MD06G1164000.v1.1

Cytochrome p450

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr06
OG0000061
Physical Location & Seq
Reverse (-)
30471651 .. 30473667
2017 bp
Loading structure...
UTR
Exon/CDS
Intron
MD06G1164000.v1.1.491

Sequence Viewer

Length: 1530 bp
ATGCTGCACCTGTTTCTAATTGTCCTTCCCTTCCTGATTTTCACAATCTTCATCATCAAACGGCTTTGGAGCACTACAATTTCACTGAAACACTTGCCTCCTTCACCGCCAAGGCTCCCAATACTCGGAAACCTCCACCAACTAGGCACGTACCCTCACCGATCCCTACAACGATTAGCTCAGCGCTATGGCGAGCTCATGGTGCTTCATCTTGGCGCGAGACCAGTTCTCATCATTTCATCAGCCGACGCTGCTCGTGAGATCATGAAAACGAATGATAGCATTTTTGCCAACAGACCAAGATCAACAATTGCCGATAGACTTCTCTACGGATCTAAAAGTGTGTCCTCAGCTCCTTACGGTGAGTATTGGAGGCATATGAGAAGCATCTGCGTGCTGCAGCTTTTAACGAGCAAAAGGGTTCAGTCTTTTCGAGCAGTACGAGAAGAAGAACTAGCCTTGCTGACTAAGAATGTGAAACAGTCTTCTATGTCGTCTTTGCCTGTGAATTTAAGTGAATTGTTTATTTCACTTACTAATGATGTGATCTGTCGGGTGGCTTTCGGGAAAAAGTATAGTGGAGGTGAAGCTGCAAGGAAGTTCAAGAAATTGCTTGAGGAGTTTATGATCTTGTTGGGTGGTTTTTATGTAGGGGATTTTATTCCACTACTCGGTTGGGTTAGTCGCGTTAACGGGTTAGACACAAGAGTGGAGAAGGTTGCTAGAGAGTTTGATGAGTTTCTGGAGTCTGTAGTTGAAGAGCATATGTGTAGTCTTGACACAAAAGGCGAAAACTGCGGTAATAATTCGAGTGTTGAAGGTGAAGATAAGAAGGATCTTGTGGATGTCCTGCTCGAAATTCAAAAGCAAAACACGGCTGGCTTTTCAATTGATAGAGATAGCATCAAAGGTATCATCTTGGATATTTTTGGTGGCGGAACTGATACTAGCTACACGGTTCTAGAGTGGGCAATGACCGAACTCTTAAGGCATCCAAGAGTGTTGGAGAAACTGCAAAATGAGCTGATGGGAATTGCTACTGGAAAACCAGACATAACAGAAAGTGATTTAGATAAAACTCCCTACTTAAAAGCCGTGATCAAAGAGACACTTCGGTTGTATCCTCCAATACCGTTACTAGTTCCTCGTGAATCAACTCAAGCAACTAAAATAAGGGGCTACGACGTAGCAGCAAGAACAATGGTCATAATCAATGCTTGGACAATTGGAAGAGACCCCTCATTGTGGGATGAACCAGAGGAGTTTAAACCAGATAGGTTTCTGAATTCTTCAGTGGATTTCAAGGGGAATGACTTCGAATTAATCCCATTTGGAGCTGGAAGAAGGGGTTGCCCTGGATCCTTGTTTGCCATGGCCACCAATGAGATTGTGTTAGCAAATCTTGTGCACAAATTTGACTGGACATTGCCCGACGGAGCAAGAGCAAAAGATTTAAGCATGGAAGAATGCACCGGTCTTGTCATCCATCGGAAAGCTCCCCTTGTAGTTATGGCAATACCAAGGTTCTAG

Protein Analysis

510

Amino Acids

57.27

Weight (kDa)

8.1

Isoelectric Point (pI)

33.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 33 - 498 1.6e-101 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000061)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G48270 AT3G48280 AT3G48290 AT3G48290 AT3G48300 AT3G48300 AT3G48310 AT3G48320 AT4G20235 AT4G20235
fragaria_vesca FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g36190 FvH4_3g14160 FvH4_3g14210 FvH4_3g14260 FvH4_3g14260 FvH4_3g21100 FvH4_3g21380 FvH4_4g24460 FvH4_4g24500 FvH4_5g06571 FvH4_5g06571 FvH4_5g06571 FvH4_5g06571 FvH4_5g06572 FvH4_5g06573 FvH4_5g06574 FvH4_5g06575 FvH4_5g06576 FvH4_5g06577 FvH4_5g06577 FvH4_5g07540 FvH4_5g07550 FvH4_5g07560 FvH4_5g07570 FvH4_5g29491 FvH4_5g29492 FvH4_6g23870 FvH4_6g23880 FvH4_6g26870 FvH4_7g11861 FvH4_7g11862 FvH4_7g13050 FvH4_7g13060 FvH4_7g13080 FvH4_7g13080 FvH4_7g22630 FvH4_7g22650 FvH4_7g22651 FvH4_7g23020
malus_domestica MD03G1207400.v1.1 MD03G1214800.v1.1 MD03G1218500.v1.1 MD06G1163100.v1.1 MD06G1163300.v1.1 MD06G1163400.v1.1 MD06G1163500.v1.1 MD06G1163600.v1.1 MD06G1163800.v1.1 MD06G1164000.v1.1 MD06G1164100.v1.1 MD06G1224400.v1.1 MD08G1222800.v1.1 MD08G1222900.v1.1 MD08G1223100.v1.1 MD11G1091500.v1.1 MD11G1091800.v1.1 MD14G1163200.v1.1 MD14G1169000.v1.1 MD15G1207200.v1.1 MD15G1207300.v1.1 MD17G1259400.v1.1
prunus_persica Prupe.4G198100_v2.0.a1 Prupe.4G199100_v2.0.a1 Prupe.4G199400_v2.0.a1 Prupe.4G199800_v2.0.a1 Prupe.4G225200_v2.0.a1 Prupe.4G239100_v2.0.a1 Prupe.5G156600_v2.0.a1 Prupe.5G163500_v2.0.a1 Prupe.7G209500_v2.0.a1 Prupe.I003400_v2.0.a1
pyrus_communis pycom03g16340 pycom06g14600 pycom06g14610 pycom06g14620 pycom06g14630 pycom06g14640 pycom06g14670 pycom06g14690 pycom08g19390 pycom08g19400 pycom08g19410 pycom11g07600 pycom11g07610 pycom11g07620 pycom11g07660 pycom14g13580 pycom14g14080 pycom14g14100 pycom14g14110 pycom15g18380 pycom17g26080
rosa_chinensis RchiOBHm_Chr1g0339441 RchiOBHm_Chr1g0339451 RchiOBHm_Chr1g0352191 RchiOBHm_Chr1g0368221 RchiOBHm_Chr2g0129531 RchiOBHm_Chr2g0129541 RchiOBHm_Chr3g0477631 RchiOBHm_Chr3g0482551 RchiOBHm_Chr3g0482561 RchiOBHm_Chr3g0482571 RchiOBHm_Chr4g0411601 RchiOBHm_Chr4g0422181 RchiOBHm_Chr5g0036661 RchiOBHm_Chr5g0036731 RchiOBHm_Chr6g0274021 RchiOBHm_Chr7g0190921 RchiOBHm_Chr7g0190931 RchiOBHm_Chr7g0190941 RchiOBHm_Chr7g0190951 RchiOBHm_Chr7g0190961 RchiOBHm_Chr7g0190971 RchiOBHm_Chr7g0191001 RchiOBHm_Chr7g0191011 RchiOBHm_Chr7g0191021 RchiOBHm_Chr7g0192181 RchiOBHm_Chr7g0192191 RchiOBHm_Chr7g0192201 RchiOBHm_Chr7g0192221 RchiOBHm_Chr7g0192231 RchiOBHm_Chr7g0192281 RchiOBHm_Chr7g0197311
rosa_laevigata RLG00000003942 RLG00000004345 RLG00000004379 RLG00000004383 RLG00000004384 RLG00000004385 RLG00000004387 RLG00000004388 RLG00000004389 RLG00000004480 RLG00000004481 RLG00000004482 RLG00000004483 RLG00000004485 RLG00000008342 RLG00000008401 RLG00000013583 RLG00000017044 RLG00000027229 RLG00000028349 RLG00000028350 RLG00000028353 RLG00000028820 RLG00000033707 RLG00000033710
rosa_multiflora Rmu_co8020340.1_g000001 Rmu_co8096640.1_g000001 Rmu_co8214930.1_g000001 Rmu_co8223272.1_g000001 Rmu_co8282535.1_g000001 Rmu_co8343567.1_g000001 Rmu_co8404191.1_g000001 Rmu_co8455157.1_g000001 Rmu_sc0000062.1_g000028 Rmu_sc0000082.1_g000091 Rmu_sc0000509.1_g000017 Rmu_sc0000775.1_g000001 Rmu_sc0000999.1_g000034 Rmu_sc0001559.1_g000004 Rmu_sc0001559.1_g000009 Rmu_sc0002164.1_g000001 Rmu_sc0002164.1_g000005 Rmu_sc0002164.1_g000007 Rmu_sc0002164.1_g000008 Rmu_sc0002164.1_g000009 Rmu_sc0002164.1_g000019 Rmu_sc0002247.1_g000009 Rmu_sc0002373.1_g000002 Rmu_sc0002373.1_g000003 Rmu_sc0002944.1_g000059 Rmu_sc0003930.1_g000004 Rmu_sc0004958.1_g000001 Rmu_sc0005197.1_g000014 Rmu_sc0005898.1_g000008 Rmu_sc0005898.1_g000009 Rmu_sc0005898.1_g000015 Rmu_sc0006059.1_g000004 Rmu_sc0006059.1_g000010 Rmu_sc0006903.1_g000007 Rmu_sc0006903.1_g000008 Rmu_sc0006968.1_g000001 Rmu_sc0011009.1_g000009 Rmu_sc0022852.1_g000002 Rmu_sc0033854.1_g000001 Rmu_ssc0000421.1_g000057 Rmu_ssc0000421.1_g000067 Rmu_ssc0000421.1_g000069 Rmu_ssc0000421.1_g000072 Rmu_ssc0000421.1_g000081 Rmu_ssc0000421.1_g000086
rosa_roxburghii Rroxscaffold_158G00443680 Rroxscaffold_158G00443710 Rroxscaffold_158G00443720 Rroxscaffold_158G00443740 Rroxscaffold_1G00034950 Rroxscaffold_1G00044240 Rroxscaffold_1G00044270 Rroxscaffold_3G00241380 Rroxscaffold_3G00247000 Rroxscaffold_3G00263120 Rroxscaffold_3G00263150 Rroxscaffold_3G00263160 Rroxscaffold_3G00263170 Rroxscaffold_3G00263180 Rroxscaffold_3G00263190 Rroxscaffold_3G00263210 Rroxscaffold_3G00263230 Rroxscaffold_3G00263260 Rroxscaffold_3G00264110 Rroxscaffold_3G00264130 Rroxscaffold_3G00264160 Rroxscaffold_3G00264180 Rroxscaffold_3G00264200 Rroxscaffold_4G00288750 Rroxscaffold_4G00303110 Rroxscaffold_4G00303120 Rroxscaffold_4G00322280 Rroxscaffold_5G00356200 Rroxscaffold_6G00399150 Rroxscaffold_6G00399290 Rroxscaffold_7G00194770
rosa_rugosa Rorug01G0225300 Rorug01G0225400 Rorug01G0225800 Rorug01G0226000 Rorug01G0339400 Rorug01G0451500 Rorug03G0196900 Rorug03G0294900 Rorug04G0107500 Rorug04G0107600 Rorug04G0129700 Rorug04G0178000 Rorug05G0144900.1 Rorug05G0145000 Rorug05G0228000 Rorug05G0228600 Rorug06G0078300 Rorug06G0508000 Rorug06G0508100 Rorug06G0508100 Rorug06G0508400 Rorug06G0513400 Rorug07G0000100 Rorug07G0000200 Rorug07G0000300 Rorug07G0000500 Rorug07G0000800
rosa_samantha Rh1BG060400 Rh1BG210300 Rh1BG210700 Rh1BG210800 Rh1BG309800 Rh1CG223800 Rh1CG224200 Rh1CG325200 Rh1DG237000 Rh1DG237400 Rh1DG341600 Rh2DG365700 Rh3AG212500 Rh3AG248400 Rh3CG239800 Rh3DG239300 Rh4AG169300 Rh4BG166200 Rh4BG240500 Rh4BG240600 Rh4DG163600 Rh5AG249600 Rh5AG249900 Rh5AG250000 Rh5CG283100 Rh5CG283200 Rh5CG283400 Rh5DG259200 Rh5DG259800 Rh6BG197700 Rh6CG197800 Rh6DG189400 Rh7AG114900 Rh7AG115000 Rh7AG115200 Rh7AG115300 Rh7AG115400 Rh7AG115500 Rh7AG123900 Rh7AG124100 Rh7AG124300 Rh7BG117200 Rh7BG117400 Rh7BG118400 Rh7BG125400 Rh7BG125600 Rh7BG125700 Rh7BG125800 Rh7BG125900 Rh7BG126000 Rh7BG126400 Rh7BG126600 Rh7BG126700 Rh7BG166200 Rh7DG118600 Rh7DG118700 Rh7DG118900 Rh7DG119000 Rh7DG119100 Rh7DG127400 Rh7DG127600 Rh7DG127700 Rh7DG127900 Rh7DG128200
rosa_wichuraiana Rw1G013270 Rw1G020790 Rw2G027890 Rw2G028040 Rw3G019240 Rw4G014070 Rw4G020540 Rw5G021320 Rw5G022970 Rw6G016920 Rw7G010020 Rw7G010040 Rw7G010580 Rw7G010590 Rw7G010600 Rw7G010610 Rw7G010620 Rw7G010630 Rw7G010640 Rw7G010690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 2 cut(s) 218, 687
AciI CCGC 3 cut(s) 107, 798, 936
AclWI GGATC 5 cut(s) 156, 340, 843, 1353, 1366
AcoI YGGCCR 1 cut(s) 1374
AcsI RAATTY 4 cut(s) 508, 858, 1285, 1412
AcuI CTGAAG 1 cut(s) 1275
AfaI GTAC 2 cut(s) 152, 441
AfeI AGCGCT 1 cut(s) 185
AfiI CCNNNNNNNGG 3 cut(s) 125, 671, 1245
AflII CTTAAG 1 cut(s) 985
AgeI ACCGGT 1 cut(s) 1472
AgsI TTSAA 6 cut(s) 604, 758, 818, 863, 888, 1303
AhlI ACTAGT 1 cut(s) 1138
AjnI CCWGG 1 cut(s) 1354
AleI CACNNNNGTG 1 cut(s) 707
AluBI AGCT 9 cut(s) 179, 196, 353, 403, 590, 951, 1024, 1337, 1496
AluI AGCT 9 cut(s) 179, 196, 353, 403, 590, 951, 1024, 1337, 1496
Alw21I GWGCWC 3 cut(s) 74, 198, 1410
Alw26I GTCTC 3 cut(s) 214, 1100, 1227
Alw44I GTGCAC 1 cut(s) 1406
AlwI GGATC 5 cut(s) 156, 340, 843, 1353, 1366
Aor51HI AGCGCT 1 cut(s) 185
AoxI GGCC 1 cut(s) 1374
ApaLI GTGCAC 1 cut(s) 1406
ApeKI GCWGC 6 cut(s) 4, 251, 397, 400, 590, 1190
ApoI RAATTY 4 cut(s) 508, 858, 1285, 1412
AseI ATTAAT 1 cut(s) 1322
AsiGI ACCGGT 1 cut(s) 1472
Asp700I GAANNNNTTC 1 cut(s) 1313
AspLEI GCGC 2 cut(s) 186, 218
AsuHPI GGTGA 5 cut(s) 96, 149, 374, 596, 833
AsuII TTCGAA 1 cut(s) 1317
BaeGI GKGCMC 1 cut(s) 1410
BalI TGGCCA 1 cut(s) 1376
BamHI GGATCC 1 cut(s) 1358
BanII GRGCYC 1 cut(s) 198
BauI CACGAG 2 cut(s) 255, 1146
BbsI GAAGAC 1 cut(s) 477
Bbv12I GWGCWC 3 cut(s) 74, 198, 1410
BbvCI CCTCAGC 1 cut(s) 349
BbvI GCAGC 5 cut(s) 238, 384, 412, 577, 1202
BccI CCATC 2 cut(s) 1021, 1494
BceAI ACGGC 3 cut(s) 77, 891, 1079
BciT130I CCWGG 1 cut(s) 1356
BciVI GTATCC 1 cut(s) 1131
BclI TGATCA 1 cut(s) 1098
BcoDI GTCTC 3 cut(s) 214, 1100, 1227
BcuI ACTAGT 1 cut(s) 1138
BfaI CTAG 7 cut(s) 143, 455, 723, 948, 962, 1139, 1528
BfmI CTRYAG 2 cut(s) 398, 750
BfoI RGCGCY 1 cut(s) 187
BfrI CTTAAG 1 cut(s) 985
BfuI GTATCC 1 cut(s) 1131
BisI GCNGC 6 cut(s) 5, 252, 398, 401, 591, 1191
BlpI GCTNAGC 1 cut(s) 180
BlsI GCNGC 6 cut(s) 6, 253, 399, 402, 592, 1192
Bme1390I CCNGG 1 cut(s) 1356
BmiI GGNNCC 2 cut(s) 116, 1360
BmrFI CCNGG 1 cut(s) 1356
BmsI GCATC 3 cut(s) 396, 912, 1000
BpiI GAAGAC 1 cut(s) 477
BpmI CTGGAG 1 cut(s) 764
Bpu10I CCTNAGC 1 cut(s) 349
Bpu1102I GCTNAGC 1 cut(s) 180
Bpu14I TTCGAA 1 cut(s) 1317
BpuEI CTTGAG 2 cut(s) 635, 1143
BsaAI YACGTR 1 cut(s) 150
BsaI GGTCTC 2 cut(s) 214, 1227
BsaJI CCNNGG 4 cut(s) 110, 1354, 1371, 1520
BsaWI WCCGGW 1 cut(s) 1472
Bsc4I CCNNNNNNNGG 3 cut(s) 125, 671, 1245
Bse118I RCCGGY 1 cut(s) 1472
Bse1I ACTGG 3 cut(s) 224, 1045, 1424
Bse3DI GCAATG 2 cut(s) 978, 1424
BseBI CCWGG 1 cut(s) 1356
BseDI CCNNGG 4 cut(s) 110, 1354, 1371, 1520
BseGI GGATG 4 cut(s) 850, 991, 1255, 1482
BseLI CCNNNNNNNGG 3 cut(s) 125, 671, 1245
BseMI GCAATG 2 cut(s) 978, 1424
BseMII CTCAG 2 cut(s) 194, 363
BseNI ACTGG 3 cut(s) 224, 1045, 1424
BseRI GAGGAG 2 cut(s) 632, 1274
BseSI GKGCMC 1 cut(s) 1410
BseXI GCAGC 5 cut(s) 238, 384, 412, 577, 1202
Bsh1236I CGCG 2 cut(s) 218, 687
BshFI GGCC 1 cut(s) 1376
BshTI ACCGGT 1 cut(s) 1472
BsiHKAI GWGCWC 3 cut(s) 74, 198, 1410
BsiSI CCGG 1 cut(s) 1473
BslI CCNNNNNNNGG 3 cut(s) 125, 671, 1245
BsmAI GTCTC 3 cut(s) 214, 1100, 1227
BsmI GAATGC 1 cut(s) 1472
BsnI GGCC 1 cut(s) 1376
Bso31I GGTCTC 2 cut(s) 214, 1227
Bsp119I TTCGAA 1 cut(s) 1317
Bsp1286I GDGCHC 3 cut(s) 74, 198, 1410
Bsp143I GATC 9 cut(s) 161, 261, 302, 332, 546, 627, 835, 1098, 1358
Bsp1720I GCTNAGC 1 cut(s) 180
Bsp19I CCATGG 1 cut(s) 1371
BspACI CCGC 3 cut(s) 107, 798, 936
BspANI GGCC 1 cut(s) 1376
BspCNI CTCAG 2 cut(s) 193, 362
BspFNI CGCG 2 cut(s) 218, 687
BspHI TCATGA 1 cut(s) 264
BspLI GGNNCC 2 cut(s) 116, 1360
BspMAI CTGCAG 1 cut(s) 402
BspPI GGATC 5 cut(s) 156, 340, 843, 1353, 1366
BspQI GCTCTTC 1 cut(s) 753
BspT104I TTCGAA 1 cut(s) 1317
BspTI CTTAAG 1 cut(s) 985
BspTNI GGTCTC 2 cut(s) 214, 1227
BsrDI GCAATG 2 cut(s) 978, 1424
BsrFI RCCGGY 1 cut(s) 1472
BsrI ACTGG 3 cut(s) 224, 1045, 1424
BssAI RCCGGY 1 cut(s) 1472
BssECI CCNNGG 4 cut(s) 110, 1354, 1371, 1520
BssMI GATC 9 cut(s) 161, 261, 302, 332, 546, 627, 835, 1098, 1358
BssSI CACGAG 2 cut(s) 255, 1146
BssT1I CCWWGG 3 cut(s) 110, 1371, 1520
Bst2BI CACGAG 2 cut(s) 255, 1146
Bst2UI CCWGG 1 cut(s) 1356
Bst4CI ACNGT 4 cut(s) 362, 483, 958, 1134
Bst6I CTCTTC 2 cut(s) 753, 1225
BstAFI CTTAAG 1 cut(s) 985
BstBAI YACGTR 1 cut(s) 150
BstBI TTCGAA 1 cut(s) 1317
BstC8I GCNNGC 3 cut(s) 194, 395, 880
BstDEI CTNAG 3 cut(s) 180, 349, 468
BstDSI CCRYGG 1 cut(s) 1371
BstF5I GGATG 4 cut(s) 850, 991, 1255, 1482
BstFNI CGCG 2 cut(s) 218, 687
BstH2I RGCGCY 1 cut(s) 187
BstHHI GCGC 2 cut(s) 186, 218
BstKTI GATC 9 cut(s) 164, 264, 305, 335, 549, 630, 838, 1101, 1361
BstMAI GTCTC 3 cut(s) 214, 1100, 1227
BstMBI GATC 9 cut(s) 161, 261, 302, 332, 546, 627, 835, 1098, 1358
BstMWI GCNNNNNNNGC 4 cut(s) 202, 251, 795, 1021
BstNI CCWGG 1 cut(s) 1356
BstSCI CCNGG 1 cut(s) 1354
BstSFI CTRYAG 2 cut(s) 398, 750
BstSLI GKGCMC 1 cut(s) 1410
BstUI CGCG 2 cut(s) 218, 687
BstV1I GCAGC 5 cut(s) 238, 384, 412, 577, 1202
BstV2I GAAGAC 1 cut(s) 477
BstX2I RGATCY 3 cut(s) 332, 835, 1358
BstYI RGATCY 3 cut(s) 332, 835, 1358
BsuI GTATCC 1 cut(s) 1131
BsuRI GGCC 1 cut(s) 1376
BtgI CCRYGG 1 cut(s) 1371
BtsCI GGATG 4 cut(s) 850, 991, 1255, 1482
BtsIMutI CAGTG 2 cut(s) 83, 1299
Cac8I GCNNGC 3 cut(s) 194, 395, 880
CciI TCATGA 1 cut(s) 264
CfoI GCGC 2 cut(s) 186, 218
Cfr10I RCCGGY 1 cut(s) 1472
CseI GACGC 1 cut(s) 257
Csp6I GTAC 2 cut(s) 151, 440
CspAI ACCGGT 1 cut(s) 1472
CviAII CATG 4 cut(s) 199, 265, 1372, 1459
CviQI GTAC 2 cut(s) 151, 440
DdeI CTNAG 3 cut(s) 180, 349, 468
DpnI GATC 9 cut(s) 163, 263, 304, 334, 548, 629, 837, 1100, 1360
DpnII GATC 9 cut(s) 161, 261, 302, 332, 546, 627, 835, 1098, 1358
DraI TTTAAA 1 cut(s) 1267
EaeI YGGCCR 1 cut(s) 1374
Eam1104I CTCTTC 2 cut(s) 753, 1225
EarI CTCTTC 2 cut(s) 753, 1225
EciI GGCGGA 1 cut(s) 951
Ecl136II GAGCTC 1 cut(s) 196
Eco130I CCWWGG 3 cut(s) 110, 1371, 1520
Eco24I GRGCYC 1 cut(s) 198
Eco31I GGTCTC 2 cut(s) 214, 1227
Eco47III AGCGCT 1 cut(s) 185
Eco53kI GAGCTC 1 cut(s) 196
Eco57I CTGAAG 1 cut(s) 1275
EcoICRI GAGCTC 1 cut(s) 196
EcoRI GAATTC 1 cut(s) 1285
EcoRII CCWGG 1 cut(s) 1354
EcoT14I CCWWGG 3 cut(s) 110, 1371, 1520
EcoT38I GRGCYC 1 cut(s) 198
ErhI CCWWGG 3 cut(s) 110, 1371, 1520
FaeI CATG 4 cut(s) 202, 268, 1375, 1462
FalI AAGNNNNNCTT 4 cut(s) 1095, 1127, 1485, 1517
FatI CATG 4 cut(s) 198, 264, 1371, 1458
FauNDI CATATG 2 cut(s) 378, 765
FbaI TGATCA 1 cut(s) 1098
Fnu4HI GCNGC 6 cut(s) 5, 252, 398, 401, 591, 1191
FokI GGATG 4 cut(s) 857, 978, 1262, 1469
FriOI GRGCYC 1 cut(s) 198
Fsp4HI GCNGC 6 cut(s) 5, 252, 398, 401, 591, 1191
FspBI CTAG 7 cut(s) 143, 455, 723, 948, 962, 1139, 1528
GlaI GCGC 2 cut(s) 185, 217
GluI GCNGC 6 cut(s) 5, 252, 398, 401, 591, 1191
GsuI CTGGAG 1 cut(s) 764
HaeII RGCGCY 1 cut(s) 187
HaeIII GGCC 1 cut(s) 1376
HapII CCGG 1 cut(s) 1473
HgaI GACGC 1 cut(s) 257
HhaI GCGC 2 cut(s) 186, 218
Hin1II CATG 4 cut(s) 202, 268, 1375, 1462
Hin6I GCGC 2 cut(s) 184, 216
HinP1I GCGC 2 cut(s) 184, 216
HincII GTYRAC 1 cut(s) 691
HindII GTYRAC 1 cut(s) 691
HinfI GANTC 2 cut(s) 746, 1151
HpaI GTTAAC 1 cut(s) 691
HpaII CCGG 1 cut(s) 1473
HphI GGTGA 5 cut(s) 96, 149, 374, 596, 833
Hpy166II GTNNAC 2 cut(s) 691, 1408
Hpy188I TCNGA 3 cut(s) 128, 1284, 1491
Hpy188III TCNNGA 9 cut(s) 34, 257, 265, 565, 604, 743, 776, 962, 1148
Hpy8I GTNNAC 2 cut(s) 691, 1408
Hpy99I CGWCG 3 cut(s) 251, 1187, 1436
HpyAV CCTTC 7 cut(s) 35, 40, 111, 709, 812, 826, 1338
HpyCH4III ACNGT 4 cut(s) 362, 483, 958, 1134
HpyCH4IV ACGT 2 cut(s) 149, 1185
HpyCH4V TGCA 6 cut(s) 7, 400, 593, 1015, 1408, 1470
HpyF10VI GCNNNNNNNGC 4 cut(s) 202, 251, 795, 1021
HpyF3I CTNAG 3 cut(s) 180, 349, 468
HpySE526I ACGT 2 cut(s) 149, 1185
Hsp92II CATG 4 cut(s) 202, 268, 1375, 1462
HspAI GCGC 2 cut(s) 184, 216
Ksp22I TGATCA 1 cut(s) 1098
KspAI GTTAAC 1 cut(s) 691
Kzo9I GATC 9 cut(s) 161, 261, 302, 332, 546, 627, 835, 1098, 1358
LguI GCTCTTC 1 cut(s) 753
LmnI GCTCC 6 cut(s) 69, 120, 358, 1334, 1436, 1501
Lsp1109I GCAGC 5 cut(s) 238, 384, 412, 577, 1202
LweI GCATC 3 cut(s) 396, 912, 1000
MaeI CTAG 7 cut(s) 143, 455, 723, 948, 962, 1139, 1528
MaeII ACGT 2 cut(s) 149, 1185
MaeIII GTNAC 1 cut(s) 1134
MalI GATC 9 cut(s) 163, 263, 304, 334, 548, 629, 837, 1100, 1360
MboI GATC 9 cut(s) 161, 261, 302, 332, 546, 627, 835, 1098, 1358
MfeI CAATTG 3 cut(s) 309, 888, 1224
MflI RGATCY 3 cut(s) 332, 835, 1358
MhlI GDGCHC 3 cut(s) 74, 198, 1410
MlsI TGGCCA 1 cut(s) 1376
MluNI TGGCCA 1 cut(s) 1376
MlyI GAGTC 1 cut(s) 755
MmeI TCCRAC 1 cut(s) 984
Mox20I TGGCCA 1 cut(s) 1376
MroXI GAANNNNTTC 1 cut(s) 1313
MscI TGGCCA 1 cut(s) 1376
MseI TTAA 8 cut(s) 407, 512, 690, 986, 1088, 1266, 1322, 1454
MslI CAYNNNNRTG 2 cut(s) 392, 707
Msp20I TGGCCA 1 cut(s) 1376
MspCI CTTAAG 1 cut(s) 985
MspI CCGG 1 cut(s) 1473
MspR9I CCNGG 1 cut(s) 1356
MssI GTTTAAAC 1 cut(s) 1267
MunI CAATTG 3 cut(s) 309, 888, 1224
Mva1269I GAATGC 1 cut(s) 1472
MvaI CCWGG 1 cut(s) 1356
MvnI CGCG 2 cut(s) 218, 687
MwoI GCNNNNNNNGC 4 cut(s) 202, 251, 795, 1021
NcoI CCATGG 1 cut(s) 1371
NdeI CATATG 2 cut(s) 378, 765
NdeII GATC 9 cut(s) 161, 261, 302, 332, 546, 627, 835, 1098, 1358
NlaIII CATG 4 cut(s) 202, 268, 1375, 1462
NlaIV GGNNCC 2 cut(s) 116, 1360
NspV TTCGAA 1 cut(s) 1317
OliI CACNNNNGTG 1 cut(s) 707
PagI TCATGA 1 cut(s) 264
PciSI GCTCTTC 1 cut(s) 753
PcsI WCGNNNNNNNCGW 1 cut(s) 439
PctI GAATGC 1 cut(s) 1472
PdmI GAANNNNTTC 1 cut(s) 1313
PfeI GAWTC 1 cut(s) 1151
PinAI ACCGGT 1 cut(s) 1472
PkrI GCNGC 6 cut(s) 6, 253, 399, 402, 592, 1192
PleI GAGTC 1 cut(s) 754
PmeI GTTTAAAC 1 cut(s) 1267
PpsI GAGTC 1 cut(s) 754
Ppu21I YACGTR 1 cut(s) 150
PshBI ATTAAT 1 cut(s) 1322
Psp124BI GAGCTC 1 cut(s) 198
Psp6I CCWGG 1 cut(s) 1354
PspGI CCWGG 1 cut(s) 1354
PspN4I GGNNCC 2 cut(s) 116, 1360
PstI CTGCAG 1 cut(s) 402
PsuI RGATCY 3 cut(s) 332, 835, 1358
RsaI GTAC 2 cut(s) 152, 441
RsaNI GTAC 2 cut(s) 151, 440
RseI CAYNNNNRTG 2 cut(s) 392, 707
SacI GAGCTC 1 cut(s) 198
SapI GCTCTTC 1 cut(s) 753
SaqAI TTAA 8 cut(s) 407, 512, 690, 986, 1088, 1266, 1322, 1454
SatI GCNGC 6 cut(s) 5, 252, 398, 401, 591, 1191
Sau3AI GATC 9 cut(s) 161, 261, 302, 332, 546, 627, 835, 1098, 1358
SchI GAGTC 1 cut(s) 755
ScrFI CCNGG 1 cut(s) 1356
SduI GDGCHC 3 cut(s) 74, 198, 1410
SfaNI GCATC 3 cut(s) 396, 912, 1000
SfcI CTRYAG 2 cut(s) 398, 750
SfuI TTCGAA 1 cut(s) 1317
SmiMI CAYNNNNRTG 2 cut(s) 392, 707
SmlI CTYRAG 3 cut(s) 614, 985, 1158
SmoI CTYRAG 3 cut(s) 614, 985, 1158
SpeI ACTAGT 1 cut(s) 1138
SsiI CCGC 3 cut(s) 107, 798, 936
SspMI CTAG 7 cut(s) 143, 455, 723, 948, 962, 1139, 1528
SstI GAGCTC 1 cut(s) 198
StyD4I CCNGG 1 cut(s) 1354
StyI CCWWGG 3 cut(s) 110, 1371, 1520
TaaI ACNGT 4 cut(s) 362, 483, 958, 1134
TaiI ACGT 2 cut(s) 152, 1188
TaqI TCGA 4 cut(s) 433, 809, 855, 1317
TaqII GACCGA 1 cut(s) 992
TfiI GAWTC 1 cut(s) 1151
Tru1I TTAA 8 cut(s) 407, 512, 690, 986, 1088, 1266, 1322, 1454
Tru9I TTAA 8 cut(s) 407, 512, 690, 986, 1088, 1266, 1322, 1454
TscAI CASTG 2 cut(s) 90, 1299
TseI GCWGC 6 cut(s) 4, 251, 397, 400, 590, 1190
TspDTI ATGAA 5 cut(s) 40, 197, 228, 281, 1266
TspGWI ACGGA 2 cut(s) 345, 1449
TspRI CASTG 2 cut(s) 90, 1299
Vha464I CTTAAG 1 cut(s) 985
VneI GTGCAC 1 cut(s) 1406
VspI ATTAAT 1 cut(s) 1322
XapI RAATTY 4 cut(s) 508, 858, 1285, 1412
XbaI TCTAGA 1 cut(s) 961
XcmI CCANNNNNNNNNTGG 1 cut(s) 672
XmnI GAANNNNTTC 1 cut(s) 1313
XspI CTAG 7 cut(s) 143, 455, 723, 948, 962, 1139, 1528
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.