Rh7DG127700

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
Physical Location & Seq
Reverse (-)
10757600 .. 10762386
4787 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG127700.1

Sequence Viewer

Length: 1467 bp
ATGGAGCAACCCCCAGCTGTTGCAGCATCGAATCTATTTACATTCGCTTTTCCCTTCGTCTTCTTCACAATCTTCCTCATCAGATGGCTTATTCCCACTACACCGCCAACCCAGAAATGCTTGCCTCCTTCTCCGCCGGGCCTCCCAATCATAGGGAACCTCCACCAGTTGGGCCGCCTCCCTCACCGGTCCTTACAACTTCTATCCCAGCGCCACGGCCCACTGATGCTACTTCACTTGGGGGTCAGACCAGTTCTCGTAGTCTCCTCCGCAGACGACGCTCGTGACATCATGAAAACCCACGATCTCATCTTCTCCAACAGACCCAGATTGACAGTTGCTGACAGACTTCTCTACCAAGGTAAAGATGTAGCTTCTGCTCCGTACGGTGAGCATTGGAGGAATGCAAGAAGCATATGTGTTCTTCAGCTGTTGAGTACCAACAAGGTTCGGTCTTTCCGCGCCGAGAGAGAGGAAGAACTGGAGTTGCTTTTAGAAGAGGTGACGCGGTCGGCTTCGCTGTCATTGCCTGTGAATCTAAGCGAATTGTTTGCTTCGCTTAGTGTTGATGTGATTTGTAGGGTGGCTTTTGGGAGAAAGTATGGTGGAGTGAAGTTTAAGGAGATGCTTGGGGAGTTTATGAGGCTGTTGGGGGGTTTCTATATGAGGGATTTTGTTCCATGGCTTGGTTGGGTTGATCGCATTAATGGGTCAGATGCTAAAATCGAGAGAGTTGCCGAAGTGTTTGATAGATTTCTGGATGATGTAGTGGAAGAGCATATGAGTGTTTTGAAAACGAAAGAAGAGAATGGAGATACGAGTGTTGACGATGAAGGTGGAAAGGATTTTGTGGATGTACTACTTGAAGTTCAGAGCTCTGGCACTGATGGCTCTTCATTTGATAGAGATAGCATTAAAGGTATCATCTTGGATATGTTTTCTGGTGGAACTGATACAACCTACACAGTTCTAGAACCAGTGGTCATGGTTTCATCTCCAGATGCTGCTCAGGAAACCATGAAAACAAATGATCTCATCTTCTCTATGAAGACAAAGATGTGTCTACAGCTCCTTGCGTTTAGTAAGATGCAAGGGAATTTAAGAAGTTACTTAGGGGGATTGTTGGGTGGTGATTGTGTTGAGGATTTTATTCCTCAACTTTCTTGGAGTAGTCACTTTAATGGGTTAGTAGCAAAAGTGGAGAAAATTTCAAAAGGATTGATCAATTTCTGGATATTGTTGTTCGAGCACATGGGGTACTCTTTAGGTCTTGACGTTGTTGAAGGTCAGATAAATGATTTTGTGGACATCCTGCTTGAACACATAACACAGCTTGCTCTTCTATTGCTAAAAACAGCATTACTGCTATCATCTAGGGTATGGTTGCGGGTGGTACTGATACTACCTACACAATTCTGGAGTGGGCTAGGATTAACCCTTAAGGCACCCCAGAGTGATGAAATGTAG

Protein Analysis

488

Amino Acids

54.6

Weight (kDa)

5.4

Isoelectric Point (pI)

39.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 42 - 326 1.9e-37 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000061)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G48270 AT3G48280 AT3G48290 AT3G48290 AT3G48300 AT3G48300 AT3G48310 AT3G48320 AT4G20235 AT4G20235
fragaria_vesca FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g36190 FvH4_3g14160 FvH4_3g14210 FvH4_3g14260 FvH4_3g14260 FvH4_3g21100 FvH4_3g21380 FvH4_4g24460 FvH4_4g24500 FvH4_5g06571 FvH4_5g06571 FvH4_5g06571 FvH4_5g06571 FvH4_5g06572 FvH4_5g06573 FvH4_5g06574 FvH4_5g06575 FvH4_5g06576 FvH4_5g06577 FvH4_5g06577 FvH4_5g07540 FvH4_5g07550 FvH4_5g07560 FvH4_5g07570 FvH4_5g29491 FvH4_5g29492 FvH4_6g23870 FvH4_6g23880 FvH4_6g26870 FvH4_7g11861 FvH4_7g11862 FvH4_7g13050 FvH4_7g13060 FvH4_7g13080 FvH4_7g13080 FvH4_7g22630 FvH4_7g22650 FvH4_7g22651 FvH4_7g23020
malus_domestica MD03G1207400.v1.1 MD03G1214800.v1.1 MD03G1218500.v1.1 MD06G1163100.v1.1 MD06G1163300.v1.1 MD06G1163400.v1.1 MD06G1163500.v1.1 MD06G1163600.v1.1 MD06G1163800.v1.1 MD06G1164000.v1.1 MD06G1164100.v1.1 MD06G1224400.v1.1 MD08G1222800.v1.1 MD08G1222900.v1.1 MD08G1223100.v1.1 MD11G1091500.v1.1 MD11G1091800.v1.1 MD14G1163200.v1.1 MD14G1169000.v1.1 MD15G1207200.v1.1 MD15G1207300.v1.1 MD17G1259400.v1.1
prunus_persica Prupe.4G198100_v2.0.a1 Prupe.4G199100_v2.0.a1 Prupe.4G199400_v2.0.a1 Prupe.4G199800_v2.0.a1 Prupe.4G225200_v2.0.a1 Prupe.4G239100_v2.0.a1 Prupe.5G156600_v2.0.a1 Prupe.5G163500_v2.0.a1 Prupe.7G209500_v2.0.a1 Prupe.I003400_v2.0.a1
pyrus_communis pycom03g16340 pycom06g14600 pycom06g14610 pycom06g14620 pycom06g14630 pycom06g14640 pycom06g14670 pycom06g14690 pycom08g19390 pycom08g19400 pycom08g19410 pycom11g07600 pycom11g07610 pycom11g07620 pycom11g07660 pycom14g13580 pycom14g14080 pycom14g14100 pycom14g14110 pycom15g18380 pycom17g26080
rosa_chinensis RchiOBHm_Chr1g0339441 RchiOBHm_Chr1g0339451 RchiOBHm_Chr1g0352191 RchiOBHm_Chr1g0368221 RchiOBHm_Chr2g0129531 RchiOBHm_Chr2g0129541 RchiOBHm_Chr3g0477631 RchiOBHm_Chr3g0482551 RchiOBHm_Chr3g0482561 RchiOBHm_Chr3g0482571 RchiOBHm_Chr4g0411601 RchiOBHm_Chr4g0422181 RchiOBHm_Chr5g0036661 RchiOBHm_Chr5g0036731 RchiOBHm_Chr6g0274021 RchiOBHm_Chr7g0190921 RchiOBHm_Chr7g0190931 RchiOBHm_Chr7g0190941 RchiOBHm_Chr7g0190951 RchiOBHm_Chr7g0190961 RchiOBHm_Chr7g0190971 RchiOBHm_Chr7g0191001 RchiOBHm_Chr7g0191011 RchiOBHm_Chr7g0191021 RchiOBHm_Chr7g0192181 RchiOBHm_Chr7g0192191 RchiOBHm_Chr7g0192201 RchiOBHm_Chr7g0192221 RchiOBHm_Chr7g0192231 RchiOBHm_Chr7g0192281 RchiOBHm_Chr7g0197311
rosa_laevigata RLG00000003942 RLG00000004345 RLG00000004379 RLG00000004383 RLG00000004384 RLG00000004385 RLG00000004387 RLG00000004388 RLG00000004389 RLG00000004480 RLG00000004481 RLG00000004482 RLG00000004483 RLG00000004485 RLG00000008342 RLG00000008401 RLG00000013583 RLG00000017044 RLG00000027229 RLG00000028349 RLG00000028350 RLG00000028353 RLG00000028820 RLG00000033707 RLG00000033710
rosa_multiflora Rmu_co8020340.1_g000001 Rmu_co8096640.1_g000001 Rmu_co8214930.1_g000001 Rmu_co8223272.1_g000001 Rmu_co8282535.1_g000001 Rmu_co8343567.1_g000001 Rmu_co8404191.1_g000001 Rmu_co8455157.1_g000001 Rmu_sc0000062.1_g000028 Rmu_sc0000082.1_g000091 Rmu_sc0000509.1_g000017 Rmu_sc0000775.1_g000001 Rmu_sc0000999.1_g000034 Rmu_sc0001559.1_g000004 Rmu_sc0001559.1_g000009 Rmu_sc0002164.1_g000001 Rmu_sc0002164.1_g000005 Rmu_sc0002164.1_g000007 Rmu_sc0002164.1_g000008 Rmu_sc0002164.1_g000009 Rmu_sc0002164.1_g000019 Rmu_sc0002247.1_g000009 Rmu_sc0002373.1_g000002 Rmu_sc0002373.1_g000003 Rmu_sc0002944.1_g000059 Rmu_sc0003930.1_g000004 Rmu_sc0004958.1_g000001 Rmu_sc0005197.1_g000014 Rmu_sc0005898.1_g000008 Rmu_sc0005898.1_g000009 Rmu_sc0005898.1_g000015 Rmu_sc0006059.1_g000004 Rmu_sc0006059.1_g000010 Rmu_sc0006903.1_g000007 Rmu_sc0006903.1_g000008 Rmu_sc0006968.1_g000001 Rmu_sc0011009.1_g000009 Rmu_sc0022852.1_g000002 Rmu_sc0033854.1_g000001 Rmu_ssc0000421.1_g000057 Rmu_ssc0000421.1_g000067 Rmu_ssc0000421.1_g000069 Rmu_ssc0000421.1_g000072 Rmu_ssc0000421.1_g000081 Rmu_ssc0000421.1_g000086
rosa_roxburghii Rroxscaffold_158G00443680 Rroxscaffold_158G00443710 Rroxscaffold_158G00443720 Rroxscaffold_158G00443740 Rroxscaffold_1G00034950 Rroxscaffold_1G00044240 Rroxscaffold_1G00044270 Rroxscaffold_3G00241380 Rroxscaffold_3G00247000 Rroxscaffold_3G00263120 Rroxscaffold_3G00263150 Rroxscaffold_3G00263160 Rroxscaffold_3G00263170 Rroxscaffold_3G00263180 Rroxscaffold_3G00263190 Rroxscaffold_3G00263210 Rroxscaffold_3G00263230 Rroxscaffold_3G00263260 Rroxscaffold_3G00264110 Rroxscaffold_3G00264130 Rroxscaffold_3G00264160 Rroxscaffold_3G00264180 Rroxscaffold_3G00264200 Rroxscaffold_4G00288750 Rroxscaffold_4G00303110 Rroxscaffold_4G00303120 Rroxscaffold_4G00322280 Rroxscaffold_5G00356200 Rroxscaffold_6G00399150 Rroxscaffold_6G00399290 Rroxscaffold_7G00194770
rosa_rugosa Rorug01G0225300 Rorug01G0225400 Rorug01G0225800 Rorug01G0226000 Rorug01G0339400 Rorug01G0451500 Rorug03G0196900 Rorug03G0294900 Rorug04G0107500 Rorug04G0107600 Rorug04G0129700 Rorug04G0178000 Rorug05G0144900.1 Rorug05G0145000 Rorug05G0228000 Rorug05G0228600 Rorug06G0078300 Rorug06G0508000 Rorug06G0508100 Rorug06G0508100 Rorug06G0508400 Rorug06G0513400 Rorug07G0000100 Rorug07G0000200 Rorug07G0000300 Rorug07G0000500 Rorug07G0000800
rosa_samantha Rh1BG060400 Rh1BG210300 Rh1BG210700 Rh1BG210800 Rh1BG309800 Rh1CG223800 Rh1CG224200 Rh1CG325200 Rh1DG237000 Rh1DG237400 Rh1DG341600 Rh2DG365700 Rh3AG212500 Rh3AG248400 Rh3CG239800 Rh3DG239300 Rh4AG169300 Rh4BG166200 Rh4BG240500 Rh4BG240600 Rh4DG163600 Rh5AG249600 Rh5AG249900 Rh5AG250000 Rh5CG283100 Rh5CG283200 Rh5CG283400 Rh5DG259200 Rh5DG259800 Rh6BG197700 Rh6CG197800 Rh6DG189400 Rh7AG114900 Rh7AG115000 Rh7AG115200 Rh7AG115300 Rh7AG115400 Rh7AG115500 Rh7AG123900 Rh7AG124100 Rh7AG124300 Rh7BG117200 Rh7BG117400 Rh7BG118400 Rh7BG125400 Rh7BG125600 Rh7BG125700 Rh7BG125800 Rh7BG125900 Rh7BG126000 Rh7BG126400 Rh7BG126600 Rh7BG126700 Rh7BG166200 Rh7DG118600 Rh7DG118700 Rh7DG118900 Rh7DG119000 Rh7DG119100 Rh7DG127400 Rh7DG127600 Rh7DG127700 Rh7DG127900 Rh7DG128200
rosa_wichuraiana Rw1G013270 Rw1G020790 Rw2G027890 Rw2G028040 Rw3G019240 Rw4G014070 Rw4G020540 Rw5G021320 Rw5G022970 Rw6G016920 Rw7G010020 Rw7G010040 Rw7G010580 Rw7G010590 Rw7G010600 Rw7G010610 Rw7G010620 Rw7G010630 Rw7G010640 Rw7G010690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1444
AccB7I CCANNNNNTGG 2 cut(s) 169, 686
AccI GTMKAC 1 cut(s) 1063
AccII CGCG 2 cut(s) 462, 508
AciI CCGC 7 cut(s) 104, 134, 175, 270, 460, 508, 1387
AcsI RAATTY 2 cut(s) 1096, 1206
AcuI CTGAAG 1 cut(s) 410
AfaI GTAC 5 cut(s) 386, 439, 858, 1259, 1395
AfiI CCNNNNNNNGG 3 cut(s) 152, 169, 686
AflII CTTAAG 1 cut(s) 1439
AgeI ACCGGT 1 cut(s) 186
AgsI TTSAA 5 cut(s) 793, 866, 1212, 1283, 1319
AluBI AGCT 6 cut(s) 17, 374, 430, 876, 1069, 1333
AluI AGCT 6 cut(s) 17, 374, 430, 876, 1069, 1333
Alw21I GWGCWC 2 cut(s) 878, 1251
Alw26I GTCTC 1 cut(s) 268
AlwNI CAGNNNCTG 2 cut(s) 341, 1004
AoxI GGCC 3 cut(s) 139, 172, 217
ApeKI GCWGC 2 cut(s) 23, 1004
ApoI RAATTY 2 cut(s) 1096, 1206
AseI ATTAAT 1 cut(s) 705
AsiGI ACCGGT 1 cut(s) 186
AspLEI GCGC 2 cut(s) 213, 464
AspS9I GGNCC 4 cut(s) 139, 172, 189, 218
AsuC2I CCSGG 1 cut(s) 138
AsuHPI GGTGA 4 cut(s) 176, 401, 514, 1142
AvaII GGWCC 1 cut(s) 189
BaeI ACNNNNGTAYC 2 cut(s) 807, 840
BanI GGYRCC 1 cut(s) 1444
BanII GRGCYC 1 cut(s) 878
BauI CACGAG 1 cut(s) 282
BbsI GAAGAC 2 cut(s) 52, 1055
Bbv12I GWGCWC 2 cut(s) 878, 1251
BbvI GCAGC 2 cut(s) 35, 991
BccI CCATC 2 cut(s) 78, 881
BceAI ACGGC 1 cut(s) 232
BcgI CGANNNNNNTGC 4 cut(s) 533, 567, 716, 750
BclI TGATCA 1 cut(s) 1221
BcnI CCSGG 1 cut(s) 138
BcoDI GTCTC 1 cut(s) 268
BfaI CTAG 3 cut(s) 971, 1374, 1427
BfmI CTRYAG 1 cut(s) 1064
BfoI RGCGCY 1 cut(s) 214
BfrI CTTAAG 1 cut(s) 1439
BisI GCNGC 3 cut(s) 24, 175, 1005
BlsI GCNGC 3 cut(s) 25, 176, 1006
Bme1390I CCNGG 1 cut(s) 138
Bme18I GGWCC 1 cut(s) 189
BmgT120I GGNCC 4 cut(s) 139, 172, 189, 218
BmiI GGNNCC 2 cut(s) 158, 1446
BmrFI CCNGG 1 cut(s) 138
BmsI GCATC 6 cut(s) 35, 216, 615, 706, 991, 1077
BpiI GAAGAC 2 cut(s) 52, 1055
BpmI CTGGAG 3 cut(s) 503, 981, 1438
Bpu10I CCTNAGC 1 cut(s) 1008
BpuMI CCSGG 1 cut(s) 138
BsaJI CCNNGG 3 cut(s) 214, 358, 680
BsaWI WCCGGW 1 cut(s) 186
Bsc4I CCNNNNNNNGG 3 cut(s) 152, 169, 686
Bse118I RCCGGY 1 cut(s) 186
Bse1I ACTGG 4 cut(s) 166, 251, 486, 977
Bse3DI GCAATG 1 cut(s) 524
BseDI CCNNGG 3 cut(s) 214, 358, 680
BseGI GGATG 3 cut(s) 766, 859, 1308
BseLI CCNNNNNNNGG 3 cut(s) 152, 169, 686
BseMI GCAATG 1 cut(s) 524
BseMII CTCAG 1 cut(s) 1022
BseNI ACTGG 4 cut(s) 166, 251, 486, 977
BseRI GAGGAG 1 cut(s) 256
BseXI GCAGC 2 cut(s) 35, 991
BseYI CCCAGC 2 cut(s) 13, 207
Bsh1236I CGCG 2 cut(s) 462, 508
Bsh1285I CGRYCG 1 cut(s) 512
BshFI GGCC 3 cut(s) 141, 174, 219
BshNI GGYRCC 1 cut(s) 1444
BshTI ACCGGT 1 cut(s) 186
BsiEI CGRYCG 1 cut(s) 512
BsiHKAI GWGCWC 2 cut(s) 878, 1251
BsiSI CCGG 2 cut(s) 137, 187
BsiWI CGTACG 1 cut(s) 384
BslI CCNNNNNNNGG 3 cut(s) 152, 169, 686
BsmAI GTCTC 1 cut(s) 268
BsmI GAATGC 1 cut(s) 409
BsnI GGCC 3 cut(s) 141, 174, 219
Bsp1286I GDGCHC 2 cut(s) 878, 1251
Bsp143I GATC 4 cut(s) 304, 697, 1030, 1221
Bsp19I CCATGG 1 cut(s) 680
BspACI CCGC 7 cut(s) 104, 134, 175, 270, 460, 508, 1387
BspANI GGCC 3 cut(s) 141, 174, 219
BspCNI CTCAG 1 cut(s) 1021
BspFNI CGCG 2 cut(s) 462, 508
BspHI TCATGA 1 cut(s) 291
BspLI GGNNCC 2 cut(s) 158, 1446
BspQI GCTCTTC 3 cut(s) 768, 898, 1344
BspT107I GGYRCC 1 cut(s) 1444
BspTI CTTAAG 1 cut(s) 1439
BsrDI GCAATG 1 cut(s) 524
BsrFI RCCGGY 1 cut(s) 186
BsrI ACTGG 4 cut(s) 166, 251, 486, 977
BssAI RCCGGY 1 cut(s) 186
BssECI CCNNGG 3 cut(s) 214, 358, 680
BssMI GATC 4 cut(s) 304, 697, 1030, 1221
BssSI CACGAG 1 cut(s) 282
BssT1I CCWWGG 2 cut(s) 358, 680
Bst2BI CACGAG 1 cut(s) 282
Bst4CI ACNGT 3 cut(s) 337, 389, 967
Bst6I CTCTTC 5 cut(s) 492, 768, 798, 898, 1344
BstAFI CTTAAG 1 cut(s) 1439
BstC8I GCNNGC 2 cut(s) 122, 1335
BstDEI CTNAG 4 cut(s) 539, 560, 1008, 1111
BstDSI CCRYGG 2 cut(s) 214, 680
BstF5I GGATG 3 cut(s) 766, 859, 1308
BstFNI CGCG 2 cut(s) 462, 508
BstH2I RGCGCY 1 cut(s) 214
BstHHI GCGC 2 cut(s) 213, 464
BstKTI GATC 4 cut(s) 307, 700, 1033, 1224
BstMAI GTCTC 1 cut(s) 268
BstMBI GATC 4 cut(s) 304, 697, 1030, 1221
BstMCI CGRYCG 1 cut(s) 512
BstMWI GCNNNNNNNGC 4 cut(s) 23, 278, 526, 888
BstSCI CCNGG 1 cut(s) 136
BstSFI CTRYAG 1 cut(s) 1064
BstUI CGCG 2 cut(s) 462, 508
BstV1I GCAGC 2 cut(s) 35, 991
BstV2I GAAGAC 2 cut(s) 52, 1055
BsuRI GGCC 3 cut(s) 141, 174, 219
BtgI CCRYGG 2 cut(s) 214, 680
BtsCI GGATG 3 cut(s) 766, 859, 1308
BtsIMutI CAGTG 3 cut(s) 221, 882, 984
Cac8I GCNNGC 2 cut(s) 122, 1335
CaiI CAGNNNCTG 2 cut(s) 341, 1004
CciI TCATGA 1 cut(s) 291
CfoI GCGC 2 cut(s) 213, 464
Cfr10I RCCGGY 1 cut(s) 186
Cfr13I GGNCC 4 cut(s) 139, 172, 189, 218
CseI GACGC 2 cut(s) 287, 514
Csp6I GTAC 5 cut(s) 385, 438, 857, 1258, 1394
CspAI ACCGGT 1 cut(s) 186
CviAII CATG 5 cut(s) 292, 681, 985, 1018, 1252
CviQI GTAC 5 cut(s) 385, 438, 857, 1258, 1394
DdeI CTNAG 4 cut(s) 539, 560, 1008, 1111
DpnI GATC 4 cut(s) 306, 699, 1032, 1223
DpnII GATC 4 cut(s) 304, 697, 1030, 1221
Eam1104I CTCTTC 5 cut(s) 492, 768, 798, 898, 1344
EarI CTCTTC 5 cut(s) 492, 768, 798, 898, 1344
EciI GGCGGA 1 cut(s) 123
Ecl136II GAGCTC 1 cut(s) 876
Eco130I CCWWGG 2 cut(s) 358, 680
Eco24I GRGCYC 1 cut(s) 878
Eco47I GGWCC 1 cut(s) 189
Eco53kI GAGCTC 1 cut(s) 876
Eco57I CTGAAG 1 cut(s) 410
EcoICRI GAGCTC 1 cut(s) 876
EcoT14I CCWWGG 2 cut(s) 358, 680
EcoT38I GRGCYC 1 cut(s) 878
ErhI CCWWGG 2 cut(s) 358, 680
FaeI CATG 5 cut(s) 295, 684, 988, 1021, 1255
FatI CATG 5 cut(s) 291, 680, 984, 1017, 1251
FauI CCCGC 1 cut(s) 1380
FauNDI CATATG 2 cut(s) 416, 780
FbaI TGATCA 1 cut(s) 1221
FblI GTMKAC 1 cut(s) 1063
Fnu4HI GCNGC 3 cut(s) 24, 175, 1005
FokI GGATG 3 cut(s) 773, 866, 1295
FriOI GRGCYC 1 cut(s) 878
Fsp4HI GCNGC 3 cut(s) 24, 175, 1005
FspBI CTAG 3 cut(s) 971, 1374, 1427
GlaI GCGC 2 cut(s) 212, 463
GluI GCNGC 3 cut(s) 24, 175, 1005
GsaI CCCAGC 2 cut(s) 17, 211
GsuI CTGGAG 3 cut(s) 503, 981, 1438
HaeII RGCGCY 1 cut(s) 214
HaeIII GGCC 3 cut(s) 141, 174, 219
HapII CCGG 2 cut(s) 137, 187
HgaI GACGC 2 cut(s) 287, 514
HhaI GCGC 2 cut(s) 213, 464
Hin1II CATG 5 cut(s) 295, 684, 988, 1021, 1255
Hin6I GCGC 2 cut(s) 211, 462
HinP1I GCGC 2 cut(s) 211, 462
HincII GTYRAC 1 cut(s) 826
HindII GTYRAC 1 cut(s) 826
HinfI GANTC 2 cut(s) 31, 535
HpaII CCGG 2 cut(s) 137, 187
HphI GGTGA 4 cut(s) 176, 401, 514, 1142
Hpy166II GTNNAC 3 cut(s) 826, 1064, 1306
Hpy188I TCNGA 5 cut(s) 83, 248, 715, 873, 1290
Hpy8I GTNNAC 3 cut(s) 826, 1064, 1306
Hpy99I CGWCG 1 cut(s) 281
HpyAV CCTTC 4 cut(s) 64, 138, 827, 1277
HpyCH4III ACNGT 3 cut(s) 337, 389, 967
HpyCH4IV ACGT 1 cut(s) 1275
HpyCH4V TGCA 3 cut(s) 23, 407, 1090
HpyF10VI GCNNNNNNNGC 4 cut(s) 23, 278, 526, 888
HpyF3I CTNAG 4 cut(s) 539, 560, 1008, 1111
HpySE526I ACGT 1 cut(s) 1275
Hsp92II CATG 5 cut(s) 295, 684, 988, 1021, 1255
HspAI GCGC 2 cut(s) 211, 462
Ksp22I TGATCA 1 cut(s) 1221
Kzo9I GATC 4 cut(s) 304, 697, 1030, 1221
LguI GCTCTTC 3 cut(s) 768, 898, 1344
LmnI GCTCC 3 cut(s) 4, 385, 1074
Lsp1109I GCAGC 2 cut(s) 35, 991
LweI GCATC 6 cut(s) 35, 216, 615, 706, 991, 1077
MaeI CTAG 3 cut(s) 971, 1374, 1427
MaeII ACGT 1 cut(s) 1275
MaeIII GTNAC 4 cut(s) 284, 502, 1106, 1172
MalI GATC 4 cut(s) 306, 699, 1032, 1223
MboI GATC 4 cut(s) 304, 697, 1030, 1221
MhlI GDGCHC 2 cut(s) 878, 1251
MluCI AATT 5 cut(s) 545, 1096, 1206, 1225, 1412
MmeI TCCRAC 1 cut(s) 342
MseI TTAA 7 cut(s) 618, 705, 915, 1100, 1179, 1433, 1440
MslI CAYNNNNRTG 2 cut(s) 783, 1179
MspA1I CMGCKG 2 cut(s) 17, 430
MspCI CTTAAG 1 cut(s) 1439
MspI CCGG 2 cut(s) 137, 187
MspR9I CCNGG 1 cut(s) 138
Mva1269I GAATGC 1 cut(s) 409
MvnI CGCG 2 cut(s) 462, 508
MwoI GCNNNNNNNGC 4 cut(s) 23, 278, 526, 888
NciI CCSGG 1 cut(s) 138
NcoI CCATGG 1 cut(s) 680
NdeI CATATG 2 cut(s) 416, 780
NdeII GATC 4 cut(s) 304, 697, 1030, 1221
NlaIII CATG 5 cut(s) 295, 684, 988, 1021, 1255
NlaIV GGNNCC 2 cut(s) 158, 1446
NmeAIII GCCGAG 1 cut(s) 490
NmuCI GTSAC 3 cut(s) 284, 502, 1172
PagI TCATGA 1 cut(s) 291
PciSI GCTCTTC 3 cut(s) 768, 898, 1344
PctI GAATGC 1 cut(s) 409
PfeI GAWTC 2 cut(s) 31, 535
Pfl23II CGTACG 1 cut(s) 384
PflFI GACNNNGTC 1 cut(s) 508
PflMI CCANNNNNTGG 2 cut(s) 169, 686
PinAI ACCGGT 1 cut(s) 186
PkrI GCNGC 3 cut(s) 25, 176, 1006
PshBI ATTAAT 1 cut(s) 705
Psp124BI GAGCTC 1 cut(s) 878
PspFI CCCAGC 2 cut(s) 13, 207
PspLI CGTACG 1 cut(s) 384
PspN4I GGNNCC 2 cut(s) 158, 1446
PspPI GGNCC 4 cut(s) 139, 172, 189, 218
PstNI CAGNNNCTG 2 cut(s) 341, 1004
PsyI GACNNNGTC 1 cut(s) 508
PvuII CAGCTG 2 cut(s) 17, 430
RsaI GTAC 5 cut(s) 386, 439, 858, 1259, 1395
RsaNI GTAC 5 cut(s) 385, 438, 857, 1258, 1394
RseI CAYNNNNRTG 2 cut(s) 783, 1179
SacI GAGCTC 1 cut(s) 878
SapI GCTCTTC 3 cut(s) 768, 898, 1344
SaqAI TTAA 7 cut(s) 618, 705, 915, 1100, 1179, 1433, 1440
SatI GCNGC 3 cut(s) 24, 175, 1005
Sau3AI GATC 4 cut(s) 304, 697, 1030, 1221
Sau96I GGNCC 4 cut(s) 139, 172, 189, 218
ScrFI CCNGG 1 cut(s) 138
SduI GDGCHC 2 cut(s) 878, 1251
SfaNI GCATC 6 cut(s) 35, 216, 615, 706, 991, 1077
SfcI CTRYAG 1 cut(s) 1064
SinI GGWCC 1 cut(s) 189
SmiMI CAYNNNNRTG 2 cut(s) 783, 1179
SmlI CTYRAG 1 cut(s) 1439
SmoI CTYRAG 1 cut(s) 1439
Sse9I AATT 5 cut(s) 545, 1096, 1206, 1225, 1412
SsiI CCGC 7 cut(s) 104, 134, 175, 270, 460, 508, 1387
SspMI CTAG 3 cut(s) 971, 1374, 1427
SstI GAGCTC 1 cut(s) 878
StyD4I CCNGG 1 cut(s) 136
StyI CCWWGG 2 cut(s) 358, 680
TaaI ACNGT 3 cut(s) 337, 389, 967
TaiI ACGT 1 cut(s) 1278
TaqI TCGA 3 cut(s) 29, 726, 1245
TaqII GACCGA 1 cut(s) 441
TasI AATT 5 cut(s) 545, 1096, 1206, 1225, 1412
TatI WGTACW 1 cut(s) 856
TauI GCSGC 1 cut(s) 177
TfiI GAWTC 2 cut(s) 31, 535
Tru1I TTAA 7 cut(s) 618, 705, 915, 1100, 1179, 1433, 1440
Tru9I TTAA 7 cut(s) 618, 705, 915, 1100, 1179, 1433, 1440
TscAI CASTG 3 cut(s) 228, 889, 984
TseFI GTSAC 3 cut(s) 284, 502, 1172
TseI GCWGC 2 cut(s) 23, 1004
Tsp45I GTSAC 3 cut(s) 284, 502, 1172
TspDTI ATGAA 6 cut(s) 308, 846, 885, 981, 1034, 1061
TspGWI ACGGA 1 cut(s) 372
TspRI CASTG 3 cut(s) 228, 889, 984
Tth111I GACNNNGTC 1 cut(s) 508
Van91I CCANNNNNTGG 2 cut(s) 169, 686
Vha464I CTTAAG 1 cut(s) 1439
VpaK11BI GGWCC 1 cut(s) 189
VspI ATTAAT 1 cut(s) 705
XapI RAATTY 2 cut(s) 1096, 1206
XbaI TCTAGA 1 cut(s) 970
XcmI CCANNNNNNNNNTGG 1 cut(s) 687
XmiI GTMKAC 1 cut(s) 1063
XspI CTAG 3 cut(s) 971, 1374, 1427
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.