RchiOBHm_Chr7g0197311

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Reverse (-)
15298074 .. 15298595
522 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ17651

Sequence Viewer

Length: 522 bp
ATGAGCAAATTGCAGAATGAGGTTAGGGAAGTAGTGGGTAACAAAACACACTTAACAGAAGACGATCTCATCGGAATGAACTACTTGAGGGCTGTGATCAAGGAGACTCTTCGCTTACATCCTCCACTTTCTATAATATTGAGGATGTCAACCGAAGATGTGAATATAAAAGGTTACAACATCAAAGCCAACACGCGAGTAAGAATGAACGTGTGGCAAATTGGAAGAGATCCAATGTCATACAACAAAGCAGAGGAGTTCGAGCCAGAAAGGTTCTTGAATAGTCGACGTCCAATAGATTATAAGGGGAATGACTTCCAGTTGATTCCATTTGGTGTTGGCAGGAGGGGTTGTCCAGGAAGCCATTTCGCCATATCTGCTGCTGAGATAGCTTTAGCAAGTTTGGTGCACAAGTTCGATTGGGCATTGCCAGACGAATCAAAACCACAGGAGTTTGACATGACTGAATCCATTCACTACACCAATTTTGTTATCAGACAACGGCAGAAAACCGTTGTGTGA

Protein Analysis

173

Amino Acids

20.0

Weight (kDa)

8.69

Isoelectric Point (pI)

56.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 2 - 156 5.3e-48 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000061)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G48270 AT3G48280 AT3G48290 AT3G48290 AT3G48300 AT3G48300 AT3G48310 AT3G48320 AT4G20235 AT4G20235
fragaria_vesca FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g36190 FvH4_3g14160 FvH4_3g14210 FvH4_3g14260 FvH4_3g14260 FvH4_3g21100 FvH4_3g21380 FvH4_4g24460 FvH4_4g24500 FvH4_5g06571 FvH4_5g06571 FvH4_5g06571 FvH4_5g06571 FvH4_5g06572 FvH4_5g06573 FvH4_5g06574 FvH4_5g06575 FvH4_5g06576 FvH4_5g06577 FvH4_5g06577 FvH4_5g07540 FvH4_5g07550 FvH4_5g07560 FvH4_5g07570 FvH4_5g29491 FvH4_5g29492 FvH4_6g23870 FvH4_6g23880 FvH4_6g26870 FvH4_7g11861 FvH4_7g11862 FvH4_7g13050 FvH4_7g13060 FvH4_7g13080 FvH4_7g13080 FvH4_7g22630 FvH4_7g22650 FvH4_7g22651 FvH4_7g23020
malus_domestica MD03G1207400.v1.1 MD03G1214800.v1.1 MD03G1218500.v1.1 MD06G1163100.v1.1 MD06G1163300.v1.1 MD06G1163400.v1.1 MD06G1163500.v1.1 MD06G1163600.v1.1 MD06G1163800.v1.1 MD06G1164000.v1.1 MD06G1164100.v1.1 MD06G1224400.v1.1 MD08G1222800.v1.1 MD08G1222900.v1.1 MD08G1223100.v1.1 MD11G1091500.v1.1 MD11G1091800.v1.1 MD14G1163200.v1.1 MD14G1169000.v1.1 MD15G1207200.v1.1 MD15G1207300.v1.1 MD17G1259400.v1.1
prunus_persica Prupe.4G198100_v2.0.a1 Prupe.4G199100_v2.0.a1 Prupe.4G199400_v2.0.a1 Prupe.4G199800_v2.0.a1 Prupe.4G225200_v2.0.a1 Prupe.4G239100_v2.0.a1 Prupe.5G156600_v2.0.a1 Prupe.5G163500_v2.0.a1 Prupe.7G209500_v2.0.a1 Prupe.I003400_v2.0.a1
pyrus_communis pycom03g16340 pycom06g14600 pycom06g14610 pycom06g14620 pycom06g14630 pycom06g14640 pycom06g14670 pycom06g14690 pycom08g19390 pycom08g19400 pycom08g19410 pycom11g07600 pycom11g07610 pycom11g07620 pycom11g07660 pycom14g13580 pycom14g14080 pycom14g14100 pycom14g14110 pycom15g18380 pycom17g26080
rosa_chinensis RchiOBHm_Chr1g0339441 RchiOBHm_Chr1g0339451 RchiOBHm_Chr1g0352191 RchiOBHm_Chr1g0368221 RchiOBHm_Chr2g0129531 RchiOBHm_Chr2g0129541 RchiOBHm_Chr3g0477631 RchiOBHm_Chr3g0482551 RchiOBHm_Chr3g0482561 RchiOBHm_Chr3g0482571 RchiOBHm_Chr4g0411601 RchiOBHm_Chr4g0422181 RchiOBHm_Chr5g0036661 RchiOBHm_Chr5g0036731 RchiOBHm_Chr6g0274021 RchiOBHm_Chr7g0190921 RchiOBHm_Chr7g0190931 RchiOBHm_Chr7g0190941 RchiOBHm_Chr7g0190951 RchiOBHm_Chr7g0190961 RchiOBHm_Chr7g0190971 RchiOBHm_Chr7g0191001 RchiOBHm_Chr7g0191011 RchiOBHm_Chr7g0191021 RchiOBHm_Chr7g0192181 RchiOBHm_Chr7g0192191 RchiOBHm_Chr7g0192201 RchiOBHm_Chr7g0192221 RchiOBHm_Chr7g0192231 RchiOBHm_Chr7g0192281 RchiOBHm_Chr7g0197311
rosa_laevigata RLG00000003942 RLG00000004345 RLG00000004379 RLG00000004383 RLG00000004384 RLG00000004385 RLG00000004387 RLG00000004388 RLG00000004389 RLG00000004480 RLG00000004481 RLG00000004482 RLG00000004483 RLG00000004485 RLG00000008342 RLG00000008401 RLG00000013583 RLG00000017044 RLG00000027229 RLG00000028349 RLG00000028350 RLG00000028353 RLG00000028820 RLG00000033707 RLG00000033710
rosa_multiflora Rmu_co8020340.1_g000001 Rmu_co8096640.1_g000001 Rmu_co8214930.1_g000001 Rmu_co8223272.1_g000001 Rmu_co8282535.1_g000001 Rmu_co8343567.1_g000001 Rmu_co8404191.1_g000001 Rmu_co8455157.1_g000001 Rmu_sc0000062.1_g000028 Rmu_sc0000082.1_g000091 Rmu_sc0000509.1_g000017 Rmu_sc0000775.1_g000001 Rmu_sc0000999.1_g000034 Rmu_sc0001559.1_g000004 Rmu_sc0001559.1_g000009 Rmu_sc0002164.1_g000001 Rmu_sc0002164.1_g000005 Rmu_sc0002164.1_g000007 Rmu_sc0002164.1_g000008 Rmu_sc0002164.1_g000009 Rmu_sc0002164.1_g000019 Rmu_sc0002247.1_g000009 Rmu_sc0002373.1_g000002 Rmu_sc0002373.1_g000003 Rmu_sc0002944.1_g000059 Rmu_sc0003930.1_g000004 Rmu_sc0004958.1_g000001 Rmu_sc0005197.1_g000014 Rmu_sc0005898.1_g000008 Rmu_sc0005898.1_g000009 Rmu_sc0005898.1_g000015 Rmu_sc0006059.1_g000004 Rmu_sc0006059.1_g000010 Rmu_sc0006903.1_g000007 Rmu_sc0006903.1_g000008 Rmu_sc0006968.1_g000001 Rmu_sc0011009.1_g000009 Rmu_sc0022852.1_g000002 Rmu_sc0033854.1_g000001 Rmu_ssc0000421.1_g000057 Rmu_ssc0000421.1_g000067 Rmu_ssc0000421.1_g000069 Rmu_ssc0000421.1_g000072 Rmu_ssc0000421.1_g000081 Rmu_ssc0000421.1_g000086
rosa_roxburghii Rroxscaffold_158G00443680 Rroxscaffold_158G00443710 Rroxscaffold_158G00443720 Rroxscaffold_158G00443740 Rroxscaffold_1G00034950 Rroxscaffold_1G00044240 Rroxscaffold_1G00044270 Rroxscaffold_3G00241380 Rroxscaffold_3G00247000 Rroxscaffold_3G00263120 Rroxscaffold_3G00263150 Rroxscaffold_3G00263160 Rroxscaffold_3G00263170 Rroxscaffold_3G00263180 Rroxscaffold_3G00263190 Rroxscaffold_3G00263210 Rroxscaffold_3G00263230 Rroxscaffold_3G00263260 Rroxscaffold_3G00264110 Rroxscaffold_3G00264130 Rroxscaffold_3G00264160 Rroxscaffold_3G00264180 Rroxscaffold_3G00264200 Rroxscaffold_4G00288750 Rroxscaffold_4G00303110 Rroxscaffold_4G00303120 Rroxscaffold_4G00322280 Rroxscaffold_5G00356200 Rroxscaffold_6G00399150 Rroxscaffold_6G00399290 Rroxscaffold_7G00194770
rosa_rugosa Rorug01G0225300 Rorug01G0225400 Rorug01G0225800 Rorug01G0226000 Rorug01G0339400 Rorug01G0451500 Rorug03G0196900 Rorug03G0294900 Rorug04G0107500 Rorug04G0107600 Rorug04G0129700 Rorug04G0178000 Rorug05G0144900.1 Rorug05G0145000 Rorug05G0228000 Rorug05G0228600 Rorug06G0078300 Rorug06G0508000 Rorug06G0508100 Rorug06G0508100 Rorug06G0508400 Rorug06G0513400 Rorug07G0000100 Rorug07G0000200 Rorug07G0000300 Rorug07G0000500 Rorug07G0000800
rosa_samantha Rh1BG060400 Rh1BG210300 Rh1BG210700 Rh1BG210800 Rh1BG309800 Rh1CG223800 Rh1CG224200 Rh1CG325200 Rh1DG237000 Rh1DG237400 Rh1DG341600 Rh2DG365700 Rh3AG212500 Rh3AG248400 Rh3CG239800 Rh3DG239300 Rh4AG169300 Rh4BG166200 Rh4BG240500 Rh4BG240600 Rh4DG163600 Rh5AG249600 Rh5AG249900 Rh5AG250000 Rh5CG283100 Rh5CG283200 Rh5CG283400 Rh5DG259200 Rh5DG259800 Rh6BG197700 Rh6CG197800 Rh6DG189400 Rh7AG114900 Rh7AG115000 Rh7AG115200 Rh7AG115300 Rh7AG115400 Rh7AG115500 Rh7AG123900 Rh7AG124100 Rh7AG124300 Rh7BG117200 Rh7BG117400 Rh7BG118400 Rh7BG125400 Rh7BG125600 Rh7BG125700 Rh7BG125800 Rh7BG125900 Rh7BG126000 Rh7BG126400 Rh7BG126600 Rh7BG126700 Rh7BG166200 Rh7DG118600 Rh7DG118700 Rh7DG118900 Rh7DG119000 Rh7DG119100 Rh7DG127400 Rh7DG127600 Rh7DG127700 Rh7DG127900 Rh7DG128200
rosa_wichuraiana Rw1G013270 Rw1G020790 Rw2G027890 Rw2G028040 Rw3G019240 Rw4G014070 Rw4G020540 Rw5G021320 Rw5G022970 Rw6G016920 Rw7G010020 Rw7G010040 Rw7G010580 Rw7G010590 Rw7G010600 Rw7G010610 Rw7G010620 Rw7G010630 Rw7G010640 Rw7G010690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 303
AatII GACGTC 1 cut(s) 292
AccI GTMKAC 1 cut(s) 286
AccII CGCG 1 cut(s) 196
AclWI GGATC 1 cut(s) 224
AcyI GRCGYC 1 cut(s) 289
AflIII ACRYGT 1 cut(s) 210
AgsI TTSAA 1 cut(s) 280
AjnI CCWGG 1 cut(s) 355
AluBI AGCT 1 cut(s) 392
AluI AGCT 1 cut(s) 392
Alw21I GWGCWC 1 cut(s) 411
Alw26I GTCTC 1 cut(s) 98
Alw44I GTGCAC 1 cut(s) 407
AlwI GGATC 1 cut(s) 224
ApaLI GTGCAC 1 cut(s) 407
ApeKI GCWGC 1 cut(s) 380
Asp700I GAANNNNTTC 2 cut(s) 314, 471
BaeGI GKGCMC 1 cut(s) 411
BbsI GAAGAC 1 cut(s) 66
Bbv12I GWGCWC 1 cut(s) 411
BbvI GCAGC 1 cut(s) 367
BceAI ACGGC 1 cut(s) 518
BciT130I CCWGG 1 cut(s) 357
BclI TGATCA 1 cut(s) 96
BcoDI GTCTC 1 cut(s) 98
BisI GCNGC 1 cut(s) 381
BlsI GCNGC 1 cut(s) 382
Bme1390I CCNGG 1 cut(s) 357
BmrFI CCNGG 1 cut(s) 357
BpiI GAAGAC 1 cut(s) 66
BpuEI CTTGAG 1 cut(s) 106
BsaHI GRCGYC 1 cut(s) 289
BsaXI ACNNNNNCTCC 2 cut(s) 337, 367
Bse1I ACTGG 1 cut(s) 319
Bse3DI GCAATG 1 cut(s) 425
BseBI CCWGG 1 cut(s) 357
BseGI GGATG 2 cut(s) 118, 150
BseMI GCAATG 1 cut(s) 425
BseMII CTCAG 1 cut(s) 375
BseNI ACTGG 1 cut(s) 319
BseRI GAGGAG 1 cut(s) 269
BseSI GKGCMC 1 cut(s) 411
BseXI GCAGC 1 cut(s) 367
Bsh1236I CGCG 1 cut(s) 196
BsiHKAI GWGCWC 1 cut(s) 411
BsmAI GTCTC 1 cut(s) 98
Bsp1286I GDGCHC 1 cut(s) 411
Bsp143I GATC 3 cut(s) 64, 96, 229
BspCNI CTCAG 1 cut(s) 376
BspFNI CGCG 1 cut(s) 196
BspPI GGATC 1 cut(s) 224
BsrDI GCAATG 1 cut(s) 425
BsrI ACTGG 1 cut(s) 319
BssMI GATC 3 cut(s) 64, 96, 229
BssNI GRCGYC 1 cut(s) 289
Bst2UI CCWGG 1 cut(s) 357
Bst4CI ACNGT 1 cut(s) 514
Bst6I CTCTTC 2 cut(s) 114, 220
BstACI GRCGYC 1 cut(s) 289
BstDEI CTNAG 1 cut(s) 384
BstF5I GGATG 2 cut(s) 118, 150
BstFNI CGCG 1 cut(s) 196
BstKTI GATC 3 cut(s) 67, 99, 232
BstMAI GTCTC 1 cut(s) 98
BstMBI GATC 3 cut(s) 64, 96, 229
BstMWI GCNNNNNNNGC 2 cut(s) 377, 389
BstNI CCWGG 1 cut(s) 357
BstSCI CCNGG 1 cut(s) 355
BstSLI GKGCMC 1 cut(s) 411
BstUI CGCG 1 cut(s) 196
BstV1I GCAGC 1 cut(s) 367
BstV2I GAAGAC 1 cut(s) 66
BstX2I RGATCY 1 cut(s) 229
BstYI RGATCY 1 cut(s) 229
BtsCI GGATG 2 cut(s) 118, 150
CviAII CATG 1 cut(s) 460
CviJI RGCY 5 cut(s) 92, 188, 265, 363, 392
CviKI_1 RGCY 5 cut(s) 92, 188, 265, 363, 392
DdeI CTNAG 1 cut(s) 384
DpnI GATC 3 cut(s) 66, 98, 231
DpnII GATC 3 cut(s) 64, 96, 229
Eam1104I CTCTTC 2 cut(s) 114, 220
EarI CTCTTC 2 cut(s) 114, 220
EcoRII CCWGG 1 cut(s) 355
FaeI CATG 1 cut(s) 463
FaiI YATR 6 cut(s) 134, 167, 241, 303, 374, 461
FatI CATG 1 cut(s) 459
FbaI TGATCA 1 cut(s) 96
FblI GTMKAC 1 cut(s) 286
Fnu4HI GCNGC 1 cut(s) 381
FokI GGATG 2 cut(s) 105, 157
Fsp4HI GCNGC 1 cut(s) 381
GluI GCNGC 1 cut(s) 381
Hin1I GRCGYC 1 cut(s) 289
Hin1II CATG 1 cut(s) 463
HincII GTYRAC 2 cut(s) 150, 287
HindII GTYRAC 2 cut(s) 150, 287
HinfI GANTC 4 cut(s) 106, 325, 437, 467
Hpy166II GTNNAC 3 cut(s) 150, 287, 409
Hpy188I TCNGA 2 cut(s) 74, 497
Hpy188III TCNNGA 1 cut(s) 277
Hpy8I GTNNAC 3 cut(s) 150, 287, 409
Hpy99I CGWCG 1 cut(s) 291
HpyCH4III ACNGT 1 cut(s) 514
HpyCH4IV ACGT 2 cut(s) 210, 289
HpyCH4V TGCA 2 cut(s) 13, 409
HpyF10VI GCNNNNNNNGC 2 cut(s) 377, 389
HpyF3I CTNAG 1 cut(s) 384
HpySE526I ACGT 2 cut(s) 210, 289
Hsp92I GRCGYC 1 cut(s) 289
Hsp92II CATG 1 cut(s) 463
Ksp22I TGATCA 1 cut(s) 96
Kzo9I GATC 3 cut(s) 64, 96, 229
LpnPI CCDG 7 cut(s) 279, 328, 332, 342, 369, 434, 444
Lsp1109I GCAGC 1 cut(s) 367
MaeII ACGT 2 cut(s) 210, 289
MaeIII GTNAC 2 cut(s) 38, 173
MalI GATC 3 cut(s) 66, 98, 231
MboI GATC 3 cut(s) 64, 96, 229
MboII GAAGA 4 cut(s) 71, 101, 167, 237
MflI RGATCY 1 cut(s) 229
MhlI GDGCHC 1 cut(s) 411
MluCI AATT 3 cut(s) 8, 219, 484
MlyI GAGTC 1 cut(s) 100
MnlI CCTC 6 cut(s) 13, 81, 132, 135, 247, 339
MroXI GAANNNNTTC 2 cut(s) 314, 471
MseI TTAA 1 cut(s) 53
MslI CAYNNNNRTG 1 cut(s) 74
MspR9I CCNGG 1 cut(s) 357
MvaI CCWGG 1 cut(s) 357
MvnI CGCG 1 cut(s) 196
MwoI GCNNNNNNNGC 2 cut(s) 377, 389
NdeII GATC 3 cut(s) 64, 96, 229
NlaIII CATG 1 cut(s) 463
PdmI GAANNNNTTC 2 cut(s) 314, 471
PfeI GAWTC 3 cut(s) 325, 437, 467
PfoI TCCNGGA 1 cut(s) 355
PkrI GCNGC 1 cut(s) 382
PleI GAGTC 1 cut(s) 100
PpsI GAGTC 1 cut(s) 100
PsiI TTATAA 1 cut(s) 303
Psp6I CCWGG 1 cut(s) 355
PspGI CCWGG 1 cut(s) 355
PsuI RGATCY 1 cut(s) 229
RseI CAYNNNNRTG 1 cut(s) 74
SalI GTCGAC 1 cut(s) 285
SaqAI TTAA 1 cut(s) 53
SatI GCNGC 1 cut(s) 381
Sau3AI GATC 3 cut(s) 64, 96, 229
SchI GAGTC 1 cut(s) 100
ScrFI CCNGG 1 cut(s) 357
SduI GDGCHC 1 cut(s) 411
SetI ASST 6 cut(s) 24, 175, 213, 275, 292, 394
SmiMI CAYNNNNRTG 1 cut(s) 74
SmlI CTYRAG 1 cut(s) 85
SmoI CTYRAG 1 cut(s) 85
Sse9I AATT 3 cut(s) 8, 219, 484
SspI AATATT 1 cut(s) 138
StyD4I CCNGG 1 cut(s) 355
TaaI ACNGT 1 cut(s) 514
TaiI ACGT 2 cut(s) 213, 292
TaqI TCGA 3 cut(s) 261, 286, 417
TasI AATT 3 cut(s) 8, 219, 484
TfiI GAWTC 3 cut(s) 325, 437, 467
Tru1I TTAA 1 cut(s) 53
Tru9I TTAA 1 cut(s) 53
TseI GCWGC 1 cut(s) 380
TspDTI ATGAA 2 cut(s) 92, 221
VneI GTGCAC 1 cut(s) 407
XmiI GTMKAC 1 cut(s) 286
XmnI GAANNNNTTC 2 cut(s) 314, 471
ZraI GACGTC 1 cut(s) 290
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.