Cytochrome p450
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| NAM | PF02365 | 24 - 150 | 9.1e-49 | No apical meristem (NAM) protein |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 582 |
| AccB1I | GGYRCC | 3 cut(s) | 582, 965, 1019 |
| AccII | CGCG | 3 cut(s) | 159, 255, 396 |
| AclWI | GGATC | 1 cut(s) | 12 |
| AcoI | YGGCCR | 1 cut(s) | 397 |
| AcuI | CTGAAG | 2 cut(s) | 229, 318 |
| AcvI | CACGTG | 1 cut(s) | 742 |
| AcyI | GRCGYC | 2 cut(s) | 966, 1020 |
| AfaI | GTAC | 6 cut(s) | 239, 308, 443, 584, 727, 1079 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 130, 309, 366, 962 |
| AflIII | ACRYGT | 1 cut(s) | 741 |
| AgsI | TTSAA | 2 cut(s) | 452, 790 |
| AjnI | CCWGG | 4 cut(s) | 479, 489, 900, 1037 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 365, 397 |
| AluBI | AGCT | 9 cut(s) | 37, 114, 202, 345, 404, 600, 708, 916, 999 |
| AluI | AGCT | 9 cut(s) | 37, 114, 202, 345, 404, 600, 708, 916, 999 |
| Alw21I | GWGCWC | 3 cut(s) | 406, 741, 1001 |
| Alw26I | GTCTC | 2 cut(s) | 625, 900 |
| AlwI | GGATC | 1 cut(s) | 12 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 940 |
| Ama87I | CYCGRG | 1 cut(s) | 730 |
| AoxI | GGCC | 6 cut(s) | 274, 397, 454, 525, 868, 1059 |
| ApeKI | GCWGC | 6 cut(s) | 199, 708, 829, 916, 943, 1025 |
| Asp718I | GGTACC | 1 cut(s) | 582 |
| AspLEI | GCGC | 3 cut(s) | 161, 968, 1022 |
| AspS9I | GGNCC | 3 cut(s) | 542, 573, 1049 |
| AsuC2I | CCSGG | 2 cut(s) | 75, 304 |
| AsuHPI | GGTGA | 2 cut(s) | 41, 685 |
| AvaI | CYCGRG | 1 cut(s) | 730 |
| AvaII | GGWCC | 3 cut(s) | 542, 573, 1049 |
| AxyI | CCTNAGG | 1 cut(s) | 890 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 709, 742 |
| BanI | GGYRCC | 3 cut(s) | 582, 965, 1019 |
| BanII | GRGCYC | 4 cut(s) | 406, 597, 1001, 1038 |
| BbrPI | CACGTG | 1 cut(s) | 742 |
| BbsI | GAAGAC | 2 cut(s) | 383, 563 |
| Bbv12I | GWGCWC | 3 cut(s) | 406, 741, 1001 |
| BbvI | GCAGC | 6 cut(s) | 211, 695, 841, 903, 955, 1012 |
| BccI | CCATC | 3 cut(s) | 33, 214, 801 |
| BceAI | ACGGC | 1 cut(s) | 694 |
| BciT130I | CCWGG | 4 cut(s) | 481, 491, 902, 1039 |
| BclI | TGATCA | 1 cut(s) | 31 |
| BcnI | CCSGG | 2 cut(s) | 75, 304 |
| BcoDI | GTCTC | 2 cut(s) | 625, 900 |
| BfmI | CTRYAG | 1 cut(s) | 941 |
| BfoI | RGCGCY | 2 cut(s) | 969, 1023 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 453 |
| Bme1390I | CCNGG | 6 cut(s) | 75, 304, 481, 491, 902, 1039 |
| Bme18I | GGWCC | 3 cut(s) | 542, 573, 1049 |
| BmeT110I | CYCGRG | 1 cut(s) | 730 |
| BmgT120I | GGNCC | 3 cut(s) | 542, 573, 1049 |
| BmiI | GGNNCC | 7 cut(s) | 544, 574, 584, 967, 976, 1021, 1050 |
| BmrFI | CCNGG | 6 cut(s) | 75, 304, 481, 491, 902, 1039 |
| BmrI | ACTGGG | 1 cut(s) | 436 |
| BmuI | ACTGGG | 1 cut(s) | 436 |
| BpiI | GAAGAC | 2 cut(s) | 383, 563 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 584, 616 |
| BpmI | CTGGAG | 3 cut(s) | 884, 896, 1015 |
| BpuMI | CCSGG | 2 cut(s) | 75, 304 |
| BsaAI | YACGTR | 1 cut(s) | 742 |
| BsaHI | GRCGYC | 2 cut(s) | 966, 1020 |
| BsaI | GGTCTC | 1 cut(s) | 900 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 218, 248, 695, 725, 728, 752, 758, 782 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 130, 309, 366, 962 |
| Bse118I | RCCGGY | 2 cut(s) | 779, 968 |
| Bse1I | ACTGG | 5 cut(s) | 277, 314, 431, 998, 1016 |
| Bse21I | CCTNAGG | 1 cut(s) | 890 |
| Bse3DI | GCAATG | 2 cut(s) | 544, 688 |
| BseBI | CCWGG | 4 cut(s) | 481, 491, 902, 1039 |
| BseGI | GGATG | 1 cut(s) | 375 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 130, 309, 366, 962 |
| BseMI | GCAATG | 2 cut(s) | 544, 688 |
| BseMII | CTCAG | 2 cut(s) | 198, 904 |
| BseNI | ACTGG | 5 cut(s) | 277, 314, 431, 998, 1016 |
| BseRI | GAGGAG | 3 cut(s) | 113, 604, 634 |
| BseX3I | CGGCCG | 1 cut(s) | 397 |
| BseXI | GCAGC | 6 cut(s) | 211, 695, 841, 903, 955, 1012 |
| BseYI | CCCAGC | 2 cut(s) | 586, 596 |
| Bsh1236I | CGCG | 3 cut(s) | 159, 255, 396 |
| Bsh1285I | CGRYCG | 3 cut(s) | 22, 400, 700 |
| BshFI | GGCC | 6 cut(s) | 276, 399, 456, 527, 870, 1061 |
| BshNI | GGYRCC | 3 cut(s) | 582, 965, 1019 |
| BsiEI | CGRYCG | 3 cut(s) | 22, 400, 700 |
| BsiHKAI | GWGCWC | 3 cut(s) | 406, 741, 1001 |
| BsiHKCI | CYCGRG | 1 cut(s) | 730 |
| BsiSI | CCGG | 5 cut(s) | 74, 303, 780, 963, 969 |
| BslFI | GGGAC | 2 cut(s) | 650, 951 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 130, 309, 366, 962 |
| BsmAI | GTCTC | 2 cut(s) | 625, 900 |
| BsmFI | GGGAC | 2 cut(s) | 650, 951 |
| BsnI | GGCC | 6 cut(s) | 276, 399, 456, 527, 870, 1061 |
| Bso31I | GGTCTC | 1 cut(s) | 900 |
| BsoBI | CYCGRG | 1 cut(s) | 730 |
| Bsp1286I | GDGCHC | 5 cut(s) | 406, 597, 741, 1001, 1038 |
| Bsp143I | GATC | 2 cut(s) | 4, 31 |
| Bsp19I | CCATGG | 1 cut(s) | 194 |
| BspANI | GGCC | 6 cut(s) | 276, 399, 456, 527, 870, 1061 |
| BspCNI | CTCAG | 2 cut(s) | 199, 903 |
| BspFNI | CGCG | 3 cut(s) | 159, 255, 396 |
| BspHI | TCATGA | 2 cut(s) | 9, 798 |
| BspLI | GGNNCC | 7 cut(s) | 544, 574, 584, 967, 976, 1021, 1050 |
| BspMAI | CTGCAG | 1 cut(s) | 945 |
| BspPI | GGATC | 1 cut(s) | 12 |
| BspQI | GCTCTTC | 2 cut(s) | 527, 1026 |
| BspT107I | GGYRCC | 3 cut(s) | 582, 965, 1019 |
| BspTNI | GGTCTC | 1 cut(s) | 900 |
| BsrDI | GCAATG | 2 cut(s) | 544, 688 |
| BsrFI | RCCGGY | 2 cut(s) | 779, 968 |
| BsrI | ACTGG | 5 cut(s) | 277, 314, 431, 998, 1016 |
| BssAI | RCCGGY | 2 cut(s) | 779, 968 |
| BssMI | GATC | 2 cut(s) | 4, 31 |
| BssNI | GRCGYC | 2 cut(s) | 966, 1020 |
| BssT1I | CCWWGG | 3 cut(s) | 194, 364, 408 |
| Bst2UI | CCWGG | 4 cut(s) | 481, 491, 902, 1039 |
| Bst4CI | ACNGT | 5 cut(s) | 44, 290, 664, 701, 725 |
| Bst6I | CTCTTC | 3 cut(s) | 489, 527, 1026 |
| BstACI | GRCGYC | 2 cut(s) | 966, 1020 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 940 |
| BstBAI | YACGTR | 1 cut(s) | 742 |
| BstC8I | GCNNGC | 2 cut(s) | 191, 602 |
| BstDEI | CTNAG | 3 cut(s) | 207, 808, 890 |
| BstDSI | CCRYGG | 2 cut(s) | 194, 394 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 128 |
| BstF5I | GGATG | 1 cut(s) | 375 |
| BstFNI | CGCG | 3 cut(s) | 159, 255, 396 |
| BstH2I | RGCGCY | 2 cut(s) | 969, 1023 |
| BstHHI | GCGC | 3 cut(s) | 161, 968, 1022 |
| BstKTI | GATC | 2 cut(s) | 7, 34 |
| BstMAI | GTCTC | 2 cut(s) | 625, 900 |
| BstMBI | GATC | 2 cut(s) | 4, 31 |
| BstMCI | CGRYCG | 3 cut(s) | 22, 400, 700 |
| BstNI | CCWGG | 4 cut(s) | 481, 491, 902, 1039 |
| BstNSI | RCATGY | 1 cut(s) | 1072 |
| BstSCI | CCNGG | 6 cut(s) | 73, 302, 479, 489, 900, 1037 |
| BstSFI | CTRYAG | 1 cut(s) | 941 |
| BstUI | CGCG | 3 cut(s) | 159, 255, 396 |
| BstV1I | GCAGC | 6 cut(s) | 211, 695, 841, 903, 955, 1012 |
| BstV2I | GAAGAC | 2 cut(s) | 383, 563 |
| BstX2I | RGATCY | 1 cut(s) | 4 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 854, 1045 |
| BstYI | RGATCY | 1 cut(s) | 4 |
| BstZI | CGGCCG | 1 cut(s) | 397 |
| Bsu36I | CCTNAGG | 1 cut(s) | 890 |
| BsuRI | GGCC | 6 cut(s) | 276, 399, 456, 527, 870, 1061 |
| BtgI | CCRYGG | 2 cut(s) | 194, 394 |
| BtsCI | GGATG | 1 cut(s) | 375 |
| BtsI | GCAGTG | 1 cut(s) | 623 |
| BtsIMutI | CAGTG | 2 cut(s) | 294, 623 |
| Cac8I | GCNNGC | 2 cut(s) | 191, 602 |
| CaiI | CAGNNNCTG | 1 cut(s) | 940 |
| CciI | TCATGA | 2 cut(s) | 9, 798 |
| CfoI | GCGC | 3 cut(s) | 161, 968, 1022 |
| Cfr10I | RCCGGY | 2 cut(s) | 779, 968 |
| Cfr13I | GGNCC | 3 cut(s) | 542, 573, 1049 |
| Cfr42I | CCGCGG | 1 cut(s) | 397 |
| Csp6I | GTAC | 6 cut(s) | 238, 307, 442, 583, 726, 1078 |
| CviAII | CATG | 7 cut(s) | 10, 136, 195, 433, 437, 799, 1069 |
| CviQI | GTAC | 6 cut(s) | 238, 307, 442, 583, 726, 1078 |
| DdeI | CTNAG | 3 cut(s) | 207, 808, 890 |
| DinI | GGCGCC | 2 cut(s) | 967, 1021 |
| DpnI | GATC | 2 cut(s) | 6, 33 |
| DpnII | GATC | 2 cut(s) | 4, 31 |
| EaeI | YGGCCR | 1 cut(s) | 397 |
| EagI | CGGCCG | 1 cut(s) | 397 |
| Eam1104I | CTCTTC | 3 cut(s) | 489, 527, 1026 |
| EarI | CTCTTC | 3 cut(s) | 489, 527, 1026 |
| EciI | GGCGGA | 2 cut(s) | 760, 810 |
| Ecl136II | GAGCTC | 2 cut(s) | 404, 999 |
| EclXI | CGGCCG | 1 cut(s) | 397 |
| Eco130I | CCWWGG | 3 cut(s) | 194, 364, 408 |
| Eco24I | GRGCYC | 4 cut(s) | 406, 597, 1001, 1038 |
| Eco31I | GGTCTC | 1 cut(s) | 900 |
| Eco47I | GGWCC | 3 cut(s) | 542, 573, 1049 |
| Eco52I | CGGCCG | 1 cut(s) | 397 |
| Eco53kI | GAGCTC | 2 cut(s) | 404, 999 |
| Eco57I | CTGAAG | 2 cut(s) | 229, 318 |
| Eco72I | CACGTG | 1 cut(s) | 742 |
| Eco81I | CCTNAGG | 1 cut(s) | 890 |
| Eco88I | CYCGRG | 1 cut(s) | 730 |
| EcoICRI | GAGCTC | 2 cut(s) | 404, 999 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 128 |
| EcoRII | CCWGG | 4 cut(s) | 479, 489, 900, 1037 |
| EcoT14I | CCWWGG | 3 cut(s) | 194, 364, 408 |
| EcoT22I | ATGCAT | 1 cut(s) | 438 |
| EcoT38I | GRGCYC | 4 cut(s) | 406, 597, 1001, 1038 |
| EgeI | GGCGCC | 2 cut(s) | 967, 1021 |
| EheI | GGCGCC | 2 cut(s) | 967, 1021 |
| ErhI | CCWWGG | 3 cut(s) | 194, 364, 408 |
| FaeI | CATG | 7 cut(s) | 13, 139, 198, 436, 440, 802, 1072 |
| FaiI | YATR | 8 cut(s) | 11, 137, 164, 196, 434, 438, 800, 1070 |
| FaqI | GGGAC | 2 cut(s) | 650, 951 |
| FatI | CATG | 7 cut(s) | 9, 135, 194, 432, 436, 798, 1068 |
| FauI | CCCGC | 2 cut(s) | 572, 939 |
| FbaI | TGATCA | 1 cut(s) | 31 |
| FokI | GGATG | 1 cut(s) | 382 |
| FriOI | GRGCYC | 4 cut(s) | 406, 597, 1001, 1038 |
| GlaI | GCGC | 3 cut(s) | 160, 967, 1021 |
| GsaI | CCCAGC | 2 cut(s) | 590, 600 |
| GsuI | CTGGAG | 3 cut(s) | 884, 896, 1015 |
| HaeII | RGCGCY | 2 cut(s) | 969, 1023 |
| HaeIII | GGCC | 6 cut(s) | 276, 399, 456, 527, 870, 1061 |
| HapII | CCGG | 5 cut(s) | 74, 303, 780, 963, 969 |
| HhaI | GCGC | 3 cut(s) | 161, 968, 1022 |
| Hin1I | GRCGYC | 2 cut(s) | 966, 1020 |
| Hin1II | CATG | 7 cut(s) | 13, 139, 198, 436, 440, 802, 1072 |
| Hin6I | GCGC | 3 cut(s) | 159, 966, 1020 |
| HinP1I | GCGC | 3 cut(s) | 159, 966, 1020 |
| HincII | GTYRAC | 1 cut(s) | 175 |
| HindII | GTYRAC | 1 cut(s) | 175 |
| HinfI | GANTC | 5 cut(s) | 140, 548, 641, 767, 907 |
| HpaII | CCGG | 5 cut(s) | 74, 303, 780, 963, 969 |
| HphI | GGTGA | 2 cut(s) | 41, 685 |
| Hpy166II | GTNNAC | 3 cut(s) | 49, 175, 1074 |
| Hpy188I | TCNGA | 4 cut(s) | 97, 877, 885, 1007 |
| Hpy188III | TCNNGA | 4 cut(s) | 10, 29, 520, 799 |
| Hpy8I | GTNNAC | 3 cut(s) | 49, 175, 1074 |
| Hpy99I | CGWCG | 1 cut(s) | 101 |
| HpyAV | CCTTC | 7 cut(s) | 102, 287, 446, 517, 615, 931, 988 |
| HpyCH4III | ACNGT | 5 cut(s) | 44, 290, 664, 701, 725 |
| HpyCH4IV | ACGT | 2 cut(s) | 741, 1076 |
| HpyCH4V | TGCA | 3 cut(s) | 436, 943, 1068 |
| HpyF3I | CTNAG | 3 cut(s) | 207, 808, 890 |
| HpySE526I | ACGT | 2 cut(s) | 741, 1076 |
| Hsp92I | GRCGYC | 2 cut(s) | 966, 1020 |
| Hsp92II | CATG | 7 cut(s) | 13, 139, 198, 436, 440, 802, 1072 |
| HspAI | GCGC | 3 cut(s) | 159, 966, 1020 |
| KasI | GGCGCC | 2 cut(s) | 965, 1019 |
| KpnI | GGTACC | 1 cut(s) | 586 |
| Ksp22I | TGATCA | 1 cut(s) | 31 |
| KspI | CCGCGG | 1 cut(s) | 397 |
| Kzo9I | GATC | 2 cut(s) | 4, 31 |
| LguI | GCTCTTC | 2 cut(s) | 527, 1026 |
| LmnI | GCTCC | 9 cut(s) | 207, 350, 409, 716, 736, 823, 849, 980, 996 |
| Lsp1109I | GCAGC | 6 cut(s) | 211, 695, 841, 903, 955, 1012 |
| MaeII | ACGT | 2 cut(s) | 741, 1076 |
| MaeIII | GTNAC | 2 cut(s) | 422, 701 |
| MalI | GATC | 2 cut(s) | 6, 33 |
| MboI | GATC | 2 cut(s) | 4, 31 |
| MflI | RGATCY | 1 cut(s) | 4 |
| MhlI | GDGCHC | 5 cut(s) | 406, 597, 741, 1001, 1038 |
| MluCI | AATT | 1 cut(s) | 469 |
| Mly113I | GGCGCC | 2 cut(s) | 966, 1020 |
| MlyI | GAGTC | 3 cut(s) | 134, 635, 761 |
| MmeI | TCCRAC | 4 cut(s) | 120, 168, 699, 1076 |
| Mph1103I | ATGCAT | 1 cut(s) | 438 |
| MspA1I | CMGCKG | 5 cut(s) | 396, 579, 708, 916, 1025 |
| MspI | CCGG | 5 cut(s) | 74, 303, 780, 963, 969 |
| MspR9I | CCNGG | 6 cut(s) | 75, 304, 481, 491, 902, 1039 |
| MvaI | CCWGG | 4 cut(s) | 481, 491, 902, 1039 |
| MvnI | CGCG | 3 cut(s) | 159, 255, 396 |
| NarI | GGCGCC | 2 cut(s) | 966, 1020 |
| NciI | CCSGG | 2 cut(s) | 75, 304 |
| NcoI | CCATGG | 1 cut(s) | 194 |
| NdeII | GATC | 2 cut(s) | 4, 31 |
| NlaIII | CATG | 7 cut(s) | 13, 139, 198, 436, 440, 802, 1072 |
| NlaIV | GGNNCC | 7 cut(s) | 544, 574, 584, 967, 976, 1021, 1050 |
| NmeAIII | GCCGAG | 3 cut(s) | 425, 616, 966 |
| NmuCI | GTSAC | 1 cut(s) | 701 |
| NsiI | ATGCAT | 1 cut(s) | 438 |
| NspI | RCATGY | 1 cut(s) | 1072 |
| PagI | TCATGA | 2 cut(s) | 9, 798 |
| PasI | CCCWGGG | 1 cut(s) | 1038 |
| PciSI | GCTCTTC | 2 cut(s) | 527, 1026 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 286, 881, 987 |
| PfeI | GAWTC | 2 cut(s) | 548, 907 |
| PfoI | TCCNGGA | 1 cut(s) | 900 |
| PleI | GAGTC | 3 cut(s) | 134, 635, 761 |
| PluTI | GGCGCC | 2 cut(s) | 969, 1023 |
| PmaCI | CACGTG | 1 cut(s) | 742 |
| PmlI | CACGTG | 1 cut(s) | 742 |
| PpsI | GAGTC | 3 cut(s) | 134, 635, 761 |
| Ppu21I | YACGTR | 1 cut(s) | 742 |
| Psp124BI | GAGCTC | 2 cut(s) | 406, 1001 |
| Psp6I | CCWGG | 4 cut(s) | 479, 489, 900, 1037 |
| PspCI | CACGTG | 1 cut(s) | 742 |
| PspFI | CCCAGC | 2 cut(s) | 586, 596 |
| PspGI | CCWGG | 4 cut(s) | 479, 489, 900, 1037 |
| PspN4I | GGNNCC | 7 cut(s) | 544, 574, 584, 967, 976, 1021, 1050 |
| PspPI | GGNCC | 3 cut(s) | 542, 573, 1049 |
| PstI | CTGCAG | 1 cut(s) | 945 |
| PstNI | CAGNNNCTG | 1 cut(s) | 940 |
| PsuI | RGATCY | 1 cut(s) | 4 |
| PvuII | CAGCTG | 2 cut(s) | 708, 916 |
| RsaI | GTAC | 6 cut(s) | 239, 308, 443, 584, 727, 1079 |
| RsaNI | GTAC | 6 cut(s) | 238, 307, 442, 583, 726, 1078 |
| SacI | GAGCTC | 2 cut(s) | 406, 1001 |
| SacII | CCGCGG | 1 cut(s) | 397 |
| SapI | GCTCTTC | 2 cut(s) | 527, 1026 |
| Sau3AI | GATC | 2 cut(s) | 4, 31 |
| Sau96I | GGNCC | 3 cut(s) | 542, 573, 1049 |
| SchI | GAGTC | 3 cut(s) | 134, 635, 761 |
| ScrFI | CCNGG | 6 cut(s) | 75, 304, 481, 491, 902, 1039 |
| SduI | GDGCHC | 5 cut(s) | 406, 597, 741, 1001, 1038 |
| SfcI | CTRYAG | 1 cut(s) | 941 |
| SfoI | GGCGCC | 2 cut(s) | 967, 1021 |
| Sfr303I | CCGCGG | 1 cut(s) | 397 |
| SgrAI | CRCCGGYG | 1 cut(s) | 968 |
| SgrBI | CCGCGG | 1 cut(s) | 397 |
| SinI | GGWCC | 3 cut(s) | 542, 573, 1049 |
| Sse9I | AATT | 1 cut(s) | 469 |
| SspDI | GGCGCC | 2 cut(s) | 965, 1019 |
| SstI | GAGCTC | 2 cut(s) | 406, 1001 |
| StyD4I | CCNGG | 6 cut(s) | 73, 302, 479, 489, 900, 1037 |
| StyI | CCWWGG | 3 cut(s) | 194, 364, 408 |
| TaaI | ACNGT | 5 cut(s) | 44, 290, 664, 701, 725 |
| TaiI | ACGT | 2 cut(s) | 744, 1079 |
| TaqI | TCGA | 3 cut(s) | 509, 639, 981 |
| TaqII | GACCGA | 2 cut(s) | 8, 345 |
| TasI | AATT | 1 cut(s) | 469 |
| TauI | GCSGC | 8 cut(s) | 73, 399, 826, 829, 835, 861, 870, 1025 |
| TfiI | GAWTC | 2 cut(s) | 548, 907 |
| TscAI | CASTG | 2 cut(s) | 301, 630 |
| TseFI | GTSAC | 1 cut(s) | 701 |
| TseI | GCWGC | 6 cut(s) | 199, 708, 829, 916, 943, 1025 |
| Tsp45I | GTSAC | 1 cut(s) | 701 |
| TspDTI | ATGAA | 2 cut(s) | 26, 386 |
| TspRI | CASTG | 2 cut(s) | 301, 630 |
| VpaK11BI | GGWCC | 3 cut(s) | 542, 573, 1049 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 128 |
| XceI | RCATGY | 1 cut(s) | 1072 |
| Zsp2I | ATGCAT | 1 cut(s) | 438 |