Rmu_sc0007868.1_g000017

Cysteine-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0007868.1
Physical Location & Seq
Forward (+)
59311 .. 61330
2020 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0007868.1_g000017.1.cds

Sequence Viewer

Length: 1071 bp
atgtggatccggatcggcgaatgtgatgaactttggcgacggcgatggatagtggcacgaccatatgggttttgtagatcggctcaccctcgagccattggtgtaggcgtagtgagaatggacgaagctcctcgagtttccatgtggaacattgggaatatcactgaccctacccgctttacgcagctggtggcagaaacaatcaatggcttggtggctccggcttcaactgaaccctccggtgctaaaaagtatgcaacaaaagaagcagctttcaatgggtttcagcagttgtacagccttgtgcagtgcacaccagacctatcaagcacaagttgtgttacatgtcttcgaggagctattgcgcaacttccaggttgttgtactggaaagcaaggcggtagagttttatatcctagttgtaatgttcgatatgaagtttatccattttatacagctgaggcagccacaccttcatcaccgccacaacctttgactcttcctcccccacctccaggaaacgacaaaatctcatccctaatcatagtggccattgttgttccaattgccatagtgcttttcttgtttgattttgctacaattgaagcagccacaaaccagttttctgttaataacagattaggggaaggtggctttggagaggtttacaagggaacacttcctaatgggcaagaagtagctgtgaagaggttatctagaagctccgggcaaggtgttgaggagtttaaaaatgaggtggttttggtcgccaagcttcagcacagaaatttagtgaggctactgggattttgctctgaaggagtagaaaagatacttatctatgaatttgtgcagaacaaaagccttgaccactttttatttggtgggattgctagagggattctctatctccatcaagattctcgggttaaaatcatacatcgcgatctcaaagcaagcaacatattgttagatggagaaatgaacccaaaaatatcagattttggaatggcaagaatatttggagtcgatcaaactcaaggaagcaccagaaggattgtcggaacttag

Protein Analysis

356

Amino Acids

39.11

Weight (kDa)

8.93

Isoelectric Point (pI)

45.52

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000283)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G45860 AT4G05200 AT4G05200 AT4G11521 AT4G11530 AT4G23130 AT4G23130 AT4G23130 AT4G23140 AT4G23140 AT4G23150 AT4G23160 AT4G23170 AT4G23180 AT4G23180 AT4G23180 AT4G23230 AT4G23270 AT4G23270 AT4G23270 AT4G23280 AT4G23280 AT4G23280 AT4G23310 AT4G23310
fragaria_vesca FvH4_3g02772 FvH4_3g02772 FvH4_3g02773 FvH4_3g02773 FvH4_3g02774 FvH4_3g02800 FvH4_3g02820 FvH4_3g02820 FvH4_3g02830
malus_domestica MD00G1101900.v1.1 MD00G1102100.v1.1 MD00G1102200.v1.1 MD01G1098200.v1.1 MD05G1340000.v1.1 MD05G1340300.v1.1 MD07G1014100.v1.1 MD07G1014300.v1.1 MD07G1014400.v1.1 MD07G1014700.v1.1 MD10G1312900.v1.1 MD11G1022600.v1.1 MD11G1291500.v1.1 MD14G1207100.v1.1 MD16G1096600.v1.1
prunus_persica Prupe.4G027300_v2.0.a1 Prupe.4G027400_v2.0.a1 Prupe.4G027700_v2.0.a1 Prupe.4G027800_v2.0.a1
pyrus_communis pycom05g30960 pycom10g00940 pycom10g00950 pycom10g26430 pycom10g26450 pycom10g26460 pycom10g26470 pycom10g26480 pycom10g26490 pycom10g26500 pycom10g26510 pycom10g26570 pycom11g01820 pycom11g04000 pycom14g17130 pycom14g17140 pycom15g28820
rosa_chinensis RchiOBHm_Chr4g0408141 RchiOBHm_Chr5g0004211 RchiOBHm_Chr5g0004231 RchiOBHm_Chr5g0004241 RchiOBHm_Chr5g0004261
rosa_laevigata RLG00000008668 RLG00000008672 RLG00000031212 RLG00000031217
rosa_multiflora Rmu_co8162658.1_g000001 Rmu_co8336297.1_g000001 Rmu_sc0002073.1_g000001 Rmu_sc0004964.1_g000002 Rmu_sc0004964.1_g000003 Rmu_sc0004964.1_g000007 Rmu_sc0006006.1_g000007 Rmu_sc0007868.1_g000015 Rmu_sc0007868.1_g000016 Rmu_sc0007868.1_g000017 Rmu_sc0007868.1_g000021 Rmu_sc0007868.1_g000023 Rmu_sc0019654.1_g000002 Rmu_sc0038540.1_g000001
rosa_roxburghii Rroxscaffold_1G00071450 Rroxscaffold_1G00071460 Rroxscaffold_1G00071470 Rroxscaffold_1G00071560 Rroxscaffold_1G00071720 Rroxscaffold_1G00071770 Rroxscaffold_5G00352640
rosa_rugosa Rorug04G0083700 Rorug04G0410700 Rorug04G0410800 Rorug04G0410900
rosa_samantha Rh4BG145400 Rh4CG154900 Rh4DG141900 Rh5BG037500 Rh5BG037600 Rh5BG037700 Rh5CG041000 Rh5CG041100 Rh5CG041200 Rh5CG041300 Rh5CG041400 Rh5DG037100
rosa_wichuraiana Rw4G012130 Rw5G003450 Rw5G003460 Rw5G003470 Rw5G003480 Rw5G003640 Rw5G003660 Rw5G003670 Rw5G003680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 366
AccII CGCG 1 cut(s) 945
AccIII TCCGGA 1 cut(s) 9
AciI CCGC 3 cut(s) 175, 399, 482
AclWI GGATC 2 cut(s) 14, 20
AcoI YGGCCR 1 cut(s) 549
AcsI RAATTY 2 cut(s) 787, 845
AcuI CTGAAG 2 cut(s) 761, 837
AfaI GTAC 2 cut(s) 296, 385
AfiI CCNNNNNNNGG 1 cut(s) 515
AflIII ACRYGT 1 cut(s) 344
AgsI TTSAA 3 cut(s) 228, 277, 605
AjnI CCWGG 2 cut(s) 373, 514
AjuI GAANNNNNNNTTGG 2 cut(s) 639, 671
AluBI AGCT 8 cut(s) 128, 187, 272, 359, 458, 701, 723, 775
AluI AGCT 8 cut(s) 128, 187, 272, 359, 458, 701, 723, 775
Alw21I GWGCWC 1 cut(s) 314
Alw44I GTGCAC 1 cut(s) 310
AlwI GGATC 2 cut(s) 14, 20
Ama87I CYCGRG 3 cut(s) 90, 132, 924
Aor13HI TCCGGA 1 cut(s) 9
AoxI GGCC 1 cut(s) 549
ApaLI GTGCAC 1 cut(s) 310
ApeKI GCWGC 4 cut(s) 184, 269, 464, 608
ApoI RAATTY 2 cut(s) 787, 845
AspLEI GCGC 1 cut(s) 367
AsuC2I CCSGG 1 cut(s) 727
AsuHPI GGTGA 2 cut(s) 77, 471
AvaI CYCGRG 3 cut(s) 90, 132, 924
BaeGI GKGCMC 1 cut(s) 314
BalI TGGCCA 1 cut(s) 551
BamHI GGATCC 1 cut(s) 6
BbsI GAAGAC 1 cut(s) 341
Bbv12I GWGCWC 1 cut(s) 314
BbvCI CCTCAGC 1 cut(s) 459
BbvI GCAGC 4 cut(s) 196, 281, 476, 620
BccI CCATC 3 cut(s) 39, 921, 968
BceAI ACGGC 1 cut(s) 56
BciT130I CCWGG 2 cut(s) 375, 516
BcnI CCSGG 1 cut(s) 727
BfaI CTAG 3 cut(s) 417, 717, 894
BisI GCNGC 4 cut(s) 185, 270, 465, 609
BlsI GCNGC 4 cut(s) 186, 271, 466, 610
Bme1390I CCNGG 3 cut(s) 375, 516, 727
BmeT110I CYCGRG 3 cut(s) 90, 132, 924
BmiI GGNNCC 2 cut(s) 8, 219
BmrFI CCNGG 3 cut(s) 375, 516, 727
BmrI ACTGGG 1 cut(s) 812
BmuI ACTGGG 1 cut(s) 812
BpiI GAAGAC 1 cut(s) 341
BplI GAGNNNNNCTC 2 cut(s) 888, 920
BpmI CTGGAG 1 cut(s) 498
Bpu10I CCTNAGC 1 cut(s) 459
BpuEI CTTGAG 1 cut(s) 1023
BpuMI CCSGG 1 cut(s) 727
BsaBI GATNNNNATC 2 cut(s) 11, 836
BsaWI WCCGGW 2 cut(s) 9, 239
BsaXI ACNNNNNCTCC 2 cut(s) 487, 517
Bsc4I CCNNNNNNNGG 1 cut(s) 515
Bse1I ACTGG 3 cut(s) 391, 619, 807
Bse8I GATNNNNATC 2 cut(s) 11, 836
BseAI TCCGGA 1 cut(s) 9
BseBI CCWGG 2 cut(s) 375, 516
BseGI GGATG 1 cut(s) 533
BseJI GATNNNNATC 2 cut(s) 11, 836
BseLI CCNNNNNNNGG 1 cut(s) 515
BseMII CTCAG 1 cut(s) 450
BseNI ACTGG 3 cut(s) 391, 619, 807
BseRI GAGGAG 3 cut(s) 120, 369, 755
BseSI GKGCMC 1 cut(s) 314
BseXI GCAGC 4 cut(s) 196, 281, 476, 620
BsgI GTGCAG 2 cut(s) 326, 872
Bsh1236I CGCG 1 cut(s) 945
BshFI GGCC 1 cut(s) 551
BsiHKAI GWGCWC 1 cut(s) 314
BsiHKCI CYCGRG 3 cut(s) 90, 132, 924
BsiSI CCGG 4 cut(s) 10, 221, 240, 726
BslI CCNNNNNNNGG 1 cut(s) 515
BsnI GGCC 1 cut(s) 551
BsoBI CYCGRG 3 cut(s) 90, 132, 924
Bsp1286I GDGCHC 1 cut(s) 314
Bsp13I TCCGGA 1 cut(s) 9
Bsp1407I TGTACA 1 cut(s) 294
Bsp143I GATC 5 cut(s) 6, 12, 77, 946, 1030
Bsp68I TCGCGA 1 cut(s) 945
BspACI CCGC 3 cut(s) 175, 399, 482
BspANI GGCC 1 cut(s) 551
BspCNI CTCAG 1 cut(s) 451
BspEI TCCGGA 1 cut(s) 9
BspFNI CGCG 1 cut(s) 945
BspLI GGNNCC 2 cut(s) 8, 219
BspPI GGATC 2 cut(s) 14, 20
BsrGI TGTACA 1 cut(s) 294
BsrI ACTGG 3 cut(s) 391, 619, 807
BssMI GATC 5 cut(s) 6, 12, 77, 946, 1030
Bst2UI CCWGG 2 cut(s) 375, 516
Bst6I CTCTTC 2 cut(s) 504, 701
BstAUI TGTACA 1 cut(s) 294
BstC8I GCNNGC 1 cut(s) 958
BstDEI CTNAG 2 cut(s) 459, 1068
BstF5I GGATG 1 cut(s) 533
BstFNI CGCG 1 cut(s) 945
BstHHI GCGC 1 cut(s) 367
BstKTI GATC 5 cut(s) 9, 15, 80, 949, 1033
BstMBI GATC 5 cut(s) 6, 12, 77, 946, 1030
BstMWI GCNNNNNNNGC 1 cut(s) 464
BstNI CCWGG 2 cut(s) 375, 516
BstNSI RCATGY 1 cut(s) 348
BstSCI CCNGG 3 cut(s) 373, 514, 725
BstSLI GKGCMC 1 cut(s) 314
BstUI CGCG 1 cut(s) 945
BstV1I GCAGC 4 cut(s) 196, 281, 476, 620
BstV2I GAAGAC 1 cut(s) 341
BstX2I RGATCY 1 cut(s) 6
BstYI RGATCY 1 cut(s) 6
BsuRI GGCC 1 cut(s) 551
BtgZI GCGATG 2 cut(s) 58, 926
BtsCI GGATG 1 cut(s) 533
BtsI GCAGTG 1 cut(s) 314
BtsIMutI CAGTG 2 cut(s) 162, 314
BtuMI TCGCGA 1 cut(s) 945
Cac8I GCNNGC 1 cut(s) 958
CfoI GCGC 1 cut(s) 367
Csp6I GTAC 2 cut(s) 295, 384
CspCI CAANNNNNGTGG 2 cut(s) 474, 509
CviAII CATG 2 cut(s) 142, 345
CviQI GTAC 2 cut(s) 295, 384
DdeI CTNAG 2 cut(s) 459, 1068
DpnI GATC 5 cut(s) 8, 14, 79, 948, 1032
DpnII GATC 5 cut(s) 6, 12, 77, 946, 1030
DraI TTTAAA 1 cut(s) 748
EaeI YGGCCR 1 cut(s) 549
Eam1104I CTCTTC 2 cut(s) 504, 701
EarI CTCTTC 2 cut(s) 504, 701
Eco57I CTGAAG 2 cut(s) 761, 837
Eco88I CYCGRG 3 cut(s) 90, 132, 924
EcoRII CCWGG 2 cut(s) 373, 514
FaeI CATG 2 cut(s) 145, 348
FatI CATG 2 cut(s) 141, 344
FauI CCCGC 1 cut(s) 182
FauNDI CATATG 1 cut(s) 64
Fnu4HI GCNGC 4 cut(s) 185, 270, 465, 609
FokI GGATG 1 cut(s) 520
Fsp4HI GCNGC 4 cut(s) 185, 270, 465, 609
FspBI CTAG 3 cut(s) 417, 717, 894
FspI TGCGCA 1 cut(s) 366
GlaI GCGC 1 cut(s) 366
GluI GCNGC 4 cut(s) 185, 270, 465, 609
GsuI CTGGAG 1 cut(s) 498
HaeIII GGCC 1 cut(s) 551
HapII CCGG 4 cut(s) 10, 221, 240, 726
HhaI GCGC 1 cut(s) 367
Hin1II CATG 2 cut(s) 145, 348
Hin6I GCGC 1 cut(s) 365
HinP1I GCGC 1 cut(s) 365
HindIII AAGCTT 1 cut(s) 773
HinfI GANTC 4 cut(s) 496, 901, 920, 1026
HpaII CCGG 4 cut(s) 10, 221, 240, 726
HphI GGTGA 2 cut(s) 77, 471
Hpy166II GTNNAC 2 cut(s) 312, 667
Hpy188I TCNGA 3 cut(s) 817, 1000, 1064
Hpy188III TCNNGA 4 cut(s) 10, 717, 917, 944
Hpy8I GTNNAC 2 cut(s) 312, 667
Hpy99I CGWCG 1 cut(s) 42
HpyAV CCTTC 4 cut(s) 483, 641, 812, 1047
HpyCH4V TGCA 4 cut(s) 257, 307, 312, 853
HpyF10VI GCNNNNNNNGC 1 cut(s) 464
HpyF3I CTNAG 2 cut(s) 459, 1068
Hsp92II CATG 2 cut(s) 145, 348
HspAI GCGC 1 cut(s) 365
Kpn2I TCCGGA 1 cut(s) 9
Kzo9I GATC 5 cut(s) 6, 12, 77, 946, 1030
LmnI GCTCC 4 cut(s) 133, 223, 356, 728
Lsp1109I GCAGC 4 cut(s) 196, 281, 476, 620
MaeI CTAG 3 cut(s) 417, 717, 894
MaeIII GTNAC 1 cut(s) 340
MalI GATC 5 cut(s) 8, 14, 79, 948, 1032
MboI GATC 5 cut(s) 6, 12, 77, 946, 1030
MboII GAAGA 3 cut(s) 341, 491, 718
MfeI CAATTG 2 cut(s) 564, 600
MflI RGATCY 1 cut(s) 6
MhlI GDGCHC 1 cut(s) 314
MlsI TGGCCA 1 cut(s) 551
MluCI AATT 4 cut(s) 564, 600, 787, 845
MluNI TGGCCA 1 cut(s) 551
MlyI GAGTC 2 cut(s) 490, 1035
MmeI TCCRAC 1 cut(s) 1042
Mox20I TGGCCA 1 cut(s) 551
MroI TCCGGA 1 cut(s) 9
MscI TGGCCA 1 cut(s) 551
MseI TTAA 3 cut(s) 630, 747, 930
Msp20I TGGCCA 1 cut(s) 551
MspA1I CMGCKG 2 cut(s) 187, 458
MspI CCGG 4 cut(s) 10, 221, 240, 726
MspR9I CCNGG 3 cut(s) 375, 516, 727
MunI CAATTG 2 cut(s) 564, 600
MvaI CCWGG 2 cut(s) 375, 516
MvnI CGCG 1 cut(s) 945
MwoI GCNNNNNNNGC 1 cut(s) 464
NciI CCSGG 1 cut(s) 727
NdeI CATATG 1 cut(s) 64
NdeII GATC 5 cut(s) 6, 12, 77, 946, 1030
NlaIII CATG 2 cut(s) 145, 348
NlaIV GGNNCC 2 cut(s) 8, 219
NruI TCGCGA 1 cut(s) 945
NsbI TGCGCA 1 cut(s) 366
NspI RCATGY 1 cut(s) 348
PaeR7I CTCGAG 2 cut(s) 90, 132
PciI ACATGT 1 cut(s) 344
PfeI GAWTC 2 cut(s) 901, 920
PfoI TCCNGGA 1 cut(s) 514
PkrI GCNGC 4 cut(s) 186, 271, 466, 610
PleI GAGTC 2 cut(s) 490, 1034
PpsI GAGTC 2 cut(s) 490, 1034
PscI ACATGT 1 cut(s) 344
Psp6I CCWGG 2 cut(s) 373, 514
PspGI CCWGG 2 cut(s) 373, 514
PspN4I GGNNCC 2 cut(s) 8, 219
PspXI VCTCGAGB 2 cut(s) 90, 132
PsuI RGATCY 1 cut(s) 6
PvuII CAGCTG 2 cut(s) 187, 458
RruI TCGCGA 1 cut(s) 945
RsaI GTAC 2 cut(s) 296, 385
RsaNI GTAC 2 cut(s) 295, 384
SaqAI TTAA 3 cut(s) 630, 747, 930
SatI GCNGC 4 cut(s) 185, 270, 465, 609
Sau3AI GATC 5 cut(s) 6, 12, 77, 946, 1030
SchI GAGTC 2 cut(s) 490, 1035
ScrFI CCNGG 3 cut(s) 375, 516, 727
SduI GDGCHC 1 cut(s) 314
Sfr274I CTCGAG 2 cut(s) 90, 132
SlaI CTCGAG 2 cut(s) 90, 132
SmlI CTYRAG 3 cut(s) 90, 132, 1038
SmoI CTYRAG 3 cut(s) 90, 132, 1038
Sse9I AATT 4 cut(s) 564, 600, 787, 845
SsiI CCGC 3 cut(s) 175, 399, 482
SspI AATATT 1 cut(s) 1020
SspMI CTAG 3 cut(s) 417, 717, 894
StyD4I CCNGG 3 cut(s) 373, 514, 725
TaqI TCGA 5 cut(s) 91, 133, 352, 430, 1029
TasI AATT 4 cut(s) 564, 600, 787, 845
TatI WGTACW 2 cut(s) 294, 383
TfiI GAWTC 2 cut(s) 901, 920
Tru1I TTAA 3 cut(s) 630, 747, 930
Tru9I TTAA 3 cut(s) 630, 747, 930
TscAI CASTG 2 cut(s) 169, 314
TseI GCWGC 4 cut(s) 184, 269, 464, 608
TspDTI ATGAA 5 cut(s) 42, 450, 465, 858, 998
TspRI CASTG 2 cut(s) 169, 314
VneI GTGCAC 1 cut(s) 310
XapI RAATTY 2 cut(s) 787, 845
XbaI TCTAGA 1 cut(s) 716
XceI RCATGY 1 cut(s) 348
XcmI CCANNNNNNNNNTGG 1 cut(s) 878
XhoI CTCGAG 2 cut(s) 90, 132
XspI CTAG 3 cut(s) 417, 717, 894
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.