Rorug03G0196900

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
Physical Location & Seq
Reverse (-)
17294195 .. 17295544
1350 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0196900.1

Sequence Viewer

Length: 1350 bp
ATGGCGACGCCATATCATTCGCTTTCCACCTTTGCAACTTCGATTGTTATTATCTCTCTCTTAGTTATCTCTCACGCACAAGATAATGTCCCTCACCATGGCGATGTAATTAGCCTCAACATGATCCATCGTGACACACCATCTTCTCCCTTATACAATTCGTCGTTAACTAAATGGCAACGAGTAAGCAATGCCTTGCGACGTTCACGTGATCGCATCAACCGTTTCATCTCATCAGAAGATGGATCGCCTGATCATCTAATCTATAGCCAAGGAGAGTACCTGGTGAACATATCAATAGGTACACCACCAAGAACTTTCATTGGAATTGCTGACACCGGAAGCGATCTTATATGGACACAATGCATGCCATGCAGGGAATGTTTCGAGCAAAACCCTCCTCTCTTCGATCCAGCTTATTCATCAACTTATAGAGAGCTCTCTTGTATGTCCGACGAATGTAATCTGCTAAGCGGAGCCGCCTCTTGTTCCAGTAATTCAAGCTCTTGTGACTATCAATATTCATATGGTGACGGGTCTCATACCACAGGAAATCTATCCCTGGACACTGTTACTTTGGATTCCACATCCATTCCCACTATATTTGGTTGCGGACACCATAATGGAGGAGTGTTCAGTGGGATCGAGTCAGGAATTGTTGGATTAGGCCGCGGAGCTGTGTCGTTTATCTCCCAAATAGGGGCTTATTTGGTTGGCGGGAAATATTTCTCTCATTGCTTGGTTCCTAATCCTACAATGTCTTTCCTGTCTAATAACTCTAATCCAATCTCCTCAAGCAAGATGTATTTTGGTCGACTTAATACTTCATCAGGTCCTGAAGTGGTCACCACCCCTTTGCTTTCGACAGGTGATAGCGCCACTCAGACCTTTTATTACCTTGAGCTTCAAGGCATTAGTGTTGGAGCCAACAATATCACACTTGATGCAGATGCCAAGGCCTTTAAGGGTAACATGATCATAGACTCAGGGACTACCTTAACGTACTTACCGGAGTTGCTTTATGACAGGTTCAAATCAGCAATTAGAGAGGCACTTAAAGATCGATATCTGGAGGTGAAGCAAGATCCGACTGGTTCTGGACTTTGTTTCTTGACTAAATATGATATTCTTCCTGGCCCCAATGTCACTCTCCATTTTAATGGTGCAGATGTGAAGCTAAAATCTACCAACACTTTTATTAGGATGGATGATGAGACTGTTTGCTTAGCATTCTCCCCAAGTAGCGGTGTCGGAATCTATGGCAATTGGGCACAGATAAACTACTTGGTAGGATATGACCTAGATAACAAGACTGTCTCCTTCCAGCCAACTGATTGTACAACTAGCTAG

Protein Analysis

449

Amino Acids

48.78

Weight (kDa)

5.22

Isoelectric Point (pI)

38.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Asp PF00026 93 - 442 2.2e-25 Eukaryotic aspartyl protease
TAXi_N PF14543 94 - 252 1e-47 Xylanase inhibitor N-terminal
TAXi_C PF14541 298 - 442 1.2e-24 Xylanase inhibitor C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000061)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G48270 AT3G48280 AT3G48290 AT3G48290 AT3G48300 AT3G48300 AT3G48310 AT3G48320 AT4G20235 AT4G20235
fragaria_vesca FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g36190 FvH4_3g14160 FvH4_3g14210 FvH4_3g14260 FvH4_3g14260 FvH4_3g21100 FvH4_3g21380 FvH4_4g24460 FvH4_4g24500 FvH4_5g06571 FvH4_5g06571 FvH4_5g06571 FvH4_5g06571 FvH4_5g06572 FvH4_5g06573 FvH4_5g06574 FvH4_5g06575 FvH4_5g06576 FvH4_5g06577 FvH4_5g06577 FvH4_5g07540 FvH4_5g07550 FvH4_5g07560 FvH4_5g07570 FvH4_5g29491 FvH4_5g29492 FvH4_6g23870 FvH4_6g23880 FvH4_6g26870 FvH4_7g11861 FvH4_7g11862 FvH4_7g13050 FvH4_7g13060 FvH4_7g13080 FvH4_7g13080 FvH4_7g22630 FvH4_7g22650 FvH4_7g22651 FvH4_7g23020
malus_domestica MD03G1207400.v1.1 MD03G1214800.v1.1 MD03G1218500.v1.1 MD06G1163100.v1.1 MD06G1163300.v1.1 MD06G1163400.v1.1 MD06G1163500.v1.1 MD06G1163600.v1.1 MD06G1163800.v1.1 MD06G1164000.v1.1 MD06G1164100.v1.1 MD06G1224400.v1.1 MD08G1222800.v1.1 MD08G1222900.v1.1 MD08G1223100.v1.1 MD11G1091500.v1.1 MD11G1091800.v1.1 MD14G1163200.v1.1 MD14G1169000.v1.1 MD15G1207200.v1.1 MD15G1207300.v1.1 MD17G1259400.v1.1
prunus_persica Prupe.4G198100_v2.0.a1 Prupe.4G199100_v2.0.a1 Prupe.4G199400_v2.0.a1 Prupe.4G199800_v2.0.a1 Prupe.4G225200_v2.0.a1 Prupe.4G239100_v2.0.a1 Prupe.5G156600_v2.0.a1 Prupe.5G163500_v2.0.a1 Prupe.7G209500_v2.0.a1 Prupe.I003400_v2.0.a1
pyrus_communis pycom03g16340 pycom06g14600 pycom06g14610 pycom06g14620 pycom06g14630 pycom06g14640 pycom06g14670 pycom06g14690 pycom08g19390 pycom08g19400 pycom08g19410 pycom11g07600 pycom11g07610 pycom11g07620 pycom11g07660 pycom14g13580 pycom14g14080 pycom14g14100 pycom14g14110 pycom15g18380 pycom17g26080
rosa_chinensis RchiOBHm_Chr1g0339441 RchiOBHm_Chr1g0339451 RchiOBHm_Chr1g0352191 RchiOBHm_Chr1g0368221 RchiOBHm_Chr2g0129531 RchiOBHm_Chr2g0129541 RchiOBHm_Chr3g0477631 RchiOBHm_Chr3g0482551 RchiOBHm_Chr3g0482561 RchiOBHm_Chr3g0482571 RchiOBHm_Chr4g0411601 RchiOBHm_Chr4g0422181 RchiOBHm_Chr5g0036661 RchiOBHm_Chr5g0036731 RchiOBHm_Chr6g0274021 RchiOBHm_Chr7g0190921 RchiOBHm_Chr7g0190931 RchiOBHm_Chr7g0190941 RchiOBHm_Chr7g0190951 RchiOBHm_Chr7g0190961 RchiOBHm_Chr7g0190971 RchiOBHm_Chr7g0191001 RchiOBHm_Chr7g0191011 RchiOBHm_Chr7g0191021 RchiOBHm_Chr7g0192181 RchiOBHm_Chr7g0192191 RchiOBHm_Chr7g0192201 RchiOBHm_Chr7g0192221 RchiOBHm_Chr7g0192231 RchiOBHm_Chr7g0192281 RchiOBHm_Chr7g0197311
rosa_laevigata RLG00000003942 RLG00000004345 RLG00000004379 RLG00000004383 RLG00000004384 RLG00000004385 RLG00000004387 RLG00000004388 RLG00000004389 RLG00000004480 RLG00000004481 RLG00000004482 RLG00000004483 RLG00000004485 RLG00000008342 RLG00000008401 RLG00000013583 RLG00000017044 RLG00000027229 RLG00000028349 RLG00000028350 RLG00000028353 RLG00000028820 RLG00000033707 RLG00000033710
rosa_multiflora Rmu_co8020340.1_g000001 Rmu_co8096640.1_g000001 Rmu_co8214930.1_g000001 Rmu_co8223272.1_g000001 Rmu_co8282535.1_g000001 Rmu_co8343567.1_g000001 Rmu_co8404191.1_g000001 Rmu_co8455157.1_g000001 Rmu_sc0000062.1_g000028 Rmu_sc0000082.1_g000091 Rmu_sc0000509.1_g000017 Rmu_sc0000775.1_g000001 Rmu_sc0000999.1_g000034 Rmu_sc0001559.1_g000004 Rmu_sc0001559.1_g000009 Rmu_sc0002164.1_g000001 Rmu_sc0002164.1_g000005 Rmu_sc0002164.1_g000007 Rmu_sc0002164.1_g000008 Rmu_sc0002164.1_g000009 Rmu_sc0002164.1_g000019 Rmu_sc0002247.1_g000009 Rmu_sc0002373.1_g000002 Rmu_sc0002373.1_g000003 Rmu_sc0002944.1_g000059 Rmu_sc0003930.1_g000004 Rmu_sc0004958.1_g000001 Rmu_sc0005197.1_g000014 Rmu_sc0005898.1_g000008 Rmu_sc0005898.1_g000009 Rmu_sc0005898.1_g000015 Rmu_sc0006059.1_g000004 Rmu_sc0006059.1_g000010 Rmu_sc0006903.1_g000007 Rmu_sc0006903.1_g000008 Rmu_sc0006968.1_g000001 Rmu_sc0011009.1_g000009 Rmu_sc0022852.1_g000002 Rmu_sc0033854.1_g000001 Rmu_ssc0000421.1_g000057 Rmu_ssc0000421.1_g000067 Rmu_ssc0000421.1_g000069 Rmu_ssc0000421.1_g000072 Rmu_ssc0000421.1_g000081 Rmu_ssc0000421.1_g000086
rosa_roxburghii Rroxscaffold_158G00443680 Rroxscaffold_158G00443710 Rroxscaffold_158G00443720 Rroxscaffold_158G00443740 Rroxscaffold_1G00034950 Rroxscaffold_1G00044240 Rroxscaffold_1G00044270 Rroxscaffold_3G00241380 Rroxscaffold_3G00247000 Rroxscaffold_3G00263120 Rroxscaffold_3G00263150 Rroxscaffold_3G00263160 Rroxscaffold_3G00263170 Rroxscaffold_3G00263180 Rroxscaffold_3G00263190 Rroxscaffold_3G00263210 Rroxscaffold_3G00263230 Rroxscaffold_3G00263260 Rroxscaffold_3G00264110 Rroxscaffold_3G00264130 Rroxscaffold_3G00264160 Rroxscaffold_3G00264180 Rroxscaffold_3G00264200 Rroxscaffold_4G00288750 Rroxscaffold_4G00303110 Rroxscaffold_4G00303120 Rroxscaffold_4G00322280 Rroxscaffold_5G00356200 Rroxscaffold_6G00399150 Rroxscaffold_6G00399290 Rroxscaffold_7G00194770
rosa_rugosa Rorug01G0225300 Rorug01G0225400 Rorug01G0225800 Rorug01G0226000 Rorug01G0339400 Rorug01G0451500 Rorug03G0196900 Rorug03G0294900 Rorug04G0107500 Rorug04G0107600 Rorug04G0129700 Rorug04G0178000 Rorug05G0144900.1 Rorug05G0145000 Rorug05G0228000 Rorug05G0228600 Rorug06G0078300 Rorug06G0508000 Rorug06G0508100 Rorug06G0508100 Rorug06G0508400 Rorug06G0513400 Rorug07G0000100 Rorug07G0000200 Rorug07G0000300 Rorug07G0000500 Rorug07G0000800
rosa_samantha Rh1BG060400 Rh1BG210300 Rh1BG210700 Rh1BG210800 Rh1BG309800 Rh1CG223800 Rh1CG224200 Rh1CG325200 Rh1DG237000 Rh1DG237400 Rh1DG341600 Rh2DG365700 Rh3AG212500 Rh3AG248400 Rh3CG239800 Rh3DG239300 Rh4AG169300 Rh4BG166200 Rh4BG240500 Rh4BG240600 Rh4DG163600 Rh5AG249600 Rh5AG249900 Rh5AG250000 Rh5CG283100 Rh5CG283200 Rh5CG283400 Rh5DG259200 Rh5DG259800 Rh6BG197700 Rh6CG197800 Rh6DG189400 Rh7AG114900 Rh7AG115000 Rh7AG115200 Rh7AG115300 Rh7AG115400 Rh7AG115500 Rh7AG123900 Rh7AG124100 Rh7AG124300 Rh7BG117200 Rh7BG117400 Rh7BG118400 Rh7BG125400 Rh7BG125600 Rh7BG125700 Rh7BG125800 Rh7BG125900 Rh7BG126000 Rh7BG126400 Rh7BG126600 Rh7BG126700 Rh7BG166200 Rh7DG118600 Rh7DG118700 Rh7DG118900 Rh7DG119000 Rh7DG119100 Rh7DG127400 Rh7DG127600 Rh7DG127700 Rh7DG127900 Rh7DG128200
rosa_wichuraiana Rw1G013270 Rw1G020790 Rw2G027890 Rw2G028040 Rw3G019240 Rw4G014070 Rw4G020540 Rw5G021320 Rw5G022970 Rw6G016920 Rw7G010020 Rw7G010040 Rw7G010580 Rw7G010590 Rw7G010600 Rw7G010610 Rw7G010620 Rw7G010630 Rw7G010640 Rw7G010690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 814
AccII CGCG 1 cut(s) 672
AciI CCGC 7 cut(s) 474, 480, 612, 670, 672, 717, 1245
AclWI GGATC 5 cut(s) 118, 253, 404, 650, 1079
AcuI CTGAAG 1 cut(s) 858
AcvI CACGTG 1 cut(s) 209
AcyI GRCGYC 1 cut(s) 8
AfaI GTAC 4 cut(s) 281, 304, 1004, 1339
AfiI CCNNNNNNNGG 4 cut(s) 98, 699, 700, 1244
AgsI TTSAA 3 cut(s) 501, 908, 1033
AjnI CCWGG 3 cut(s) 282, 561, 1132
AluBI AGCT 7 cut(s) 416, 439, 504, 677, 904, 1177, 1347
AluI AGCT 7 cut(s) 416, 439, 504, 677, 904, 1177, 1347
Alw21I GWGCWC 1 cut(s) 441
Alw26I GTCTC 3 cut(s) 543, 1208, 1321
AlwI GGATC 5 cut(s) 118, 253, 404, 650, 1079
AlwNI CAGNNNCTG 1 cut(s) 836
AoxI GGCC 3 cut(s) 667, 957, 1135
Asp700I GAANNNNTTC 1 cut(s) 725
AspLEI GCGC 1 cut(s) 878
AspS9I GGNCC 2 cut(s) 833, 1136
AsuHPI GGTGA 6 cut(s) 86, 298, 542, 838, 881, 1087
AvaII GGWCC 1 cut(s) 833
BaeGI GKGCMC 1 cut(s) 1273
BanII GRGCYC 1 cut(s) 441
BbrPI CACGTG 1 cut(s) 209
Bbv12I GWGCWC 1 cut(s) 441
BccI CCATC 4 cut(s) 135, 148, 236, 1198
BciT130I CCWGG 3 cut(s) 284, 563, 1134
BclI TGATCA 2 cut(s) 253, 975
BcoDI GTCTC 3 cut(s) 543, 1208, 1321
BfaI CTAG 3 cut(s) 1301, 1344, 1348
BfmI CTRYAG 1 cut(s) 265
BfoI RGCGCY 1 cut(s) 879
BisI GCNGC 2 cut(s) 480, 670
BlpI GCTNAGC 2 cut(s) 470, 1225
BlsI GCNGC 2 cut(s) 481, 671
Bme1390I CCNGG 3 cut(s) 284, 563, 1134
Bme18I GGWCC 1 cut(s) 833
BmgT120I GGNCC 2 cut(s) 833, 1136
BmiI GGNNCC 4 cut(s) 478, 744, 925, 1138
BmrFI CCNGG 3 cut(s) 284, 563, 1134
BmsI GCATC 3 cut(s) 225, 934, 940
BpmI CTGGAG 1 cut(s) 1091
Bpu1102I GCTNAGC 2 cut(s) 470, 1225
BpuEI CTTGAG 2 cut(s) 778, 920
Bsa29I ATCGAT 1 cut(s) 1063
BsaAI YACGTR 1 cut(s) 209
BsaBI GATNNNNATC 1 cut(s) 1065
BsaHI GRCGYC 1 cut(s) 8
BsaI GGTCTC 1 cut(s) 543
BsaJI CCNNGG 5 cut(s) 97, 271, 561, 670, 954
BsaWI WCCGGW 2 cut(s) 338, 1009
Bsc4I CCNNNNNNNGG 4 cut(s) 98, 699, 700, 1244
Bse1I ACTGG 2 cut(s) 492, 1096
Bse3DI GCAATG 2 cut(s) 196, 733
Bse8I GATNNNNATC 1 cut(s) 1065
BseBI CCWGG 3 cut(s) 284, 563, 1134
BseCI ATCGAT 1 cut(s) 1063
BseDI CCNNGG 5 cut(s) 97, 271, 561, 670, 954
BseGI GGATG 3 cut(s) 587, 1209, 1213
BseJI GATNNNNATC 1 cut(s) 1065
BseLI CCNNNNNNNGG 4 cut(s) 98, 699, 700, 1244
BseMI GCAATG 2 cut(s) 196, 733
BseMII CTCAG 2 cut(s) 896, 999
BseNI ACTGG 2 cut(s) 492, 1096
BseRI GAGGAG 3 cut(s) 390, 642, 781
BseSI GKGCMC 1 cut(s) 1273
BsgI GTGCAG 1 cut(s) 1185
Bsh1236I CGCG 1 cut(s) 672
BshFI GGCC 3 cut(s) 669, 959, 1137
BshVI ATCGAT 1 cut(s) 1063
BsiHKAI GWGCWC 1 cut(s) 441
BsiSI CCGG 2 cut(s) 339, 1010
BslFI GGGAC 2 cut(s) 74, 1003
BslI CCNNNNNNNGG 4 cut(s) 98, 699, 700, 1244
BsmAI GTCTC 3 cut(s) 543, 1208, 1321
BsmFI GGGAC 2 cut(s) 74, 1003
BsmI GAATGC 1 cut(s) 1229
BsnI GGCC 3 cut(s) 669, 959, 1137
Bso31I GGTCTC 1 cut(s) 543
Bsp1286I GDGCHC 2 cut(s) 441, 1273
Bsp1407I TGTACA 1 cut(s) 1337
Bsp1720I GCTNAGC 2 cut(s) 470, 1225
Bsp19I CCATGG 1 cut(s) 97
BspACI CCGC 7 cut(s) 474, 480, 612, 670, 672, 717, 1245
BspANI GGCC 3 cut(s) 669, 959, 1137
BspCNI CTCAG 2 cut(s) 895, 998
BspDI ATCGAT 1 cut(s) 1063
BspFNI CGCG 1 cut(s) 672
BspLI GGNNCC 4 cut(s) 478, 744, 925, 1138
BspPI GGATC 5 cut(s) 118, 253, 404, 650, 1079
BspTNI GGTCTC 1 cut(s) 543
BsrDI GCAATG 2 cut(s) 196, 733
BsrGI TGTACA 1 cut(s) 1337
BsrI ACTGG 2 cut(s) 492, 1096
BssECI CCNNGG 5 cut(s) 97, 271, 561, 670, 954
BssNI GRCGYC 1 cut(s) 8
BssT1I CCWWGG 3 cut(s) 97, 271, 954
Bst2UI CCWGG 3 cut(s) 284, 563, 1134
Bst4CI ACNGT 4 cut(s) 224, 571, 1219, 1315
Bst6I CTCTTC 1 cut(s) 410
BstACI GRCGYC 1 cut(s) 8
BstAPI GCANNNNNTGC 1 cut(s) 372
BstAUI TGTACA 1 cut(s) 1337
BstBAI YACGTR 1 cut(s) 209
BstC8I GCNNGC 1 cut(s) 368
BstDEI CTNAG 5 cut(s) 61, 470, 882, 985, 1225
BstDSI CCRYGG 2 cut(s) 97, 670
BstEII GGTNACC 1 cut(s) 844
BstF5I GGATG 3 cut(s) 587, 1209, 1213
BstFNI CGCG 1 cut(s) 672
BstH2I RGCGCY 1 cut(s) 879
BstHHI GCGC 1 cut(s) 878
BstMAI GTCTC 3 cut(s) 543, 1208, 1321
BstMWI GCNNNNNNNGC 1 cut(s) 372
BstNI CCWGG 3 cut(s) 284, 563, 1134
BstNSI RCATGY 1 cut(s) 370
BstPI GGTNACC 1 cut(s) 844
BstSCI CCNGG 3 cut(s) 282, 561, 1132
BstSFI CTRYAG 1 cut(s) 265
BstSLI GKGCMC 1 cut(s) 1273
BstUI CGCG 1 cut(s) 672
BstX2I RGATCY 1 cut(s) 1084
BstXI CCANNNNNNTGG 1 cut(s) 1160
BstYI RGATCY 1 cut(s) 1084
Bsu15I ATCGAT 1 cut(s) 1063
BsuRI GGCC 3 cut(s) 669, 959, 1137
BsuTUI ATCGAT 1 cut(s) 1063
BtgI CCRYGG 2 cut(s) 97, 670
BtgZI GCGATG 1 cut(s) 117
BtsCI GGATG 3 cut(s) 587, 1209, 1213
BtsIMutI CAGTG 2 cut(s) 567, 643
Cac8I GCNNGC 1 cut(s) 368
CaiI CAGNNNCTG 1 cut(s) 836
CfoI GCGC 1 cut(s) 878
Cfr13I GGNCC 2 cut(s) 833, 1136
Cfr42I CCGCGG 1 cut(s) 673
ClaI ATCGAT 1 cut(s) 1063
CseI GACGC 1 cut(s) 16
CsiI ACCWGGT 1 cut(s) 282
Csp6I GTAC 4 cut(s) 280, 303, 1003, 1338
CspCI CAANNNNNGTGG 2 cut(s) 586, 621
CviAII CATG 5 cut(s) 98, 121, 367, 372, 973
CviQI GTAC 4 cut(s) 280, 303, 1003, 1338
DdeI CTNAG 5 cut(s) 61, 470, 882, 985, 1225
Eam1104I CTCTTC 1 cut(s) 410
EarI CTCTTC 1 cut(s) 410
Ecl136II GAGCTC 1 cut(s) 439
Eco130I CCWWGG 3 cut(s) 97, 271, 954
Eco147I AGGCCT 1 cut(s) 959
Eco24I GRGCYC 1 cut(s) 441
Eco31I GGTCTC 1 cut(s) 543
Eco32I GATATC 1 cut(s) 1067
Eco47I GGWCC 1 cut(s) 833
Eco53kI GAGCTC 1 cut(s) 439
Eco57I CTGAAG 1 cut(s) 858
Eco72I CACGTG 1 cut(s) 209
Eco91I GGTNACC 1 cut(s) 844
EcoICRI GAGCTC 1 cut(s) 439
EcoO109I RGGNCCY 1 cut(s) 833
EcoO65I GGTNACC 1 cut(s) 844
EcoRII CCWGG 3 cut(s) 282, 561, 1132
EcoRV GATATC 1 cut(s) 1067
EcoT14I CCWWGG 3 cut(s) 97, 271, 954
EcoT22I ATGCAT 1 cut(s) 368
EcoT38I GRGCYC 1 cut(s) 441
ErhI CCWWGG 3 cut(s) 97, 271, 954
FaeI CATG 5 cut(s) 101, 124, 370, 375, 976
FaqI GGGAC 2 cut(s) 74, 1003
FatI CATG 5 cut(s) 97, 120, 366, 371, 972
FauI CCCGC 1 cut(s) 710
FauNDI CATATG 1 cut(s) 526
FbaI TGATCA 2 cut(s) 253, 975
FblI GTMKAC 1 cut(s) 814
Fnu4HI GCNGC 2 cut(s) 480, 670
FokI GGATG 3 cut(s) 574, 1216, 1220
FriOI GRGCYC 1 cut(s) 441
Fsp4HI GCNGC 2 cut(s) 480, 670
FspBI CTAG 3 cut(s) 1301, 1344, 1348
GlaI GCGC 1 cut(s) 877
GluI GCNGC 2 cut(s) 480, 670
GsuI CTGGAG 1 cut(s) 1091
HaeII RGCGCY 1 cut(s) 879
HaeIII GGCC 3 cut(s) 669, 959, 1137
HapII CCGG 2 cut(s) 339, 1010
HgaI GACGC 1 cut(s) 16
HhaI GCGC 1 cut(s) 878
Hin1I GRCGYC 1 cut(s) 8
Hin1II CATG 5 cut(s) 101, 124, 370, 375, 976
Hin6I GCGC 1 cut(s) 876
HinP1I GCGC 1 cut(s) 876
HincII GTYRAC 2 cut(s) 168, 815
HindII GTYRAC 2 cut(s) 168, 815
HinfI GANTC 4 cut(s) 581, 647, 983, 1254
HpaI GTTAAC 1 cut(s) 168
HpaII CCGG 2 cut(s) 339, 1010
HphI GGTGA 6 cut(s) 86, 298, 542, 838, 881, 1087
Hpy166II GTNNAC 5 cut(s) 168, 206, 289, 305, 815
Hpy188I TCNGA 5 cut(s) 238, 454, 885, 1089, 1253
Hpy188III TCNNGA 6 cut(s) 131, 651, 836, 1070, 1098, 1111
Hpy8I GTNNAC 5 cut(s) 168, 206, 289, 305, 815
Hpy99I CGWCG 4 cut(s) 10, 166, 204, 458
HpyAV CCTTC 1 cut(s) 1330
HpyCH4III ACNGT 4 cut(s) 224, 571, 1219, 1315
HpyCH4IV ACGT 3 cut(s) 202, 208, 1001
HpyCH4V TGCA 5 cut(s) 35, 366, 375, 947, 1166
HpyF10VI GCNNNNNNNGC 1 cut(s) 372
HpyF3I CTNAG 5 cut(s) 61, 470, 882, 985, 1225
HpySE526I ACGT 3 cut(s) 202, 208, 1001
Hsp92I GRCGYC 1 cut(s) 8
Hsp92II CATG 5 cut(s) 101, 124, 370, 375, 976
HspAI GCGC 1 cut(s) 876
Ksp22I TGATCA 2 cut(s) 253, 975
KspAI GTTAAC 1 cut(s) 168
KspI CCGCGG 1 cut(s) 673
LmnI GCTCC 3 cut(s) 476, 674, 923
LweI GCATC 3 cut(s) 225, 934, 940
MabI ACCWGGT 1 cut(s) 282
MaeI CTAG 3 cut(s) 1301, 1344, 1348
MaeII ACGT 3 cut(s) 202, 208, 1001
MaeIII GTNAC 7 cut(s) 131, 509, 530, 571, 844, 968, 1144
MboII GAAGA 4 cut(s) 135, 251, 397, 1121
MfeI CAATTG 1 cut(s) 1264
MflI RGATCY 1 cut(s) 1084
MhlI GDGCHC 2 cut(s) 441, 1273
MluCI AATT 7 cut(s) 108, 157, 327, 496, 654, 1041, 1264
MlyI GAGTC 2 cut(s) 656, 977
MmeI TCCRAC 5 cut(s) 477, 640, 901, 1112, 1231
MnlI CCTC 9 cut(s) 102, 125, 408, 411, 493, 620, 802, 1042, 1066
Mph1103I ATGCAT 1 cut(s) 368
MroXI GAANNNNTTC 1 cut(s) 725
MseI TTAA 6 cut(s) 167, 819, 963, 998, 1056, 1158
MslI CAYNNNNRTG 3 cut(s) 102, 621, 1158
MspA1I CMGCKG 1 cut(s) 672
MspI CCGG 2 cut(s) 339, 1010
MspR9I CCNGG 3 cut(s) 284, 563, 1134
MunI CAATTG 1 cut(s) 1264
Mva1269I GAATGC 1 cut(s) 1229
MvaI CCWGG 3 cut(s) 284, 563, 1134
MvnI CGCG 1 cut(s) 672
MwoI GCNNNNNNNGC 1 cut(s) 372
NcoI CCATGG 1 cut(s) 97
NdeI CATATG 1 cut(s) 526
NlaIII CATG 5 cut(s) 101, 124, 370, 375, 976
NlaIV GGNNCC 4 cut(s) 478, 744, 925, 1138
NmuCI GTSAC 5 cut(s) 131, 509, 530, 844, 1144
NsiI ATGCAT 1 cut(s) 368
NspI RCATGY 1 cut(s) 370
PaeI GCATGC 1 cut(s) 370
PceI AGGCCT 1 cut(s) 959
PcsI WCGNNNNNNNCGW 1 cut(s) 220
PctI GAATGC 1 cut(s) 1229
PdmI GAANNNNTTC 1 cut(s) 725
PfeI GAWTC 2 cut(s) 581, 1254
PkrI GCNGC 2 cut(s) 481, 671
PleI GAGTC 2 cut(s) 655, 977
PmaCI CACGTG 1 cut(s) 209
PmlI CACGTG 1 cut(s) 209
PpsI GAGTC 2 cut(s) 655, 977
Ppu21I YACGTR 1 cut(s) 209
PpuMI RGGWCCY 1 cut(s) 833
Psp124BI GAGCTC 1 cut(s) 441
Psp5II RGGWCCY 1 cut(s) 833
Psp6I CCWGG 3 cut(s) 282, 561, 1132
PspCI CACGTG 1 cut(s) 209
PspEI GGTNACC 1 cut(s) 844
PspGI CCWGG 3 cut(s) 282, 561, 1132
PspN4I GGNNCC 4 cut(s) 478, 744, 925, 1138
PspPI GGNCC 2 cut(s) 833, 1136
PspPPI RGGWCCY 1 cut(s) 833
PstNI CAGNNNCTG 1 cut(s) 836
PsuI RGATCY 1 cut(s) 1084
RsaI GTAC 4 cut(s) 281, 304, 1004, 1339
RsaNI GTAC 4 cut(s) 280, 303, 1003, 1338
RseI CAYNNNNRTG 3 cut(s) 102, 621, 1158
SacI GAGCTC 1 cut(s) 441
SacII CCGCGG 1 cut(s) 673
SalI GTCGAC 1 cut(s) 813
SaqAI TTAA 6 cut(s) 167, 819, 963, 998, 1056, 1158
SatI GCNGC 2 cut(s) 480, 670
Sau96I GGNCC 2 cut(s) 833, 1136
SchI GAGTC 2 cut(s) 656, 977
ScrFI CCNGG 3 cut(s) 284, 563, 1134
SduI GDGCHC 2 cut(s) 441, 1273
SexAI ACCWGGT 1 cut(s) 282
SfaNI GCATC 3 cut(s) 225, 934, 940
SfcI CTRYAG 1 cut(s) 265
Sfr303I CCGCGG 1 cut(s) 673
SgrBI CCGCGG 1 cut(s) 673
SinI GGWCC 1 cut(s) 833
SmiMI CAYNNNNRTG 3 cut(s) 102, 621, 1158
SmlI CTYRAG 2 cut(s) 793, 899
SmoI CTYRAG 2 cut(s) 793, 899
SphI GCATGC 1 cut(s) 370
Sse9I AATT 7 cut(s) 108, 157, 327, 496, 654, 1041, 1264
SseBI AGGCCT 1 cut(s) 959
SsiI CCGC 7 cut(s) 474, 480, 612, 670, 672, 717, 1245
SspI AATATT 2 cut(s) 521, 725
SspMI CTAG 3 cut(s) 1301, 1344, 1348
SstI GAGCTC 1 cut(s) 441
StuI AGGCCT 1 cut(s) 959
StyD4I CCNGG 3 cut(s) 282, 561, 1132
StyI CCWWGG 3 cut(s) 97, 271, 954
TaaI ACNGT 4 cut(s) 224, 571, 1219, 1315
TaiI ACGT 3 cut(s) 205, 211, 1004
TaqI TCGA 7 cut(s) 41, 387, 408, 645, 814, 863, 1063
TasI AATT 7 cut(s) 108, 157, 327, 496, 654, 1041, 1264
TatI WGTACW 1 cut(s) 1337
TauI GCSGC 2 cut(s) 482, 672
TfiI GAWTC 2 cut(s) 581, 1254
Tru1I TTAA 6 cut(s) 167, 819, 963, 998, 1056, 1158
Tru9I TTAA 6 cut(s) 167, 819, 963, 998, 1056, 1158
TscAI CASTG 2 cut(s) 574, 643
TseFI GTSAC 5 cut(s) 131, 509, 530, 844, 1144
Tsp45I GTSAC 5 cut(s) 131, 509, 530, 844, 1144
TspDTI ATGAA 5 cut(s) 217, 310, 411, 513, 816
TspRI CASTG 2 cut(s) 574, 643
VpaK11BI GGWCC 1 cut(s) 833
XceI RCATGY 1 cut(s) 370
XmiI GTMKAC 1 cut(s) 814
XmnI GAANNNNTTC 1 cut(s) 725
XspI CTAG 3 cut(s) 1301, 1344, 1348
Zsp2I ATGCAT 1 cut(s) 368
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.