Rmu_sc0006006.1_g000007

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006006.1
Physical Location & Seq
Reverse (-)
23352 .. 25573
2222 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006006.1_g000007.1.cds

Sequence Viewer

Length: 849 bp
atgggtgatctttgttttctggtgtttagtactagtttgctctttctgttgttcacaggttcatttgctgttgacagcatcagtccctcgcagtctattcatgataacagcagcaccttggtttcaagtgatggaagctttgagctggggttctttagtccaggagttatagttgctgttgtgatagctgcagtgttttcaggaatgctcttagttggctactatgtctaccgaagcaggaccaaattgaaagagacagagaaacgagaagaaagggcacaaaaggaggacctggagctcccgctcttcaacataagcacaatagctagtgcaacagataacttttcagatgatatgaagcttggagaaggtggctttggacctgtttacagggggacactggcagatggacaagaatttgctgtgaagaggctttcaagcagttctggccaaggatttaacgagttcatgaatgaaattataatgatcgccaaacttcagcaccgaaatcttgtaaagattcttggttattgtgtgcaagaagaggagaacatgctgatgtatgaatacatgcccaacagaagcctagacatcttcatttttgatcaaacgagggaagaactactgttagattggcctaaacgtttccacatcatttgtggaattgctcggggtctcctctatctccaccaagattccaggctaaggattatacatagagatctaaaagcaagtaatgttctacttgatgatgaaatgaatcctaaaatttcagactttggcttggctagaatactagctggaggagatcagactggaggaaatactaagagagtggtcgggacatag

Protein Analysis

282

Amino Acids

31.53

Weight (kDa)

5.22

Isoelectric Point (pI)

42.96

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000283)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G45860 AT4G05200 AT4G05200 AT4G11521 AT4G11530 AT4G23130 AT4G23130 AT4G23130 AT4G23140 AT4G23140 AT4G23150 AT4G23160 AT4G23170 AT4G23180 AT4G23180 AT4G23180 AT4G23230 AT4G23270 AT4G23270 AT4G23270 AT4G23280 AT4G23280 AT4G23280 AT4G23310 AT4G23310
fragaria_vesca FvH4_3g02772 FvH4_3g02772 FvH4_3g02773 FvH4_3g02773 FvH4_3g02774 FvH4_3g02800 FvH4_3g02820 FvH4_3g02820 FvH4_3g02830
malus_domestica MD00G1101900.v1.1 MD00G1102100.v1.1 MD00G1102200.v1.1 MD01G1098200.v1.1 MD05G1340000.v1.1 MD05G1340300.v1.1 MD07G1014100.v1.1 MD07G1014300.v1.1 MD07G1014400.v1.1 MD07G1014700.v1.1 MD10G1312900.v1.1 MD11G1022600.v1.1 MD11G1291500.v1.1 MD14G1207100.v1.1 MD16G1096600.v1.1
prunus_persica Prupe.4G027300_v2.0.a1 Prupe.4G027400_v2.0.a1 Prupe.4G027700_v2.0.a1 Prupe.4G027800_v2.0.a1
pyrus_communis pycom05g30960 pycom10g00940 pycom10g00950 pycom10g26430 pycom10g26450 pycom10g26460 pycom10g26470 pycom10g26480 pycom10g26490 pycom10g26500 pycom10g26510 pycom10g26570 pycom11g01820 pycom11g04000 pycom14g17130 pycom14g17140 pycom15g28820
rosa_chinensis RchiOBHm_Chr4g0408141 RchiOBHm_Chr5g0004211 RchiOBHm_Chr5g0004231 RchiOBHm_Chr5g0004241 RchiOBHm_Chr5g0004261
rosa_laevigata RLG00000008668 RLG00000008672 RLG00000031212 RLG00000031217
rosa_multiflora Rmu_co8162658.1_g000001 Rmu_co8336297.1_g000001 Rmu_sc0002073.1_g000001 Rmu_sc0004964.1_g000002 Rmu_sc0004964.1_g000003 Rmu_sc0004964.1_g000007 Rmu_sc0006006.1_g000007 Rmu_sc0007868.1_g000015 Rmu_sc0007868.1_g000016 Rmu_sc0007868.1_g000017 Rmu_sc0007868.1_g000021 Rmu_sc0007868.1_g000023 Rmu_sc0019654.1_g000002 Rmu_sc0038540.1_g000001
rosa_roxburghii Rroxscaffold_1G00071450 Rroxscaffold_1G00071460 Rroxscaffold_1G00071470 Rroxscaffold_1G00071560 Rroxscaffold_1G00071720 Rroxscaffold_1G00071770 Rroxscaffold_5G00352640
rosa_rugosa Rorug04G0083700 Rorug04G0410700 Rorug04G0410800 Rorug04G0410900
rosa_samantha Rh4BG145400 Rh4CG154900 Rh4DG141900 Rh5BG037500 Rh5BG037600 Rh5BG037700 Rh5CG041000 Rh5CG041100 Rh5CG041200 Rh5CG041300 Rh5CG041400 Rh5DG037100
rosa_wichuraiana Rw4G012130 Rw5G003450 Rw5G003460 Rw5G003470 Rw5G003480 Rw5G003640 Rw5G003660 Rw5G003670 Rw5G003680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 482
AccBSI CCGCTC 1 cut(s) 304
AccI GTMKAC 1 cut(s) 228
AciI CCGC 1 cut(s) 302
AclI AACGTT 1 cut(s) 643
AcoI YGGCCR 1 cut(s) 448
AcsI RAATTY 2 cut(s) 416, 768
AcuI CTGAAG 1 cut(s) 482
AfaI GTAC 1 cut(s) 31
AfiI CCNNNNNNNGG 1 cut(s) 705
AgsI TTSAA 4 cut(s) 126, 250, 310, 438
AhlI ACTAGT 1 cut(s) 32
AjnI CCWGG 3 cut(s) 160, 291, 698
AjuI GAANNNNNNNTTGG 2 cut(s) 360, 392
AluBI AGCT 7 cut(s) 138, 145, 188, 298, 326, 361, 800
AluI AGCT 7 cut(s) 138, 145, 188, 298, 326, 361, 800
Alw21I GWGCWC 1 cut(s) 300
Alw26I GTCTC 2 cut(s) 248, 680
Ama87I CYCGRG 1 cut(s) 669
AoxI GGCC 2 cut(s) 448, 635
ApeKI GCWGC 2 cut(s) 111, 188
ApoI RAATTY 2 cut(s) 416, 768
AspS9I GGNCC 3 cut(s) 240, 289, 380
AsuHPI GGTGA 1 cut(s) 17
AvaI CYCGRG 1 cut(s) 669
AvaII GGWCC 3 cut(s) 240, 289, 380
BaeGI GKGCMC 1 cut(s) 280
BalI TGGCCA 1 cut(s) 450
BanII GRGCYC 1 cut(s) 300
Bbv12I GWGCWC 1 cut(s) 300
BbvI GCAGC 2 cut(s) 123, 175
BccI CCATC 2 cut(s) 125, 401
BciT130I CCWGG 3 cut(s) 162, 293, 700
BclI TGATCA 1 cut(s) 604
BcoDI GTCTC 2 cut(s) 248, 680
BcuI ACTAGT 1 cut(s) 32
BfaI CTAG 5 cut(s) 33, 327, 587, 789, 797
BfmI CTRYAG 1 cut(s) 189
BglII AGATCT 1 cut(s) 721
BisI GCNGC 2 cut(s) 112, 189
BlsI GCNGC 2 cut(s) 113, 190
BmcAI AGTACT 1 cut(s) 31
Bme1390I CCNGG 3 cut(s) 162, 293, 700
Bme18I GGWCC 3 cut(s) 240, 289, 380
BmeT110I CYCGRG 1 cut(s) 669
BmgT120I GGNCC 3 cut(s) 240, 289, 380
BmrFI CCNGG 3 cut(s) 162, 293, 700
BmsI GCATC 1 cut(s) 87
BpmI CTGGAG 3 cut(s) 314, 822, 837
Bpu10I CCTNAGC 1 cut(s) 704
BsaI GGTCTC 1 cut(s) 680
BsaJI CCNNGG 2 cut(s) 117, 451
BsaXI ACNNNNNCTCC 2 cut(s) 156, 186
Bsc4I CCNNNNNNNGG 1 cut(s) 705
Bse1I ACTGG 2 cut(s) 405, 820
BseBI CCWGG 3 cut(s) 162, 293, 700
BseDI CCNNGG 2 cut(s) 117, 451
BseLI CCNNNNNNNGG 1 cut(s) 705
BseNI ACTGG 2 cut(s) 405, 820
BseRI GAGGAG 3 cut(s) 560, 668, 819
BseSI GKGCMC 1 cut(s) 280
BseXI GCAGC 2 cut(s) 123, 175
BseYI CCCAGC 1 cut(s) 145
BshFI GGCC 2 cut(s) 450, 637
BsiHKAI GWGCWC 1 cut(s) 300
BsiHKCI CYCGRG 1 cut(s) 669
BslFI GGGAC 2 cut(s) 69, 409
BslI CCNNNNNNNGG 1 cut(s) 705
BsmAI GTCTC 2 cut(s) 248, 680
BsmFI GGGAC 2 cut(s) 69, 409
BsmI GAATGC 1 cut(s) 210
BsnI GGCC 2 cut(s) 450, 637
Bso31I GGTCTC 1 cut(s) 680
BsoBI CYCGRG 1 cut(s) 669
Bsp1286I GDGCHC 2 cut(s) 280, 300
Bsp143I GATC 5 cut(s) 7, 486, 604, 721, 808
BspACI CCGC 1 cut(s) 302
BspANI GGCC 2 cut(s) 450, 637
BspHI TCATGA 2 cut(s) 100, 468
BspMAI CTGCAG 1 cut(s) 193
BspQI GCTCTTC 1 cut(s) 311
BspTNI GGTCTC 1 cut(s) 680
BsrBI CCGCTC 1 cut(s) 304
BsrI ACTGG 2 cut(s) 405, 820
BssECI CCNNGG 2 cut(s) 117, 451
BssMI GATC 5 cut(s) 7, 486, 604, 721, 808
BssT1I CCWWGG 2 cut(s) 117, 451
Bst2UI CCWGG 3 cut(s) 162, 293, 700
Bst4CI ACNGT 1 cut(s) 627
Bst6I CTCTTC 3 cut(s) 311, 422, 537
BstDEI CTNAG 3 cut(s) 211, 704, 828
BstKTI GATC 5 cut(s) 10, 489, 607, 724, 811
BstMAI GTCTC 2 cut(s) 248, 680
BstMBI GATC 5 cut(s) 7, 486, 604, 721, 808
BstMWI GCNNNNNNNGC 1 cut(s) 447
BstNI CCWGG 3 cut(s) 162, 293, 700
BstNSI RCATGY 2 cut(s) 556, 574
BstSCI CCNGG 3 cut(s) 160, 291, 698
BstSFI CTRYAG 1 cut(s) 189
BstSLI GKGCMC 1 cut(s) 280
BstV1I GCAGC 2 cut(s) 123, 175
BstX2I RGATCY 1 cut(s) 721
BstYI RGATCY 1 cut(s) 721
BsuRI GGCC 2 cut(s) 450, 637
BtsI GCAGTG 1 cut(s) 198
BtsIMutI CAGTG 2 cut(s) 198, 398
CciI TCATGA 2 cut(s) 100, 468
Cfr13I GGNCC 3 cut(s) 240, 289, 380
Csp6I GTAC 1 cut(s) 30
CspCI CAANNNNNGTGG 2 cut(s) 638, 673
CviAII CATG 4 cut(s) 101, 469, 553, 571
CviQI GTAC 1 cut(s) 30
DdeI CTNAG 3 cut(s) 211, 704, 828
DpnI GATC 5 cut(s) 9, 488, 606, 723, 810
DpnII GATC 5 cut(s) 7, 486, 604, 721, 808
EaeI YGGCCR 1 cut(s) 448
Eam1104I CTCTTC 3 cut(s) 311, 422, 537
EarI CTCTTC 3 cut(s) 311, 422, 537
Ecl136II GAGCTC 1 cut(s) 298
Eco130I CCWWGG 2 cut(s) 117, 451
Eco24I GRGCYC 1 cut(s) 300
Eco31I GGTCTC 1 cut(s) 680
Eco47I GGWCC 3 cut(s) 240, 289, 380
Eco53kI GAGCTC 1 cut(s) 298
Eco57I CTGAAG 1 cut(s) 482
Eco88I CYCGRG 1 cut(s) 669
EcoICRI GAGCTC 1 cut(s) 298
EcoO109I RGGNCCY 1 cut(s) 289
EcoRII CCWGG 3 cut(s) 160, 291, 698
EcoT14I CCWWGG 2 cut(s) 117, 451
EcoT38I GRGCYC 1 cut(s) 300
ErhI CCWWGG 2 cut(s) 117, 451
FaeI CATG 4 cut(s) 104, 472, 556, 574
FaqI GGGAC 2 cut(s) 69, 409
FatI CATG 4 cut(s) 100, 468, 552, 570
FauI CCCGC 1 cut(s) 309
FbaI TGATCA 1 cut(s) 604
FblI GTMKAC 1 cut(s) 228
Fnu4HI GCNGC 2 cut(s) 112, 189
FriOI GRGCYC 1 cut(s) 300
Fsp4HI GCNGC 2 cut(s) 112, 189
FspBI CTAG 5 cut(s) 33, 327, 587, 789, 797
GluI GCNGC 2 cut(s) 112, 189
GsaI CCCAGC 1 cut(s) 149
GsuI CTGGAG 3 cut(s) 314, 822, 837
HaeIII GGCC 2 cut(s) 450, 637
Hin1II CATG 4 cut(s) 104, 472, 556, 574
HincII GTYRAC 1 cut(s) 73
HindII GTYRAC 1 cut(s) 73
HindIII AAGCTT 2 cut(s) 136, 359
HinfI GANTC 3 cut(s) 520, 695, 760
HphI GGTGA 1 cut(s) 17
Hpy166II GTNNAC 4 cut(s) 54, 73, 229, 388
Hpy188I TCNGA 3 cut(s) 349, 775, 813
Hpy188III TCNNGA 4 cut(s) 101, 201, 469, 841
Hpy8I GTNNAC 4 cut(s) 54, 73, 229, 388
HpyAV CCTTC 1 cut(s) 362
HpyCH4III ACNGT 1 cut(s) 627
HpyCH4IV ACGT 1 cut(s) 643
HpyCH4V TGCA 3 cut(s) 191, 332, 538
HpyF10VI GCNNNNNNNGC 1 cut(s) 447
HpyF3I CTNAG 3 cut(s) 211, 704, 828
HpySE526I ACGT 1 cut(s) 643
Hsp92II CATG 4 cut(s) 104, 472, 556, 574
Ksp22I TGATCA 1 cut(s) 604
Kzo9I GATC 5 cut(s) 7, 486, 604, 721, 808
LguI GCTCTTC 1 cut(s) 311
LmnI GCTCC 2 cut(s) 295, 303
Lsp1109I GCAGC 2 cut(s) 123, 175
LweI GCATC 1 cut(s) 87
MaeI CTAG 5 cut(s) 33, 327, 587, 789, 797
MaeII ACGT 1 cut(s) 643
MalI GATC 5 cut(s) 9, 488, 606, 723, 810
MbiI CCGCTC 1 cut(s) 304
MboI GATC 5 cut(s) 7, 486, 604, 721, 808
MboII GAAGA 6 cut(s) 281, 298, 439, 554, 586, 629
MflI RGATCY 1 cut(s) 721
MhlI GDGCHC 2 cut(s) 280, 300
MlsI TGGCCA 1 cut(s) 450
MluCI AATT 5 cut(s) 245, 416, 477, 663, 768
MluNI TGGCCA 1 cut(s) 450
MnlI CCTC 8 cut(s) 97, 280, 423, 538, 606, 689, 797, 812
Mox20I TGGCCA 1 cut(s) 450
MscI TGGCCA 1 cut(s) 450
MseI TTAA 1 cut(s) 459
MslI CAYNNNNRTG 1 cut(s) 557
Msp20I TGGCCA 1 cut(s) 450
MspR9I CCNGG 3 cut(s) 162, 293, 700
Mva1269I GAATGC 1 cut(s) 210
MvaI CCWGG 3 cut(s) 162, 293, 700
MwoI GCNNNNNNNGC 1 cut(s) 447
NdeII GATC 5 cut(s) 7, 486, 604, 721, 808
NlaIII CATG 4 cut(s) 104, 472, 556, 574
NspI RCATGY 2 cut(s) 556, 574
PagI TCATGA 2 cut(s) 100, 468
PciSI GCTCTTC 1 cut(s) 311
PctI GAATGC 1 cut(s) 210
PfeI GAWTC 3 cut(s) 520, 695, 760
PfoI TCCNGGA 1 cut(s) 160
PkrI GCNGC 2 cut(s) 113, 190
PpuMI RGGWCCY 1 cut(s) 289
PsiI TTATAA 1 cut(s) 482
Psp124BI GAGCTC 1 cut(s) 300
Psp1406I AACGTT 1 cut(s) 643
Psp5II RGGWCCY 1 cut(s) 289
Psp6I CCWGG 3 cut(s) 160, 291, 698
PspFI CCCAGC 1 cut(s) 145
PspGI CCWGG 3 cut(s) 160, 291, 698
PspPI GGNCC 3 cut(s) 240, 289, 380
PspPPI RGGWCCY 1 cut(s) 289
PstI CTGCAG 1 cut(s) 193
PsuI RGATCY 1 cut(s) 721
RsaI GTAC 1 cut(s) 31
RsaNI GTAC 1 cut(s) 30
RseI CAYNNNNRTG 1 cut(s) 557
SacI GAGCTC 1 cut(s) 300
SapI GCTCTTC 1 cut(s) 311
SaqAI TTAA 1 cut(s) 459
SatI GCNGC 2 cut(s) 112, 189
Sau3AI GATC 5 cut(s) 7, 486, 604, 721, 808
Sau96I GGNCC 3 cut(s) 240, 289, 380
ScaI AGTACT 1 cut(s) 31
ScrFI CCNGG 3 cut(s) 162, 293, 700
SduI GDGCHC 2 cut(s) 280, 300
SfaNI GCATC 1 cut(s) 87
SfcI CTRYAG 1 cut(s) 189
SinI GGWCC 3 cut(s) 240, 289, 380
SmiMI CAYNNNNRTG 1 cut(s) 557
SpeI ACTAGT 1 cut(s) 32
Sse9I AATT 5 cut(s) 245, 416, 477, 663, 768
SsiI CCGC 1 cut(s) 302
SspMI CTAG 5 cut(s) 33, 327, 587, 789, 797
SstI GAGCTC 1 cut(s) 300
StyD4I CCNGG 3 cut(s) 160, 291, 698
StyI CCWWGG 2 cut(s) 117, 451
TaaI ACNGT 1 cut(s) 627
TaiI ACGT 1 cut(s) 646
TasI AATT 5 cut(s) 245, 416, 477, 663, 768
TatI WGTACW 1 cut(s) 29
TfiI GAWTC 3 cut(s) 520, 695, 760
Tru1I TTAA 1 cut(s) 459
Tru9I TTAA 1 cut(s) 459
TscAI CASTG 2 cut(s) 198, 405
TseI GCWGC 2 cut(s) 111, 188
TspRI CASTG 2 cut(s) 198, 405
VpaK11BI GGWCC 3 cut(s) 240, 289, 380
XapI RAATTY 2 cut(s) 416, 768
XceI RCATGY 2 cut(s) 556, 574
XcmI CCANNNNNNNNNTGG 1 cut(s) 656
XmiI GTMKAC 1 cut(s) 228
XspI CTAG 5 cut(s) 33, 327, 587, 789, 797
ZrmI AGTACT 1 cut(s) 31
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.