Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0000061

Physical Location & Seq

Genomic Coordinates Forward (+)

3867648 .. 3870201

Gene Structure 2554 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g06572.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1707 bp

ATGCCGGAGCTGAGTGAAACCTTGTCACTAGCACCGCTTCTAGCCATTACTCTCCTCTTCCTATACAAATGGGCCTCCACCAGTATAGAAAACTCGCCACCTTCTCCACCAAAACTCCCGATTCGCGGAAACCTTCACCAACTAGGGTTACACCCTCATCGCGCACTCCGAGACTTGGCTCAGATCCATGGCCCCCTCATGCTCCTTCACTTTGGAAGCAACCCTGTCCTCGTTGTTTCCTCGGCTGAGGAAGCCCGTGAGATCATGAAAACCCATGACCTCTCTTTCTCCAACAGACCCAAGACGTTCGTCTTTGAGAAGCTGCTCTACAATTTCAGAGACGTAGCGTCGGCGCCTTATGGAGAGTACTGGAGGCAGATGAAGAGTTTATGTGTTTTGAATCTCCTGAGCCACAAAAGGGTTCGCTCTTTTCGCGCTGTTAGGGAGGAGGAAGTTAATTCGATGATCGAAAAGATAAAGGAATCTTCATCAACATCATCGGTTGTGAACATGAGCGAAACGTTTGCTACGCTGACTAATGATGTCACCAGTAGAGTTGCTCTGGGTAGGAAGTACAATACTGATCACCGCAGGAAGAAAACGAAGAGGTTTCAGGGAGTTCAGGCTTGCAGCAAGTCAGCAACGTACGCTGCTGCGCCGCCTGCGTGGGGAAGAGCCTTTTCAGCTATGAAGATCATCAAAAGTCCACTTCGTAATCGAATGAGAGATCAGTGGTTGAACGATAGTTTGATTGTTTACATTGAGAAAGATGTTTTTGCTTGTTTGAATGATCTGTTGGAGGAGTTTGTAAAGCTAATAGGACACATCAATATTGGGGATTTTATCCCATGGCTTGCTTGGTTGAACCGTATGAATGGTTTGGATGCTAGATTGGACAGGGTGGCCAGACAGTTTGATGAGTTCTTGGAGAGAGTGATTCAAGAGCATGTAAGTAGTTCCGAAAGTAGAACTAACGGCCATGCTCGTACTGAGAATGACAAAAAGGATTTTGTGGACGTTTTACTTGAAATTCAGAAAGAGAACTCACTTGGCCTTCCCCTCGAAAGAGTTAGCATAAAGGCACTTATCTTGGATATGTTTGCTGCTGGAACTGAAACTACGTATACATTCCTGGAATGGGCACTAAGTAAGCTTTTAAGGAATCCAATGGTCATGAGCAAACTGCAGAAAGAGATTCGGGGAATAGTCGGAGACAAGAAAGACATAACGGAGGATGATTTGACCGGAATGCACTACTTGAAGGCAGTGATCAAAGAGACTTTTCGCTTGCACCCTCCGGCTCCGTTACTAGTGCCCAGGTTATCAACCCGCGAAGTGAAAATAAATGGTTACAACATTAAAGCCAACACACAAGTCACAGTGAACGCATGGCACATTGGAAGAGATCCCAACACATACAAGAATCCAGAAGAGTTTGAGCCGGAAAGGTTCCTGATTCAGAACGATATAGATTACAGGGGAAATGACTTCCAACTTATTCCATTTGGAGCTGGTAGAAGGATATGTCCAGGTATTCAGTTTTCCACGGCTCTTAATGAGATTGCTTTGGCAAACATACTGCACCAATTCAATTGGGAATTGCCTGATGGAGCAAAAGGCCAGGATTTGGATATGACGGAATCTACTGGAATAACCATACATAGAAAAAATCCTCTTAAAGTCGTGGCTGTTCCATATTTTCATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005794 GO:0005911 GO:0006629 GO:0006720 GO:0006721 GO:0006722 GO:0008150 GO:0008152 GO:0009058 GO:0009506 GO:0009507 GO:0009536 GO:0009987 GO:0012505 GO:0016020 GO:0016491 GO:0016705 GO:0016709 GO:0019748 GO:0030054 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044255 GO:0044424 GO:0044444 GO:0044464 GO:0044550 GO:0055044 GO:0055114 GO:0071704

KEGG Pathways

Metabolic & Signaling

ko00140 ko00380 ko00590 ko00591 ko00830 ko00980 ko01100 ko04212 ko04726 ko04750 ko04913 ko04917 ko04927 ko04934 ko05204 map00140 map00380 map00590 map00591 map00830 map00980 map01100 map04212 map04726 map04750 map04913 map04917 map04927 map04934 map05204

Pfam Domains

Protein Families

p450

Protein Analysis

569

Amino Acids

64.81

Weight (kDa)

9.05

Isoelectric Point (pI)

41.8

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
p450	PF00067	33 - 212	8.8e-26	Cytochrome P450
p450	PF00067	268 - 556	2.4e-74	Cytochrome P450

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0000061)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G48270 AT3G48280 AT3G48290 AT3G48290 AT3G48300 AT3G48300 AT3G48310 AT3G48320 AT4G20235 AT4G20235
fragaria_vesca	FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g36190 FvH4_3g14160 FvH4_3g14210 FvH4_3g14260 FvH4_3g14260 FvH4_3g21100 FvH4_3g21380 FvH4_4g24460 FvH4_4g24500 FvH4_5g06571 FvH4_5g06571 FvH4_5g06571 FvH4_5g06571 FvH4_5g06572 FvH4_5g06573 FvH4_5g06574 FvH4_5g06575 FvH4_5g06576 FvH4_5g06577 FvH4_5g06577 FvH4_5g07540 FvH4_5g07550 FvH4_5g07560 FvH4_5g07570 FvH4_5g29491 FvH4_5g29492 FvH4_6g23870 FvH4_6g23880 FvH4_6g26870 FvH4_7g11861 FvH4_7g11862 FvH4_7g13050 FvH4_7g13060 FvH4_7g13080 FvH4_7g13080 FvH4_7g22630 FvH4_7g22650 FvH4_7g22651 FvH4_7g23020
malus_domestica	MD03G1207400.v1.1 MD03G1214800.v1.1 MD03G1218500.v1.1 MD06G1163100.v1.1 MD06G1163300.v1.1 MD06G1163400.v1.1 MD06G1163500.v1.1 MD06G1163600.v1.1 MD06G1163800.v1.1 MD06G1164000.v1.1 MD06G1164100.v1.1 MD06G1224400.v1.1 MD08G1222800.v1.1 MD08G1222900.v1.1 MD08G1223100.v1.1 MD11G1091500.v1.1 MD11G1091800.v1.1 MD14G1163200.v1.1 MD14G1169000.v1.1 MD15G1207200.v1.1 MD15G1207300.v1.1 MD17G1259400.v1.1
prunus_persica	Prupe.4G198100_v2.0.a1 Prupe.4G199100_v2.0.a1 Prupe.4G199400_v2.0.a1 Prupe.4G199800_v2.0.a1 Prupe.4G225200_v2.0.a1 Prupe.4G239100_v2.0.a1 Prupe.5G156600_v2.0.a1 Prupe.5G163500_v2.0.a1 Prupe.7G209500_v2.0.a1 Prupe.I003400_v2.0.a1
pyrus_communis	pycom03g16340 pycom06g14600 pycom06g14610 pycom06g14620 pycom06g14630 pycom06g14640 pycom06g14670 pycom06g14690 pycom08g19390 pycom08g19400 pycom08g19410 pycom11g07600 pycom11g07610 pycom11g07620 pycom11g07660 pycom14g13580 pycom14g14080 pycom14g14100 pycom14g14110 pycom15g18380 pycom17g26080
rosa_chinensis	RchiOBHm_Chr1g0339441 RchiOBHm_Chr1g0339451 RchiOBHm_Chr1g0352191 RchiOBHm_Chr1g0368221 RchiOBHm_Chr2g0129531 RchiOBHm_Chr2g0129541 RchiOBHm_Chr3g0477631 RchiOBHm_Chr3g0482551 RchiOBHm_Chr3g0482561 RchiOBHm_Chr3g0482571 RchiOBHm_Chr4g0411601 RchiOBHm_Chr4g0422181 RchiOBHm_Chr5g0036661 RchiOBHm_Chr5g0036731 RchiOBHm_Chr6g0274021 RchiOBHm_Chr7g0190921 RchiOBHm_Chr7g0190931 RchiOBHm_Chr7g0190941 RchiOBHm_Chr7g0190951 RchiOBHm_Chr7g0190961 RchiOBHm_Chr7g0190971 RchiOBHm_Chr7g0191001 RchiOBHm_Chr7g0191011 RchiOBHm_Chr7g0191021 RchiOBHm_Chr7g0192181 RchiOBHm_Chr7g0192191 RchiOBHm_Chr7g0192201 RchiOBHm_Chr7g0192221 RchiOBHm_Chr7g0192231 RchiOBHm_Chr7g0192281 RchiOBHm_Chr7g0197311
rosa_laevigata	RLG00000003942 RLG00000004345 RLG00000004379 RLG00000004383 RLG00000004384 RLG00000004385 RLG00000004387 RLG00000004388 RLG00000004389 RLG00000004480 RLG00000004481 RLG00000004482 RLG00000004483 RLG00000004485 RLG00000008342 RLG00000008401 RLG00000013583 RLG00000017044 RLG00000027229 RLG00000028349 RLG00000028350 RLG00000028353 RLG00000028820 RLG00000033707 RLG00000033710
rosa_multiflora	Rmu_co8020340.1_g000001 Rmu_co8096640.1_g000001 Rmu_co8214930.1_g000001 Rmu_co8223272.1_g000001 Rmu_co8282535.1_g000001 Rmu_co8343567.1_g000001 Rmu_co8404191.1_g000001 Rmu_co8455157.1_g000001 Rmu_sc0000062.1_g000028 Rmu_sc0000082.1_g000091 Rmu_sc0000509.1_g000017 Rmu_sc0000775.1_g000001 Rmu_sc0000999.1_g000034 Rmu_sc0001559.1_g000004 Rmu_sc0001559.1_g000009 Rmu_sc0002164.1_g000001 Rmu_sc0002164.1_g000005 Rmu_sc0002164.1_g000007 Rmu_sc0002164.1_g000008 Rmu_sc0002164.1_g000009 Rmu_sc0002164.1_g000019 Rmu_sc0002247.1_g000009 Rmu_sc0002373.1_g000002 Rmu_sc0002373.1_g000003 Rmu_sc0002944.1_g000059 Rmu_sc0003930.1_g000004 Rmu_sc0004958.1_g000001 Rmu_sc0005197.1_g000014 Rmu_sc0005898.1_g000008 Rmu_sc0005898.1_g000009 Rmu_sc0005898.1_g000015 Rmu_sc0006059.1_g000004 Rmu_sc0006059.1_g000010 Rmu_sc0006903.1_g000007 Rmu_sc0006903.1_g000008 Rmu_sc0006968.1_g000001 Rmu_sc0011009.1_g000009 Rmu_sc0022852.1_g000002 Rmu_sc0033854.1_g000001 Rmu_ssc0000421.1_g000057 Rmu_ssc0000421.1_g000067 Rmu_ssc0000421.1_g000069 Rmu_ssc0000421.1_g000072 Rmu_ssc0000421.1_g000081 Rmu_ssc0000421.1_g000086
rosa_roxburghii	Rroxscaffold_158G00443680 Rroxscaffold_158G00443710 Rroxscaffold_158G00443720 Rroxscaffold_158G00443740 Rroxscaffold_1G00034950 Rroxscaffold_1G00044240 Rroxscaffold_1G00044270 Rroxscaffold_3G00241380 Rroxscaffold_3G00247000 Rroxscaffold_3G00263120 Rroxscaffold_3G00263150 Rroxscaffold_3G00263160 Rroxscaffold_3G00263170 Rroxscaffold_3G00263180 Rroxscaffold_3G00263190 Rroxscaffold_3G00263210 Rroxscaffold_3G00263230 Rroxscaffold_3G00263260 Rroxscaffold_3G00264110 Rroxscaffold_3G00264130 Rroxscaffold_3G00264160 Rroxscaffold_3G00264180 Rroxscaffold_3G00264200 Rroxscaffold_4G00288750 Rroxscaffold_4G00303110 Rroxscaffold_4G00303120 Rroxscaffold_4G00322280 Rroxscaffold_5G00356200 Rroxscaffold_6G00399150 Rroxscaffold_6G00399290 Rroxscaffold_7G00194770
rosa_rugosa	Rorug01G0225300 Rorug01G0225400 Rorug01G0225800 Rorug01G0226000 Rorug01G0339400 Rorug01G0451500 Rorug03G0196900 Rorug03G0294900 Rorug04G0107500 Rorug04G0107600 Rorug04G0129700 Rorug04G0178000 Rorug05G0144900.1 Rorug05G0145000 Rorug05G0228000 Rorug05G0228600 Rorug06G0078300 Rorug06G0508000 Rorug06G0508100 Rorug06G0508100 Rorug06G0508400 Rorug06G0513400 Rorug07G0000100 Rorug07G0000200 Rorug07G0000300 Rorug07G0000500 Rorug07G0000800
rosa_samantha	Rh1BG060400 Rh1BG210300 Rh1BG210700 Rh1BG210800 Rh1BG309800 Rh1CG223800 Rh1CG224200 Rh1CG325200 Rh1DG237000 Rh1DG237400 Rh1DG341600 Rh2DG365700 Rh3AG212500 Rh3AG248400 Rh3CG239800 Rh3DG239300 Rh4AG169300 Rh4BG166200 Rh4BG240500 Rh4BG240600 Rh4DG163600 Rh5AG249600 Rh5AG249900 Rh5AG250000 Rh5CG283100 Rh5CG283200 Rh5CG283400 Rh5DG259200 Rh5DG259800 Rh6BG197700 Rh6CG197800 Rh6DG189400 Rh7AG114900 Rh7AG115000 Rh7AG115200 Rh7AG115300 Rh7AG115400 Rh7AG115500 Rh7AG123900 Rh7AG124100 Rh7AG124300 Rh7BG117200 Rh7BG117400 Rh7BG118400 Rh7BG125400 Rh7BG125600 Rh7BG125700 Rh7BG125800 Rh7BG125900 Rh7BG126000 Rh7BG126400 Rh7BG126600 Rh7BG126700 Rh7BG166200 Rh7DG118600 Rh7DG118700 Rh7DG118900 Rh7DG119000 Rh7DG119100 Rh7DG127400 Rh7DG127600 Rh7DG127700 Rh7DG127900 Rh7DG128200
rosa_wichuraiana	Rw1G013270 Rw1G020790 Rw2G027890 Rw2G028040 Rw3G019240 Rw4G014070 Rw4G020540 Rw5G021320 Rw5G022970 Rw6G016920 Rw7G010020 Rw7G010040 Rw7G010580 Rw7G010590 Rw7G010600 Rw7G010610 Rw7G010620 Rw7G010630 Rw7G010640 Rw7G010690

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	352
AccB7I	CCANNNNNTGG	1 cut(s)	1627
AccI	GTMKAC	1 cut(s)	1124
AccII	CGCG	4 cut(s)	126, 162, 435, 1332
AciI	CCGC	5 cut(s)	35, 126, 589, 659, 1330
AclI	AACGTT	1 cut(s)	521
AclWI	GGATC	2 cut(s)	178, 1400
AcoI	YGGCCR	2 cut(s)	903, 976
AcsI	RAATTY	1 cut(s)	1029
AcyI	GRCGYC	1 cut(s)	353
AfaI	GTAC	4 cut(s)	368, 575, 647, 988
AfiI	CCNNNNNNNGG	6 cut(s)	125, 175, 418, 668, 1138, 1627
AgsI	TTSAA	8 cut(s)	400, 739, 787, 865, 941, 1028, 1261, 1591
AhdI	GACNNNNNGTC	1 cut(s)	346
AhlI	ACTAGT	1 cut(s)	1309
AjnI	CCWGG	4 cut(s)	1131, 1316, 1528, 1620
AjuI	GAANNNNNNNTTGG	2 cut(s)	779, 811
AluBI	AGCT	6 cut(s)	10, 322, 686, 814, 1153, 1511
AluI	AGCT	6 cut(s)	10, 322, 686, 814, 1153, 1511
Alw26I	GTCTC	4 cut(s)	165, 333, 1206, 1271
AlwI	GGATC	2 cut(s)	178, 1400
AoxI	GGCC	6 cut(s)	72, 190, 903, 976, 1051, 1618
ApeKI	GCWGC	5 cut(s)	322, 630, 650, 653, 1103
ApoI	RAATTY	1 cut(s)	1029
AspLEI	GCGC	4 cut(s)	164, 355, 437, 658
AspS9I	GGNCC	2 cut(s)	72, 191
AsuHPI	GGTGA	3 cut(s)	128, 538, 578
BaeGI	GKGCMC	2 cut(s)	1144, 1317
BalI	TGGCCA	1 cut(s)	905
BanI	GGYRCC	1 cut(s)	352
BarI	GAAGNNNNNNTAC	2 cut(s)	311, 343
BbvCI	CCTCAGC	1 cut(s)	246
BbvI	GCAGC	5 cut(s)	309, 637, 640, 642, 1090
BccI	CCATC	1 cut(s)	1601
BceAI	ACGGC	2 cut(s)	991, 1563
BcgI	CGANNNNNNTGC	2 cut(s)	506, 540
BciT130I	CCWGG	4 cut(s)	1133, 1318, 1530, 1622
BclI	TGATCA	2 cut(s)	583, 1269
BcoDI	GTCTC	4 cut(s)	165, 333, 1206, 1271
BcuI	ACTAGT	1 cut(s)	1309
BfaI	CTAG	5 cut(s)	29, 41, 143, 888, 1310
BfmI	CTRYAG	1 cut(s)	1184
BfoI	RGCGCY	1 cut(s)	356
BisI	GCNGC	6 cut(s)	323, 631, 651, 654, 659, 1104
BlsI	GCNGC	6 cut(s)	324, 632, 652, 655, 660, 1105
BmcAI	AGTACT	1 cut(s)	368
Bme1390I	CCNGG	4 cut(s)	1133, 1318, 1530, 1622
BmeRI	GACNNNNNGTC	1 cut(s)	346
BmgT120I	GGNCC	2 cut(s)	72, 191
BmiI	GGNNCC	4 cut(s)	193, 354, 1302, 1451
BmrFI	CCNGG	4 cut(s)	1133, 1318, 1530, 1622
BmsI	GCATC	1 cut(s)	874
BoxI	GACNNNNGTC	1 cut(s)	308
BpmI	CTGGAG	1 cut(s)	391
Bpu10I	CCTNAGC	2 cut(s)	246, 407
BsaAI	YACGTR	1 cut(s)	1122
BsaHI	GRCGYC	1 cut(s)	353
BsaJI	CCNNGG	5 cut(s)	187, 240, 848, 1316, 1545
BsaWI	WCCGGW	1 cut(s)	1244
BsaXI	ACNNNNNCTCC	2 cut(s)	99, 129
Bsc4I	CCNNNNNNNGG	6 cut(s)	125, 175, 418, 668, 1138, 1627
Bse1I	ACTGG	4 cut(s)	81, 374, 549, 1651
BseBI	CCWGG	4 cut(s)	1133, 1318, 1530, 1622
BseDI	CCNNGG	5 cut(s)	187, 240, 848, 1316, 1545
BseGI	GGATG	2 cut(s)	889, 1240
BseLI	CCNNNNNNNGG	6 cut(s)	125, 175, 418, 668, 1138, 1627
BseMII	CTCAG	4 cut(s)	194, 237, 398, 981
BseNI	ACTGG	4 cut(s)	81, 374, 549, 1651
BseRI	GAGGAG	3 cut(s)	44, 461, 815
BseSI	GKGCMC	2 cut(s)	1144, 1317
BseXI	GCAGC	5 cut(s)	309, 637, 640, 642, 1090
BsgI	GTGCAG	1 cut(s)	1565
Bsh1236I	CGCG	4 cut(s)	126, 162, 435, 1332
BshFI	GGCC	6 cut(s)	74, 192, 905, 978, 1053, 1620
BshNI	GGYRCC	1 cut(s)	352
BsiSI	CCGG	4 cut(s)	5, 1245, 1298, 1442
BsiWI	CGTACG	1 cut(s)	645
BslI	CCNNNNNNNGG	6 cut(s)	125, 175, 418, 668, 1138, 1627
BsmAI	GTCTC	4 cut(s)	165, 333, 1206, 1271
BsmBI	CGTCTC	1 cut(s)	333
BsmI	GAATGC	1 cut(s)	1254
BsnI	GGCC	6 cut(s)	74, 192, 905, 978, 1053, 1620
Bsp1286I	GDGCHC	2 cut(s)	1144, 1317
Bsp143I	GATC	9 cut(s)	183, 261, 465, 583, 693, 727, 790, 1269, 1405
Bsp19I	CCATGG	2 cut(s)	187, 848
BspACI	CCGC	5 cut(s)	35, 126, 589, 659, 1330
BspANI	GGCC	6 cut(s)	74, 192, 905, 978, 1053, 1620
BspCNI	CTCAG	4 cut(s)	193, 238, 399, 982
BspFNI	CGCG	4 cut(s)	126, 162, 435, 1332
BspHI	TCATGA	2 cut(s)	264, 1173
BspLI	GGNNCC	4 cut(s)	193, 354, 1302, 1451
BspMAI	CTGCAG	1 cut(s)	1188
BspPI	GGATC	2 cut(s)	178, 1400
BspQI	GCTCTTC	1 cut(s)	667
BspT107I	GGYRCC	1 cut(s)	352
BsrI	ACTGG	4 cut(s)	81, 374, 549, 1651
BssECI	CCNNGG	5 cut(s)	187, 240, 848, 1316, 1545
BssMI	GATC	9 cut(s)	183, 261, 465, 583, 693, 727, 790, 1269, 1405
BssNAI	GTATAC	1 cut(s)	1125
BssNI	GRCGYC	1 cut(s)	353
BssT1I	CCWWGG	2 cut(s)	187, 848
Bst1107I	GTATAC	1 cut(s)	1125
Bst2UI	CCWGG	4 cut(s)	1133, 1318, 1530, 1622
Bst4CI	ACNGT	3 cut(s)	869, 912, 1381
Bst6I	CTCTTC	6 cut(s)	62, 377, 599, 667, 1396, 1425
BstACI	GRCGYC	1 cut(s)	353
BstBAI	YACGTR	1 cut(s)	1122
BstC8I	GCNNGC	4 cut(s)	628, 663, 855, 1289
BstDEI	CTNAG	6 cut(s)	11, 180, 246, 407, 990, 1145
BstDSI	CCRYGG	3 cut(s)	187, 848, 1545
BstF5I	GGATG	2 cut(s)	889, 1240
BstFNI	CGCG	4 cut(s)	126, 162, 435, 1332
BstH2I	RGCGCY	1 cut(s)	356
BstHHI	GCGC	4 cut(s)	164, 355, 437, 658
BstKTI	GATC	9 cut(s)	186, 264, 468, 586, 696, 730, 793, 1272, 1408
BstMAI	GTCTC	4 cut(s)	165, 333, 1206, 1271
BstMBI	GATC	9 cut(s)	183, 261, 465, 583, 693, 727, 790, 1269, 1405
BstMWI	GCNNNNNNNGC	5 cut(s)	251, 432, 647, 662, 683
BstNI	CCWGG	4 cut(s)	1133, 1318, 1530, 1622
BstNSI	RCATGY	1 cut(s)	950
BstPAI	GACNNNNGTC	1 cut(s)	308
BstSCI	CCNGG	4 cut(s)	1131, 1316, 1528, 1620
BstSFI	CTRYAG	1 cut(s)	1184
BstSLI	GKGCMC	2 cut(s)	1144, 1317
BstSNI	TACGTA	1 cut(s)	1122
BstUI	CGCG	4 cut(s)	126, 162, 435, 1332
BstV1I	GCAGC	5 cut(s)	309, 637, 640, 642, 1090
BstX2I	RGATCY	2 cut(s)	183, 1405
BstYI	RGATCY	2 cut(s)	183, 1405
BstZ17I	GTATAC	1 cut(s)	1125
BsuRI	GGCC	6 cut(s)	74, 192, 905, 978, 1053, 1620
BtgI	CCRYGG	3 cut(s)	187, 848, 1545
BtgZI	GCGATG	1 cut(s)	143
BtsCI	GGATG	2 cut(s)	889, 1240
BtsI	GCAGTG	1 cut(s)	1272
BtsIMutI	CAGTG	3 cut(s)	737, 1272, 1386
Cac8I	GCNNGC	4 cut(s)	628, 663, 855, 1289
CciI	TCATGA	2 cut(s)	264, 1173
CfoI	GCGC	4 cut(s)	164, 355, 437, 658
Cfr13I	GGNCC	2 cut(s)	72, 191
CseI	GACGC	1 cut(s)	336
Csp6I	GTAC	4 cut(s)	367, 574, 646, 987
CviQI	GTAC	4 cut(s)	367, 574, 646, 987
DdeI	CTNAG	6 cut(s)	11, 180, 246, 407, 990, 1145
DinI	GGCGCC	1 cut(s)	354
DpnI	GATC	9 cut(s)	185, 263, 467, 585, 695, 729, 792, 1271, 1407
DpnII	GATC	9 cut(s)	183, 261, 465, 583, 693, 727, 790, 1269, 1405
DriI	GACNNNNNGTC	1 cut(s)	346
EaeI	YGGCCR	2 cut(s)	903, 976
Eam1104I	CTCTTC	6 cut(s)	62, 377, 599, 667, 1396, 1425
Eam1105I	GACNNNNNGTC	1 cut(s)	346
EarI	CTCTTC	6 cut(s)	62, 377, 599, 667, 1396, 1425
Eco105I	TACGTA	1 cut(s)	1122
Eco130I	CCWWGG	2 cut(s)	187, 848
EcoRII	CCWGG	4 cut(s)	1131, 1316, 1528, 1620
EcoT14I	CCWWGG	2 cut(s)	187, 848
EgeI	GGCGCC	1 cut(s)	354
EheI	GGCGCC	1 cut(s)	354
ErhI	CCWWGG	2 cut(s)	187, 848
Esp3I	CGTCTC	1 cut(s)	333
FauI	CCCGC	1 cut(s)	1337
FbaI	TGATCA	2 cut(s)	583, 1269
FblI	GTMKAC	1 cut(s)	1124
Fnu4HI	GCNGC	6 cut(s)	323, 631, 651, 654, 659, 1104
FokI	GGATG	2 cut(s)	896, 1247
Fsp4HI	GCNGC	6 cut(s)	323, 631, 651, 654, 659, 1104
FspBI	CTAG	5 cut(s)	29, 41, 143, 888, 1310
GlaI	GCGC	4 cut(s)	163, 354, 436, 657
GluI	GCNGC	6 cut(s)	323, 631, 651, 654, 659, 1104
GsuI	CTGGAG	1 cut(s)	391
HaeII	RGCGCY	1 cut(s)	356
HaeIII	GGCC	6 cut(s)	74, 192, 905, 978, 1053, 1620
HapII	CCGG	4 cut(s)	5, 1245, 1298, 1442
HgaI	GACGC	1 cut(s)	336
HhaI	GCGC	4 cut(s)	164, 355, 437, 658
Hin1I	GRCGYC	1 cut(s)	353
Hin6I	GCGC	4 cut(s)	162, 353, 435, 656
HinP1I	GCGC	4 cut(s)	162, 353, 435, 656
HindIII	AAGCTT	1 cut(s)	1151
HinfI	GANTC	9 cut(s)	121, 400, 482, 937, 1162, 1195, 1423, 1456, 1640
HpaII	CCGG	4 cut(s)	5, 1245, 1298, 1442
HphI	GGTGA	3 cut(s)	128, 538, 578
Hpy166II	GTNNAC	6 cut(s)	508, 707, 757, 1015, 1125, 1384
Hpy188I	TCNGA	7 cut(s)	170, 183, 338, 961, 1035, 1211, 1461
Hpy188III	TCNNGA	7 cut(s)	118, 265, 406, 941, 1174, 1427, 1453
Hpy8I	GTNNAC	6 cut(s)	508, 707, 757, 1015, 1125, 1384
Hpy99I	CGWCG	1 cut(s)	352
HpyAV	CCTTC	6 cut(s)	111, 143, 215, 1064, 1255, 1512
HpyCH4III	ACNGT	3 cut(s)	869, 912, 1381
HpyCH4IV	ACGT	6 cut(s)	305, 342, 521, 644, 1017, 1121
HpyCH4V	TGCA	5 cut(s)	630, 1186, 1252, 1291, 1582
HpyF10VI	GCNNNNNNNGC	5 cut(s)	251, 432, 647, 662, 683
HpyF3I	CTNAG	6 cut(s)	11, 180, 246, 407, 990, 1145
HpySE526I	ACGT	6 cut(s)	305, 342, 521, 644, 1017, 1121
Hsp92I	GRCGYC	1 cut(s)	353
HspAI	GCGC	4 cut(s)	162, 353, 435, 656
KasI	GGCGCC	1 cut(s)	352
Ksp22I	TGATCA	2 cut(s)	583, 1269
Kzo9I	GATC	9 cut(s)	183, 261, 465, 583, 693, 727, 790, 1269, 1405
LguI	GCTCTTC	1 cut(s)	667
LmnI	GCTCC	5 cut(s)	7, 207, 1306, 1508, 1610
Lsp1109I	GCAGC	5 cut(s)	309, 637, 640, 642, 1090
LweI	GCATC	1 cut(s)	874
MaeI	CTAG	5 cut(s)	29, 41, 143, 888, 1310
MaeII	ACGT	6 cut(s)	305, 342, 521, 644, 1017, 1121
MaeIII	GTNAC	6 cut(s)	24, 147, 544, 1305, 1349, 1375
MalI	GATC	9 cut(s)	185, 263, 467, 585, 695, 729, 792, 1271, 1407
MboI	GATC	9 cut(s)	183, 261, 465, 583, 693, 727, 790, 1269, 1405
MboII	GAAGA	9 cut(s)	49, 394, 477, 607, 616, 684, 703, 1413, 1442
MfeI	CAATTG	1 cut(s)	1591
MflI	RGATCY	2 cut(s)	183, 1405
MhlI	GDGCHC	2 cut(s)	1144, 1317
MlsI	TGGCCA	1 cut(s)	905
MluCI	AATT	6 cut(s)	331, 457, 1029, 1586, 1591, 1598
MluNI	TGGCCA	1 cut(s)	905
Mly113I	GGCGCC	1 cut(s)	353
MmeI	TCCRAC	4 cut(s)	315, 777, 1189, 1516
Mox20I	TGGCCA	1 cut(s)	905
MscI	TGGCCA	1 cut(s)	905
MseI	TTAA	5 cut(s)	456, 1157, 1359, 1554, 1677
Msp20I	TGGCCA	1 cut(s)	905
MspI	CCGG	4 cut(s)	5, 1245, 1298, 1442
MspR9I	CCNGG	4 cut(s)	1133, 1318, 1530, 1622
MunI	CAATTG	1 cut(s)	1591
Mva1269I	GAATGC	1 cut(s)	1254
MvaI	CCWGG	4 cut(s)	1133, 1318, 1530, 1622
MvnI	CGCG	4 cut(s)	126, 162, 435, 1332
MwoI	GCNNNNNNNGC	5 cut(s)	251, 432, 647, 662, 683
NarI	GGCGCC	1 cut(s)	353
NcoI	CCATGG	2 cut(s)	187, 848
NdeII	GATC	9 cut(s)	183, 261, 465, 583, 693, 727, 790, 1269, 1405
NlaIV	GGNNCC	4 cut(s)	193, 354, 1302, 1451
NmeAIII	GCCGAG	1 cut(s)	221
NmuCI	GTSAC	3 cut(s)	24, 544, 1375
NspI	RCATGY	1 cut(s)	950
PagI	TCATGA	2 cut(s)	264, 1173
PciSI	GCTCTTC	1 cut(s)	667
PcsI	WCGNNNNNNNCGW	1 cut(s)	166
PctI	GAATGC	1 cut(s)	1254
PfeI	GAWTC	9 cut(s)	121, 400, 482, 937, 1162, 1195, 1423, 1456, 1640
Pfl23II	CGTACG	1 cut(s)	645
PflMI	CCANNNNNTGG	1 cut(s)	1627
PfoI	TCCNGGA	1 cut(s)	1131
PkrI	GCNGC	6 cut(s)	324, 632, 652, 655, 660, 1105
PluTI	GGCGCC	1 cut(s)	356
Ppu21I	YACGTR	1 cut(s)	1122
PshAI	GACNNNNGTC	1 cut(s)	308
Psp1406I	AACGTT	1 cut(s)	521
Psp6I	CCWGG	4 cut(s)	1131, 1316, 1528, 1620
PspGI	CCWGG	4 cut(s)	1131, 1316, 1528, 1620
PspLI	CGTACG	1 cut(s)	645
PspN4I	GGNNCC	4 cut(s)	193, 354, 1302, 1451
PspPI	GGNCC	2 cut(s)	72, 191
PsrI	GAACNNNNNNTAC	2 cut(s)	1102, 1134
PstI	CTGCAG	1 cut(s)	1188
PsuI	RGATCY	2 cut(s)	183, 1405
RsaI	GTAC	4 cut(s)	368, 575, 647, 988
RsaNI	GTAC	4 cut(s)	367, 574, 646, 987
SapI	GCTCTTC	1 cut(s)	667
SaqAI	TTAA	5 cut(s)	456, 1157, 1359, 1554, 1677
SatI	GCNGC	6 cut(s)	323, 631, 651, 654, 659, 1104
Sau3AI	GATC	9 cut(s)	183, 261, 465, 583, 693, 727, 790, 1269, 1405
Sau96I	GGNCC	2 cut(s)	72, 191
ScaI	AGTACT	1 cut(s)	368
ScrFI	CCNGG	4 cut(s)	1133, 1318, 1530, 1622
SduI	GDGCHC	2 cut(s)	1144, 1317
SfaNI	GCATC	1 cut(s)	874
SfcI	CTRYAG	1 cut(s)	1184
SfoI	GGCGCC	1 cut(s)	354
SnaBI	TACGTA	1 cut(s)	1122
SpeI	ACTAGT	1 cut(s)	1309
Sse9I	AATT	6 cut(s)	331, 457, 1029, 1586, 1591, 1598
SsiI	CCGC	5 cut(s)	35, 126, 589, 659, 1330
SspDI	GGCGCC	1 cut(s)	352
SspI	AATATT	1 cut(s)	832
SspMI	CTAG	5 cut(s)	29, 41, 143, 888, 1310
StyD4I	CCNGG	4 cut(s)	1131, 1316, 1528, 1620
StyI	CCWWGG	2 cut(s)	187, 848
TaaI	ACNGT	3 cut(s)	869, 912, 1381
TaiI	ACGT	6 cut(s)	308, 345, 524, 647, 1020, 1124
TaqI	TCGA	4 cut(s)	461, 468, 718, 1062
TasI	AATT	6 cut(s)	331, 457, 1029, 1586, 1591, 1598
TatI	WGTACW	2 cut(s)	366, 573
TauI	GCSGC	1 cut(s)	661
TfiI	GAWTC	9 cut(s)	121, 400, 482, 937, 1162, 1195, 1423, 1456, 1640
Tru1I	TTAA	5 cut(s)	456, 1157, 1359, 1554, 1677
Tru9I	TTAA	5 cut(s)	456, 1157, 1359, 1554, 1677
TscAI	CASTG	3 cut(s)	737, 1272, 1386
TseFI	GTSAC	3 cut(s)	24, 544, 1375
TseI	GCWGC	5 cut(s)	322, 630, 650, 653, 1103
Tsp45I	GTSAC	3 cut(s)	24, 544, 1375
TspDTI	ATGAA	6 cut(s)	281, 395, 477, 704, 887, 1691
TspGWI	ACGGA	3 cut(s)	1244, 1293, 1652
TspRI	CASTG	3 cut(s)	737, 1272, 1386
Van91I	CCANNNNNTGG	1 cut(s)	1627
XapI	RAATTY	1 cut(s)	1029
XceI	RCATGY	1 cut(s)	950
XcmI	CCANNNNNNNNNTGG	1 cut(s)	855
XmiI	GTMKAC	1 cut(s)	1124
XspI	CTAG	5 cut(s)	29, 41, 143, 888, 1310
ZrmI	AGTACT	1 cut(s)	368

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.