RLG00000004384

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
Physical Location & Seq
Forward (+)
58904647 .. 58906404
1758 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000004384

Sequence Viewer

Length: 1545 bp
ATGATAGAGCTGACGTCGACCCATAAAATCTCCCTTTTGATGGAATATTATTTCACCCTCACATTAGTACTATGTGTGCCCATTTTCTTCATTCTCTTTCGCAGATGCTCCTCCGTTACTACCAAAAACCCACCACCCTCTCCACCAAAGCTCCCTTTCCTCGGGAACCTTCATCAACTAGACTCACATCCTCATCGCTCACTCCAAGCCTTAGCTCATCGCCATGGCCCCCTCATGCTACTCCATTTCGGAAGTGTCCCAGTCCTTGTTGTCTCCACGGCTGAGGTTGCGCGCGAGGTCTTGAAAACACATGACCTCACAATTGCCAGCAGACCAAAGTCCACCGTCTTTAAGAAGCTTCTCTACAATTACAAAGACTTGGCGTCTGCACCTTATGTGAGAGAAGACGAAGCAAAAATCATGATCAACAGGATAGAACAGTCATGTATATCCTCCTCCTCAAAGTCATCCGTCGTGAATTTAAGGGAGATCTTTGTGATGCTTACTATTGATCTCGCCTGTAGAGTGACTACGGGGAGGAAGTACAATAGCGTCGTTGGGGAAGATGGTGACAGAATATTGTTTAAGGATCTTGTGGGGGAGTTTATTGAGTTACTGGGAGGTATCTATATCGGAGACTATATCCCATGGCTCGCTTGGTTAACTCGTGTCAATGGTTTGGACTCTAAATTAGACAAGGTGGCTAAACAATTTGATGACCTTTTAGATAGAGTGATTCAAGATCATATCGACCAACGTTCAAAGTGTGGAAACATTAACGACAATCTGAATCATACGGATGATCAGGAGGAAAATGGCCAAAATGATTTCGTGGACGTTTTACTTGGGATTCAAGAAGACAACTCATCAATTGGATTACCTATTGATAGAGTCACCGTAAAAGCTCTCCTCATGGACATGTTTTCGGGTGGCACCGATACATCATATACACTCCTAGAGTGGACGATGGCAGAGCTTTTGAGACATCCAAGAGTAATGAAAAAATTGCAAAATGAGGTCAGGGGAATAGCGGGAAACAAATCAGAGATCAACGAGGATGATTTGAATGGTATGAACTACTTGAAGGCTGTGATCAAGGAAACTCTTCGCTTACATCCTCCGTTAACTTTATTATTCAGGATTTCAACTGAAGATATGAAAATAAAGGGTTACAACGTTAAAACCAACACGCAAATTATAGTTAACGCATGGCAGATAGGAAGAGATCCTAAATCATACAACAACCCAGACAAGTATGAACCAGAGAGGTTCTTGAACAGTGATGTAGATTATAAAGGGAATCATTTCGAATTTATTCCATTTGGAGCTGGAAGGAGGAGCTGCCCCGGAATTCAATATGCCGCAATGGTTAATGAGATTGCTTTGGCAAATTTGGTGCACAAGTTCGACTGGTTAGTGCCTGGTGGAGTAGGCGCCCATGATATAGACATGACTGAATCCACCGGCGTCAAAACACAAATGAAGTATCCTCTGAAAGCCGTTGCTATCCCATATTCATATAAAATCAAGACAGAGGAATTGTAG

Protein Analysis

515

Amino Acids

58.16

Weight (kDa)

6.45

Isoelectric Point (pI)

35.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 45 - 124 3e-11 Cytochrome P450
p450 PF00067 133 - 492 1.6e-72 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000061)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G48270 AT3G48280 AT3G48290 AT3G48290 AT3G48300 AT3G48300 AT3G48310 AT3G48320 AT4G20235 AT4G20235
fragaria_vesca FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g36190 FvH4_3g14160 FvH4_3g14210 FvH4_3g14260 FvH4_3g14260 FvH4_3g21100 FvH4_3g21380 FvH4_4g24460 FvH4_4g24500 FvH4_5g06571 FvH4_5g06571 FvH4_5g06571 FvH4_5g06571 FvH4_5g06572 FvH4_5g06573 FvH4_5g06574 FvH4_5g06575 FvH4_5g06576 FvH4_5g06577 FvH4_5g06577 FvH4_5g07540 FvH4_5g07550 FvH4_5g07560 FvH4_5g07570 FvH4_5g29491 FvH4_5g29492 FvH4_6g23870 FvH4_6g23880 FvH4_6g26870 FvH4_7g11861 FvH4_7g11862 FvH4_7g13050 FvH4_7g13060 FvH4_7g13080 FvH4_7g13080 FvH4_7g22630 FvH4_7g22650 FvH4_7g22651 FvH4_7g23020
malus_domestica MD03G1207400.v1.1 MD03G1214800.v1.1 MD03G1218500.v1.1 MD06G1163100.v1.1 MD06G1163300.v1.1 MD06G1163400.v1.1 MD06G1163500.v1.1 MD06G1163600.v1.1 MD06G1163800.v1.1 MD06G1164000.v1.1 MD06G1164100.v1.1 MD06G1224400.v1.1 MD08G1222800.v1.1 MD08G1222900.v1.1 MD08G1223100.v1.1 MD11G1091500.v1.1 MD11G1091800.v1.1 MD14G1163200.v1.1 MD14G1169000.v1.1 MD15G1207200.v1.1 MD15G1207300.v1.1 MD17G1259400.v1.1
prunus_persica Prupe.4G198100_v2.0.a1 Prupe.4G199100_v2.0.a1 Prupe.4G199400_v2.0.a1 Prupe.4G199800_v2.0.a1 Prupe.4G225200_v2.0.a1 Prupe.4G239100_v2.0.a1 Prupe.5G156600_v2.0.a1 Prupe.5G163500_v2.0.a1 Prupe.7G209500_v2.0.a1 Prupe.I003400_v2.0.a1
pyrus_communis pycom03g16340 pycom06g14600 pycom06g14610 pycom06g14620 pycom06g14630 pycom06g14640 pycom06g14670 pycom06g14690 pycom08g19390 pycom08g19400 pycom08g19410 pycom11g07600 pycom11g07610 pycom11g07620 pycom11g07660 pycom14g13580 pycom14g14080 pycom14g14100 pycom14g14110 pycom15g18380 pycom17g26080
rosa_chinensis RchiOBHm_Chr1g0339441 RchiOBHm_Chr1g0339451 RchiOBHm_Chr1g0352191 RchiOBHm_Chr1g0368221 RchiOBHm_Chr2g0129531 RchiOBHm_Chr2g0129541 RchiOBHm_Chr3g0477631 RchiOBHm_Chr3g0482551 RchiOBHm_Chr3g0482561 RchiOBHm_Chr3g0482571 RchiOBHm_Chr4g0411601 RchiOBHm_Chr4g0422181 RchiOBHm_Chr5g0036661 RchiOBHm_Chr5g0036731 RchiOBHm_Chr6g0274021 RchiOBHm_Chr7g0190921 RchiOBHm_Chr7g0190931 RchiOBHm_Chr7g0190941 RchiOBHm_Chr7g0190951 RchiOBHm_Chr7g0190961 RchiOBHm_Chr7g0190971 RchiOBHm_Chr7g0191001 RchiOBHm_Chr7g0191011 RchiOBHm_Chr7g0191021 RchiOBHm_Chr7g0192181 RchiOBHm_Chr7g0192191 RchiOBHm_Chr7g0192201 RchiOBHm_Chr7g0192221 RchiOBHm_Chr7g0192231 RchiOBHm_Chr7g0192281 RchiOBHm_Chr7g0197311
rosa_laevigata RLG00000003942 RLG00000004345 RLG00000004379 RLG00000004383 RLG00000004384 RLG00000004385 RLG00000004387 RLG00000004388 RLG00000004389 RLG00000004480 RLG00000004481 RLG00000004482 RLG00000004483 RLG00000004485 RLG00000008342 RLG00000008401 RLG00000013583 RLG00000017044 RLG00000027229 RLG00000028349 RLG00000028350 RLG00000028353 RLG00000028820 RLG00000033707 RLG00000033710
rosa_multiflora Rmu_co8020340.1_g000001 Rmu_co8096640.1_g000001 Rmu_co8214930.1_g000001 Rmu_co8223272.1_g000001 Rmu_co8282535.1_g000001 Rmu_co8343567.1_g000001 Rmu_co8404191.1_g000001 Rmu_co8455157.1_g000001 Rmu_sc0000062.1_g000028 Rmu_sc0000082.1_g000091 Rmu_sc0000509.1_g000017 Rmu_sc0000775.1_g000001 Rmu_sc0000999.1_g000034 Rmu_sc0001559.1_g000004 Rmu_sc0001559.1_g000009 Rmu_sc0002164.1_g000001 Rmu_sc0002164.1_g000005 Rmu_sc0002164.1_g000007 Rmu_sc0002164.1_g000008 Rmu_sc0002164.1_g000009 Rmu_sc0002164.1_g000019 Rmu_sc0002247.1_g000009 Rmu_sc0002373.1_g000002 Rmu_sc0002373.1_g000003 Rmu_sc0002944.1_g000059 Rmu_sc0003930.1_g000004 Rmu_sc0004958.1_g000001 Rmu_sc0005197.1_g000014 Rmu_sc0005898.1_g000008 Rmu_sc0005898.1_g000009 Rmu_sc0005898.1_g000015 Rmu_sc0006059.1_g000004 Rmu_sc0006059.1_g000010 Rmu_sc0006903.1_g000007 Rmu_sc0006903.1_g000008 Rmu_sc0006968.1_g000001 Rmu_sc0011009.1_g000009 Rmu_sc0022852.1_g000002 Rmu_sc0033854.1_g000001 Rmu_ssc0000421.1_g000057 Rmu_ssc0000421.1_g000067 Rmu_ssc0000421.1_g000069 Rmu_ssc0000421.1_g000072 Rmu_ssc0000421.1_g000081 Rmu_ssc0000421.1_g000086
rosa_roxburghii Rroxscaffold_158G00443680 Rroxscaffold_158G00443710 Rroxscaffold_158G00443720 Rroxscaffold_158G00443740 Rroxscaffold_1G00034950 Rroxscaffold_1G00044240 Rroxscaffold_1G00044270 Rroxscaffold_3G00241380 Rroxscaffold_3G00247000 Rroxscaffold_3G00263120 Rroxscaffold_3G00263150 Rroxscaffold_3G00263160 Rroxscaffold_3G00263170 Rroxscaffold_3G00263180 Rroxscaffold_3G00263190 Rroxscaffold_3G00263210 Rroxscaffold_3G00263230 Rroxscaffold_3G00263260 Rroxscaffold_3G00264110 Rroxscaffold_3G00264130 Rroxscaffold_3G00264160 Rroxscaffold_3G00264180 Rroxscaffold_3G00264200 Rroxscaffold_4G00288750 Rroxscaffold_4G00303110 Rroxscaffold_4G00303120 Rroxscaffold_4G00322280 Rroxscaffold_5G00356200 Rroxscaffold_6G00399150 Rroxscaffold_6G00399290 Rroxscaffold_7G00194770
rosa_rugosa Rorug01G0225300 Rorug01G0225400 Rorug01G0225800 Rorug01G0226000 Rorug01G0339400 Rorug01G0451500 Rorug03G0196900 Rorug03G0294900 Rorug04G0107500 Rorug04G0107600 Rorug04G0129700 Rorug04G0178000 Rorug05G0144900.1 Rorug05G0145000 Rorug05G0228000 Rorug05G0228600 Rorug06G0078300 Rorug06G0508000 Rorug06G0508100 Rorug06G0508100 Rorug06G0508400 Rorug06G0513400 Rorug07G0000100 Rorug07G0000200 Rorug07G0000300 Rorug07G0000500 Rorug07G0000800
rosa_samantha Rh1BG060400 Rh1BG210300 Rh1BG210700 Rh1BG210800 Rh1BG309800 Rh1CG223800 Rh1CG224200 Rh1CG325200 Rh1DG237000 Rh1DG237400 Rh1DG341600 Rh2DG365700 Rh3AG212500 Rh3AG248400 Rh3CG239800 Rh3DG239300 Rh4AG169300 Rh4BG166200 Rh4BG240500 Rh4BG240600 Rh4DG163600 Rh5AG249600 Rh5AG249900 Rh5AG250000 Rh5CG283100 Rh5CG283200 Rh5CG283400 Rh5DG259200 Rh5DG259800 Rh6BG197700 Rh6CG197800 Rh6DG189400 Rh7AG114900 Rh7AG115000 Rh7AG115200 Rh7AG115300 Rh7AG115400 Rh7AG115500 Rh7AG123900 Rh7AG124100 Rh7AG124300 Rh7BG117200 Rh7BG117400 Rh7BG118400 Rh7BG125400 Rh7BG125600 Rh7BG125700 Rh7BG125800 Rh7BG125900 Rh7BG126000 Rh7BG126400 Rh7BG126600 Rh7BG126700 Rh7BG166200 Rh7DG118600 Rh7DG118700 Rh7DG118900 Rh7DG119000 Rh7DG119100 Rh7DG127400 Rh7DG127600 Rh7DG127700 Rh7DG127900 Rh7DG128200
rosa_wichuraiana Rw1G013270 Rw1G020790 Rw2G027890 Rw2G028040 Rw3G019240 Rw4G014070 Rw4G020540 Rw5G021320 Rw5G022970 Rw6G016920 Rw7G010020 Rw7G010040 Rw7G010580 Rw7G010590 Rw7G010600 Rw7G010610 Rw7G010620 Rw7G010630 Rw7G010640 Rw7G010690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1293
AatII GACGTC 1 cut(s) 17
AccB1I GGYRCC 2 cut(s) 932, 1433
AccI GTMKAC 1 cut(s) 17
AccII CGCG 2 cut(s) 292, 294
AciI CCGC 2 cut(s) 1031, 1362
AclI AACGTT 2 cut(s) 757, 1176
AclWI GGATC 2 cut(s) 597, 1220
AcoI YGGCCR 1 cut(s) 817
AcsI RAATTY 4 cut(s) 478, 1310, 1350, 1390
AcuI CTGAAG 1 cut(s) 1170
AcyI GRCGYC 4 cut(s) 14, 383, 1434, 1467
AfaI GTAC 2 cut(s) 69, 545
AfiI CCNNNNNNNGG 2 cut(s) 40, 161
AflIII ACRYGT 1 cut(s) 918
AgsI TTSAA 9 cut(s) 304, 740, 762, 854, 1066, 1084, 1146, 1276, 1355
AhdI GACNNNNNGTC 1 cut(s) 382
AjnI CCWGG 1 cut(s) 1420
AluBI AGCT 8 cut(s) 10, 151, 215, 358, 905, 976, 1328, 1341
AluI AGCT 8 cut(s) 10, 151, 215, 358, 905, 976, 1328, 1341
Alw21I GWGCWC 1 cut(s) 1401
Alw26I GTCTC 3 cut(s) 277, 630, 976
Alw44I GTGCAC 1 cut(s) 1397
AlwI GGATC 2 cut(s) 597, 1220
Ama87I CYCGRG 1 cut(s) 161
AoxI GGCC 2 cut(s) 226, 817
ApaLI GTGCAC 1 cut(s) 1397
ApeKI GCWGC 1 cut(s) 1341
ApoI RAATTY 4 cut(s) 478, 1310, 1350, 1390
Asp700I GAANNNNTTC 3 cut(s) 1104, 1304, 1314
AspLEI GCGC 3 cut(s) 292, 294, 1436
AspS9I GGNCC 1 cut(s) 227
AsuC2I CCSGG 1 cut(s) 1347
AsuHPI GGTGA 3 cut(s) 46, 581, 886
AsuII TTCGAA 1 cut(s) 1308
AvaI CYCGRG 1 cut(s) 161
BaeGI GKGCMC 2 cut(s) 81, 1401
BalI TGGCCA 1 cut(s) 819
BanI GGYRCC 2 cut(s) 932, 1433
BarI GAAGNNNNNNTAC 2 cut(s) 347, 379
BauI CACGAG 1 cut(s) 666
BbsI GAAGAC 2 cut(s) 411, 864
Bbv12I GWGCWC 1 cut(s) 1401
BbvCI CCTCAGC 1 cut(s) 282
BbvI GCAGC 1 cut(s) 1328
BccI CCATC 3 cut(s) 34, 560, 961
BceAI ACGGC 2 cut(s) 294, 1484
BciT130I CCWGG 1 cut(s) 1422
BciVI GTATCC 1 cut(s) 1497
BclI TGATCA 3 cut(s) 423, 802, 1092
BcnI CCSGG 1 cut(s) 1347
BcoDI GTCTC 3 cut(s) 277, 630, 976
BfaI CTAG 2 cut(s) 179, 956
BfmI CTRYAG 1 cut(s) 520
BfoI RGCGCY 1 cut(s) 1437
BfuI GTATCC 1 cut(s) 1497
BglII AGATCT 1 cut(s) 489
BisI GCNGC 2 cut(s) 1342, 1362
BlsI GCNGC 2 cut(s) 1343, 1363
BmcAI AGTACT 1 cut(s) 69
Bme1390I CCNGG 2 cut(s) 1347, 1422
BmeRI GACNNNNNGTC 1 cut(s) 382
BmeT110I CYCGRG 1 cut(s) 161
BmgT120I GGNCC 1 cut(s) 227
BmiI GGNNCC 4 cut(s) 167, 229, 934, 1435
BmrFI CCNGG 2 cut(s) 1347, 1422
BmrI ACTGGG 2 cut(s) 254, 626
BmsI GCATC 2 cut(s) 95, 489
BmuI ACTGGG 2 cut(s) 254, 626
BoxI GACNNNNGTC 1 cut(s) 337
BpiI GAAGAC 2 cut(s) 411, 864
Bpu10I CCTNAGC 2 cut(s) 211, 282
Bpu14I TTCGAA 1 cut(s) 1308
BpuMI CCSGG 1 cut(s) 1347
BsaHI GRCGYC 4 cut(s) 14, 383, 1434, 1467
BsaJI CCNNGG 5 cut(s) 160, 223, 276, 647, 1345
BsaXI ACNNNNNCTCC 2 cut(s) 135, 165
Bsc4I CCNNNNNNNGG 2 cut(s) 40, 161
Bse118I RCCGGY 1 cut(s) 1463
Bse1I ACTGG 3 cut(s) 260, 621, 1415
Bse3DI GCAATG 1 cut(s) 1371
BseBI CCWGG 1 cut(s) 1422
BseDI CCNNGG 5 cut(s) 160, 223, 276, 647, 1345
BseGI GGATG 6 cut(s) 187, 467, 805, 985, 1063, 1114
BseLI CCNNNNNNNGG 2 cut(s) 40, 161
BseMI GCAATG 1 cut(s) 1371
BseMII CTCAG 1 cut(s) 273
BseNI ACTGG 3 cut(s) 260, 621, 1415
BsePI GCGCGC 1 cut(s) 290
BseRI GAGGAG 5 cut(s) 100, 445, 448, 899, 1351
BseSI GKGCMC 2 cut(s) 81, 1401
BseXI GCAGC 1 cut(s) 1328
BsgI GTGCAG 1 cut(s) 372
Bsh1236I CGCG 2 cut(s) 292, 294
BshFI GGCC 2 cut(s) 228, 819
BshNI GGYRCC 2 cut(s) 932, 1433
BsiHKAI GWGCWC 1 cut(s) 1401
BsiHKCI CYCGRG 1 cut(s) 161
BsiSI CCGG 2 cut(s) 1347, 1464
BslFI GGGAC 1 cut(s) 242
BslI CCNNNNNNNGG 2 cut(s) 40, 161
BsmAI GTCTC 3 cut(s) 277, 630, 976
BsmFI GGGAC 1 cut(s) 242
BsnI GGCC 2 cut(s) 228, 819
BsoBI CYCGRG 1 cut(s) 161
Bsp119I TTCGAA 1 cut(s) 1308
Bsp1286I GDGCHC 2 cut(s) 81, 1401
Bsp143I GATC 9 cut(s) 423, 489, 511, 589, 742, 802, 1047, 1092, 1225
Bsp19I CCATGG 2 cut(s) 223, 647
BspACI CCGC 2 cut(s) 1031, 1362
BspANI GGCC 2 cut(s) 228, 819
BspCNI CTCAG 1 cut(s) 274
BspFNI CGCG 2 cut(s) 292, 294
BspHI TCATGA 1 cut(s) 420
BspLI GGNNCC 4 cut(s) 167, 229, 934, 1435
BspPI GGATC 2 cut(s) 597, 1220
BspT104I TTCGAA 1 cut(s) 1308
BspT107I GGYRCC 2 cut(s) 932, 1433
BsrDI GCAATG 1 cut(s) 1371
BsrFI RCCGGY 1 cut(s) 1463
BsrI ACTGG 3 cut(s) 260, 621, 1415
BssAI RCCGGY 1 cut(s) 1463
BssECI CCNNGG 5 cut(s) 160, 223, 276, 647, 1345
BssHII GCGCGC 1 cut(s) 290
BssMI GATC 9 cut(s) 423, 489, 511, 589, 742, 802, 1047, 1092, 1225
BssNI GRCGYC 4 cut(s) 14, 383, 1434, 1467
BssSI CACGAG 1 cut(s) 666
BssT1I CCWWGG 2 cut(s) 223, 647
Bst2BI CACGAG 1 cut(s) 666
Bst2UI CCWGG 1 cut(s) 1422
Bst4CI ACNGT 4 cut(s) 346, 441, 898, 1280
Bst6I CTCTTC 2 cut(s) 1110, 1216
BstACI GRCGYC 4 cut(s) 14, 383, 1434, 1467
BstBI TTCGAA 1 cut(s) 1308
BstC8I GCNNGC 3 cut(s) 292, 328, 654
BstDEI CTNAG 2 cut(s) 211, 282
BstDSI CCRYGG 3 cut(s) 223, 276, 647
BstF5I GGATG 6 cut(s) 187, 467, 805, 985, 1063, 1114
BstFNI CGCG 2 cut(s) 292, 294
BstH2I RGCGCY 1 cut(s) 1437
BstHHI GCGC 3 cut(s) 292, 294, 1436
BstKTI GATC 9 cut(s) 426, 492, 514, 592, 745, 805, 1050, 1095, 1228
BstMAI GTCTC 3 cut(s) 277, 630, 976
BstMBI GATC 9 cut(s) 423, 489, 511, 589, 742, 802, 1047, 1092, 1225
BstMWI GCNNNNNNNGC 1 cut(s) 287
BstNI CCWGG 1 cut(s) 1422
BstNSI RCATGY 1 cut(s) 922
BstPAI GACNNNNGTC 1 cut(s) 337
BstSCI CCNGG 2 cut(s) 1345, 1420
BstSFI CTRYAG 1 cut(s) 520
BstSLI GKGCMC 2 cut(s) 81, 1401
BstUI CGCG 2 cut(s) 292, 294
BstV1I GCAGC 1 cut(s) 1328
BstV2I GAAGAC 2 cut(s) 411, 864
BstX2I RGATCY 3 cut(s) 489, 589, 1225
BstYI RGATCY 3 cut(s) 489, 589, 1225
BsuI GTATCC 1 cut(s) 1497
BsuRI GGCC 2 cut(s) 228, 819
BtgI CCRYGG 3 cut(s) 223, 276, 647
BtgZI GCGATG 2 cut(s) 179, 203
BtsCI GGATG 6 cut(s) 187, 467, 805, 985, 1063, 1114
BtsIMutI CAGTG 1 cut(s) 1285
Cac8I GCNNGC 3 cut(s) 292, 328, 654
CciI TCATGA 1 cut(s) 420
CfoI GCGC 3 cut(s) 292, 294, 1436
Cfr10I RCCGGY 1 cut(s) 1463
Cfr13I GGNCC 1 cut(s) 227
CseI GACGC 3 cut(s) 372, 541, 1456
Csp6I GTAC 2 cut(s) 68, 544
CviQI GTAC 2 cut(s) 68, 544
DdeI CTNAG 2 cut(s) 211, 282
DinI GGCGCC 1 cut(s) 1435
DpnI GATC 9 cut(s) 425, 491, 513, 591, 744, 804, 1049, 1094, 1227
DpnII GATC 9 cut(s) 423, 489, 511, 589, 742, 802, 1047, 1092, 1225
DriI GACNNNNNGTC 1 cut(s) 382
EaeI YGGCCR 1 cut(s) 817
Eam1104I CTCTTC 2 cut(s) 1110, 1216
Eam1105I GACNNNNNGTC 1 cut(s) 382
EarI CTCTTC 2 cut(s) 1110, 1216
Eco130I CCWWGG 2 cut(s) 223, 647
Eco57I CTGAAG 1 cut(s) 1170
Eco88I CYCGRG 1 cut(s) 161
EcoRI GAATTC 1 cut(s) 1350
EcoRII CCWGG 1 cut(s) 1420
EcoT14I CCWWGG 2 cut(s) 223, 647
EgeI GGCGCC 1 cut(s) 1435
EheI GGCGCC 1 cut(s) 1435
ErhI CCWWGG 2 cut(s) 223, 647
FaqI GGGAC 1 cut(s) 242
FauI CCCGC 1 cut(s) 1024
FbaI TGATCA 3 cut(s) 423, 802, 1092
FblI GTMKAC 1 cut(s) 17
Fnu4HI GCNGC 2 cut(s) 1342, 1362
FokI GGATG 6 cut(s) 174, 454, 812, 972, 1070, 1101
Fsp4HI GCNGC 2 cut(s) 1342, 1362
FspBI CTAG 2 cut(s) 179, 956
GlaI GCGC 3 cut(s) 291, 293, 1435
GluI GCNGC 2 cut(s) 1342, 1362
HaeII RGCGCY 1 cut(s) 1437
HaeIII GGCC 2 cut(s) 228, 819
HapII CCGG 2 cut(s) 1347, 1464
HgaI GACGC 3 cut(s) 372, 541, 1456
HhaI GCGC 3 cut(s) 292, 294, 1436
Hin1I GRCGYC 4 cut(s) 14, 383, 1434, 1467
Hin6I GCGC 3 cut(s) 290, 292, 1434
HinP1I GCGC 3 cut(s) 290, 292, 1434
HincII GTYRAC 4 cut(s) 18, 663, 1125, 1204
HindII GTYRAC 4 cut(s) 18, 663, 1125, 1204
HindIII AAGCTT 1 cut(s) 356
HinfI GANTC 8 cut(s) 182, 683, 736, 790, 850, 891, 1300, 1457
HpaI GTTAAC 3 cut(s) 663, 1125, 1204
HpaII CCGG 2 cut(s) 1347, 1464
HphI GGTGA 3 cut(s) 46, 581, 886
Hpy166II GTNNAC 8 cut(s) 18, 342, 663, 835, 963, 1125, 1204, 1399
Hpy188I TCNGA 5 cut(s) 251, 635, 789, 1045, 1494
Hpy8I GTNNAC 8 cut(s) 18, 342, 663, 835, 963, 1125, 1204, 1399
Hpy99I CGWCG 3 cut(s) 19, 476, 557
HpyAV CCTTC 3 cut(s) 179, 1078, 1326
HpyCH4III ACNGT 4 cut(s) 346, 441, 898, 1280
HpyCH4IV ACGT 4 cut(s) 14, 757, 837, 1176
HpyCH4V TGCA 3 cut(s) 389, 1009, 1399
HpyF10VI GCNNNNNNNGC 1 cut(s) 287
HpyF3I CTNAG 2 cut(s) 211, 282
HpySE526I ACGT 4 cut(s) 14, 757, 837, 1176
Hsp92I GRCGYC 4 cut(s) 14, 383, 1434, 1467
HspAI GCGC 3 cut(s) 290, 292, 1434
KasI GGCGCC 1 cut(s) 1433
Ksp22I TGATCA 3 cut(s) 423, 802, 1092
KspAI GTTAAC 3 cut(s) 663, 1125, 1204
Kzo9I GATC 9 cut(s) 423, 489, 511, 589, 742, 802, 1047, 1092, 1225
LmnI GCTCC 4 cut(s) 113, 156, 1325, 1338
Lsp1109I GCAGC 1 cut(s) 1328
LweI GCATC 2 cut(s) 95, 489
MaeI CTAG 2 cut(s) 179, 956
MaeII ACGT 4 cut(s) 14, 757, 837, 1176
MaeIII GTNAC 6 cut(s) 115, 526, 569, 612, 892, 1169
MalI GATC 9 cut(s) 425, 491, 513, 591, 744, 804, 1049, 1094, 1227
MboI GATC 9 cut(s) 423, 489, 511, 589, 742, 802, 1047, 1092, 1225
MboII GAAGA 7 cut(s) 79, 416, 575, 869, 1097, 1163, 1233
MfeI CAATTG 2 cut(s) 321, 870
MflI RGATCY 3 cut(s) 489, 589, 1225
MhlI GDGCHC 2 cut(s) 81, 1401
MlsI TGGCCA 1 cut(s) 819
MluNI TGGCCA 1 cut(s) 819
Mly113I GGCGCC 1 cut(s) 1434
MlyI GAGTC 3 cut(s) 176, 677, 900
Mox20I TGGCCA 1 cut(s) 819
MroXI GAANNNNTTC 3 cut(s) 1104, 1304, 1314
MscI TGGCCA 1 cut(s) 819
MseI TTAA 9 cut(s) 351, 482, 585, 662, 777, 1124, 1179, 1203, 1371
MslI CAYNNNNRTG 3 cut(s) 222, 798, 917
Msp20I TGGCCA 1 cut(s) 819
MspI CCGG 2 cut(s) 1347, 1464
MspR9I CCNGG 2 cut(s) 1347, 1422
MunI CAATTG 2 cut(s) 321, 870
MvaI CCWGG 1 cut(s) 1422
MvnI CGCG 2 cut(s) 292, 294
MwoI GCNNNNNNNGC 1 cut(s) 287
NarI GGCGCC 1 cut(s) 1434
NciI CCSGG 1 cut(s) 1347
NcoI CCATGG 2 cut(s) 223, 647
NdeII GATC 9 cut(s) 423, 489, 511, 589, 742, 802, 1047, 1092, 1225
NlaIV GGNNCC 4 cut(s) 167, 229, 934, 1435
NmuCI GTSAC 3 cut(s) 526, 569, 892
NspI RCATGY 1 cut(s) 922
NspV TTCGAA 1 cut(s) 1308
PagI TCATGA 1 cut(s) 420
PauI GCGCGC 1 cut(s) 290
PciI ACATGT 1 cut(s) 918
PdmI GAANNNNTTC 3 cut(s) 1104, 1304, 1314
PfeI GAWTC 5 cut(s) 736, 790, 850, 1300, 1457
PkrI GCNGC 2 cut(s) 1343, 1363
PleI GAGTC 3 cut(s) 176, 677, 899
PluTI GGCGCC 1 cut(s) 1437
PpsI GAGTC 3 cut(s) 176, 677, 899
PscI ACATGT 1 cut(s) 918
PshAI GACNNNNGTC 1 cut(s) 337
PsiI TTATAA 1 cut(s) 1293
Psp1406I AACGTT 2 cut(s) 757, 1176
Psp6I CCWGG 1 cut(s) 1420
PspGI CCWGG 1 cut(s) 1420
PspN4I GGNNCC 4 cut(s) 167, 229, 934, 1435
PspPI GGNCC 1 cut(s) 227
PsuI RGATCY 3 cut(s) 489, 589, 1225
PteI GCGCGC 1 cut(s) 290
RsaI GTAC 2 cut(s) 69, 545
RsaNI GTAC 2 cut(s) 68, 544
RseI CAYNNNNRTG 3 cut(s) 222, 798, 917
SalI GTCGAC 1 cut(s) 16
SaqAI TTAA 9 cut(s) 351, 482, 585, 662, 777, 1124, 1179, 1203, 1371
SatI GCNGC 2 cut(s) 1342, 1362
Sau3AI GATC 9 cut(s) 423, 489, 511, 589, 742, 802, 1047, 1092, 1225
Sau96I GGNCC 1 cut(s) 227
ScaI AGTACT 1 cut(s) 69
SchI GAGTC 3 cut(s) 176, 677, 900
ScrFI CCNGG 2 cut(s) 1347, 1422
SduI GDGCHC 2 cut(s) 81, 1401
SfaNI GCATC 2 cut(s) 95, 489
SfcI CTRYAG 1 cut(s) 520
SfoI GGCGCC 1 cut(s) 1435
SfuI TTCGAA 1 cut(s) 1308
SgrAI CRCCGGYG 1 cut(s) 1463
SmiMI CAYNNNNRTG 3 cut(s) 222, 798, 917
SsiI CCGC 2 cut(s) 1031, 1362
SspDI GGCGCC 1 cut(s) 1433
SspI AATATT 2 cut(s) 47, 579
SspMI CTAG 2 cut(s) 179, 956
StyD4I CCNGG 2 cut(s) 1345, 1420
StyI CCWWGG 2 cut(s) 223, 647
TaaI ACNGT 4 cut(s) 346, 441, 898, 1280
TaiI ACGT 4 cut(s) 17, 760, 840, 1179
TaqI TCGA 4 cut(s) 17, 750, 1308, 1407
TatI WGTACW 2 cut(s) 67, 543
TauI GCSGC 1 cut(s) 1364
TfiI GAWTC 5 cut(s) 736, 790, 850, 1300, 1457
Tru1I TTAA 9 cut(s) 351, 482, 585, 662, 777, 1124, 1179, 1203, 1371
Tru9I TTAA 9 cut(s) 351, 482, 585, 662, 777, 1124, 1179, 1203, 1371
TscAI CASTG 1 cut(s) 1285
TseFI GTSAC 3 cut(s) 526, 569, 892
TseI GCWGC 1 cut(s) 1341
Tsp45I GTSAC 3 cut(s) 526, 569, 892
TspDTI ATGAA 8 cut(s) 79, 161, 1013, 1088, 1172, 1272, 1496, 1506
TspGWI ACGGA 4 cut(s) 103, 460, 812, 1110
TspRI CASTG 1 cut(s) 1285
VneI GTGCAC 1 cut(s) 1397
XapI RAATTY 4 cut(s) 478, 1310, 1350, 1390
XceI RCATGY 1 cut(s) 922
XcmI CCANNNNNNNNNTGG 1 cut(s) 654
XmiI GTMKAC 1 cut(s) 17
XmnI GAANNNNTTC 3 cut(s) 1104, 1304, 1314
XspI CTAG 2 cut(s) 179, 956
ZraI GACGTC 1 cut(s) 15
ZrmI AGTACT 1 cut(s) 69
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.