Cysteine-rich receptor-like protein kinase
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Stress-antifung | PF01657 | 29 - 125 | 1.8e-28 | Salt stress response/antifungal |
| Stress-antifung | PF01657 | 147 - 236 | 1e-11 | Salt stress response/antifungal |
| PK_Tyr_Ser-Thr | PF07714 | 334 - 540 | 1e-44 | Protein tyrosine and serine/threonine kinase |
| Pkinase | PF00069 | 335 - 535 | 2.3e-44 | Protein kinase domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 720 |
| AatII | GACGTC | 2 cut(s) | 255, 731 |
| AccB1I | GGYRCC | 2 cut(s) | 739, 745 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 466 |
| AccI | GTMKAC | 1 cut(s) | 593 |
| AccII | CGCG | 4 cut(s) | 174, 246, 524, 1371 |
| AclWI | GGATC | 3 cut(s) | 7, 1646, 1795 |
| AcoI | YGGCCR | 3 cut(s) | 202, 489, 822 |
| AcsI | RAATTY | 3 cut(s) | 634, 1162, 1220 |
| AcuI | CTGAAG | 2 cut(s) | 1136, 1212 |
| AcyI | GRCGYC | 5 cut(s) | 219, 252, 728, 740, 746 |
| AfaI | GTAC | 7 cut(s) | 208, 344, 563, 701, 905, 915, 1556 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 31, 466, 749 |
| AflIII | ACRYGT | 1 cut(s) | 1503 |
| AgeI | ACCGGT | 1 cut(s) | 450 |
| AgsI | TTSAA | 4 cut(s) | 457, 980, 1271, 1842 |
| AhlI | ACTAGT | 1 cut(s) | 1604 |
| AjnI | CCWGG | 3 cut(s) | 459, 748, 806 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 362, 394, 1014, 1046 |
| AluBI | AGCT | 8 cut(s) | 48, 558, 567, 1076, 1098, 1150, 1812, 1838 |
| AluI | AGCT | 8 cut(s) | 48, 558, 567, 1076, 1098, 1150, 1812, 1838 |
| Alw21I | GWGCWC | 2 cut(s) | 581, 779 |
| Alw26I | GTCTC | 3 cut(s) | 317, 1657, 1822 |
| Alw44I | GTGCAC | 1 cut(s) | 577 |
| AlwI | GGATC | 3 cut(s) | 7, 1646, 1795 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 276 |
| AoxI | GGCC | 4 cut(s) | 202, 229, 489, 822 |
| ApaLI | GTGCAC | 1 cut(s) | 577 |
| ApeKI | GCWGC | 6 cut(s) | 312, 438, 648, 842, 983, 1809 |
| ApoI | RAATTY | 3 cut(s) | 634, 1162, 1220 |
| AsiGI | ACCGGT | 1 cut(s) | 450 |
| AspLEI | GCGC | 3 cut(s) | 312, 742, 748 |
| AspS9I | GGNCC | 2 cut(s) | 375, 448 |
| AsuC2I | CCSGG | 2 cut(s) | 317, 1102 |
| AsuHPI | GGTGA | 4 cut(s) | 28, 97, 247, 260 |
| AsuNHI | GCTAGC | 1 cut(s) | 473 |
| AvaII | GGWCC | 2 cut(s) | 375, 448 |
| BaeGI | GKGCMC | 1 cut(s) | 581 |
| BalI | TGGCCA | 2 cut(s) | 491, 824 |
| BanI | GGYRCC | 2 cut(s) | 739, 745 |
| BanII | GRGCYC | 1 cut(s) | 757 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1191, 1223 |
| BbsI | GAAGAC | 1 cut(s) | 94 |
| Bbv12I | GWGCWC | 2 cut(s) | 581, 779 |
| BbvI | GCAGC | 6 cut(s) | 299, 450, 635, 854, 995, 1821 |
| BccI | CCATC | 3 cut(s) | 1347, 1394, 1780 |
| BceAI | ACGGC | 4 cut(s) | 189, 244, 526, 815 |
| BciT130I | CCWGG | 3 cut(s) | 461, 750, 808 |
| BciVI | GTATCC | 1 cut(s) | 690 |
| BclI | TGATCA | 1 cut(s) | 1456 |
| BcnI | CCSGG | 2 cut(s) | 317, 1102 |
| BcoDI | GTCTC | 3 cut(s) | 317, 1657, 1822 |
| BcuI | ACTAGT | 1 cut(s) | 1604 |
| BfaI | CTAG | 4 cut(s) | 474, 1092, 1605, 1806 |
| BfoI | RGCGCY | 3 cut(s) | 313, 743, 749 |
| BfuI | GTATCC | 1 cut(s) | 690 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 497 |
| BglII | AGATCT | 1 cut(s) | 1633 |
| BlpI | GCTNAGC | 2 cut(s) | 44, 1694 |
| Bme1390I | CCNGG | 5 cut(s) | 317, 461, 750, 808, 1102 |
| Bme18I | GGWCC | 2 cut(s) | 375, 448 |
| BmgT120I | GGNCC | 2 cut(s) | 375, 448 |
| BmiI | GGNNCC | 4 cut(s) | 422, 625, 741, 747 |
| BmrFI | CCNGG | 5 cut(s) | 317, 461, 750, 808, 1102 |
| BmrI | ACTGGG | 1 cut(s) | 1187 |
| BmtI | GCTAGC | 1 cut(s) | 477 |
| BmuI | ACTGGG | 1 cut(s) | 1187 |
| BpiI | GAAGAC | 1 cut(s) | 94 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1314, 1346 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 44, 1694 |
| BpuEI | CTTGAG | 1 cut(s) | 1449 |
| BpuMI | CCSGG | 2 cut(s) | 317, 1102 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1211 |
| BsaHI | GRCGYC | 5 cut(s) | 219, 252, 728, 740, 746 |
| BsaI | GGTCTC | 1 cut(s) | 1657 |
| BsaJI | CCNNGG | 5 cut(s) | 244, 297, 492, 749, 1624 |
| BsaWI | WCCGGW | 1 cut(s) | 450 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 131, 161, 182, 212 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 31, 466, 749 |
| Bse118I | RCCGGY | 4 cut(s) | 179, 450, 736, 742 |
| Bse1I | ACTGG | 3 cut(s) | 124, 994, 1182 |
| Bse3DI | GCAATG | 4 cut(s) | 627, 825, 953, 1527 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1211 |
| BseBI | CCWGG | 3 cut(s) | 461, 750, 808 |
| BseDI | CCNNGG | 5 cut(s) | 244, 297, 492, 749, 1624 |
| BseJI | GATNNNNATC | 1 cut(s) | 1211 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 31, 466, 749 |
| BseMI | GCAATG | 4 cut(s) | 627, 825, 953, 1527 |
| BseMII | CTCAG | 3 cut(s) | 1551, 1719, 1827 |
| BseNI | ACTGG | 3 cut(s) | 124, 994, 1182 |
| BseRI | GAGGAG | 3 cut(s) | 134, 148, 1130 |
| BseSI | GKGCMC | 1 cut(s) | 581 |
| BseX3I | CGGCCG | 1 cut(s) | 202 |
| BseXI | GCAGC | 6 cut(s) | 299, 450, 635, 854, 995, 1821 |
| Bsh1236I | CGCG | 4 cut(s) | 174, 246, 524, 1371 |
| Bsh1285I | CGRYCG | 2 cut(s) | 205, 321 |
| BshFI | GGCC | 4 cut(s) | 204, 231, 491, 824 |
| BshNI | GGYRCC | 2 cut(s) | 739, 745 |
| BshTI | ACCGGT | 1 cut(s) | 450 |
| BsiEI | CGRYCG | 2 cut(s) | 205, 321 |
| BsiHKAI | GWGCWC | 2 cut(s) | 581, 779 |
| BsiSI | CCGG | 7 cut(s) | 180, 201, 317, 451, 737, 743, 1101 |
| BslFI | GGGAC | 3 cut(s) | 374, 681, 1492 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 31, 466, 749 |
| BsmAI | GTCTC | 3 cut(s) | 317, 1657, 1822 |
| BsmFI | GGGAC | 3 cut(s) | 374, 681, 1492 |
| BsnI | GGCC | 4 cut(s) | 204, 231, 491, 824 |
| Bso31I | GGTCTC | 1 cut(s) | 1657 |
| Bsp1286I | GDGCHC | 3 cut(s) | 581, 757, 779 |
| Bsp1407I | TGTACA | 2 cut(s) | 561, 1554 |
| Bsp143I | GATC | 7 cut(s) | 12, 864, 1372, 1456, 1633, 1651, 1787 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 44, 1694 |
| Bsp68I | TCGCGA | 2 cut(s) | 524, 1371 |
| BspANI | GGCC | 4 cut(s) | 204, 231, 491, 824 |
| BspCNI | CTCAG | 3 cut(s) | 1550, 1718, 1826 |
| BspFNI | CGCG | 4 cut(s) | 174, 246, 524, 1371 |
| BspLI | GGNNCC | 4 cut(s) | 422, 625, 741, 747 |
| BspOI | GCTAGC | 1 cut(s) | 477 |
| BspPI | GGATC | 3 cut(s) | 7, 1646, 1795 |
| BspQI | GCTCTTC | 1 cut(s) | 788 |
| BspT107I | GGYRCC | 2 cut(s) | 739, 745 |
| BspTNI | GGTCTC | 1 cut(s) | 1657 |
| BsrDI | GCAATG | 4 cut(s) | 627, 825, 953, 1527 |
| BsrFI | RCCGGY | 4 cut(s) | 179, 450, 736, 742 |
| BsrGI | TGTACA | 2 cut(s) | 561, 1554 |
| BsrI | ACTGG | 3 cut(s) | 124, 994, 1182 |
| BssAI | RCCGGY | 4 cut(s) | 179, 450, 736, 742 |
| BssECI | CCNNGG | 5 cut(s) | 244, 297, 492, 749, 1624 |
| BssMI | GATC | 7 cut(s) | 12, 864, 1372, 1456, 1633, 1651, 1787 |
| BssNI | GRCGYC | 5 cut(s) | 219, 252, 728, 740, 746 |
| Bst2UI | CCWGG | 3 cut(s) | 461, 750, 808 |
| Bst4CI | ACNGT | 7 cut(s) | 100, 612, 781, 946, 1533, 1559, 1625 |
| Bst6I | CTCTTC | 4 cut(s) | 26, 239, 788, 1076 |
| BstACI | GRCGYC | 5 cut(s) | 219, 252, 728, 740, 746 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 276 |
| BstAUI | TGTACA | 2 cut(s) | 561, 1554 |
| BstC8I | GCNNGC | 7 cut(s) | 277, 356, 475, 581, 744, 1384, 1734 |
| BstDEI | CTNAG | 7 cut(s) | 44, 885, 1537, 1576, 1694, 1705, 1813 |
| BstDSI | CCRYGG | 3 cut(s) | 244, 492, 1624 |
| BstEII | GGTNACC | 1 cut(s) | 34 |
| BstFNI | CGCG | 4 cut(s) | 174, 246, 524, 1371 |
| BstH2I | RGCGCY | 3 cut(s) | 313, 743, 749 |
| BstHHI | GCGC | 3 cut(s) | 312, 742, 748 |
| BstKTI | GATC | 7 cut(s) | 15, 867, 1375, 1459, 1636, 1654, 1790 |
| BstMAI | GTCTC | 3 cut(s) | 317, 1657, 1822 |
| BstMBI | GATC | 7 cut(s) | 12, 864, 1372, 1456, 1633, 1651, 1787 |
| BstMCI | CGRYCG | 2 cut(s) | 205, 321 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 180, 276, 360, 497, 564, 580, 752, 1729 |
| BstNI | CCWGG | 3 cut(s) | 461, 750, 808 |
| BstNSI | RCATGY | 3 cut(s) | 358, 1507, 1771 |
| BstPI | GGTNACC | 1 cut(s) | 34 |
| BstSCI | CCNGG | 5 cut(s) | 315, 459, 748, 806, 1100 |
| BstSLI | GKGCMC | 1 cut(s) | 581 |
| BstUI | CGCG | 4 cut(s) | 174, 246, 524, 1371 |
| BstV1I | GCAGC | 6 cut(s) | 299, 450, 635, 854, 995, 1821 |
| BstV2I | GAAGAC | 1 cut(s) | 94 |
| BstX2I | RGATCY | 2 cut(s) | 1633, 1651 |
| BstYI | RGATCY | 2 cut(s) | 1633, 1651 |
| BstZI | CGGCCG | 1 cut(s) | 202 |
| BsuI | GTATCC | 1 cut(s) | 690 |
| BsuRI | GGCC | 4 cut(s) | 204, 231, 491, 824 |
| BtgI | CCRYGG | 3 cut(s) | 244, 492, 1624 |
| BtgZI | GCGATG | 1 cut(s) | 1352 |
| BtsI | GCAGTG | 1 cut(s) | 581 |
| BtsIMutI | CAGTG | 3 cut(s) | 36, 581, 786 |
| BtuMI | TCGCGA | 2 cut(s) | 524, 1371 |
| Cac8I | GCNNGC | 7 cut(s) | 277, 356, 475, 581, 744, 1384, 1734 |
| CaiI | CAGNNNCTG | 1 cut(s) | 276 |
| CfoI | GCGC | 3 cut(s) | 312, 742, 748 |
| Cfr10I | RCCGGY | 4 cut(s) | 179, 450, 736, 742 |
| Cfr13I | GGNCC | 2 cut(s) | 375, 448 |
| Cfr42I | CCGCGG | 1 cut(s) | 247 |
| CpoI | CGGWCCG | 1 cut(s) | 448 |
| CseI | GACGC | 1 cut(s) | 227 |
| CsiI | ACCWGGT | 1 cut(s) | 459 |
| Csp6I | GTAC | 7 cut(s) | 207, 343, 562, 700, 904, 914, 1555 |
| CspAI | ACCGGT | 1 cut(s) | 450 |
| CspI | CGGWCCG | 1 cut(s) | 448 |
| CviAII | CATG | 7 cut(s) | 355, 415, 478, 1504, 1526, 1690, 1768 |
| CviQI | GTAC | 7 cut(s) | 207, 343, 562, 700, 904, 914, 1555 |
| DdeI | CTNAG | 7 cut(s) | 44, 885, 1537, 1576, 1694, 1705, 1813 |
| DinI | GGCGCC | 2 cut(s) | 741, 747 |
| DpnI | GATC | 7 cut(s) | 14, 866, 1374, 1458, 1635, 1653, 1789 |
| DpnII | GATC | 7 cut(s) | 12, 864, 1372, 1456, 1633, 1651, 1787 |
| DraI | TTTAAA | 1 cut(s) | 1123 |
| EaeI | YGGCCR | 3 cut(s) | 202, 489, 822 |
| EagI | CGGCCG | 1 cut(s) | 202 |
| Eam1104I | CTCTTC | 4 cut(s) | 26, 239, 788, 1076 |
| EarI | CTCTTC | 4 cut(s) | 26, 239, 788, 1076 |
| EciI | GGCGGA | 1 cut(s) | 759 |
| EclXI | CGGCCG | 1 cut(s) | 202 |
| Eco24I | GRGCYC | 1 cut(s) | 757 |
| Eco31I | GGTCTC | 1 cut(s) | 1657 |
| Eco47I | GGWCC | 2 cut(s) | 375, 448 |
| Eco52I | CGGCCG | 1 cut(s) | 202 |
| Eco57I | CTGAAG | 2 cut(s) | 1136, 1212 |
| Eco91I | GGTNACC | 1 cut(s) | 34 |
| EcoO109I | RGGNCCY | 1 cut(s) | 375 |
| EcoO65I | GGTNACC | 1 cut(s) | 34 |
| EcoRII | CCWGG | 3 cut(s) | 459, 748, 806 |
| EcoT22I | ATGCAT | 1 cut(s) | 1527 |
| EcoT38I | GRGCYC | 1 cut(s) | 757 |
| EgeI | GGCGCC | 2 cut(s) | 741, 747 |
| EheI | GGCGCC | 2 cut(s) | 741, 747 |
| FaeI | CATG | 7 cut(s) | 358, 418, 481, 1507, 1529, 1693, 1771 |
| FalI | AAGNNNNNCTT | 1 cut(s) | 32 |
| FaqI | GGGAC | 3 cut(s) | 374, 681, 1492 |
| FatI | CATG | 7 cut(s) | 354, 414, 477, 1503, 1525, 1689, 1767 |
| FauI | CCCGC | 2 cut(s) | 400, 647 |
| FauNDI | CATATG | 1 cut(s) | 1645 |
| FbaI | TGATCA | 1 cut(s) | 1456 |
| FblI | GTMKAC | 1 cut(s) | 593 |
| FriOI | GRGCYC | 1 cut(s) | 757 |
| FspBI | CTAG | 4 cut(s) | 474, 1092, 1605, 1806 |
| GlaI | GCGC | 3 cut(s) | 311, 741, 747 |
| HaeII | RGCGCY | 3 cut(s) | 313, 743, 749 |
| HaeIII | GGCC | 4 cut(s) | 204, 231, 491, 824 |
| HapII | CCGG | 7 cut(s) | 180, 201, 317, 451, 737, 743, 1101 |
| HgaI | GACGC | 1 cut(s) | 227 |
| HhaI | GCGC | 3 cut(s) | 312, 742, 748 |
| Hin1I | GRCGYC | 5 cut(s) | 219, 252, 728, 740, 746 |
| Hin1II | CATG | 7 cut(s) | 358, 418, 481, 1507, 1529, 1693, 1771 |
| Hin6I | GCGC | 3 cut(s) | 310, 740, 746 |
| HinP1I | GCGC | 3 cut(s) | 310, 740, 746 |
| HindIII | AAGCTT | 3 cut(s) | 46, 1148, 1836 |
| HinfI | GANTC | 6 cut(s) | 398, 950, 1259, 1327, 1346, 1411 |
| HpaII | CCGG | 7 cut(s) | 180, 201, 317, 451, 737, 743, 1101 |
| HphI | GGTGA | 4 cut(s) | 28, 97, 247, 260 |
| Hpy166II | GTNNAC | 4 cut(s) | 579, 594, 1042, 1555 |
| Hpy188III | TCNNGA | 6 cut(s) | 322, 523, 1092, 1343, 1370, 1785 |
| Hpy8I | GTNNAC | 4 cut(s) | 579, 594, 1042, 1555 |
| Hpy99I | CGWCG | 4 cut(s) | 221, 512, 529, 730 |
| HpyAV | CCTTC | 6 cut(s) | 26, 130, 388, 1016, 1187, 1473 |
| HpyCH4III | ACNGT | 7 cut(s) | 100, 612, 781, 946, 1533, 1559, 1625 |
| HpyCH4IV | ACGT | 3 cut(s) | 252, 432, 728 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 180, 276, 360, 497, 564, 580, 752, 1729 |
| HpyF3I | CTNAG | 7 cut(s) | 44, 885, 1537, 1576, 1694, 1705, 1813 |
| HpySE526I | ACGT | 3 cut(s) | 252, 432, 728 |
| Hsp92I | GRCGYC | 5 cut(s) | 219, 252, 728, 740, 746 |
| Hsp92II | CATG | 7 cut(s) | 358, 418, 481, 1507, 1529, 1693, 1771 |
| HspAI | GCGC | 3 cut(s) | 310, 740, 746 |
| KasI | GGCGCC | 2 cut(s) | 739, 745 |
| KroI | GCCGGC | 1 cut(s) | 742 |
| KroNI | GCCGGC | 1 cut(s) | 744 |
| Ksp22I | TGATCA | 1 cut(s) | 1456 |
| KspI | CCGCGG | 1 cut(s) | 247 |
| Kzo9I | GATC | 7 cut(s) | 12, 864, 1372, 1456, 1633, 1651, 1787 |
| LguI | GCTCTTC | 1 cut(s) | 788 |
| LmnI | GCTCC | 2 cut(s) | 623, 1103 |
| Lsp1109I | GCAGC | 6 cut(s) | 299, 450, 635, 854, 995, 1821 |
| MabI | ACCWGGT | 1 cut(s) | 459 |
| MaeI | CTAG | 4 cut(s) | 474, 1092, 1605, 1806 |
| MaeII | ACGT | 3 cut(s) | 252, 432, 728 |
| MaeIII | GTNAC | 9 cut(s) | 34, 248, 253, 280, 781, 1499, 1585, 1700, 1708 |
| MalI | GATC | 7 cut(s) | 14, 866, 1374, 1458, 1635, 1653, 1789 |
| MboI | GATC | 7 cut(s) | 12, 864, 1372, 1456, 1633, 1651, 1787 |
| MboII | GAAGA | 9 cut(s) | 13, 94, 226, 373, 805, 1093, 1211, 1643, 1661 |
| MfeI | CAATTG | 2 cut(s) | 837, 975 |
| MflI | RGATCY | 2 cut(s) | 1633, 1651 |
| MhlI | GDGCHC | 3 cut(s) | 581, 757, 779 |
| MlsI | TGGCCA | 2 cut(s) | 491, 824 |
| MluCI | AATT | 8 cut(s) | 634, 837, 936, 975, 1162, 1220, 1842, 1850 |
| MluNI | TGGCCA | 2 cut(s) | 491, 824 |
| Mly113I | GGCGCC | 2 cut(s) | 740, 746 |
| MlyI | GAGTC | 3 cut(s) | 407, 959, 1253 |
| MmeI | TCCRAC | 7 cut(s) | 77, 153, 186, 393, 1260, 1468, 1743 |
| Mox20I | TGGCCA | 2 cut(s) | 491, 824 |
| Mph1103I | ATGCAT | 1 cut(s) | 1527 |
| MreI | CGCCGGCG | 1 cut(s) | 742 |
| MroNI | GCCGGC | 1 cut(s) | 742 |
| MscI | TGGCCA | 2 cut(s) | 491, 824 |
| MseI | TTAA | 6 cut(s) | 1005, 1122, 1356, 1571, 1640, 1830 |
| Msp20I | TGGCCA | 2 cut(s) | 491, 824 |
| MspA1I | CMGCKG | 2 cut(s) | 246, 263 |
| MspI | CCGG | 7 cut(s) | 180, 201, 317, 451, 737, 743, 1101 |
| MspR9I | CCNGG | 5 cut(s) | 317, 461, 750, 808, 1102 |
| MunI | CAATTG | 2 cut(s) | 837, 975 |
| MvaI | CCWGG | 3 cut(s) | 461, 750, 808 |
| MvnI | CGCG | 4 cut(s) | 174, 246, 524, 1371 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 180, 276, 360, 497, 564, 580, 752, 1729 |
| NaeI | GCCGGC | 1 cut(s) | 744 |
| NarI | GGCGCC | 2 cut(s) | 740, 746 |
| NciI | CCSGG | 2 cut(s) | 317, 1102 |
| NdeI | CATATG | 1 cut(s) | 1645 |
| NdeII | GATC | 7 cut(s) | 12, 864, 1372, 1456, 1633, 1651, 1787 |
| NgoMIV | GCCGGC | 1 cut(s) | 742 |
| NheI | GCTAGC | 1 cut(s) | 473 |
| NlaIII | CATG | 7 cut(s) | 358, 418, 481, 1507, 1529, 1693, 1771 |
| NlaIV | GGNNCC | 4 cut(s) | 422, 625, 741, 747 |
| NmeAIII | GCCGAG | 4 cut(s) | 421, 666, 798, 1330 |
| NmuCI | GTSAC | 5 cut(s) | 34, 248, 253, 280, 781 |
| NruI | TCGCGA | 2 cut(s) | 524, 1371 |
| NsiI | ATGCAT | 1 cut(s) | 1527 |
| NspI | RCATGY | 3 cut(s) | 358, 1507, 1771 |
| PaeI | GCATGC | 1 cut(s) | 358 |
| PciI | ACATGT | 1 cut(s) | 1503 |
| PciSI | GCTCTTC | 1 cut(s) | 788 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 171, 438, 533 |
| PdiI | GCCGGC | 1 cut(s) | 744 |
| PfeI | GAWTC | 3 cut(s) | 1327, 1346, 1411 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 466 |
| PfoI | TCCNGGA | 1 cut(s) | 806 |
| PinAI | ACCGGT | 1 cut(s) | 450 |
| PleI | GAGTC | 3 cut(s) | 406, 958, 1253 |
| PluTI | GGCGCC | 2 cut(s) | 743, 749 |
| PpsI | GAGTC | 3 cut(s) | 406, 958, 1253 |
| PpuMI | RGGWCCY | 1 cut(s) | 375 |
| PscI | ACATGT | 1 cut(s) | 1503 |
| PsiI | TTATAA | 1 cut(s) | 720 |
| Psp5II | RGGWCCY | 1 cut(s) | 375 |
| Psp6I | CCWGG | 3 cut(s) | 459, 748, 806 |
| PspEI | GGTNACC | 1 cut(s) | 34 |
| PspGI | CCWGG | 3 cut(s) | 459, 748, 806 |
| PspN4I | GGNNCC | 4 cut(s) | 422, 625, 741, 747 |
| PspPI | GGNCC | 2 cut(s) | 375, 448 |
| PspPPI | RGGWCCY | 1 cut(s) | 375 |
| PstNI | CAGNNNCTG | 1 cut(s) | 276 |
| PsuI | RGATCY | 2 cut(s) | 1633, 1651 |
| RruI | TCGCGA | 2 cut(s) | 524, 1371 |
| RsaI | GTAC | 7 cut(s) | 208, 344, 563, 701, 905, 915, 1556 |
| RsaNI | GTAC | 7 cut(s) | 207, 343, 562, 700, 904, 914, 1555 |
| Rsr2I | CGGWCCG | 1 cut(s) | 448 |
| RsrII | CGGWCCG | 1 cut(s) | 448 |
| SacII | CCGCGG | 1 cut(s) | 247 |
| SapI | GCTCTTC | 1 cut(s) | 788 |
| SaqAI | TTAA | 6 cut(s) | 1005, 1122, 1356, 1571, 1640, 1830 |
| Sau3AI | GATC | 7 cut(s) | 12, 864, 1372, 1456, 1633, 1651, 1787 |
| Sau96I | GGNCC | 2 cut(s) | 375, 448 |
| SchI | GAGTC | 3 cut(s) | 407, 959, 1253 |
| ScrFI | CCNGG | 5 cut(s) | 317, 461, 750, 808, 1102 |
| SduI | GDGCHC | 3 cut(s) | 581, 757, 779 |
| SexAI | ACCWGGT | 1 cut(s) | 459 |
| SfoI | GGCGCC | 2 cut(s) | 741, 747 |
| Sfr303I | CCGCGG | 1 cut(s) | 247 |
| SgrAI | CRCCGGYG | 2 cut(s) | 736, 742 |
| SgrBI | CCGCGG | 1 cut(s) | 247 |
| SinI | GGWCC | 2 cut(s) | 375, 448 |
| SmlI | CTYRAG | 1 cut(s) | 1464 |
| SmoI | CTYRAG | 1 cut(s) | 1464 |
| SpeI | ACTAGT | 1 cut(s) | 1604 |
| SphI | GCATGC | 1 cut(s) | 358 |
| Sse9I | AATT | 8 cut(s) | 634, 837, 936, 975, 1162, 1220, 1842, 1850 |
| SspDI | GGCGCC | 2 cut(s) | 739, 745 |
| SspI | AATATT | 1 cut(s) | 1446 |
| SspMI | CTAG | 4 cut(s) | 474, 1092, 1605, 1806 |
| StyD4I | CCNGG | 5 cut(s) | 315, 459, 748, 806, 1100 |
| TaaI | ACNGT | 7 cut(s) | 100, 612, 781, 946, 1533, 1559, 1625 |
| TaiI | ACGT | 3 cut(s) | 255, 435, 731 |
| TaqI | TCGA | 4 cut(s) | 321, 725, 757, 1861 |
| TasI | AATT | 8 cut(s) | 634, 837, 936, 975, 1162, 1220, 1842, 1850 |
| TatI | WGTACW | 3 cut(s) | 561, 903, 1554 |
| TauI | GCSGC | 5 cut(s) | 224, 246, 310, 473, 654 |
| TfiI | GAWTC | 3 cut(s) | 1327, 1346, 1411 |
| Tru1I | TTAA | 6 cut(s) | 1005, 1122, 1356, 1571, 1640, 1830 |
| Tru9I | TTAA | 6 cut(s) | 1005, 1122, 1356, 1571, 1640, 1830 |
| TscAI | CASTG | 3 cut(s) | 36, 581, 786 |
| TseFI | GTSAC | 5 cut(s) | 34, 248, 253, 280, 781 |
| TseI | GCWGC | 6 cut(s) | 312, 438, 648, 842, 983, 1809 |
| Tsp45I | GTSAC | 5 cut(s) | 34, 248, 253, 280, 781 |
| TspDTI | ATGAA | 6 cut(s) | 403, 948, 1233, 1424, 1662, 1848 |
| TspGWI | ACGGA | 4 cut(s) | 74, 461, 497, 509 |
| TspRI | CASTG | 3 cut(s) | 36, 581, 786 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 466 |
| VneI | GTGCAC | 1 cut(s) | 577 |
| VpaK11BI | GGWCC | 2 cut(s) | 375, 448 |
| XapI | RAATTY | 3 cut(s) | 634, 1162, 1220 |
| XbaI | TCTAGA | 1 cut(s) | 1091 |
| XceI | RCATGY | 3 cut(s) | 358, 1507, 1771 |
| XmiI | GTMKAC | 1 cut(s) | 593 |
| XspI | CTAG | 4 cut(s) | 474, 1092, 1605, 1806 |
| ZraI | GACGTC | 2 cut(s) | 253, 729 |
| Zsp2I | ATGCAT | 1 cut(s) | 1527 |