Rmu_sc0002164.1_g000009

Cytochrome p450

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002164.1
OG0000061
Physical Location & Seq
Forward (+)
33619 .. 40019
6401 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002164.1_g000009.1.cds

Sequence Viewer

Length: 3102 bp
atgctcctccactttggaagcgtccccgtccttattgtctcttcggctgagggagcccgcgaaatcatgaaaacccatgacctcactttctccaacagacccaagacggtcatctttgagaagctgctctacaatttcagagacgtagcgtcggcgccttatggtgagtactggagacagatgaagagtatatgtgttttgaatcttctgagcaacaaaagggttcgctcttttcgctctgttagagaagaggaaacaaaatcgatgatcgacaagataaaggaagcatcatcaacatcatcggttttgaacttaagtgaaatgtttgctacgatgactaatgatgtcatcagtagagttgctctgggtaggaagtatagtagtactgatggggaaggtctgagagagcttttgggggagtttcaggagttattgggacgcatcaacgttggggattttatcccatgccttgcttggctgaaccgtgagaatgctttggaggctaaattggacaaggtggctacacggtttgatgagtttttggagagagtgattcaagagcatgcagatagttccgagagtagaaataatgatggccatgctcatattgagaatgagaaccaaaaggattttgtggacattttacttgaaattcagaaaggaaattcacttggttttcccctcgaaagagttagcataaaggcacttatcttggatatgtttgctgccggaactgataccacatattcattccttgaatgggcaatgagtgagcttttaaggcatccgatggtcatgaacaaactgcagaaagagattcgaggaatagtcagagacaagaaagacataacggaggatgatttgactggactgcactatttaaaggcagtgattaaggagacttttcgcttgcaccctccagttccattactagtgcctaggttatcaacccacgaagtgaaaataaatggttatagtattaaagccaacacacaagttctagtgaatgcatggcacattggaagagatcccgagtcatacagcaatccagaggagtttgagccagaaaggttcttgattcacgacgatatagattacaaaggaaatgatttccaacttattccatttggagctggtagaaggatctgcccaggtattcaatttgccactgctgttaatgagattgccttggcaaacatattgcacaagttcaattgggaattgccaaatggaacaaatggcgaagatttggacatgacggaatttactggtataaccatgcgtaggaaatatcctcttaaagtcgttgctgttccatttgattgtataaccggatacttcacagtcagagcagactcacagatttgtaacctggatagaaagaaggagataatgaatctgctcgaaatattgctggatctaaatgaaaccttctccctagcgcttgttgccattttcctcattctcgtatacagatggtctttcactactctttcaaagaactcaccaccttctccaccaaagctccctatcattggtaaccttcaccaactaggcttacaaccccatcgctcacttgaagccctgtctcaacgctgtggccctctcatgctcctccatttcggaagcgtccccgttcttgttgtctcgtcttccgaggctgcaagtgagattatgagaacccatgacctcaatttctccaacagacccaagtcggtcatccttgagaagcttctctgcaactataaagatgtggcatcggcaccttatggcgagtattggaggcaggtgaagagtatatgcgttctcaatcttctgagcaacaagagggttcggtcttttcgcgctgtgagagaagatgaaaccaagtccatgatcgacgaaataacgaaacattcgtcgttttcaagagtcgtgaatttaagcgaaatgtttgcgacacttactaatggtgtcatttgcagagtggctctggggaggaagtacagtagcgctgattgcgttgaaggcggtcagacctttaaggagcttctgctggaatttggaaatttactgggcaccttcagtatcggggactttattccatggcttgcttggttgaaccgtgtgaatggtttgaatgctaagttagacagagtggctaaacagtttgatgactttttggataaagtgattcaagatcataaagatgatcgttcaaggagtggaaacgatggccaatctcagattgacaacgacaaccaaaacgattttgtggacgttttgctcgagattcaaaaggcgaactcgcttggttttcctcttgacataattagcatcaaggctctcatcttggatatgtttgctgctggaactgataccacatatacagttctagagtgggcaatgacggagcttttaaggcatccaagtatcatgagcaaactgcaaaatgaggtacgagaaatagtcggaaacaaatcacacataactgagaatgatttggttgatatgcgctacttgaaggcagtgatcaaggagactcttcgtttacaccctccaattccattattagtacccagaaaatccacccaagatgtgaaaataaatggttatgacatcaaagccaacacacaagttatagtcaatgcatggcaaattggaagagattccaagtcatatcacaatccggaggagtatgatccagaaaggttcttaaatactcatagtggaatagattataagggaaatgactttcaattaattccatttggagctgggaggagaatatgtccaggaattcaatttgccatggcgattaatgagattgctttggcaaatttggtgtataattttaactggacactacccggtggagcaaaatgtgaagatttggaaatgagtgaatcgaccgggaacgggcccactagtggcctccaagcccaaaaggccaaatcagcaacatattcagcctttccggcccaaagcaacagctgcatttcgctgccaccaaaaccgccaccccaccactggtgttgggccaccctcacgcctttgtcgccgtccaaccaccgtgggacaactccaagcttctcagatcacccaacaccagacgacatctga

Protein Analysis

1033

Amino Acids

116.58

Weight (kDa)

6.08

Isoelectric Point (pI)

35.52

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000061)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G48270 AT3G48280 AT3G48290 AT3G48290 AT3G48300 AT3G48300 AT3G48310 AT3G48320 AT4G20235 AT4G20235
fragaria_vesca FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g36190 FvH4_3g14160 FvH4_3g14210 FvH4_3g14260 FvH4_3g14260 FvH4_3g21100 FvH4_3g21380 FvH4_4g24460 FvH4_4g24500 FvH4_5g06571 FvH4_5g06571 FvH4_5g06571 FvH4_5g06571 FvH4_5g06572 FvH4_5g06573 FvH4_5g06574 FvH4_5g06575 FvH4_5g06576 FvH4_5g06577 FvH4_5g06577 FvH4_5g07540 FvH4_5g07550 FvH4_5g07560 FvH4_5g07570 FvH4_5g29491 FvH4_5g29492 FvH4_6g23870 FvH4_6g23880 FvH4_6g26870 FvH4_7g11861 FvH4_7g11862 FvH4_7g13050 FvH4_7g13060 FvH4_7g13080 FvH4_7g13080 FvH4_7g22630 FvH4_7g22650 FvH4_7g22651 FvH4_7g23020
malus_domestica MD03G1207400.v1.1 MD03G1214800.v1.1 MD03G1218500.v1.1 MD06G1163100.v1.1 MD06G1163300.v1.1 MD06G1163400.v1.1 MD06G1163500.v1.1 MD06G1163600.v1.1 MD06G1163800.v1.1 MD06G1164000.v1.1 MD06G1164100.v1.1 MD06G1224400.v1.1 MD08G1222800.v1.1 MD08G1222900.v1.1 MD08G1223100.v1.1 MD11G1091500.v1.1 MD11G1091800.v1.1 MD14G1163200.v1.1 MD14G1169000.v1.1 MD15G1207200.v1.1 MD15G1207300.v1.1 MD17G1259400.v1.1
prunus_persica Prupe.4G198100_v2.0.a1 Prupe.4G199100_v2.0.a1 Prupe.4G199400_v2.0.a1 Prupe.4G199800_v2.0.a1 Prupe.4G225200_v2.0.a1 Prupe.4G239100_v2.0.a1 Prupe.5G156600_v2.0.a1 Prupe.5G163500_v2.0.a1 Prupe.7G209500_v2.0.a1 Prupe.I003400_v2.0.a1
pyrus_communis pycom03g16340 pycom06g14600 pycom06g14610 pycom06g14620 pycom06g14630 pycom06g14640 pycom06g14670 pycom06g14690 pycom08g19390 pycom08g19400 pycom08g19410 pycom11g07600 pycom11g07610 pycom11g07620 pycom11g07660 pycom14g13580 pycom14g14080 pycom14g14100 pycom14g14110 pycom15g18380 pycom17g26080
rosa_chinensis RchiOBHm_Chr1g0339441 RchiOBHm_Chr1g0339451 RchiOBHm_Chr1g0352191 RchiOBHm_Chr1g0368221 RchiOBHm_Chr2g0129531 RchiOBHm_Chr2g0129541 RchiOBHm_Chr3g0477631 RchiOBHm_Chr3g0482551 RchiOBHm_Chr3g0482561 RchiOBHm_Chr3g0482571 RchiOBHm_Chr4g0411601 RchiOBHm_Chr4g0422181 RchiOBHm_Chr5g0036661 RchiOBHm_Chr5g0036731 RchiOBHm_Chr6g0274021 RchiOBHm_Chr7g0190921 RchiOBHm_Chr7g0190931 RchiOBHm_Chr7g0190941 RchiOBHm_Chr7g0190951 RchiOBHm_Chr7g0190961 RchiOBHm_Chr7g0190971 RchiOBHm_Chr7g0191001 RchiOBHm_Chr7g0191011 RchiOBHm_Chr7g0191021 RchiOBHm_Chr7g0192181 RchiOBHm_Chr7g0192191 RchiOBHm_Chr7g0192201 RchiOBHm_Chr7g0192221 RchiOBHm_Chr7g0192231 RchiOBHm_Chr7g0192281 RchiOBHm_Chr7g0197311
rosa_laevigata RLG00000003942 RLG00000004345 RLG00000004379 RLG00000004383 RLG00000004384 RLG00000004385 RLG00000004387 RLG00000004388 RLG00000004389 RLG00000004480 RLG00000004481 RLG00000004482 RLG00000004483 RLG00000004485 RLG00000008342 RLG00000008401 RLG00000013583 RLG00000017044 RLG00000027229 RLG00000028349 RLG00000028350 RLG00000028353 RLG00000028820 RLG00000033707 RLG00000033710
rosa_multiflora Rmu_co8020340.1_g000001 Rmu_co8096640.1_g000001 Rmu_co8214930.1_g000001 Rmu_co8223272.1_g000001 Rmu_co8282535.1_g000001 Rmu_co8343567.1_g000001 Rmu_co8404191.1_g000001 Rmu_co8455157.1_g000001 Rmu_sc0000062.1_g000028 Rmu_sc0000082.1_g000091 Rmu_sc0000509.1_g000017 Rmu_sc0000775.1_g000001 Rmu_sc0000999.1_g000034 Rmu_sc0001559.1_g000004 Rmu_sc0001559.1_g000009 Rmu_sc0002164.1_g000001 Rmu_sc0002164.1_g000005 Rmu_sc0002164.1_g000007 Rmu_sc0002164.1_g000008 Rmu_sc0002164.1_g000009 Rmu_sc0002164.1_g000019 Rmu_sc0002247.1_g000009 Rmu_sc0002373.1_g000002 Rmu_sc0002373.1_g000003 Rmu_sc0002944.1_g000059 Rmu_sc0003930.1_g000004 Rmu_sc0004958.1_g000001 Rmu_sc0005197.1_g000014 Rmu_sc0005898.1_g000008 Rmu_sc0005898.1_g000009 Rmu_sc0005898.1_g000015 Rmu_sc0006059.1_g000004 Rmu_sc0006059.1_g000010 Rmu_sc0006903.1_g000007 Rmu_sc0006903.1_g000008 Rmu_sc0006968.1_g000001 Rmu_sc0011009.1_g000009 Rmu_sc0022852.1_g000002 Rmu_sc0033854.1_g000001 Rmu_ssc0000421.1_g000057 Rmu_ssc0000421.1_g000067 Rmu_ssc0000421.1_g000069 Rmu_ssc0000421.1_g000072 Rmu_ssc0000421.1_g000081 Rmu_ssc0000421.1_g000086
rosa_roxburghii Rroxscaffold_158G00443680 Rroxscaffold_158G00443710 Rroxscaffold_158G00443720 Rroxscaffold_158G00443740 Rroxscaffold_1G00034950 Rroxscaffold_1G00044240 Rroxscaffold_1G00044270 Rroxscaffold_3G00241380 Rroxscaffold_3G00247000 Rroxscaffold_3G00263120 Rroxscaffold_3G00263150 Rroxscaffold_3G00263160 Rroxscaffold_3G00263170 Rroxscaffold_3G00263180 Rroxscaffold_3G00263190 Rroxscaffold_3G00263210 Rroxscaffold_3G00263230 Rroxscaffold_3G00263260 Rroxscaffold_3G00264110 Rroxscaffold_3G00264130 Rroxscaffold_3G00264160 Rroxscaffold_3G00264180 Rroxscaffold_3G00264200 Rroxscaffold_4G00288750 Rroxscaffold_4G00303110 Rroxscaffold_4G00303120 Rroxscaffold_4G00322280 Rroxscaffold_5G00356200 Rroxscaffold_6G00399150 Rroxscaffold_6G00399290 Rroxscaffold_7G00194770
rosa_rugosa Rorug01G0225300 Rorug01G0225400 Rorug01G0225800 Rorug01G0226000 Rorug01G0339400 Rorug01G0451500 Rorug03G0196900 Rorug03G0294900 Rorug04G0107500 Rorug04G0107600 Rorug04G0129700 Rorug04G0178000 Rorug05G0144900.1 Rorug05G0145000 Rorug05G0228000 Rorug05G0228600 Rorug06G0078300 Rorug06G0508000 Rorug06G0508100 Rorug06G0508100 Rorug06G0508400 Rorug06G0513400 Rorug07G0000100 Rorug07G0000200 Rorug07G0000300 Rorug07G0000500 Rorug07G0000800
rosa_samantha Rh1BG060400 Rh1BG210300 Rh1BG210700 Rh1BG210800 Rh1BG309800 Rh1CG223800 Rh1CG224200 Rh1CG325200 Rh1DG237000 Rh1DG237400 Rh1DG341600 Rh2DG365700 Rh3AG212500 Rh3AG248400 Rh3CG239800 Rh3DG239300 Rh4AG169300 Rh4BG166200 Rh4BG240500 Rh4BG240600 Rh4DG163600 Rh5AG249600 Rh5AG249900 Rh5AG250000 Rh5CG283100 Rh5CG283200 Rh5CG283400 Rh5DG259200 Rh5DG259800 Rh6BG197700 Rh6CG197800 Rh6DG189400 Rh7AG114900 Rh7AG115000 Rh7AG115200 Rh7AG115300 Rh7AG115400 Rh7AG115500 Rh7AG123900 Rh7AG124100 Rh7AG124300 Rh7BG117200 Rh7BG117400 Rh7BG118400 Rh7BG125400 Rh7BG125600 Rh7BG125700 Rh7BG125800 Rh7BG125900 Rh7BG126000 Rh7BG126400 Rh7BG126600 Rh7BG126700 Rh7BG166200 Rh7DG118600 Rh7DG118700 Rh7DG118900 Rh7DG119000 Rh7DG119100 Rh7DG127400 Rh7DG127600 Rh7DG127700 Rh7DG127900 Rh7DG128200
rosa_wichuraiana Rw1G013270 Rw1G020790 Rw2G027890 Rw2G028040 Rw3G019240 Rw4G014070 Rw4G020540 Rw5G021320 Rw5G022970 Rw6G016920 Rw7G010020 Rw7G010040 Rw7G010580 Rw7G010590 Rw7G010600 Rw7G010610 Rw7G010620 Rw7G010630 Rw7G010640 Rw7G010690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2721
AarI CACCTGC 1 cut(s) 1777
Acc36I ACCTGC 1 cut(s) 1777
AccB1I GGYRCC 3 cut(s) 154, 1762, 2057
AccI GTMKAC 1 cut(s) 1470
AccII CGCG 2 cut(s) 60, 1845
AccIII TCCGGA 1 cut(s) 2668
AciI CCGC 3 cut(s) 58, 2010, 2996
AclI AACGTT 1 cut(s) 447
AclWI GGATC 4 cut(s) 1022, 1151, 1425, 2675
AcoI YGGCCR 2 cut(s) 595, 2215
AcsI RAATTY 8 cut(s) 651, 664, 1262, 1918, 2039, 2047, 2778, 2818
AcuI CTGAAG 1 cut(s) 2047
AcyI GRCGYC 1 cut(s) 155
AdeI CACNNNGTG 1 cut(s) 958
AfaI GTAC 5 cut(s) 170, 385, 1985, 2439, 2556
AfeI AGCGCT 2 cut(s) 1443, 1993
AfiI CCNNNNNNNGG 6 cut(s) 760, 1284, 1535, 2898, 2909, 3009
AflII CTTAAG 1 cut(s) 313
AhdI GACNNNNNGTC 1 cut(s) 148
AhlI ACTAGT 2 cut(s) 931, 2906
AjnI CCWGG 3 cut(s) 1150, 1371, 2773
Alw26I GTCTC 8 cut(s) 43, 135, 169, 828, 893, 1593, 1651, 2513
AlwI GGATC 4 cut(s) 1022, 1151, 1425, 2675
Ama87I CYCGRG 2 cut(s) 1031, 2267
Aor13HI TCCGGA 1 cut(s) 2668
Aor51HI AGCGCT 2 cut(s) 1443, 1993
AoxI GGCC 8 cut(s) 595, 1600, 2215, 2900, 2911, 2928, 2958, 3018
ApaI GGGCCC 1 cut(s) 2904
ApeKI GCWGC 6 cut(s) 124, 725, 1661, 2345, 2973, 2983
ApoI RAATTY 8 cut(s) 651, 664, 1262, 1918, 2039, 2047, 2778, 2818
ArsI GACNNNNNNTTYG 2 cut(s) 1883, 1915
AseI ATTAAT 2 cut(s) 2741, 2799
Asp700I GAANNNNTTC 1 cut(s) 2647
AspA2I CCTAGG 1 cut(s) 938
AspLEI GCGC 5 cut(s) 157, 1444, 1847, 1994, 2496
AspS9I GGNCC 5 cut(s) 1601, 2900, 2901, 2959, 3018
AsuC2I CCSGG 2 cut(s) 2850, 2893
AsuHPI GGTGA 5 cut(s) 176, 1497, 1538, 1801, 3071
AvaI CYCGRG 2 cut(s) 1031, 2267
AvrII CCTAGG 1 cut(s) 938
BaeGI GKGCMC 2 cut(s) 2060, 2904
BalI TGGCCA 2 cut(s) 597, 2217
BanI GGYRCC 3 cut(s) 154, 1762, 2057
BanII GRGCYC 2 cut(s) 58, 2904
BarI GAAGNNNNNNTAC 2 cut(s) 113, 145
BbsI GAAGAC 1 cut(s) 1644
BbvCI CCTCAGC 1 cut(s) 48
BbvI GCAGC 6 cut(s) 111, 712, 1648, 2332, 2960, 2970
BccI CCATC 6 cut(s) 383, 587, 784, 1470, 1575, 2207
BceAI ACGGC 1 cut(s) 3025
BcgI CGANNNNNNTGC 2 cut(s) 1916, 1950
BciT130I CCWGG 3 cut(s) 1152, 1373, 2775
BciVI GTATCC 1 cut(s) 1328
BclI TGATCA 1 cut(s) 2511
BcnI CCSGG 2 cut(s) 2850, 2893
BcoDI GTCTC 8 cut(s) 43, 135, 169, 828, 893, 1593, 1651, 2513
BcuI ACTAGT 2 cut(s) 931, 2906
BfaI CTAG 7 cut(s) 932, 939, 1001, 1439, 1553, 2375, 2907
BfmI CTRYAG 1 cut(s) 806
BfoI RGCGCY 3 cut(s) 158, 1445, 1995
BfrI CTTAAG 1 cut(s) 313
BfuAI ACCTGC 1 cut(s) 1777
BfuI GTATCC 1 cut(s) 1328
BglI GCCNNNNNGGC 2 cut(s) 2927, 2957
BisI GCNGC 6 cut(s) 125, 726, 1662, 2346, 2974, 2984
BlnI CCTAGG 1 cut(s) 938
BlsI GCNGC 6 cut(s) 126, 727, 1663, 2347, 2975, 2985
BmcAI AGTACT 2 cut(s) 170, 385
Bme1390I CCNGG 5 cut(s) 1152, 1373, 2775, 2850, 2893
BmeRI GACNNNNNGTC 1 cut(s) 148
BmeT110I CYCGRG 2 cut(s) 1031, 2267
BmgT120I GGNCC 5 cut(s) 1601, 2900, 2901, 2959, 3018
BmiI GGNNCC 5 cut(s) 55, 156, 1764, 2059, 2902
BmrFI CCNGG 5 cut(s) 1152, 1373, 2775, 2850, 2893
BmrI ACTGGG 1 cut(s) 2063
BmsI GCATC 6 cut(s) 296, 450, 793, 1766, 2325, 2413
BmuI ACTGGG 1 cut(s) 2063
BoxI GACNNNNGTC 1 cut(s) 1711
BpiI GAAGAC 1 cut(s) 1644
BpmI CTGGAG 2 cut(s) 193, 903
Bpu10I CCTNAGC 1 cut(s) 48
BpuEI CTTGAG 1 cut(s) 1745
BpuMI CCSGG 2 cut(s) 2850, 2893
Bsa29I ATCGAT 1 cut(s) 263
BsaHI GRCGYC 1 cut(s) 155
BsaJI CCNNGG 7 cut(s) 938, 1150, 1188, 1656, 2084, 2790, 3052
BsaWI WCCGGW 2 cut(s) 1331, 2668
BsaXI ACNNNNNCTCC 4 cut(s) 1509, 1539, 2755, 2785
Bsc4I CCNNNNNNNGG 6 cut(s) 760, 1284, 1535, 2898, 2909, 3009
Bse1I ACTGG 7 cut(s) 176, 871, 920, 1273, 2058, 2843, 3014
Bse3DI GCAATG 2 cut(s) 771, 2391
BseAI TCCGGA 1 cut(s) 2668
BseBI CCWGG 3 cut(s) 1152, 1373, 2775
BseCI ATCGAT 1 cut(s) 263
BseDI CCNNGG 7 cut(s) 938, 1150, 1188, 1656, 2084, 2790, 3052
BseGI GGATG 4 cut(s) 784, 862, 1719, 2404
BseLI CCNNNNNNNGG 6 cut(s) 760, 1284, 1535, 2898, 2909, 3009
BseMI GCAATG 2 cut(s) 771, 2391
BseMII CTCAG 7 cut(s) 39, 200, 392, 1808, 2237, 2463, 3087
BseNI ACTGG 7 cut(s) 176, 871, 920, 1273, 2058, 2843, 3014
BseRI GAGGAG 4 cut(s) 1067, 1604, 2687, 2776
BseSI GKGCMC 2 cut(s) 2060, 2904
BseXI GCAGC 6 cut(s) 111, 712, 1648, 2332, 2960, 2970
BseYI CCCAGC 1 cut(s) 2756
BsgI GTGCAG 1 cut(s) 857
Bsh1236I CGCG 2 cut(s) 60, 1845
Bsh1285I CGRYCG 1 cut(s) 2892
BshFI GGCC 8 cut(s) 597, 1602, 2217, 2902, 2913, 2930, 2960, 3020
BshNI GGYRCC 3 cut(s) 154, 1762, 2057
BshVI ATCGAT 1 cut(s) 263
BsiEI CGRYCG 1 cut(s) 2892
BsiHKCI CYCGRG 2 cut(s) 1031, 2267
BsiSI CCGG 6 cut(s) 729, 1332, 2669, 2850, 2892, 2957
BslFI GGGAC 5 cut(s) 8, 450, 1616, 2087, 3070
BslI CCNNNNNNNGG 6 cut(s) 760, 1284, 1535, 2898, 2909, 3009
BsmAI GTCTC 8 cut(s) 43, 135, 169, 828, 893, 1593, 1651, 2513
BsmBI CGTCTC 1 cut(s) 135
BsmFI GGGAC 5 cut(s) 8, 450, 1616, 2087, 3070
BsmI GAATGC 3 cut(s) 496, 1012, 2125
BsnI GGCC 8 cut(s) 597, 1602, 2217, 2902, 2913, 2930, 2960, 3020
BsoBI CYCGRG 2 cut(s) 1031, 2267
Bsp120I GGGCCC 1 cut(s) 2900
Bsp1286I GDGCHC 3 cut(s) 58, 2060, 2904
Bsp13I TCCGGA 1 cut(s) 2668
Bsp19I CCATGG 2 cut(s) 2084, 2790
BspACI CCGC 3 cut(s) 58, 2010, 2996
BspANI GGCC 8 cut(s) 597, 1602, 2217, 2902, 2913, 2930, 2960, 3020
BspCNI CTCAG 7 cut(s) 40, 201, 393, 1809, 2236, 2464, 3086
BspDI ATCGAT 1 cut(s) 263
BspEI TCCGGA 1 cut(s) 2668
BspFNI CGCG 2 cut(s) 60, 1845
BspHI TCATGA 3 cut(s) 66, 795, 2415
BspLI GGNNCC 5 cut(s) 55, 156, 1764, 2059, 2902
BspMAI CTGCAG 1 cut(s) 810
BspMI ACCTGC 1 cut(s) 1777
BspPI GGATC 4 cut(s) 1022, 1151, 1425, 2675
BspT107I GGYRCC 3 cut(s) 154, 1762, 2057
BspTI CTTAAG 1 cut(s) 313
BsrDI GCAATG 2 cut(s) 771, 2391
BsrI ACTGG 7 cut(s) 176, 871, 920, 1273, 2058, 2843, 3014
BssECI CCNNGG 7 cut(s) 938, 1150, 1188, 1656, 2084, 2790, 3052
BssNAI GTATAC 1 cut(s) 1471
BssNI GRCGYC 1 cut(s) 155
BssT1I CCWWGG 4 cut(s) 938, 1188, 2084, 2790
Bst1107I GTATAC 1 cut(s) 1471
Bst2UI CCWGG 3 cut(s) 1152, 1373, 2775
Bst4CI ACNGT 9 cut(s) 109, 485, 528, 1345, 1988, 2105, 2148, 2371, 3053
Bst6I CTCTTC 7 cut(s) 46, 179, 243, 1018, 1787, 2529, 2638
BstACI GRCGYC 1 cut(s) 155
BstAFI CTTAAG 1 cut(s) 313
BstAPI GCANNNNNTGC 1 cut(s) 2973
BstC8I GCNNGC 4 cut(s) 58, 564, 911, 2091
BstDEI CTNAG 8 cut(s) 48, 209, 401, 1817, 2124, 2223, 2472, 3073
BstDSI CCRYGG 3 cut(s) 2084, 2790, 3052
BstEII GGTNACC 1 cut(s) 1538
BstF5I GGATG 4 cut(s) 784, 862, 1719, 2404
BstFNI CGCG 2 cut(s) 60, 1845
BstH2I RGCGCY 3 cut(s) 158, 1445, 1995
BstHHI GCGC 5 cut(s) 157, 1444, 1847, 1994, 2496
BstMAI GTCTC 8 cut(s) 43, 135, 169, 828, 893, 1593, 1651, 2513
BstMCI CGRYCG 1 cut(s) 2892
BstNI CCWGG 3 cut(s) 1152, 1373, 2775
BstNSI RCATGY 1 cut(s) 566
BstPAI GACNNNNGTC 1 cut(s) 1711
BstPI GGTNACC 1 cut(s) 1538
BstSCI CCNGG 5 cut(s) 1150, 1371, 2773, 2848, 2891
BstSFI CTRYAG 1 cut(s) 806
BstSLI GKGCMC 2 cut(s) 2060, 2904
BstUI CGCG 2 cut(s) 60, 1845
BstV1I GCAGC 6 cut(s) 111, 712, 1648, 2332, 2960, 2970
BstV2I GAAGAC 1 cut(s) 1644
BstX2I RGATCY 3 cut(s) 1027, 1143, 1417
BstYI RGATCY 3 cut(s) 1027, 1143, 1417
BstZ17I GTATAC 1 cut(s) 1471
Bsu15I ATCGAT 1 cut(s) 263
BsuI GTATCC 1 cut(s) 1328
BsuRI GGCC 8 cut(s) 597, 1602, 2217, 2902, 2913, 2930, 2960, 3020
BsuTUI ATCGAT 1 cut(s) 263
BtgI CCRYGG 3 cut(s) 2084, 2790, 3052
BtgZI GCGATG 1 cut(s) 1553
BtsCI GGATG 4 cut(s) 784, 862, 1719, 2404
BtsI GCAGTG 3 cut(s) 894, 1167, 2514
BtsIMutI CAGTG 4 cut(s) 894, 1167, 2514, 3007
BveI ACCTGC 1 cut(s) 1777
Cac8I GCNNGC 4 cut(s) 58, 564, 911, 2091
CciI TCATGA 3 cut(s) 66, 795, 2415
CfoI GCGC 5 cut(s) 157, 1444, 1847, 1994, 2496
Cfr13I GGNCC 5 cut(s) 1601, 2900, 2901, 2959, 3018
ClaI ATCGAT 1 cut(s) 263
CseI GACGC 4 cut(s) 10, 138, 447, 1618
Csp6I GTAC 5 cut(s) 169, 384, 1984, 2438, 2555
CspCI CAANNNNNGTGG 4 cut(s) 2996, 3031, 3034, 3069
CviQI GTAC 5 cut(s) 169, 384, 1984, 2438, 2555
DdeI CTNAG 8 cut(s) 48, 209, 401, 1817, 2124, 2223, 2472, 3073
DinI GGCGCC 1 cut(s) 156
DraI TTTAAA 1 cut(s) 882
DraIII CACNNNGTG 1 cut(s) 958
DriI GACNNNNNGTC 1 cut(s) 148
EaeI YGGCCR 2 cut(s) 595, 2215
Eam1104I CTCTTC 7 cut(s) 46, 179, 243, 1018, 1787, 2529, 2638
Eam1105I GACNNNNNGTC 1 cut(s) 148
EarI CTCTTC 7 cut(s) 46, 179, 243, 1018, 1787, 2529, 2638
Eco130I CCWWGG 4 cut(s) 938, 1188, 2084, 2790
Eco24I GRGCYC 2 cut(s) 58, 2904
Eco47III AGCGCT 2 cut(s) 1443, 1993
Eco57I CTGAAG 1 cut(s) 2047
Eco88I CYCGRG 2 cut(s) 1031, 2267
Eco91I GGTNACC 1 cut(s) 1538
EcoO65I GGTNACC 1 cut(s) 1538
EcoRI GAATTC 1 cut(s) 2778
EcoRII CCWGG 3 cut(s) 1150, 1371, 2773
EcoT14I CCWWGG 4 cut(s) 938, 1188, 2084, 2790
EcoT22I ATGCAT 2 cut(s) 1012, 2632
EcoT38I GRGCYC 2 cut(s) 58, 2904
EgeI GGCGCC 1 cut(s) 156
EheI GGCGCC 1 cut(s) 156
ErhI CCWWGG 4 cut(s) 938, 1188, 2084, 2790
Esp3I CGTCTC 1 cut(s) 135
FaqI GGGAC 5 cut(s) 8, 450, 1616, 2087, 3070
FauI CCCGC 1 cut(s) 65
FbaI TGATCA 1 cut(s) 2511
FblI GTMKAC 1 cut(s) 1470
Fnu4HI GCNGC 6 cut(s) 125, 726, 1662, 2346, 2974, 2984
FokI GGATG 4 cut(s) 771, 869, 1706, 2391
FriOI GRGCYC 2 cut(s) 58, 2904
Fsp4HI GCNGC 6 cut(s) 125, 726, 1662, 2346, 2974, 2984
FspBI CTAG 7 cut(s) 932, 939, 1001, 1439, 1553, 2375, 2907
GlaI GCGC 5 cut(s) 156, 1443, 1846, 1993, 2495
GluI GCNGC 6 cut(s) 125, 726, 1662, 2346, 2974, 2984
GsaI CCCAGC 1 cut(s) 2760
GsuI CTGGAG 2 cut(s) 193, 903
HaeII RGCGCY 3 cut(s) 158, 1445, 1995
HaeIII GGCC 8 cut(s) 597, 1602, 2217, 2902, 2913, 2930, 2960, 3020
HapII CCGG 6 cut(s) 729, 1332, 2669, 2850, 2892, 2957
HgaI GACGC 4 cut(s) 10, 138, 447, 1618
HhaI GCGC 5 cut(s) 157, 1444, 1847, 1994, 2496
Hin1I GRCGYC 1 cut(s) 155
Hin6I GCGC 5 cut(s) 155, 1442, 1845, 1992, 2494
HinP1I GCGC 5 cut(s) 155, 1442, 1845, 1992, 2494
HindIII AAGCTT 2 cut(s) 1730, 3067
HpaII CCGG 6 cut(s) 729, 1332, 2669, 2850, 2892, 2957
HphI GGTGA 5 cut(s) 176, 1497, 1538, 1801, 3071
Hpy166II GTNNAC 4 cut(s) 637, 1471, 2257, 2531
Hpy8I GTNNAC 4 cut(s) 637, 1471, 2257, 2531
Hpy99I CGWCG 4 cut(s) 154, 1088, 1883, 1903
HpyAV CCTTC 9 cut(s) 389, 1134, 1378, 1441, 1521, 1553, 2000, 2071, 2497
HpyCH4III ACNGT 9 cut(s) 109, 485, 528, 1345, 1988, 2105, 2148, 2371, 3053
HpyCH4IV ACGT 3 cut(s) 144, 447, 2259
HpyF3I CTNAG 8 cut(s) 48, 209, 401, 1817, 2124, 2223, 2472, 3073
HpySE526I ACGT 3 cut(s) 144, 447, 2259
Hsp92I GRCGYC 1 cut(s) 155
HspAI GCGC 5 cut(s) 155, 1442, 1845, 1992, 2494
KasI GGCGCC 1 cut(s) 154
Kpn2I TCCGGA 1 cut(s) 2668
Ksp22I TGATCA 1 cut(s) 2511
LmnI GCTCC 9 cut(s) 9, 53, 1130, 1530, 1617, 2026, 2392, 2753, 2855
Lsp1109I GCAGC 6 cut(s) 111, 712, 1648, 2332, 2960, 2970
LweI GCATC 6 cut(s) 296, 450, 793, 1766, 2325, 2413
MaeI CTAG 7 cut(s) 932, 939, 1001, 1439, 1553, 2375, 2907
MaeII ACGT 3 cut(s) 144, 447, 2259
MaeIII GTNAC 2 cut(s) 1367, 1538
MfeI CAATTG 1 cut(s) 1213
MflI RGATCY 3 cut(s) 1027, 1143, 1417
MhlI GDGCHC 3 cut(s) 58, 2060, 2904
MlsI TGGCCA 2 cut(s) 597, 2217
MluNI TGGCCA 2 cut(s) 597, 2217
Mly113I GGCGCC 1 cut(s) 155
MlyI GAGTC 4 cut(s) 1043, 1349, 1920, 2515
MmeI TCCRAC 5 cut(s) 117, 1138, 1725, 2431, 3069
Mox20I TGGCCA 2 cut(s) 597, 2217
Mph1103I ATGCAT 2 cut(s) 1012, 2632
MroI TCCGGA 1 cut(s) 2668
MroXI GAANNNNTTC 1 cut(s) 2647
MscI TGGCCA 2 cut(s) 597, 2217
MslI CAYNNNNRTG 1 cut(s) 2187
Msp20I TGGCCA 2 cut(s) 597, 2217
MspA1I CMGCKG 1 cut(s) 2973
MspCI CTTAAG 1 cut(s) 313
MspI CCGG 6 cut(s) 729, 1332, 2669, 2850, 2892, 2957
MspR9I CCNGG 5 cut(s) 1152, 1373, 2775, 2850, 2893
MunI CAATTG 1 cut(s) 1213
Mva1269I GAATGC 3 cut(s) 496, 1012, 2125
MvaI CCWGG 3 cut(s) 1152, 1373, 2775
MvnI CGCG 2 cut(s) 60, 1845
NarI GGCGCC 1 cut(s) 155
NciI CCSGG 2 cut(s) 2850, 2893
NcoI CCATGG 2 cut(s) 2084, 2790
NlaIV GGNNCC 5 cut(s) 55, 156, 1764, 2059, 2902
NsiI ATGCAT 2 cut(s) 1012, 2632
NspI RCATGY 1 cut(s) 566
PaeI GCATGC 1 cut(s) 566
PaeR7I CTCGAG 1 cut(s) 2267
PagI TCATGA 3 cut(s) 66, 795, 2415
PaqCI CACCTGC 1 cut(s) 1777
PcsI WCGNNNNNNNCGW 2 cut(s) 1895, 2265
PctI GAATGC 3 cut(s) 496, 1012, 2125
PdmI GAANNNNTTC 1 cut(s) 2647
PfeI GAWTC 9 cut(s) 202, 553, 817, 1078, 1396, 2173, 2272, 2648, 2885
PfoI TCCNGGA 1 cut(s) 2773
PkrI GCNGC 6 cut(s) 126, 727, 1663, 2347, 2975, 2985
PleI GAGTC 4 cut(s) 1042, 1349, 1919, 2515
PluTI GGCGCC 1 cut(s) 158
PpsI GAGTC 4 cut(s) 1042, 1349, 1919, 2515
PshAI GACNNNNGTC 1 cut(s) 1711
PshBI ATTAAT 2 cut(s) 2741, 2799
PsiI TTATAA 1 cut(s) 2721
Psp1406I AACGTT 1 cut(s) 447
Psp6I CCWGG 3 cut(s) 1150, 1371, 2773
PspEI GGTNACC 1 cut(s) 1538
PspFI CCCAGC 1 cut(s) 2756
PspGI CCWGG 3 cut(s) 1150, 1371, 2773
PspN4I GGNNCC 5 cut(s) 55, 156, 1764, 2059, 2902
PspOMI GGGCCC 1 cut(s) 2900
PspPI GGNCC 5 cut(s) 1601, 2900, 2901, 2959, 3018
PstI CTGCAG 1 cut(s) 810
PsuI RGATCY 3 cut(s) 1027, 1143, 1417
PvuII CAGCTG 1 cut(s) 2973
RsaI GTAC 5 cut(s) 170, 385, 1985, 2439, 2556
RsaNI GTAC 5 cut(s) 169, 384, 1984, 2438, 2555
RseI CAYNNNNRTG 1 cut(s) 2187
SatI GCNGC 6 cut(s) 125, 726, 1662, 2346, 2974, 2984
Sau96I GGNCC 5 cut(s) 1601, 2900, 2901, 2959, 3018
ScaI AGTACT 2 cut(s) 170, 385
SchI GAGTC 4 cut(s) 1043, 1349, 1920, 2515
ScrFI CCNGG 5 cut(s) 1152, 1373, 2775, 2850, 2893
SduI GDGCHC 3 cut(s) 58, 2060, 2904
SfaNI GCATC 6 cut(s) 296, 450, 793, 1766, 2325, 2413
SfcI CTRYAG 1 cut(s) 806
SfoI GGCGCC 1 cut(s) 156
Sfr274I CTCGAG 1 cut(s) 2267
SlaI CTCGAG 1 cut(s) 2267
SmiMI CAYNNNNRTG 1 cut(s) 2187
SmlI CTYRAG 3 cut(s) 313, 1724, 2267
SmoI CTYRAG 3 cut(s) 313, 1724, 2267
SpeI ACTAGT 2 cut(s) 931, 2906
SphI GCATGC 1 cut(s) 566
SsiI CCGC 3 cut(s) 58, 2010, 2996
SspDI GGCGCC 1 cut(s) 154
SspI AATATT 1 cut(s) 1410
SspMI CTAG 7 cut(s) 932, 939, 1001, 1439, 1553, 2375, 2907
StyD4I CCNGG 5 cut(s) 1150, 1371, 2773, 2848, 2891
StyI CCWWGG 4 cut(s) 938, 1188, 2084, 2790
TaaI ACNGT 9 cut(s) 109, 485, 528, 1345, 1988, 2105, 2148, 2371, 3053
TaiI ACGT 3 cut(s) 147, 450, 2262
TaqI TCGA 8 cut(s) 263, 270, 684, 820, 1404, 1878, 2268, 2888
TaqII GACCGA 2 cut(s) 1705, 1824
TatI WGTACW 3 cut(s) 168, 383, 1983
TfiI GAWTC 9 cut(s) 202, 553, 817, 1078, 1396, 2173, 2272, 2648, 2885
TscAI CASTG 4 cut(s) 894, 1174, 2514, 3014
TseI GCWGC 6 cut(s) 124, 725, 1661, 2345, 2973, 2983
TspDTI ATGAA 7 cut(s) 83, 197, 738, 812, 1409, 1440, 1875
TspGWI ACGGA 3 cut(s) 866, 1274, 2405
TspRI CASTG 4 cut(s) 894, 1174, 2514, 3014
Vha464I CTTAAG 1 cut(s) 313
VspI ATTAAT 2 cut(s) 2741, 2799
XapI RAATTY 8 cut(s) 651, 664, 1262, 1918, 2039, 2047, 2778, 2818
XbaI TCTAGA 1 cut(s) 2374
XceI RCATGY 1 cut(s) 566
XcmI CCANNNNNNNNNTGG 3 cut(s) 471, 2091, 3006
XhoI CTCGAG 1 cut(s) 2267
XmaJI CCTAGG 1 cut(s) 938
XmiI GTMKAC 1 cut(s) 1470
XmnI GAANNNNTTC 1 cut(s) 2647
XspI CTAG 7 cut(s) 932, 939, 1001, 1439, 1553, 2375, 2907
ZrmI AGTACT 2 cut(s) 170, 385
Zsp2I ATGCAT 2 cut(s) 1012, 2632
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.