGCGATCTCAAAGCAAGCAACATATTGTTAGATGGAGAAATGAACCCAAAAATATCAGATTTTGGAATGGCAAGAATATTTGGAGTTGATCAAACTCAAGGAAGCACCAGAAGGATTGTCGGAACTTATGGTTACATGTCCCCAGAGTATGCAATGCATGGACAGTTCTCAGAGAAGTCTGATGTGTATAGTCTTGGTGTCTTAATCTTAGAGATTGTAACAGGCAAGAAAAACACTAGTTTCTATCAATCAGACCGTGGCGAAGATCTCTTAACATATGCTTGGAAACATTGGAGAGAAGGGACGGTGGAAGAATTGTTGGATTCAAATCTGAGATGTTCTTATTCAAGAAATGAAGTAATCAGATGTATCCATATTGGTTTACTGTGTGTTCAGGAAGATCCAAAGGAGAGACCTACTATGCAAACCATTGCTCTCATGCTAAGCAGTTACTCAGTTACCATGCCATTGCCTGAAAAGCCAGCGTTTTTCCTGCATAGTAAAGCAGAGTTGAACATGCCATCAGTAGCCACTAGCAGCTCAGTCTCATGTTCTGTTAATGAGGTTTCAATTACTGAATTATTCCCTCGATAA

Protein Analysis

494

Amino Acids

54.76

Weight (kDa)

7.49

Isoelectric Point (pI)

46.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 175 - 441 6.5e-46 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 176 - 442 7.2e-50 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000283)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G45860 AT4G05200 AT4G05200 AT4G11521 AT4G11530 AT4G23130 AT4G23130 AT4G23130 AT4G23140 AT4G23140 AT4G23150 AT4G23160 AT4G23170 AT4G23180 AT4G23180 AT4G23180 AT4G23230 AT4G23270 AT4G23270 AT4G23270 AT4G23280 AT4G23280 AT4G23280 AT4G23310 AT4G23310
fragaria_vesca FvH4_3g02772 FvH4_3g02772 FvH4_3g02773 FvH4_3g02773 FvH4_3g02774 FvH4_3g02800 FvH4_3g02820 FvH4_3g02820 FvH4_3g02830
malus_domestica MD00G1101900.v1.1 MD00G1102100.v1.1 MD00G1102200.v1.1 MD01G1098200.v1.1 MD05G1340000.v1.1 MD05G1340300.v1.1 MD07G1014100.v1.1 MD07G1014300.v1.1 MD07G1014400.v1.1 MD07G1014700.v1.1 MD10G1312900.v1.1 MD11G1022600.v1.1 MD11G1291500.v1.1 MD14G1207100.v1.1 MD16G1096600.v1.1
prunus_persica Prupe.4G027300_v2.0.a1 Prupe.4G027400_v2.0.a1 Prupe.4G027700_v2.0.a1 Prupe.4G027800_v2.0.a1
pyrus_communis pycom05g30960 pycom10g00940 pycom10g00950 pycom10g26430 pycom10g26450 pycom10g26460 pycom10g26470 pycom10g26480 pycom10g26490 pycom10g26500 pycom10g26510 pycom10g26570 pycom11g01820 pycom11g04000 pycom14g17130 pycom14g17140 pycom15g28820
rosa_chinensis RchiOBHm_Chr4g0408141 RchiOBHm_Chr5g0004211 RchiOBHm_Chr5g0004231 RchiOBHm_Chr5g0004241 RchiOBHm_Chr5g0004261
rosa_laevigata RLG00000008668 RLG00000008672 RLG00000031212 RLG00000031217
rosa_multiflora Rmu_co8162658.1_g000001 Rmu_co8336297.1_g000001 Rmu_sc0002073.1_g000001 Rmu_sc0004964.1_g000002 Rmu_sc0004964.1_g000003 Rmu_sc0004964.1_g000007 Rmu_sc0006006.1_g000007 Rmu_sc0007868.1_g000015 Rmu_sc0007868.1_g000016 Rmu_sc0007868.1_g000017 Rmu_sc0007868.1_g000021 Rmu_sc0007868.1_g000023 Rmu_sc0019654.1_g000002 Rmu_sc0038540.1_g000001
rosa_roxburghii Rroxscaffold_1G00071450 Rroxscaffold_1G00071460 Rroxscaffold_1G00071470 Rroxscaffold_1G00071560 Rroxscaffold_1G00071720 Rroxscaffold_1G00071770 Rroxscaffold_5G00352640
rosa_rugosa Rorug04G0083700 Rorug04G0410700 Rorug04G0410800 Rorug04G0410900
rosa_samantha Rh4BG145400 Rh4CG154900 Rh4DG141900 Rh5BG037500 Rh5BG037600 Rh5BG037700 Rh5CG041000 Rh5CG041100 Rh5CG041200 Rh5CG041300 Rh5CG041400 Rh5DG037100
rosa_wichuraiana Rw4G012130 Rw5G003450 Rw5G003460 Rw5G003470 Rw5G003480 Rw5G003640 Rw5G003660 Rw5G003670 Rw5G003680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 2 cut(s) 164, 894
AciI CCGC 2 cut(s) 198, 281
AclWI GGATC 1 cut(s) 1286
AcoI YGGCCR 1 cut(s) 348
AcsI RAATTY 4 cut(s) 168, 641, 685, 743
AcuI CTGAAG 2 cut(s) 279, 659
AfaI GTAC 2 cut(s) 113, 425
AfiI CCNNNNNNNGG 1 cut(s) 314
AflIII ACRYGT 2 cut(s) 143, 1026
AgsI TTSAA 8 cut(s) 45, 94, 503, 794, 1218, 1239, 1405, 1461
AhlI ACTAGT 1 cut(s) 1127
AjnI CCWGG 1 cut(s) 313
AjuI GAANNNNNNNTTGG 2 cut(s) 537, 569
AluBI AGCT 5 cut(s) 158, 599, 621, 673, 1431
AluI AGCT 5 cut(s) 158, 599, 621, 673, 1431
Alw21I GWGCWC 1 cut(s) 131
Alw26I GTCTC 2 cut(s) 1297, 1441
Alw44I GTGCAC 1 cut(s) 127
AlwI GGATC 1 cut(s) 1286
Ama87I CYCGRG 1 cut(s) 843
AoxI GGCC 1 cut(s) 348
ApaLI GTGCAC 1 cut(s) 127
ApeKI GCWGC 4 cut(s) 263, 390, 506, 1428
ApoI RAATTY 4 cut(s) 168, 641, 685, 743
AspLEI GCGC 2 cut(s) 52, 166
AsuHPI GGTGA 1 cut(s) 267
AvaI CYCGRG 1 cut(s) 843
BaeGI GKGCMC 1 cut(s) 131
BalI TGGCCA 1 cut(s) 350
BarI GAAGNNNNNNTAC 4 cut(s) 657, 689, 714, 746
BbsI GAAGAC 1 cut(s) 140
Bbv12I GWGCWC 1 cut(s) 131
BbvI GCAGC 4 cut(s) 275, 377, 518, 1440
BccI CCATC 3 cut(s) 870, 917, 1420
BciT130I CCWGG 1 cut(s) 315
BciVI GTATCC 1 cut(s) 1271
BclI TGATCA 1 cut(s) 979
BcoDI GTCTC 2 cut(s) 1297, 1441
BcuI ACTAGT 1 cut(s) 1127
BfaI CTAG 4 cut(s) 216, 615, 1128, 1425
BfuI GTATCC 1 cut(s) 1271
BglII AGATCT 1 cut(s) 1156
BisI GCNGC 4 cut(s) 264, 391, 507, 1429
BlpI GCTNAGC 1 cut(s) 1334
BlsI GCNGC 4 cut(s) 265, 392, 508, 1430
Bme1390I CCNGG 1 cut(s) 315
BmeT110I CYCGRG 1 cut(s) 843
BmiI GGNNCC 1 cut(s) 36
BmrFI CCNGG 1 cut(s) 315
BmrI ACTGGG 1 cut(s) 710
BmsI GCATC 1 cut(s) 418
BmuI ACTGGG 1 cut(s) 710
BpiI GAAGAC 1 cut(s) 140
BplI GAGNNNNNCTC 2 cut(s) 837, 869
BpmI CTGGAG 1 cut(s) 297
Bpu1102I GCTNAGC 1 cut(s) 1334
BpuEI CTTGAG 1 cut(s) 972
BsaBI GATNNNNATC 2 cut(s) 734, 1218
BsaI GGTCTC 1 cut(s) 1297
BsaJI CCNNGG 1 cut(s) 1147
BsaWI WCCGGW 1 cut(s) 56
BsaXI ACNNNNNCTCC 2 cut(s) 286, 316
Bsc4I CCNNNNNNNGG 1 cut(s) 314
Bse1I ACTGG 3 cut(s) 173, 517, 705
Bse3DI GCAATG 4 cut(s) 476, 1050, 1320, 1358
Bse8I GATNNNNATC 2 cut(s) 734, 1218
BseBI CCWGG 1 cut(s) 315
BseDI CCNNGG 1 cut(s) 1147
BseGI GGATG 1 cut(s) 332
BseJI GATNNNNATC 2 cut(s) 734, 1218
BseLI CCNNNNNNNGG 1 cut(s) 314
BseMI GCAATG 4 cut(s) 476, 1050, 1320, 1358
BseMII CTCAG 4 cut(s) 1074, 1214, 1359, 1446
BseNI ACTGG 3 cut(s) 173, 517, 705
BseRI GAGGAG 1 cut(s) 168
BseSI GKGCMC 1 cut(s) 131
BseXI GCAGC 4 cut(s) 275, 377, 518, 1440
BsgI GTGCAG 2 cut(s) 143, 770
Bsh1236I CGCG 2 cut(s) 164, 894
BshFI GGCC 1 cut(s) 350
BsiHKAI GWGCWC 1 cut(s) 131
BsiHKCI CYCGRG 1 cut(s) 843
BsiSI CCGG 2 cut(s) 38, 57
BslFI GGGAC 4 cut(s) 344, 453, 1015, 1207
BslI CCNNNNNNNGG 1 cut(s) 314
BsmAI GTCTC 2 cut(s) 1297, 1441
BsmFI GGGAC 4 cut(s) 344, 453, 1015, 1207
BsnI GGCC 1 cut(s) 350
Bso31I GGTCTC 1 cut(s) 1297
BsoBI CYCGRG 1 cut(s) 843
Bsp1286I GDGCHC 1 cut(s) 131
Bsp1407I TGTACA 1 cut(s) 111
Bsp143I GATC 4 cut(s) 895, 979, 1156, 1291
Bsp1720I GCTNAGC 1 cut(s) 1334
Bsp68I TCGCGA 1 cut(s) 894
BspACI CCGC 2 cut(s) 198, 281
BspANI GGCC 1 cut(s) 350
BspCNI CTCAG 4 cut(s) 1073, 1215, 1358, 1445
BspFNI CGCG 2 cut(s) 164, 894
BspLI GGNNCC 1 cut(s) 36
BspPI GGATC 1 cut(s) 1286
BspTNI GGTCTC 1 cut(s) 1297
BsrDI GCAATG 4 cut(s) 476, 1050, 1320, 1358
BsrGI TGTACA 1 cut(s) 111
BsrI ACTGG 3 cut(s) 173, 517, 705
BssECI CCNNGG 1 cut(s) 1147
BssMI GATC 4 cut(s) 895, 979, 1156, 1291
Bst2UI CCWGG 1 cut(s) 315
Bst4CI ACNGT 5 cut(s) 19, 1056, 1148, 1198, 1278
Bst6I CTCTTC 2 cut(s) 303, 599
BstAUI TGTACA 1 cut(s) 111
BstC8I GCNNGC 2 cut(s) 907, 1374
BstDEI CTNAG 7 cut(s) 401, 1060, 1099, 1223, 1334, 1345, 1432
BstDSI CCRYGG 1 cut(s) 1147
BstF5I GGATG 1 cut(s) 332
BstFNI CGCG 2 cut(s) 164, 894
BstHHI GCGC 2 cut(s) 52, 166
BstKTI GATC 4 cut(s) 898, 982, 1159, 1294
BstMAI GTCTC 2 cut(s) 1297, 1441
BstMBI GATC 4 cut(s) 895, 979, 1156, 1291
BstMWI GCNNNNNNNGC 2 cut(s) 47, 1369
BstNI CCWGG 1 cut(s) 315
BstNSI RCATGY 3 cut(s) 147, 1030, 1411
BstSCI CCNGG 1 cut(s) 313
BstSLI GKGCMC 1 cut(s) 131
BstUI CGCG 2 cut(s) 164, 894
BstV1I GCAGC 4 cut(s) 275, 377, 518, 1440
BstV2I GAAGAC 1 cut(s) 140
BstX2I RGATCY 2 cut(s) 1156, 1291
BstYI RGATCY 2 cut(s) 1156, 1291
BsuI GTATCC 1 cut(s) 1271
BsuRI GGCC 1 cut(s) 350
BtgI CCRYGG 1 cut(s) 1147
BtgZI GCGATG 1 cut(s) 875
BtsCI GGATG 1 cut(s) 332
BtsI GCAGTG 1 cut(s) 131
BtsIMutI CAGTG 1 cut(s) 131
BtuMI TCGCGA 1 cut(s) 894
Cac8I GCNNGC 2 cut(s) 907, 1374
CfoI GCGC 2 cut(s) 52, 166
Csp6I GTAC 2 cut(s) 112, 424
CviAII CATG 7 cut(s) 144, 1027, 1049, 1330, 1354, 1408, 1440
CviQI GTAC 2 cut(s) 112, 424
DdeI CTNAG 7 cut(s) 401, 1060, 1099, 1223, 1334, 1345, 1432
DpnI GATC 4 cut(s) 897, 981, 1158, 1293
DpnII GATC 4 cut(s) 895, 979, 1156, 1291
EaeI YGGCCR 1 cut(s) 348
Eam1104I CTCTTC 2 cut(s) 303, 599
EarI CTCTTC 2 cut(s) 303, 599
Eco31I GGTCTC 1 cut(s) 1297
Eco57I CTGAAG 2 cut(s) 279, 659
Eco88I CYCGRG 1 cut(s) 843
EcoRII CCWGG 1 cut(s) 313
EcoT22I ATGCAT 1 cut(s) 1050
FaeI CATG 7 cut(s) 147, 1030, 1052, 1333, 1357, 1411, 1443
FaqI GGGAC 4 cut(s) 344, 453, 1015, 1207
FatI CATG 7 cut(s) 143, 1026, 1048, 1329, 1353, 1407, 1439
FauNDI CATATG 1 cut(s) 1168
FbaI TGATCA 1 cut(s) 979
Fnu4HI GCNGC 4 cut(s) 264, 391, 507, 1429
FokI GGATG 1 cut(s) 319
Fsp4HI GCNGC 4 cut(s) 264, 391, 507, 1429
FspBI CTAG 4 cut(s) 216, 615, 1128, 1425
GlaI GCGC 2 cut(s) 51, 165
GluI GCNGC 4 cut(s) 264, 391, 507, 1429
GsuI CTGGAG 1 cut(s) 297
HaeIII GGCC 1 cut(s) 350
HapII CCGG 2 cut(s) 38, 57
HhaI GCGC 2 cut(s) 52, 166
Hin1II CATG 7 cut(s) 147, 1030, 1052, 1333, 1357, 1411, 1443
Hin6I GCGC 2 cut(s) 50, 164
HinP1I GCGC 2 cut(s) 50, 164
HindIII AAGCTT 1 cut(s) 671
HinfI GANTC 6 cut(s) 295, 473, 782, 850, 869, 1214
HpaII CCGG 2 cut(s) 38, 57
HphI GGTGA 1 cut(s) 267
Hpy166II GTNNAC 3 cut(s) 129, 565, 1274
Hpy188III TCNNGA 5 cut(s) 615, 866, 893, 1239, 1286
Hpy8I GTNNAC 3 cut(s) 129, 565, 1274
HpyAV CCTTC 5 cut(s) 282, 539, 710, 996, 1184
HpyCH4III ACNGT 5 cut(s) 19, 1056, 1148, 1198, 1278
HpyF10VI GCNNNNNNNGC 2 cut(s) 47, 1369
HpyF3I CTNAG 7 cut(s) 401, 1060, 1099, 1223, 1334, 1345, 1432
Hsp92II CATG 7 cut(s) 147, 1030, 1052, 1333, 1357, 1411, 1443
HspAI GCGC 2 cut(s) 50, 164
Ksp22I TGATCA 1 cut(s) 979
Kzo9I GATC 4 cut(s) 895, 979, 1156, 1291
LmnI GCTCC 2 cut(s) 40, 155
Lsp1109I GCAGC 4 cut(s) 275, 377, 518, 1440
LweI GCATC 1 cut(s) 418
MaeI CTAG 4 cut(s) 216, 615, 1128, 1425
MaeIII GTNAC 5 cut(s) 139, 1022, 1108, 1340, 1348
MalI GATC 4 cut(s) 897, 981, 1158, 1293
MboI GATC 4 cut(s) 895, 979, 1156, 1291
MboII GAAGA 8 cut(s) 140, 290, 417, 616, 734, 1166, 1214, 1301
MfeI CAATTG 2 cut(s) 363, 498
MflI RGATCY 2 cut(s) 1156, 1291
MhlI GDGCHC 1 cut(s) 131
MlsI TGGCCA 1 cut(s) 350
MluNI TGGCCA 1 cut(s) 350
MlyI GAGTC 3 cut(s) 289, 482, 776
MmeI TCCRAC 3 cut(s) 783, 991, 1191
Mox20I TGGCCA 1 cut(s) 350
Mph1103I ATGCAT 1 cut(s) 1050
MscI TGGCCA 1 cut(s) 350
MseI TTAA 7 cut(s) 338, 528, 645, 879, 1094, 1163, 1449
Msp20I TGGCCA 1 cut(s) 350
MspI CCGG 2 cut(s) 38, 57
MspR9I CCNGG 1 cut(s) 315
MunI CAATTG 2 cut(s) 363, 498
MvaI CCWGG 1 cut(s) 315
MvnI CGCG 2 cut(s) 164, 894
MwoI GCNNNNNNNGC 2 cut(s) 47, 1369
NdeI CATATG 1 cut(s) 1168
NdeII GATC 4 cut(s) 895, 979, 1156, 1291
NlaIII CATG 7 cut(s) 147, 1030, 1052, 1333, 1357, 1411, 1443
NlaIV GGNNCC 1 cut(s) 36
NmeAIII GCCGAG 1 cut(s) 853
NruI TCGCGA 1 cut(s) 894
NsiI ATGCAT 1 cut(s) 1050
NspI RCATGY 3 cut(s) 147, 1030, 1411
PaeR7I CTCGAG 1 cut(s) 843
PciI ACATGT 2 cut(s) 143, 1026
PfeI GAWTC 3 cut(s) 850, 869, 1214
PfoI TCCNGGA 1 cut(s) 313
PkrI GCNGC 4 cut(s) 265, 392, 508, 1430
PleI GAGTC 3 cut(s) 289, 481, 776
PpsI GAGTC 3 cut(s) 289, 481, 776
PscI ACATGT 2 cut(s) 143, 1026
Psp6I CCWGG 1 cut(s) 313
PspGI CCWGG 1 cut(s) 313
PspN4I GGNNCC 1 cut(s) 36
PspXI VCTCGAGB 1 cut(s) 843
PsuI RGATCY 2 cut(s) 1156, 1291
RruI TCGCGA 1 cut(s) 894
RsaI GTAC 2 cut(s) 113, 425
RsaNI GTAC 2 cut(s) 112, 424
SaqAI TTAA 7 cut(s) 338, 528, 645, 879, 1094, 1163, 1449
SatI GCNGC 4 cut(s) 264, 391, 507, 1429
Sau3AI GATC 4 cut(s) 895, 979, 1156, 1291
SchI GAGTC 3 cut(s) 289, 482, 776
ScrFI CCNGG 1 cut(s) 315
SduI GDGCHC 1 cut(s) 131
SfaNI GCATC 1 cut(s) 418
Sfr274I CTCGAG 1 cut(s) 843
SlaI CTCGAG 1 cut(s) 843
SmlI CTYRAG 2 cut(s) 843, 987
SmoI CTYRAG 2 cut(s) 843, 987
SpeI ACTAGT 1 cut(s) 1127
SsiI CCGC 2 cut(s) 198, 281
SspI AATATT 1 cut(s) 969
SspMI CTAG 4 cut(s) 216, 615, 1128, 1425
StyD4I CCNGG 1 cut(s) 313
TaaI ACNGT 5 cut(s) 19, 1056, 1148, 1198, 1278
TaqI TCGA 4 cut(s) 151, 229, 844, 1480
TatI WGTACW 1 cut(s) 111
TfiI GAWTC 3 cut(s) 850, 869, 1214
Tru1I TTAA 7 cut(s) 338, 528, 645, 879, 1094, 1163, 1449
Tru9I TTAA 7 cut(s) 338, 528, 645, 879, 1094, 1163, 1449
TscAI CASTG 1 cut(s) 131
TseI GCWGC 4 cut(s) 263, 390, 506, 1428
TspDTI ATGAA 5 cut(s) 249, 471, 756, 947, 1260
TspRI CASTG 1 cut(s) 131
VneI GTGCAC 1 cut(s) 127
XapI RAATTY 4 cut(s) 168, 641, 685, 743
XbaI TCTAGA 1 cut(s) 614
XceI RCATGY 3 cut(s) 147, 1030, 1411
XhoI CTCGAG 1 cut(s) 843
XspI CTAG 4 cut(s) 216, 615, 1128, 1425
Zsp2I ATGCAT 1 cut(s) 1050
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.