MD07G1014400.v1.1

protein serine/threonine kinase activity

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
Physical Location & Seq
Reverse (-)
1306641 .. 1307751
1111 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1014400.v1.1.491

Sequence Viewer

Length: 567 bp
ATGAGTGTGCATGGTTATCATTTGCTCACTATGTTTTTCTGGTCCATTACATGTAATATTTTGAAACTGACCGTCTTAGCTAAGGATGATACAAAGACTGTTGAGTCCTTGCAATTCGACTTGGGAGCTATTGAAACCGCCACAAACAAGTTTTCCGATAATAACAAGCTAGGTGAAGGCGGATTTGGTGTAGTTTTCAAGGGAACACTTGCTAATGAACAAGAAATTGTAGTGAAGAGGTTGTCAAAAAGCTCTAGACATGGCGTCCAAGAATTTAAGAACGAGATTGCATTGGTAGCCAAACTTCAACATAGAAATCTTGTTAGGCTTCTGGGATTTTGTTTGGAAGGAGAGGAAACCCTACTTGTTTATGAATATGTGCCAAACAAAAGTCTTGATTATTTTCTTTTTGATTCAAGGCATAGAGTTATACATCGTGATCTAAAAGCGAGTAACATCATGTTAGATGACAATATGAATAAAAAAATATCAGACTTTGGTATGTCAAGAATGTTTGGAGTCGATGATCAAACTCAAGGAAACACCAAAAGAATTGTCAACACCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

189

Amino Acids

21.41

Weight (kDa)

7.8

Isoelectric Point (pI)

40.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 52 - 136 1e-14 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 54 - 140 1.2e-17 Protein tyrosine and serine/threonine kinase
PK_Tyr_Ser-Thr PF07714 140 - 183 4.9e-09 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 140 - 176 4e-09 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000283)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G45860 AT4G05200 AT4G05200 AT4G11521 AT4G11530 AT4G23130 AT4G23130 AT4G23130 AT4G23140 AT4G23140 AT4G23150 AT4G23160 AT4G23170 AT4G23180 AT4G23180 AT4G23180 AT4G23230 AT4G23270 AT4G23270 AT4G23270 AT4G23280 AT4G23280 AT4G23280 AT4G23310 AT4G23310
fragaria_vesca FvH4_3g02772 FvH4_3g02772 FvH4_3g02773 FvH4_3g02773 FvH4_3g02774 FvH4_3g02800 FvH4_3g02820 FvH4_3g02820 FvH4_3g02830
malus_domestica MD00G1101900.v1.1 MD00G1102100.v1.1 MD00G1102200.v1.1 MD01G1098200.v1.1 MD05G1340000.v1.1 MD05G1340300.v1.1 MD07G1014100.v1.1 MD07G1014300.v1.1 MD07G1014400.v1.1 MD07G1014700.v1.1 MD10G1312900.v1.1 MD11G1022600.v1.1 MD11G1291500.v1.1 MD14G1207100.v1.1 MD16G1096600.v1.1
prunus_persica Prupe.4G027300_v2.0.a1 Prupe.4G027400_v2.0.a1 Prupe.4G027700_v2.0.a1 Prupe.4G027800_v2.0.a1
pyrus_communis pycom05g30960 pycom10g00940 pycom10g00950 pycom10g26430 pycom10g26450 pycom10g26460 pycom10g26470 pycom10g26480 pycom10g26490 pycom10g26500 pycom10g26510 pycom10g26570 pycom11g01820 pycom11g04000 pycom14g17130 pycom14g17140 pycom15g28820
rosa_chinensis RchiOBHm_Chr4g0408141 RchiOBHm_Chr5g0004211 RchiOBHm_Chr5g0004231 RchiOBHm_Chr5g0004241 RchiOBHm_Chr5g0004261
rosa_laevigata RLG00000008668 RLG00000008672 RLG00000031212 RLG00000031217
rosa_multiflora Rmu_co8162658.1_g000001 Rmu_co8336297.1_g000001 Rmu_sc0002073.1_g000001 Rmu_sc0004964.1_g000002 Rmu_sc0004964.1_g000003 Rmu_sc0004964.1_g000007 Rmu_sc0006006.1_g000007 Rmu_sc0007868.1_g000015 Rmu_sc0007868.1_g000016 Rmu_sc0007868.1_g000017 Rmu_sc0007868.1_g000021 Rmu_sc0007868.1_g000023 Rmu_sc0019654.1_g000002 Rmu_sc0038540.1_g000001
rosa_roxburghii Rroxscaffold_1G00071450 Rroxscaffold_1G00071460 Rroxscaffold_1G00071470 Rroxscaffold_1G00071560 Rroxscaffold_1G00071720 Rroxscaffold_1G00071770 Rroxscaffold_5G00352640
rosa_rugosa Rorug04G0083700 Rorug04G0410700 Rorug04G0410800 Rorug04G0410900
rosa_samantha Rh4BG145400 Rh4CG154900 Rh4DG141900 Rh5BG037500 Rh5BG037600 Rh5BG037700 Rh5CG041000 Rh5CG041100 Rh5CG041200 Rh5CG041300 Rh5CG041400 Rh5DG037100
rosa_wichuraiana Rw4G012130 Rw5G003450 Rw5G003460 Rw5G003470 Rw5G003480 Rw5G003640 Rw5G003660 Rw5G003670 Rw5G003680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 103
AciI CCGC 2 cut(s) 138, 180
AcsI RAATTY 1 cut(s) 272
AcyI GRCGYC 1 cut(s) 264
AflIII ACRYGT 1 cut(s) 50
AgsI TTSAA 5 cut(s) 64, 134, 199, 308, 417
AhdI GACNNNNNGTC 1 cut(s) 263
AjuI GAANNNNNNNTTGG 2 cut(s) 168, 200
AluBI AGCT 4 cut(s) 80, 128, 169, 252
AluI AGCT 4 cut(s) 80, 128, 169, 252
ApoI RAATTY 1 cut(s) 272
ArsI GACNNNNNNTTYG 1 cut(s) 540
AspS9I GGNCC 1 cut(s) 42
AsuHPI GGTGA 1 cut(s) 185
AvaII GGWCC 1 cut(s) 42
BarI GAAGNNNNNNTAC 2 cut(s) 288, 320
BclI TGATCA 1 cut(s) 526
BfaI CTAG 3 cut(s) 170, 255, 565
Bme18I GGWCC 1 cut(s) 42
BmeRI GACNNNNNGTC 1 cut(s) 263
BmgT120I GGNCC 1 cut(s) 42
Bpu10I CCTNAGC 1 cut(s) 81
BpuEI CTTGAG 1 cut(s) 519
BsaHI GRCGYC 1 cut(s) 264
BseGI GGATG 1 cut(s) 91
Bsp143I GATC 2 cut(s) 439, 526
BspACI CCGC 2 cut(s) 138, 180
BssMI GATC 2 cut(s) 439, 526
BssNI GRCGYC 1 cut(s) 264
Bst4CI ACNGT 2 cut(s) 73, 100
Bst6I CTCTTC 1 cut(s) 230
BstACI GRCGYC 1 cut(s) 264
BstDEI CTNAG 2 cut(s) 76, 81
BstF5I GGATG 1 cut(s) 91
BstKTI GATC 2 cut(s) 442, 529
BstMBI GATC 2 cut(s) 439, 526
BstMWI GCNNNNNNNGC 1 cut(s) 296
BstNSI RCATGY 1 cut(s) 54
BtsCI GGATG 1 cut(s) 91
Cfr13I GGNCC 1 cut(s) 42
CseI GACGC 1 cut(s) 253
CviAII CATG 4 cut(s) 11, 51, 260, 460
CviJI RGCY 6 cut(s) 80, 128, 169, 252, 299, 328
CviKI_1 RGCY 6 cut(s) 80, 128, 169, 252, 299, 328
DdeI CTNAG 2 cut(s) 76, 81
DpnI GATC 2 cut(s) 441, 528
DpnII GATC 2 cut(s) 439, 526
DrdI GACNNNNNNGTC 1 cut(s) 103
DriI GACNNNNNGTC 1 cut(s) 263
DseDI GACNNNNNNGTC 1 cut(s) 103
Eam1104I CTCTTC 1 cut(s) 230
Eam1105I GACNNNNNGTC 1 cut(s) 263
EarI CTCTTC 1 cut(s) 230
EciI GGCGGA 1 cut(s) 195
Eco47I GGWCC 1 cut(s) 42
FaeI CATG 4 cut(s) 14, 54, 263, 463
FatI CATG 4 cut(s) 10, 50, 259, 459
FbaI TGATCA 1 cut(s) 526
FokI GGATG 1 cut(s) 98
FspBI CTAG 3 cut(s) 170, 255, 565
HgaI GACGC 1 cut(s) 253
Hin1I GRCGYC 1 cut(s) 264
Hin1II CATG 4 cut(s) 14, 54, 263, 463
HincII GTYRAC 1 cut(s) 559
HindII GTYRAC 1 cut(s) 559
HinfI GANTC 3 cut(s) 104, 413, 519
HphI GGTGA 1 cut(s) 185
Hpy166II GTNNAC 1 cut(s) 559
Hpy188I TCNGA 2 cut(s) 157, 493
Hpy188III TCNNGA 4 cut(s) 255, 395, 437, 507
Hpy8I GTNNAC 1 cut(s) 559
HpyAV CCTTC 2 cut(s) 170, 341
HpyCH4III ACNGT 2 cut(s) 73, 100
HpyCH4V TGCA 3 cut(s) 10, 112, 290
HpyF10VI GCNNNNNNNGC 1 cut(s) 296
HpyF3I CTNAG 2 cut(s) 76, 81
Hsp92I GRCGYC 1 cut(s) 264
Hsp92II CATG 4 cut(s) 14, 54, 263, 463
Ksp22I TGATCA 1 cut(s) 526
Kzo9I GATC 2 cut(s) 439, 526
LmnI GCTCC 1 cut(s) 125
LpnPI CCDG 2 cut(s) 25, 317
MaeI CTAG 3 cut(s) 170, 255, 565
MaeIII GTNAC 1 cut(s) 452
MalI GATC 2 cut(s) 441, 528
MboI GATC 2 cut(s) 439, 526
MboII GAAGA 1 cut(s) 247
MluCI AATT 4 cut(s) 113, 225, 272, 552
MlyI GAGTC 2 cut(s) 113, 528
MnlI CCTC 2 cut(s) 231, 346
MseI TTAA 1 cut(s) 276
MwoI GCNNNNNNNGC 1 cut(s) 296
NdeII GATC 2 cut(s) 439, 526
NlaIII CATG 4 cut(s) 14, 54, 263, 463
NspI RCATGY 1 cut(s) 54
PciI ACATGT 1 cut(s) 50
PfeI GAWTC 1 cut(s) 413
PleI GAGTC 2 cut(s) 112, 527
PpsI GAGTC 2 cut(s) 112, 527
PscI ACATGT 1 cut(s) 50
PspPI GGNCC 1 cut(s) 42
SaqAI TTAA 1 cut(s) 276
Sau3AI GATC 2 cut(s) 439, 526
Sau96I GGNCC 1 cut(s) 42
SchI GAGTC 2 cut(s) 113, 528
SetI ASST 7 cut(s) 82, 130, 171, 175, 242, 254, 566
SinI GGWCC 1 cut(s) 42
SmlI CTYRAG 1 cut(s) 534
SmoI CTYRAG 1 cut(s) 534
Sse9I AATT 4 cut(s) 113, 225, 272, 552
SsiI CCGC 2 cut(s) 138, 180
SspI AATATT 1 cut(s) 58
SspMI CTAG 3 cut(s) 170, 255, 565
TaaI ACNGT 2 cut(s) 73, 100
TaqI TCGA 2 cut(s) 117, 522
TasI AATT 4 cut(s) 113, 225, 272, 552
TfiI GAWTC 1 cut(s) 413
Tru1I TTAA 1 cut(s) 276
Tru9I TTAA 1 cut(s) 276
TspDTI ATGAA 3 cut(s) 231, 387, 491
VpaK11BI GGWCC 1 cut(s) 42
XapI RAATTY 1 cut(s) 272
XbaI TCTAGA 1 cut(s) 254
XceI RCATGY 1 cut(s) 54
XspI CTAG 3 cut(s) 170, 255, 565
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.