Rroxscaffold_3G00263190

Cytochrome p450

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0000061
Physical Location & Seq
Forward (+)
57123347 .. 57126319
2973 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00263190.1

Sequence Viewer

Length: 1446 bp
ATGCTGGAACTGAGTGAAACCTTGTCAGTAGTACTGCTTCTAGCCATTACTCTCATCTTCATATACAAATGGTTCTCCACTAGTACAAAAAACTCGCCACCTTCTCCACCAAAACTCCCTATCCTCGGAAACCTTCACCAACTAGGGTTACACCCTCATCGCTCGCTTCGAGCCTTAGCTCAGATCCATGGCCCCTTCATGCTCCTCCACTTTGGAAGCGTCCCCGTCCTTATTGTCTCCTCGGCTGAGGGAGCCCGCGAGATCATGAAAACCCATGACCTCACTTTCTCCAACAGACCCAAGACGGTCGTCTTTGAGAAGCTGCTCTACAATTTCAGAGACGTAGCGTCAGCGCCTTATGGTGAGTACTGGAGACAGATGAAGAGTATATGTGTTTTGAATCTTCTGAGCAACAAAAGGGTTCGCTCTTTTCGCTCTGTTAGAGAAGAGGAAACAAAATCGATGATCGACAAGATAAAGGAAGCATCATCAACATCATTGTACTGGTGGGGAAGGTCTGAGAGAGCTTTTGGGGAGTTTCAGGAATTATTGGGACGCATCAACGTTGGGGATTTAATCCCATGCCTTGCTTGGCTGAACCGTGAGAATGCTTTGGAGGCTAAATTGGACAAGGTGGCTACACGGTTTGATGAGTTTTTGGAGAGAGTGATTCAAGAGCATGCAGATAGTTCCGAGAGTGGAAATAATGATGGCCATGCTCATATTGAGAATGAGAACCAAAAGGATTTTGTGGACGTTTTACTGGAAATTCAGAAAGGAAACTCACTTGGCTTTCCCCTCGAAAGAGTTAGCATAAAGGCACTTATCTTGGATATGTTTGCTGCCGGAACTGATACCACATATTCATTCCTTGAATGGGCAATGAGTGAGCTTTTAAGGCATCCGATGGTCATGAACAAACTGCAGAAAGAGATTCGAGGAATAGTCAGAGACAAGAAAGACATAACGGAGGATGATTTGACTGGACTGCACTATTTAAAGGCAGTGATTAAGGAGACTTTTCGCTTGCACCCTCCAGTTCCATTACTAGTGCCTAGGTTATCAACCCACGAAGTGAAAATAAATGGTTATAGTATTAAAGCCAACACACAAGTTCTAGTGAATGCATGGCACATTGGAAGAGATCCCGAGTCATACAGCAATCCAGAGGAGTTTGAGCCAGAAAGGTTCTTGATTCACAGCGATATAGATTACAAAGGAAATGACTTCCAACTTATTCCATTTGGAGCTGGTAGAAGGATCTGCCCAGGTATTCAATTTGCCACTGCTGTTAATGAGATTGCCTTGGCAAACATATTGCACAAGTTCAATTGGGAATTGCCTAATGGAGCAAATGGCGAAGATTTGGACATGACGGAATCTACTGGTATAACCATACATAGGAAATATCCTCTTAAAGTCGTTGCTGTTCCATATTTTCATTGA

Protein Analysis

481

Amino Acids

54.81

Weight (kDa)

6.43

Isoelectric Point (pI)

36.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 33 - 166 1.5e-19 Cytochrome P450
p450 PF00067 187 - 467 7.2e-74 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000061)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G48270 AT3G48280 AT3G48290 AT3G48290 AT3G48300 AT3G48300 AT3G48310 AT3G48320 AT4G20235 AT4G20235
fragaria_vesca FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g36190 FvH4_3g14160 FvH4_3g14210 FvH4_3g14260 FvH4_3g14260 FvH4_3g21100 FvH4_3g21380 FvH4_4g24460 FvH4_4g24500 FvH4_5g06571 FvH4_5g06571 FvH4_5g06571 FvH4_5g06571 FvH4_5g06572 FvH4_5g06573 FvH4_5g06574 FvH4_5g06575 FvH4_5g06576 FvH4_5g06577 FvH4_5g06577 FvH4_5g07540 FvH4_5g07550 FvH4_5g07560 FvH4_5g07570 FvH4_5g29491 FvH4_5g29492 FvH4_6g23870 FvH4_6g23880 FvH4_6g26870 FvH4_7g11861 FvH4_7g11862 FvH4_7g13050 FvH4_7g13060 FvH4_7g13080 FvH4_7g13080 FvH4_7g22630 FvH4_7g22650 FvH4_7g22651 FvH4_7g23020
malus_domestica MD03G1207400.v1.1 MD03G1214800.v1.1 MD03G1218500.v1.1 MD06G1163100.v1.1 MD06G1163300.v1.1 MD06G1163400.v1.1 MD06G1163500.v1.1 MD06G1163600.v1.1 MD06G1163800.v1.1 MD06G1164000.v1.1 MD06G1164100.v1.1 MD06G1224400.v1.1 MD08G1222800.v1.1 MD08G1222900.v1.1 MD08G1223100.v1.1 MD11G1091500.v1.1 MD11G1091800.v1.1 MD14G1163200.v1.1 MD14G1169000.v1.1 MD15G1207200.v1.1 MD15G1207300.v1.1 MD17G1259400.v1.1
prunus_persica Prupe.4G198100_v2.0.a1 Prupe.4G199100_v2.0.a1 Prupe.4G199400_v2.0.a1 Prupe.4G199800_v2.0.a1 Prupe.4G225200_v2.0.a1 Prupe.4G239100_v2.0.a1 Prupe.5G156600_v2.0.a1 Prupe.5G163500_v2.0.a1 Prupe.7G209500_v2.0.a1 Prupe.I003400_v2.0.a1
pyrus_communis pycom03g16340 pycom06g14600 pycom06g14610 pycom06g14620 pycom06g14630 pycom06g14640 pycom06g14670 pycom06g14690 pycom08g19390 pycom08g19400 pycom08g19410 pycom11g07600 pycom11g07610 pycom11g07620 pycom11g07660 pycom14g13580 pycom14g14080 pycom14g14100 pycom14g14110 pycom15g18380 pycom17g26080
rosa_chinensis RchiOBHm_Chr1g0339441 RchiOBHm_Chr1g0339451 RchiOBHm_Chr1g0352191 RchiOBHm_Chr1g0368221 RchiOBHm_Chr2g0129531 RchiOBHm_Chr2g0129541 RchiOBHm_Chr3g0477631 RchiOBHm_Chr3g0482551 RchiOBHm_Chr3g0482561 RchiOBHm_Chr3g0482571 RchiOBHm_Chr4g0411601 RchiOBHm_Chr4g0422181 RchiOBHm_Chr5g0036661 RchiOBHm_Chr5g0036731 RchiOBHm_Chr6g0274021 RchiOBHm_Chr7g0190921 RchiOBHm_Chr7g0190931 RchiOBHm_Chr7g0190941 RchiOBHm_Chr7g0190951 RchiOBHm_Chr7g0190961 RchiOBHm_Chr7g0190971 RchiOBHm_Chr7g0191001 RchiOBHm_Chr7g0191011 RchiOBHm_Chr7g0191021 RchiOBHm_Chr7g0192181 RchiOBHm_Chr7g0192191 RchiOBHm_Chr7g0192201 RchiOBHm_Chr7g0192221 RchiOBHm_Chr7g0192231 RchiOBHm_Chr7g0192281 RchiOBHm_Chr7g0197311
rosa_laevigata RLG00000003942 RLG00000004345 RLG00000004379 RLG00000004383 RLG00000004384 RLG00000004385 RLG00000004387 RLG00000004388 RLG00000004389 RLG00000004480 RLG00000004481 RLG00000004482 RLG00000004483 RLG00000004485 RLG00000008342 RLG00000008401 RLG00000013583 RLG00000017044 RLG00000027229 RLG00000028349 RLG00000028350 RLG00000028353 RLG00000028820 RLG00000033707 RLG00000033710
rosa_multiflora Rmu_co8020340.1_g000001 Rmu_co8096640.1_g000001 Rmu_co8214930.1_g000001 Rmu_co8223272.1_g000001 Rmu_co8282535.1_g000001 Rmu_co8343567.1_g000001 Rmu_co8404191.1_g000001 Rmu_co8455157.1_g000001 Rmu_sc0000062.1_g000028 Rmu_sc0000082.1_g000091 Rmu_sc0000509.1_g000017 Rmu_sc0000775.1_g000001 Rmu_sc0000999.1_g000034 Rmu_sc0001559.1_g000004 Rmu_sc0001559.1_g000009 Rmu_sc0002164.1_g000001 Rmu_sc0002164.1_g000005 Rmu_sc0002164.1_g000007 Rmu_sc0002164.1_g000008 Rmu_sc0002164.1_g000009 Rmu_sc0002164.1_g000019 Rmu_sc0002247.1_g000009 Rmu_sc0002373.1_g000002 Rmu_sc0002373.1_g000003 Rmu_sc0002944.1_g000059 Rmu_sc0003930.1_g000004 Rmu_sc0004958.1_g000001 Rmu_sc0005197.1_g000014 Rmu_sc0005898.1_g000008 Rmu_sc0005898.1_g000009 Rmu_sc0005898.1_g000015 Rmu_sc0006059.1_g000004 Rmu_sc0006059.1_g000010 Rmu_sc0006903.1_g000007 Rmu_sc0006903.1_g000008 Rmu_sc0006968.1_g000001 Rmu_sc0011009.1_g000009 Rmu_sc0022852.1_g000002 Rmu_sc0033854.1_g000001 Rmu_ssc0000421.1_g000057 Rmu_ssc0000421.1_g000067 Rmu_ssc0000421.1_g000069 Rmu_ssc0000421.1_g000072 Rmu_ssc0000421.1_g000081 Rmu_ssc0000421.1_g000086
rosa_roxburghii Rroxscaffold_158G00443680 Rroxscaffold_158G00443710 Rroxscaffold_158G00443720 Rroxscaffold_158G00443740 Rroxscaffold_1G00034950 Rroxscaffold_1G00044240 Rroxscaffold_1G00044270 Rroxscaffold_3G00241380 Rroxscaffold_3G00247000 Rroxscaffold_3G00263120 Rroxscaffold_3G00263150 Rroxscaffold_3G00263160 Rroxscaffold_3G00263170 Rroxscaffold_3G00263180 Rroxscaffold_3G00263190 Rroxscaffold_3G00263210 Rroxscaffold_3G00263230 Rroxscaffold_3G00263260 Rroxscaffold_3G00264110 Rroxscaffold_3G00264130 Rroxscaffold_3G00264160 Rroxscaffold_3G00264180 Rroxscaffold_3G00264200 Rroxscaffold_4G00288750 Rroxscaffold_4G00303110 Rroxscaffold_4G00303120 Rroxscaffold_4G00322280 Rroxscaffold_5G00356200 Rroxscaffold_6G00399150 Rroxscaffold_6G00399290 Rroxscaffold_7G00194770
rosa_rugosa Rorug01G0225300 Rorug01G0225400 Rorug01G0225800 Rorug01G0226000 Rorug01G0339400 Rorug01G0451500 Rorug03G0196900 Rorug03G0294900 Rorug04G0107500 Rorug04G0107600 Rorug04G0129700 Rorug04G0178000 Rorug05G0144900.1 Rorug05G0145000 Rorug05G0228000 Rorug05G0228600 Rorug06G0078300 Rorug06G0508000 Rorug06G0508100 Rorug06G0508100 Rorug06G0508400 Rorug06G0513400 Rorug07G0000100 Rorug07G0000200 Rorug07G0000300 Rorug07G0000500 Rorug07G0000800
rosa_samantha Rh1BG060400 Rh1BG210300 Rh1BG210700 Rh1BG210800 Rh1BG309800 Rh1CG223800 Rh1CG224200 Rh1CG325200 Rh1DG237000 Rh1DG237400 Rh1DG341600 Rh2DG365700 Rh3AG212500 Rh3AG248400 Rh3CG239800 Rh3DG239300 Rh4AG169300 Rh4BG166200 Rh4BG240500 Rh4BG240600 Rh4DG163600 Rh5AG249600 Rh5AG249900 Rh5AG250000 Rh5CG283100 Rh5CG283200 Rh5CG283400 Rh5DG259200 Rh5DG259800 Rh6BG197700 Rh6CG197800 Rh6DG189400 Rh7AG114900 Rh7AG115000 Rh7AG115200 Rh7AG115300 Rh7AG115400 Rh7AG115500 Rh7AG123900 Rh7AG124100 Rh7AG124300 Rh7BG117200 Rh7BG117400 Rh7BG118400 Rh7BG125400 Rh7BG125600 Rh7BG125700 Rh7BG125800 Rh7BG125900 Rh7BG126000 Rh7BG126400 Rh7BG126600 Rh7BG126700 Rh7BG166200 Rh7DG118600 Rh7DG118700 Rh7DG118900 Rh7DG119000 Rh7DG119100 Rh7DG127400 Rh7DG127600 Rh7DG127700 Rh7DG127900 Rh7DG128200
rosa_wichuraiana Rw1G013270 Rw1G020790 Rw2G027890 Rw2G028040 Rw3G019240 Rw4G014070 Rw4G020540 Rw5G021320 Rw5G022970 Rw6G016920 Rw7G010020 Rw7G010040 Rw7G010580 Rw7G010590 Rw7G010600 Rw7G010610 Rw7G010620 Rw7G010630 Rw7G010640 Rw7G010690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 258
AciI CCGC 1 cut(s) 256
AclI AACGTT 1 cut(s) 564
AclWI GGATC 3 cut(s) 178, 1139, 1268
AcoI YGGCCR 1 cut(s) 712
AcsI RAATTY 1 cut(s) 768
AdeI CACNNNGTG 1 cut(s) 1075
AfaI GTAC 4 cut(s) 33, 85, 368, 503
AfiI CCNNNNNNNGG 3 cut(s) 125, 877, 1401
AgsI TTSAA 5 cut(s) 400, 674, 875, 1277, 1330
AhdI GACNNNNNGTC 1 cut(s) 346
AhlI ACTAGT 2 cut(s) 80, 1048
AjnI CCWGG 1 cut(s) 1267
AluBI AGCT 5 cut(s) 179, 322, 527, 892, 1250
AluI AGCT 5 cut(s) 179, 322, 527, 892, 1250
Alw26I GTCTC 5 cut(s) 241, 333, 367, 945, 1010
AlwI GGATC 3 cut(s) 178, 1139, 1268
Ama87I CYCGRG 1 cut(s) 1148
AoxI GGCC 2 cut(s) 190, 712
ApeKI GCWGC 2 cut(s) 322, 842
ApoI RAATTY 1 cut(s) 768
AspA2I CCTAGG 1 cut(s) 1055
AspLEI GCGC 1 cut(s) 355
AspS9I GGNCC 1 cut(s) 191
AsuHPI GGTGA 2 cut(s) 128, 374
AvaI CYCGRG 1 cut(s) 1148
AvrII CCTAGG 1 cut(s) 1055
BalI TGGCCA 1 cut(s) 714
BanII GRGCYC 1 cut(s) 256
BarI GAAGNNNNNNTAC 4 cut(s) 21, 53, 311, 343
BbvCI CCTCAGC 1 cut(s) 246
BbvI GCAGC 2 cut(s) 309, 829
BccI CCATC 2 cut(s) 704, 901
BciT130I CCWGG 1 cut(s) 1269
BcoDI GTCTC 5 cut(s) 241, 333, 367, 945, 1010
BcuI ACTAGT 2 cut(s) 80, 1048
BfaI CTAG 6 cut(s) 41, 81, 143, 1049, 1056, 1118
BfmI CTRYAG 1 cut(s) 923
BfoI RGCGCY 1 cut(s) 356
BisI GCNGC 2 cut(s) 323, 843
BlnI CCTAGG 1 cut(s) 1055
BlsI GCNGC 2 cut(s) 324, 844
BmcAI AGTACT 2 cut(s) 33, 368
Bme1390I CCNGG 1 cut(s) 1269
BmeRI GACNNNNNGTC 1 cut(s) 346
BmeT110I CYCGRG 1 cut(s) 1148
BmgT120I GGNCC 1 cut(s) 191
BmiI GGNNCC 2 cut(s) 193, 253
BmrFI CCNGG 1 cut(s) 1269
BmsI GCATC 3 cut(s) 494, 567, 910
BoxI GACNNNNGTC 1 cut(s) 308
BpmI CTGGAG 2 cut(s) 391, 1020
Bpu10I CCTNAGC 2 cut(s) 175, 246
Bsa29I ATCGAT 1 cut(s) 461
BsaJI CCNNGG 6 cut(s) 124, 187, 240, 1055, 1267, 1305
BsaXI ACNNNNNCTCC 2 cut(s) 99, 129
Bsc4I CCNNNNNNNGG 3 cut(s) 125, 877, 1401
Bse1I ACTGG 6 cut(s) 374, 509, 768, 988, 1037, 1390
Bse3DI GCAATG 1 cut(s) 888
BseBI CCWGG 1 cut(s) 1269
BseCI ATCGAT 1 cut(s) 461
BseDI CCNNGG 6 cut(s) 124, 187, 240, 1055, 1267, 1305
BseGI GGATG 2 cut(s) 901, 979
BseLI CCNNNNNNNGG 3 cut(s) 125, 877, 1401
BseMI GCAATG 1 cut(s) 888
BseMII CTCAG 4 cut(s) 194, 237, 398, 510
BseNI ACTGG 6 cut(s) 374, 509, 768, 988, 1037, 1390
BseRI GAGGAG 3 cut(s) 194, 229, 1184
BseXI GCAGC 2 cut(s) 309, 829
BsgI GTGCAG 1 cut(s) 974
Bsh1236I CGCG 1 cut(s) 258
Bsh1285I CGRYCG 1 cut(s) 309
BshFI GGCC 2 cut(s) 192, 714
BshVI ATCGAT 1 cut(s) 461
BsiEI CGRYCG 1 cut(s) 309
BsiHKCI CYCGRG 1 cut(s) 1148
BsiSI CCGG 1 cut(s) 846
BslFI GGGAC 2 cut(s) 206, 567
BslI CCNNNNNNNGG 3 cut(s) 125, 877, 1401
BsmAI GTCTC 5 cut(s) 241, 333, 367, 945, 1010
BsmBI CGTCTC 1 cut(s) 333
BsmFI GGGAC 2 cut(s) 206, 567
BsmI GAATGC 2 cut(s) 613, 1129
BsnI GGCC 2 cut(s) 192, 714
BsoBI CYCGRG 1 cut(s) 1148
Bsp1286I GDGCHC 1 cut(s) 256
Bsp143I GATC 5 cut(s) 183, 261, 465, 1144, 1260
Bsp19I CCATGG 1 cut(s) 187
BspACI CCGC 1 cut(s) 256
BspANI GGCC 2 cut(s) 192, 714
BspCNI CTCAG 4 cut(s) 193, 238, 399, 511
BspDI ATCGAT 1 cut(s) 461
BspFNI CGCG 1 cut(s) 258
BspHI TCATGA 2 cut(s) 264, 912
BspLI GGNNCC 2 cut(s) 193, 253
BspMAI CTGCAG 1 cut(s) 927
BspPI GGATC 3 cut(s) 178, 1139, 1268
BsrDI GCAATG 1 cut(s) 888
BsrI ACTGG 6 cut(s) 374, 509, 768, 988, 1037, 1390
BssECI CCNNGG 6 cut(s) 124, 187, 240, 1055, 1267, 1305
BssMI GATC 5 cut(s) 183, 261, 465, 1144, 1260
BssT1I CCWWGG 3 cut(s) 187, 1055, 1305
Bst2UI CCWGG 1 cut(s) 1269
Bst4CI ACNGT 3 cut(s) 307, 602, 645
Bst6I CTCTTC 3 cut(s) 377, 441, 1135
BstC8I GCNNGC 4 cut(s) 164, 256, 681, 1028
BstDEI CTNAG 6 cut(s) 11, 175, 180, 246, 407, 519
BstDSI CCRYGG 1 cut(s) 187
BstF5I GGATG 2 cut(s) 901, 979
BstFNI CGCG 1 cut(s) 258
BstH2I RGCGCY 1 cut(s) 356
BstHHI GCGC 1 cut(s) 355
BstKTI GATC 5 cut(s) 186, 264, 468, 1147, 1263
BstMAI GTCTC 5 cut(s) 241, 333, 367, 945, 1010
BstMBI GATC 5 cut(s) 183, 261, 465, 1144, 1260
BstMCI CGRYCG 1 cut(s) 309
BstMWI GCNNNNNNNGC 4 cut(s) 251, 432, 617, 898
BstNI CCWGG 1 cut(s) 1269
BstNSI RCATGY 1 cut(s) 683
BstPAI GACNNNNGTC 1 cut(s) 308
BstSCI CCNGG 1 cut(s) 1267
BstSFI CTRYAG 1 cut(s) 923
BstUI CGCG 1 cut(s) 258
BstV1I GCAGC 2 cut(s) 309, 829
BstX2I RGATCY 3 cut(s) 183, 1144, 1260
BstYI RGATCY 3 cut(s) 183, 1144, 1260
Bsu15I ATCGAT 1 cut(s) 461
BsuRI GGCC 2 cut(s) 192, 714
BsuTUI ATCGAT 1 cut(s) 461
BtgI CCRYGG 1 cut(s) 187
BtgZI GCGATG 1 cut(s) 143
BtsCI GGATG 2 cut(s) 901, 979
BtsI GCAGTG 2 cut(s) 1011, 1284
BtsIMutI CAGTG 2 cut(s) 1011, 1284
Cac8I GCNNGC 4 cut(s) 164, 256, 681, 1028
CciI TCATGA 2 cut(s) 264, 912
CfoI GCGC 1 cut(s) 355
Cfr13I GGNCC 1 cut(s) 191
ClaI ATCGAT 1 cut(s) 461
CseI GACGC 3 cut(s) 208, 336, 564
Csp6I GTAC 4 cut(s) 32, 84, 367, 502
CviQI GTAC 4 cut(s) 32, 84, 367, 502
DdeI CTNAG 6 cut(s) 11, 175, 180, 246, 407, 519
DpnI GATC 5 cut(s) 185, 263, 467, 1146, 1262
DpnII GATC 5 cut(s) 183, 261, 465, 1144, 1260
DraI TTTAAA 1 cut(s) 999
DraIII CACNNNGTG 1 cut(s) 1075
DriI GACNNNNNGTC 1 cut(s) 346
EaeI YGGCCR 1 cut(s) 712
Eam1104I CTCTTC 3 cut(s) 377, 441, 1135
Eam1105I GACNNNNNGTC 1 cut(s) 346
EarI CTCTTC 3 cut(s) 377, 441, 1135
Eco130I CCWWGG 3 cut(s) 187, 1055, 1305
Eco24I GRGCYC 1 cut(s) 256
Eco88I CYCGRG 1 cut(s) 1148
EcoRII CCWGG 1 cut(s) 1267
EcoT14I CCWWGG 3 cut(s) 187, 1055, 1305
EcoT22I ATGCAT 1 cut(s) 1129
EcoT38I GRGCYC 1 cut(s) 256
ErhI CCWWGG 3 cut(s) 187, 1055, 1305
Esp3I CGTCTC 1 cut(s) 333
FaqI GGGAC 2 cut(s) 206, 567
FauI CCCGC 1 cut(s) 263
Fnu4HI GCNGC 2 cut(s) 323, 843
FokI GGATG 2 cut(s) 888, 986
FriOI GRGCYC 1 cut(s) 256
Fsp4HI GCNGC 2 cut(s) 323, 843
FspBI CTAG 6 cut(s) 41, 81, 143, 1049, 1056, 1118
GlaI GCGC 1 cut(s) 354
GluI GCNGC 2 cut(s) 323, 843
GsuI CTGGAG 2 cut(s) 391, 1020
HaeII RGCGCY 1 cut(s) 356
HaeIII GGCC 2 cut(s) 192, 714
HapII CCGG 1 cut(s) 846
HgaI GACGC 3 cut(s) 208, 336, 564
HhaI GCGC 1 cut(s) 355
Hin6I GCGC 1 cut(s) 353
HinP1I GCGC 1 cut(s) 353
HinfI GANTC 6 cut(s) 400, 670, 934, 1151, 1195, 1379
HpaII CCGG 1 cut(s) 846
HphI GGTGA 2 cut(s) 128, 374
Hpy166II GTNNAC 1 cut(s) 754
Hpy188I TCNGA 9 cut(s) 128, 183, 338, 408, 520, 694, 774, 906, 950
Hpy188III TCNNGA 7 cut(s) 265, 542, 674, 913, 1148, 1166, 1192
Hpy8I GTNNAC 1 cut(s) 754
HpyAV CCTTC 5 cut(s) 111, 143, 205, 507, 1251
HpyCH4III ACNGT 3 cut(s) 307, 602, 645
HpyCH4IV ACGT 3 cut(s) 342, 564, 756
HpyCH4V TGCA 6 cut(s) 683, 925, 991, 1030, 1127, 1321
HpyF10VI GCNNNNNNNGC 4 cut(s) 251, 432, 617, 898
HpyF3I CTNAG 6 cut(s) 11, 175, 180, 246, 407, 519
HpySE526I ACGT 3 cut(s) 342, 564, 756
HspAI GCGC 1 cut(s) 353
Kzo9I GATC 5 cut(s) 183, 261, 465, 1144, 1260
LmnI GCTCC 4 cut(s) 207, 251, 1247, 1349
Lsp1109I GCAGC 2 cut(s) 309, 829
LweI GCATC 3 cut(s) 494, 567, 910
MaeI CTAG 6 cut(s) 41, 81, 143, 1049, 1056, 1118
MaeII ACGT 3 cut(s) 342, 564, 756
MaeIII GTNAC 1 cut(s) 147
MalI GATC 5 cut(s) 185, 263, 467, 1146, 1262
MboI GATC 5 cut(s) 183, 261, 465, 1144, 1260
MboII GAAGA 6 cut(s) 49, 394, 395, 458, 1152, 1373
MfeI CAATTG 1 cut(s) 1330
MflI RGATCY 3 cut(s) 183, 1144, 1260
MhlI GDGCHC 1 cut(s) 256
MlsI TGGCCA 1 cut(s) 714
MluCI AATT 7 cut(s) 331, 545, 623, 768, 1277, 1330, 1337
MluNI TGGCCA 1 cut(s) 714
MlyI GAGTC 1 cut(s) 1160
MmeI TCCRAC 2 cut(s) 315, 1255
Mox20I TGGCCA 1 cut(s) 714
Mph1103I ATGCAT 1 cut(s) 1129
MscI TGGCCA 1 cut(s) 714
MseI TTAA 7 cut(s) 575, 896, 998, 1011, 1098, 1293, 1416
Msp20I TGGCCA 1 cut(s) 714
MspI CCGG 1 cut(s) 846
MspR9I CCNGG 1 cut(s) 1269
MunI CAATTG 1 cut(s) 1330
Mva1269I GAATGC 2 cut(s) 613, 1129
MvaI CCWGG 1 cut(s) 1269
MvnI CGCG 1 cut(s) 258
MwoI GCNNNNNNNGC 4 cut(s) 251, 432, 617, 898
NcoI CCATGG 1 cut(s) 187
NdeII GATC 5 cut(s) 183, 261, 465, 1144, 1260
NlaIV GGNNCC 2 cut(s) 193, 253
NmeAIII GCCGAG 1 cut(s) 221
NsiI ATGCAT 1 cut(s) 1129
NspI RCATGY 1 cut(s) 683
PaeI GCATGC 1 cut(s) 683
PagI TCATGA 2 cut(s) 264, 912
PcsI WCGNNNNNNNCGW 1 cut(s) 166
PctI GAATGC 2 cut(s) 613, 1129
PfeI GAWTC 5 cut(s) 400, 670, 934, 1195, 1379
PkrI GCNGC 2 cut(s) 324, 844
PleI GAGTC 1 cut(s) 1159
PpsI GAGTC 1 cut(s) 1159
PshAI GACNNNNGTC 1 cut(s) 308
Psp1406I AACGTT 1 cut(s) 564
Psp6I CCWGG 1 cut(s) 1267
PspGI CCWGG 1 cut(s) 1267
PspN4I GGNNCC 2 cut(s) 193, 253
PspPI GGNCC 1 cut(s) 191
PstI CTGCAG 1 cut(s) 927
PsuI RGATCY 3 cut(s) 183, 1144, 1260
RsaI GTAC 4 cut(s) 33, 85, 368, 503
RsaNI GTAC 4 cut(s) 32, 84, 367, 502
SaqAI TTAA 7 cut(s) 575, 896, 998, 1011, 1098, 1293, 1416
SatI GCNGC 2 cut(s) 323, 843
Sau3AI GATC 5 cut(s) 183, 261, 465, 1144, 1260
Sau96I GGNCC 1 cut(s) 191
ScaI AGTACT 2 cut(s) 33, 368
SchI GAGTC 1 cut(s) 1160
ScrFI CCNGG 1 cut(s) 1269
SduI GDGCHC 1 cut(s) 256
SfaNI GCATC 3 cut(s) 494, 567, 910
SfcI CTRYAG 1 cut(s) 923
SpeI ACTAGT 2 cut(s) 80, 1048
SphI GCATGC 1 cut(s) 683
Sse9I AATT 7 cut(s) 331, 545, 623, 768, 1277, 1330, 1337
SsiI CCGC 1 cut(s) 256
SspMI CTAG 6 cut(s) 41, 81, 143, 1049, 1056, 1118
StyD4I CCNGG 1 cut(s) 1267
StyI CCWWGG 3 cut(s) 187, 1055, 1305
TaaI ACNGT 3 cut(s) 307, 602, 645
TaiI ACGT 3 cut(s) 345, 567, 759
TaqI TCGA 5 cut(s) 169, 461, 468, 801, 937
TasI AATT 7 cut(s) 331, 545, 623, 768, 1277, 1330, 1337
TatI WGTACW 4 cut(s) 31, 83, 366, 501
TfiI GAWTC 5 cut(s) 400, 670, 934, 1195, 1379
Tru1I TTAA 7 cut(s) 575, 896, 998, 1011, 1098, 1293, 1416
Tru9I TTAA 7 cut(s) 575, 896, 998, 1011, 1098, 1293, 1416
TscAI CASTG 2 cut(s) 1011, 1291
TseI GCWGC 2 cut(s) 322, 842
TspDTI ATGAA 7 cut(s) 49, 187, 281, 395, 855, 929, 1430
TspGWI ACGGA 2 cut(s) 983, 1391
TspRI CASTG 2 cut(s) 1011, 1291
XapI RAATTY 1 cut(s) 768
XceI RCATGY 1 cut(s) 683
XcmI CCANNNNNNNNNTGG 1 cut(s) 588
XmaJI CCTAGG 1 cut(s) 1055
XspI CTAG 6 cut(s) 41, 81, 143, 1049, 1056, 1118
ZrmI AGTACT 2 cut(s) 33, 368
Zsp2I ATGCAT 1 cut(s) 1129
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.