Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000061

Physical Location & Seq

Genomic Coordinates Forward (+)

9823780 .. 9826056

Gene Structure 2277 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ17061

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1560 bp

ATGGCGGAGCTCATCAACAATGAAACTCTTTCACTTGTACTCGTCGCCGTTTTCCTCATCCTCTTGTACAAGTGGTCTTCTTCCACTTCCAGTAGTACCAAAAACTCACCACCTTCTCCACCAAAACTCCCCATCATCGGAAACCTTCACCAACTAGGCGCTCGAGGAACTCCACCCCATCGCGCACTTCAAGCCTTATCTCGAGTACATGGTCCTCTCATGCTCCTCCATTTCGGAAGCGTCCCCGTCCTCGTTGTCTCGTCGGCCGAGGCTGCCCGGGAGATCATGAAAACTCATGACCTCGCATTCGCCAGCAGACCTAAGTCCACCGCCTTCGAGAAGCTTCTCTACAACTACAAAGACGTGGCAACTGCGCCATACGGTGATTACTGGAGGCAGGTGAAGAGCATATGCGTGCTGAATCTCTTGAGCGCCAAGAAGGTTCGGTCCTTTCGCGGCGTGAGAGAAGAGGAGACCAGATCCATGATCAACAAGATAAAGGAAACGTCACAACGGGGAGGAGTTGTGAACGTGAGGAAGATGCTTATGACGCTTACGAACGACGTCGTCTCGAGGGCAGCTCTAGGGAGGAAGTACCACGATGATGGGGAATTTAAGGAGCTCTCCACCGAATTTACGGAGTTGGCGGGAAGTCTTCATGTTGGAGACTTAATTCCATGGCTTGGTTGGTTGAGCCGTCTTGGTGGTTTGGACGCTAAACTAGTCAGTTTGGCTAAACGGTACGATGAATTTTTGGATACGGTGCTTCAAGAGCATATTGATAAAACTTCAGACACTAGCAGCAGAAATGATCAAGGCCTTGATGATCAGAACGAGGATAACAAGGATTTTGTGGATGTTTTACTTGAAATTCAGCGGCAAAACTTGCTCAATTTTCCTCTTGACAGAGTTAGCATAAAGGGTGTCGTCTTGGATATGTTCCTTGCTGGGACTGATACCACATCTACACTTCTAGAGTGGGCAATGGCAGAGATTTTGAAGCACCCAAGGGTCATGAGCAAATTGCAGAAAGAAGTTAGGGGTGTAATAAAAGGAGAAGAAGAAATATTAACTGAGGATGATTTGGTTGATATGCACTACTTGAAGGCAGTGATTAAGGAGGCTCTTCGCTTACATCCTCCATTTACCCTACTATTGCCAAAGATGTCGACTCAAGATGTGAAAATAAACGGTTATGACATTAAGGCTAACACACAAGTCTTGGTGAATGCCTGGCAGATCGGGAGAGATCCCGAATCATTCAATGACAAATTAGAAGAGTTTGAGCCGGAGAGGTTCTTGGAGGATAATAGTGGTCTAAGTTATAAAGGGACTGACTTCCAGTTTATTCCATTCGGAGCTGGCAGGAGGATCTGTCCCGGGATCCAGTTTGCTACGACTGTCAATGAGATTGCTCTAGCAAATTTGCTGCACAAGTTTGATTGGACATTTTCCGGTGGAGTAAGAAATGAGGATTTAGACATGACTGAATCATCTGGCTTAACAATTCATAAGAAATACCCTCTTAAAGCCGTGGCTATTCCATATTCATCAGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005794 GO:0005911 GO:0006629 GO:0006720 GO:0006721 GO:0006722 GO:0008150 GO:0008152 GO:0009058 GO:0009506 GO:0009507 GO:0009536 GO:0009987 GO:0012505 GO:0016020 GO:0016491 GO:0016705 GO:0016709 GO:0019748 GO:0030054 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044255 GO:0044424 GO:0044444 GO:0044464 GO:0044550 GO:0055044 GO:0055114 GO:0071704

KEGG Pathways

Metabolic & Signaling

ko00140 ko00380 ko00590 ko00591 ko00830 ko00980 ko01100 ko04212 ko04726 ko04750 ko04913 ko04917 ko04927 ko04934 ko05204 map00140 map00380 map00590 map00591 map00830 map00980 map01100 map04212 map04726 map04750 map04913 map04917 map04927 map04934 map05204

Pfam Domains

Protein Families

p450

Protein Analysis

519

Amino Acids

58.2

Weight (kDa)

6.26

Isoelectric Point (pI)

39.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
p450	PF00067	37 - 507	4.2e-100	Cytochrome P450

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

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Orthologous Genes (Group: OG0000061)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G48270 AT3G48280 AT3G48290 AT3G48290 AT3G48300 AT3G48300 AT3G48310 AT3G48320 AT4G20235 AT4G20235
fragaria_vesca	FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g36190 FvH4_3g14160 FvH4_3g14210 FvH4_3g14260 FvH4_3g14260 FvH4_3g21100 FvH4_3g21380 FvH4_4g24460 FvH4_4g24500 FvH4_5g06571 FvH4_5g06571 FvH4_5g06571 FvH4_5g06571 FvH4_5g06572 FvH4_5g06573 FvH4_5g06574 FvH4_5g06575 FvH4_5g06576 FvH4_5g06577 FvH4_5g06577 FvH4_5g07540 FvH4_5g07550 FvH4_5g07560 FvH4_5g07570 FvH4_5g29491 FvH4_5g29492 FvH4_6g23870 FvH4_6g23880 FvH4_6g26870 FvH4_7g11861 FvH4_7g11862 FvH4_7g13050 FvH4_7g13060 FvH4_7g13080 FvH4_7g13080 FvH4_7g22630 FvH4_7g22650 FvH4_7g22651 FvH4_7g23020
malus_domestica	MD03G1207400.v1.1 MD03G1214800.v1.1 MD03G1218500.v1.1 MD06G1163100.v1.1 MD06G1163300.v1.1 MD06G1163400.v1.1 MD06G1163500.v1.1 MD06G1163600.v1.1 MD06G1163800.v1.1 MD06G1164000.v1.1 MD06G1164100.v1.1 MD06G1224400.v1.1 MD08G1222800.v1.1 MD08G1222900.v1.1 MD08G1223100.v1.1 MD11G1091500.v1.1 MD11G1091800.v1.1 MD14G1163200.v1.1 MD14G1169000.v1.1 MD15G1207200.v1.1 MD15G1207300.v1.1 MD17G1259400.v1.1
prunus_persica	Prupe.4G198100_v2.0.a1 Prupe.4G199100_v2.0.a1 Prupe.4G199400_v2.0.a1 Prupe.4G199800_v2.0.a1 Prupe.4G225200_v2.0.a1 Prupe.4G239100_v2.0.a1 Prupe.5G156600_v2.0.a1 Prupe.5G163500_v2.0.a1 Prupe.7G209500_v2.0.a1 Prupe.I003400_v2.0.a1
pyrus_communis	pycom03g16340 pycom06g14600 pycom06g14610 pycom06g14620 pycom06g14630 pycom06g14640 pycom06g14670 pycom06g14690 pycom08g19390 pycom08g19400 pycom08g19410 pycom11g07600 pycom11g07610 pycom11g07620 pycom11g07660 pycom14g13580 pycom14g14080 pycom14g14100 pycom14g14110 pycom15g18380 pycom17g26080
rosa_chinensis	RchiOBHm_Chr1g0339441 RchiOBHm_Chr1g0339451 RchiOBHm_Chr1g0352191 RchiOBHm_Chr1g0368221 RchiOBHm_Chr2g0129531 RchiOBHm_Chr2g0129541 RchiOBHm_Chr3g0477631 RchiOBHm_Chr3g0482551 RchiOBHm_Chr3g0482561 RchiOBHm_Chr3g0482571 RchiOBHm_Chr4g0411601 RchiOBHm_Chr4g0422181 RchiOBHm_Chr5g0036661 RchiOBHm_Chr5g0036731 RchiOBHm_Chr6g0274021 RchiOBHm_Chr7g0190921 RchiOBHm_Chr7g0190931 RchiOBHm_Chr7g0190941 RchiOBHm_Chr7g0190951 RchiOBHm_Chr7g0190961 RchiOBHm_Chr7g0190971 RchiOBHm_Chr7g0191001 RchiOBHm_Chr7g0191011 RchiOBHm_Chr7g0191021 RchiOBHm_Chr7g0192181 RchiOBHm_Chr7g0192191 RchiOBHm_Chr7g0192201 RchiOBHm_Chr7g0192221 RchiOBHm_Chr7g0192231 RchiOBHm_Chr7g0192281 RchiOBHm_Chr7g0197311
rosa_laevigata	RLG00000003942 RLG00000004345 RLG00000004379 RLG00000004383 RLG00000004384 RLG00000004385 RLG00000004387 RLG00000004388 RLG00000004389 RLG00000004480 RLG00000004481 RLG00000004482 RLG00000004483 RLG00000004485 RLG00000008342 RLG00000008401 RLG00000013583 RLG00000017044 RLG00000027229 RLG00000028349 RLG00000028350 RLG00000028353 RLG00000028820 RLG00000033707 RLG00000033710
rosa_multiflora	Rmu_co8020340.1_g000001 Rmu_co8096640.1_g000001 Rmu_co8214930.1_g000001 Rmu_co8223272.1_g000001 Rmu_co8282535.1_g000001 Rmu_co8343567.1_g000001 Rmu_co8404191.1_g000001 Rmu_co8455157.1_g000001 Rmu_sc0000062.1_g000028 Rmu_sc0000082.1_g000091 Rmu_sc0000509.1_g000017 Rmu_sc0000775.1_g000001 Rmu_sc0000999.1_g000034 Rmu_sc0001559.1_g000004 Rmu_sc0001559.1_g000009 Rmu_sc0002164.1_g000001 Rmu_sc0002164.1_g000005 Rmu_sc0002164.1_g000007 Rmu_sc0002164.1_g000008 Rmu_sc0002164.1_g000009 Rmu_sc0002164.1_g000019 Rmu_sc0002247.1_g000009 Rmu_sc0002373.1_g000002 Rmu_sc0002373.1_g000003 Rmu_sc0002944.1_g000059 Rmu_sc0003930.1_g000004 Rmu_sc0004958.1_g000001 Rmu_sc0005197.1_g000014 Rmu_sc0005898.1_g000008 Rmu_sc0005898.1_g000009 Rmu_sc0005898.1_g000015 Rmu_sc0006059.1_g000004 Rmu_sc0006059.1_g000010 Rmu_sc0006903.1_g000007 Rmu_sc0006903.1_g000008 Rmu_sc0006968.1_g000001 Rmu_sc0011009.1_g000009 Rmu_sc0022852.1_g000002 Rmu_sc0033854.1_g000001 Rmu_ssc0000421.1_g000057 Rmu_ssc0000421.1_g000067 Rmu_ssc0000421.1_g000069 Rmu_ssc0000421.1_g000072 Rmu_ssc0000421.1_g000081 Rmu_ssc0000421.1_g000086
rosa_roxburghii	Rroxscaffold_158G00443680 Rroxscaffold_158G00443710 Rroxscaffold_158G00443720 Rroxscaffold_158G00443740 Rroxscaffold_1G00034950 Rroxscaffold_1G00044240 Rroxscaffold_1G00044270 Rroxscaffold_3G00241380 Rroxscaffold_3G00247000 Rroxscaffold_3G00263120 Rroxscaffold_3G00263150 Rroxscaffold_3G00263160 Rroxscaffold_3G00263170 Rroxscaffold_3G00263180 Rroxscaffold_3G00263190 Rroxscaffold_3G00263210 Rroxscaffold_3G00263230 Rroxscaffold_3G00263260 Rroxscaffold_3G00264110 Rroxscaffold_3G00264130 Rroxscaffold_3G00264160 Rroxscaffold_3G00264180 Rroxscaffold_3G00264200 Rroxscaffold_4G00288750 Rroxscaffold_4G00303110 Rroxscaffold_4G00303120 Rroxscaffold_4G00322280 Rroxscaffold_5G00356200 Rroxscaffold_6G00399150 Rroxscaffold_6G00399290 Rroxscaffold_7G00194770
rosa_rugosa	Rorug01G0225300 Rorug01G0225400 Rorug01G0225800 Rorug01G0226000 Rorug01G0339400 Rorug01G0451500 Rorug03G0196900 Rorug03G0294900 Rorug04G0107500 Rorug04G0107600 Rorug04G0129700 Rorug04G0178000 Rorug05G0144900.1 Rorug05G0145000 Rorug05G0228000 Rorug05G0228600 Rorug06G0078300 Rorug06G0508000 Rorug06G0508100 Rorug06G0508100 Rorug06G0508400 Rorug06G0513400 Rorug07G0000100 Rorug07G0000200 Rorug07G0000300 Rorug07G0000500 Rorug07G0000800
rosa_samantha	Rh1BG060400 Rh1BG210300 Rh1BG210700 Rh1BG210800 Rh1BG309800 Rh1CG223800 Rh1CG224200 Rh1CG325200 Rh1DG237000 Rh1DG237400 Rh1DG341600 Rh2DG365700 Rh3AG212500 Rh3AG248400 Rh3CG239800 Rh3DG239300 Rh4AG169300 Rh4BG166200 Rh4BG240500 Rh4BG240600 Rh4DG163600 Rh5AG249600 Rh5AG249900 Rh5AG250000 Rh5CG283100 Rh5CG283200 Rh5CG283400 Rh5DG259200 Rh5DG259800 Rh6BG197700 Rh6CG197800 Rh6DG189400 Rh7AG114900 Rh7AG115000 Rh7AG115200 Rh7AG115300 Rh7AG115400 Rh7AG115500 Rh7AG123900 Rh7AG124100 Rh7AG124300 Rh7BG117200 Rh7BG117400 Rh7BG118400 Rh7BG125400 Rh7BG125600 Rh7BG125700 Rh7BG125800 Rh7BG125900 Rh7BG126000 Rh7BG126400 Rh7BG126600 Rh7BG126700 Rh7BG166200 Rh7DG118600 Rh7DG118700 Rh7DG118900 Rh7DG119000 Rh7DG119100 Rh7DG127400 Rh7DG127600 Rh7DG127700 Rh7DG127900 Rh7DG128200
rosa_wichuraiana	Rw1G013270 Rw1G020790 Rw2G027890 Rw2G028040 Rw3G019240 Rw4G014070 Rw4G020540 Rw5G021320 Rw5G022970 Rw6G016920 Rw7G010020 Rw7G010040 Rw7G010580 Rw7G010590 Rw7G010600 Rw7G010610 Rw7G010620 Rw7G010630 Rw7G010640 Rw7G010690

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1326
AarI	CACCTGC	1 cut(s)	388
AatII	GACGTC	1 cut(s)	567
Acc36I	ACCTGC	1 cut(s)	388
AccB7I	CCANNNNNTGG	1 cut(s)	683
AccI	GTMKAC	1 cut(s)	1169
AccII	CGCG	2 cut(s)	183, 456
AciI	CCGC	5 cut(s)	5, 330, 456, 647, 877
AclWI	GGATC	5 cut(s)	474, 1244, 1378, 1379, 1391
AcoI	YGGCCR	1 cut(s)	264
AcsI	RAATTY	5 cut(s)	611, 632, 749, 870, 1423
AcuI	CTGAAG	1 cut(s)	774
AcyI	GRCGYC	1 cut(s)	564
AfaI	GTAC	6 cut(s)	39, 68, 97, 207, 596, 743
AfiI	CCNNNNNNNGG	2 cut(s)	137, 683
AgsI	TTSAA	6 cut(s)	191, 770, 869, 1000, 1105, 1264
AhlI	ACTAGT	1 cut(s)	721
AjiI	CACGTC	1 cut(s)	364
AjnI	CCWGG	1 cut(s)	1232
AluBI	AGCT	6 cut(s)	10, 343, 581, 622, 1361, 1556
AluI	AGCT	6 cut(s)	10, 343, 581, 622, 1361, 1556
Alw21I	GWGCWC	2 cut(s)	12, 624
Alw26I	GTCTC	4 cut(s)	262, 467, 574, 660
AlwI	GGATC	5 cut(s)	474, 1244, 1378, 1379, 1391
Ama87I	CYCGRG	5 cut(s)	162, 201, 276, 571, 1379
AoxI	GGCC	2 cut(s)	264, 817
ApeKI	GCWGC	4 cut(s)	272, 578, 801, 1429
ApoI	RAATTY	5 cut(s)	611, 632, 749, 870, 1423
ArsI	GACNNNNNNTTYG	2 cut(s)	290, 322
AspLEI	GCGC	4 cut(s)	161, 185, 376, 434
AspS9I	GGNCC	2 cut(s)	212, 447
AsuC2I	CCSGG	4 cut(s)	277, 278, 1380, 1381
AsuHPI	GGTGA	5 cut(s)	99, 140, 395, 412, 1237
AvaI	CYCGRG	5 cut(s)	162, 201, 276, 571, 1379
AvaII	GGWCC	2 cut(s)	212, 447
BamHI	GGATCC	1 cut(s)	1383
BanII	GRGCYC	2 cut(s)	12, 624
BarI	GAAGNNNNNNTAC	2 cut(s)	332, 364
BbsI	GAAGAC	2 cut(s)	69, 647
Bbv12I	GWGCWC	2 cut(s)	12, 624
BbvI	GCAGC	4 cut(s)	259, 590, 813, 1416
BccI	CCATC	3 cut(s)	140, 186, 599
BceAI	ACGGC	3 cut(s)	32, 681, 1517
BciT130I	CCWGG	1 cut(s)	1234
BciVI	GTATCC	1 cut(s)	751
BclI	TGATCA	3 cut(s)	486, 811, 826
BcnI	CCSGG	4 cut(s)	277, 278, 1380, 1381
BcoDI	GTCTC	4 cut(s)	262, 467, 574, 660
BcuI	ACTAGT	1 cut(s)	721
BfaI	CTAG	6 cut(s)	155, 584, 722, 798, 974, 1418
BfoI	RGCGCY	2 cut(s)	162, 435
BfuAI	ACCTGC	1 cut(s)	388
BfuI	GTATCC	1 cut(s)	751
BisI	GCNGC	6 cut(s)	273, 457, 579, 802, 878, 1430
BlsI	GCNGC	6 cut(s)	274, 458, 580, 803, 879, 1431
Bme1390I	CCNGG	5 cut(s)	277, 278, 1234, 1380, 1381
Bme18I	GGWCC	2 cut(s)	212, 447
BmeT110I	CYCGRG	5 cut(s)	162, 201, 276, 571, 1379
BmgBI	CACGTC	1 cut(s)	364
BmgT120I	GGNCC	2 cut(s)	212, 447
BmiI	GGNNCC	1 cut(s)	1385
BmrFI	CCNGG	5 cut(s)	277, 278, 1234, 1380, 1381
BmsI	GCATC	1 cut(s)	531
BoxI	GACNNNNGTC	1 cut(s)	322
BpiI	GAAGAC	2 cut(s)	69, 647
BplI	GAGNNNNNCTC	2 cut(s)	565, 597
BpmI	CTGGAG	1 cut(s)	412
BpuEI	CTTGAG	2 cut(s)	448, 1158
BpuMI	CCSGG	4 cut(s)	277, 278, 1380, 1381
BsaHI	GRCGYC	1 cut(s)	564
BsaI	GGTCTC	1 cut(s)	467
BsaJI	CCNNGG	6 cut(s)	267, 276, 677, 1007, 1379, 1533
BsaWI	WCCGGW	1 cut(s)	1454
BsaXI	ACNNNNNCTCC	6 cut(s)	111, 141, 510, 540, 1360, 1390
Bsc4I	CCNNNNNNNGG	2 cut(s)	137, 683
Bse1I	ACTGG	4 cut(s)	90, 395, 1342, 1387
Bse3DI	GCAATG	1 cut(s)	990
BseBI	CCWGG	1 cut(s)	1234
BseDI	CCNNGG	6 cut(s)	267, 276, 677, 1007, 1379, 1533
BseGI	GGATG	4 cut(s)	57, 862, 1084, 1135
BseLI	CCNNNNNNNGG	2 cut(s)	137, 683
BseMI	GCAATG	1 cut(s)	990
BseMII	CTCAG	1 cut(s)	1065
BseNI	ACTGG	4 cut(s)	90, 395, 1342, 1387
BseRI	GAGGAG	3 cut(s)	215, 485, 534
BseX3I	CGGCCG	1 cut(s)	264
BseXI	GCAGC	4 cut(s)	259, 590, 813, 1416
BseYI	CCCAGC	1 cut(s)	947
BsgI	GTGCAG	1 cut(s)	1415
Bsh1236I	CGCG	2 cut(s)	183, 456
Bsh1285I	CGRYCG	1 cut(s)	267
BshFI	GGCC	2 cut(s)	266, 819
BsiEI	CGRYCG	1 cut(s)	267
BsiHKAI	GWGCWC	2 cut(s)	12, 624
BsiHKCI	CYCGRG	5 cut(s)	162, 201, 276, 571, 1379
BsiSI	CCGG	4 cut(s)	277, 1289, 1380, 1455
BslFI	GGGAC	4 cut(s)	227, 964, 1345, 1362
BslI	CCNNNNNNNGG	2 cut(s)	137, 683
BsmAI	GTCTC	4 cut(s)	262, 467, 574, 660
BsmBI	CGTCTC	1 cut(s)	574
BsmFI	GGGAC	4 cut(s)	227, 964, 1345, 1362
BsmI	GAATGC	2 cut(s)	305, 1234
BsnI	GGCC	2 cut(s)	266, 819
Bso31I	GGTCTC	1 cut(s)	467
BsoBI	CYCGRG	5 cut(s)	162, 201, 276, 571, 1379
Bsp1286I	GDGCHC	2 cut(s)	12, 624
Bsp1407I	TGTACA	1 cut(s)	66
Bsp143I	GATC	9 cut(s)	282, 479, 486, 811, 826, 1239, 1249, 1371, 1383
Bsp19I	CCATGG	1 cut(s)	677
BspACI	CCGC	5 cut(s)	5, 330, 456, 647, 877
BspANI	GGCC	2 cut(s)	266, 819
BspCNI	CTCAG	1 cut(s)	1066
BspFNI	CGCG	2 cut(s)	183, 456
BspHI	TCATGA	3 cut(s)	285, 295, 1014
BspLI	GGNNCC	1 cut(s)	1385
BspMI	ACCTGC	1 cut(s)	388
BspPI	GGATC	5 cut(s)	474, 1244, 1378, 1379, 1391
BspQI	GCTCTTC	2 cut(s)	398, 1131
BspTNI	GGTCTC	1 cut(s)	467
BsrDI	GCAATG	1 cut(s)	990
BsrGI	TGTACA	1 cut(s)	66
BsrI	ACTGG	4 cut(s)	90, 395, 1342, 1387
BssECI	CCNNGG	6 cut(s)	267, 276, 677, 1007, 1379, 1533
BssMI	GATC	9 cut(s)	282, 479, 486, 811, 826, 1239, 1249, 1371, 1383
BssNI	GRCGYC	1 cut(s)	564
BssT1I	CCWWGG	2 cut(s)	677, 1007
Bst2UI	CCWGG	1 cut(s)	1234
Bst4CI	ACNGT	5 cut(s)	383, 741, 763, 1193, 1402
Bst6I	CTCTTC	4 cut(s)	398, 462, 1131, 1272
BstACI	GRCGYC	1 cut(s)	564
BstAPI	GCANNNNNTGC	1 cut(s)	886
BstAUI	TGTACA	1 cut(s)	66
BstC8I	GCNNGC	3 cut(s)	313, 416, 1363
BstDEI	CTNAG	3 cut(s)	321, 1074, 1319
BstDSI	CCRYGG	2 cut(s)	677, 1533
BstF5I	GGATG	4 cut(s)	57, 862, 1084, 1135
BstFNI	CGCG	2 cut(s)	183, 456
BstH2I	RGCGCY	2 cut(s)	162, 435
BstHHI	GCGC	4 cut(s)	161, 185, 376, 434
BstKTI	GATC	9 cut(s)	285, 482, 489, 814, 829, 1242, 1252, 1374, 1386
BstMAI	GTCTC	4 cut(s)	262, 467, 574, 660
BstMBI	GATC	9 cut(s)	282, 479, 486, 811, 826, 1239, 1249, 1371, 1383
BstMCI	CGRYCG	1 cut(s)	267
BstMWI	GCNNNNNNNGC	5 cut(s)	191, 272, 550, 772, 886
BstNI	CCWGG	1 cut(s)	1234
BstPAI	GACNNNNGTC	1 cut(s)	322
BstSCI	CCNGG	5 cut(s)	275, 276, 1232, 1378, 1379
BstUI	CGCG	2 cut(s)	183, 456
BstV1I	GCAGC	4 cut(s)	259, 590, 813, 1416
BstV2I	GAAGAC	2 cut(s)	69, 647
BstX2I	RGATCY	4 cut(s)	479, 1249, 1371, 1383
BstXI	CCANNNNNNTGG	1 cut(s)	605
BstYI	RGATCY	4 cut(s)	479, 1249, 1371, 1383
BstZI	CGGCCG	1 cut(s)	264
BsuI	GTATCC	1 cut(s)	751
BsuRI	GGCC	2 cut(s)	266, 819
BtgI	CCRYGG	2 cut(s)	677, 1533
BtgZI	GCGATG	1 cut(s)	164
BtrI	CACGTC	1 cut(s)	364
BtsCI	GGATG	4 cut(s)	57, 862, 1084, 1135
BtsI	GCAGTG	1 cut(s)	1116
BtsIMutI	CAGTG	1 cut(s)	1116
BveI	ACCTGC	1 cut(s)	388
Cac8I	GCNNGC	3 cut(s)	313, 416, 1363
CciI	TCATGA	3 cut(s)	285, 295, 1014
CfoI	GCGC	4 cut(s)	161, 185, 376, 434
Cfr13I	GGNCC	2 cut(s)	212, 447
Cfr9I	CCCGGG	2 cut(s)	276, 1379
CseI	GACGC	3 cut(s)	229, 559, 722
Csp6I	GTAC	6 cut(s)	38, 67, 96, 206, 595, 742
CviAII	CATG	9 cut(s)	209, 220, 286, 296, 484, 659, 678, 1015, 1483
CviQI	GTAC	6 cut(s)	38, 67, 96, 206, 595, 742
DdeI	CTNAG	3 cut(s)	321, 1074, 1319
DpnI	GATC	9 cut(s)	284, 481, 488, 813, 828, 1241, 1251, 1373, 1385
DpnII	GATC	9 cut(s)	282, 479, 486, 811, 826, 1239, 1249, 1371, 1383
EaeI	YGGCCR	1 cut(s)	264
EagI	CGGCCG	1 cut(s)	264
Eam1104I	CTCTTC	4 cut(s)	398, 462, 1131, 1272
EarI	CTCTTC	4 cut(s)	398, 462, 1131, 1272
EciI	GGCGGA	1 cut(s)	20
Ecl136II	GAGCTC	2 cut(s)	10, 622
EclXI	CGGCCG	1 cut(s)	264
Eco130I	CCWWGG	2 cut(s)	677, 1007
Eco147I	AGGCCT	1 cut(s)	819
Eco24I	GRGCYC	2 cut(s)	12, 624
Eco31I	GGTCTC	1 cut(s)	467
Eco47I	GGWCC	2 cut(s)	212, 447
Eco52I	CGGCCG	1 cut(s)	264
Eco53kI	GAGCTC	2 cut(s)	10, 622
Eco57I	CTGAAG	1 cut(s)	774
Eco88I	CYCGRG	5 cut(s)	162, 201, 276, 571, 1379
EcoICRI	GAGCTC	2 cut(s)	10, 622
EcoRII	CCWGG	1 cut(s)	1232
EcoT14I	CCWWGG	2 cut(s)	677, 1007
EcoT38I	GRGCYC	2 cut(s)	12, 624
ErhI	CCWWGG	2 cut(s)	677, 1007
Esp3I	CGTCTC	1 cut(s)	574
FaeI	CATG	9 cut(s)	212, 223, 289, 299, 487, 662, 681, 1018, 1486
FaqI	GGGAC	4 cut(s)	227, 964, 1345, 1362
FatI	CATG	9 cut(s)	208, 219, 285, 295, 483, 658, 677, 1014, 1482
FauI	CCCGC	1 cut(s)	640
FauNDI	CATATG	1 cut(s)	410
FbaI	TGATCA	3 cut(s)	486, 811, 826
FblI	GTMKAC	1 cut(s)	1169
Fnu4HI	GCNGC	6 cut(s)	273, 457, 579, 802, 878, 1430
FokI	GGATG	4 cut(s)	44, 869, 1091, 1122
FriOI	GRGCYC	2 cut(s)	12, 624
Fsp4HI	GCNGC	6 cut(s)	273, 457, 579, 802, 878, 1430
FspBI	CTAG	6 cut(s)	155, 584, 722, 798, 974, 1418
GlaI	GCGC	4 cut(s)	160, 184, 375, 433
GluI	GCNGC	6 cut(s)	273, 457, 579, 802, 878, 1430
GsaI	CCCAGC	1 cut(s)	951
GsuI	CTGGAG	1 cut(s)	412
HaeII	RGCGCY	2 cut(s)	162, 435
HaeIII	GGCC	2 cut(s)	266, 819
HapII	CCGG	4 cut(s)	277, 1289, 1380, 1455
HgaI	GACGC	3 cut(s)	229, 559, 722
HhaI	GCGC	4 cut(s)	161, 185, 376, 434
Hin1I	GRCGYC	1 cut(s)	564
Hin1II	CATG	9 cut(s)	212, 223, 289, 299, 487, 662, 681, 1018, 1486
Hin6I	GCGC	4 cut(s)	159, 183, 374, 432
HinP1I	GCGC	4 cut(s)	159, 183, 374, 432
HincII	GTYRAC	1 cut(s)	1170
HindII	GTYRAC	1 cut(s)	1170
HindIII	AAGCTT	1 cut(s)	341
HinfI	GANTC	4 cut(s)	421, 1171, 1256, 1490
HpaII	CCGG	4 cut(s)	277, 1289, 1380, 1455
HphI	GGTGA	5 cut(s)	99, 140, 395, 412, 1237
Hpy166II	GTNNAC	3 cut(s)	327, 529, 1170
Hpy188I	TCNGA	5 cut(s)	140, 236, 793, 831, 1358
Hpy8I	GTNNAC	3 cut(s)	327, 529, 1170
Hpy99I	CGWCG	4 cut(s)	47, 265, 566, 569
HpyAV	CCTTC	5 cut(s)	123, 155, 343, 433, 1099
HpyCH4III	ACNGT	5 cut(s)	383, 741, 763, 1193, 1402
HpyCH4IV	ACGT	4 cut(s)	363, 506, 531, 564
HpyCH4V	TGCA	3 cut(s)	1027, 1096, 1432
HpyF10VI	GCNNNNNNNGC	5 cut(s)	191, 272, 550, 772, 886
HpyF3I	CTNAG	3 cut(s)	321, 1074, 1319
HpySE526I	ACGT	4 cut(s)	363, 506, 531, 564
Hsp92I	GRCGYC	1 cut(s)	564
Hsp92II	CATG	9 cut(s)	212, 223, 289, 299, 487, 662, 681, 1018, 1486
HspAI	GCGC	4 cut(s)	159, 183, 374, 432
Ksp22I	TGATCA	3 cut(s)	486, 811, 826
Kzo9I	GATC	9 cut(s)	282, 479, 486, 811, 826, 1239, 1249, 1371, 1383
LguI	GCTCTTC	2 cut(s)	398, 1131
LmnI	GCTCC	4 cut(s)	7, 228, 619, 1358
Lsp1109I	GCAGC	4 cut(s)	259, 590, 813, 1416
LweI	GCATC	1 cut(s)	531
MaeI	CTAG	6 cut(s)	155, 584, 722, 798, 974, 1418
MaeII	ACGT	4 cut(s)	363, 506, 531, 564
MaeIII	GTNAC	1 cut(s)	507
MalI	GATC	9 cut(s)	284, 481, 488, 813, 828, 1241, 1251, 1373, 1385
MboI	GATC	9 cut(s)	282, 479, 486, 811, 826, 1239, 1249, 1371, 1383
MflI	RGATCY	4 cut(s)	479, 1249, 1371, 1383
MhlI	GDGCHC	2 cut(s)	12, 624
MlyI	GAGTC	1 cut(s)	1165
MmeI	TCCRAC	1 cut(s)	643
MseI	TTAA	8 cut(s)	615, 671, 1070, 1116, 1203, 1502, 1527, 1558
MslI	CAYNNNNRTG	2 cut(s)	413, 603
MspA1I	CMGCKG	1 cut(s)	877
MspI	CCGG	4 cut(s)	277, 1289, 1380, 1455
MspR9I	CCNGG	5 cut(s)	277, 278, 1234, 1380, 1381
Mva1269I	GAATGC	2 cut(s)	305, 1234
MvaI	CCWGG	1 cut(s)	1234
MvnI	CGCG	2 cut(s)	183, 456
MwoI	GCNNNNNNNGC	5 cut(s)	191, 272, 550, 772, 886
NciI	CCSGG	4 cut(s)	277, 278, 1380, 1381
NcoI	CCATGG	1 cut(s)	677
NdeI	CATATG	1 cut(s)	410
NdeII	GATC	9 cut(s)	282, 479, 486, 811, 826, 1239, 1249, 1371, 1383
NlaIII	CATG	9 cut(s)	212, 223, 289, 299, 487, 662, 681, 1018, 1486
NlaIV	GGNNCC	1 cut(s)	1385
NmeAIII	GCCGAG	1 cut(s)	292
NmuCI	GTSAC	1 cut(s)	507
PaeR7I	CTCGAG	3 cut(s)	162, 201, 571
PagI	TCATGA	3 cut(s)	285, 295, 1014
PaqCI	CACCTGC	1 cut(s)	388
PceI	AGGCCT	1 cut(s)	819
PciSI	GCTCTTC	2 cut(s)	398, 1131
PctI	GAATGC	2 cut(s)	305, 1234
PfeI	GAWTC	3 cut(s)	421, 1256, 1490
PflFI	GACNNNGTC	1 cut(s)	566
PflMI	CCANNNNNTGG	1 cut(s)	683
PkrI	GCNGC	6 cut(s)	274, 458, 580, 803, 879, 1431
PleI	GAGTC	1 cut(s)	1165
PpsI	GAGTC	1 cut(s)	1165
PshAI	GACNNNNGTC	1 cut(s)	322
PsiI	TTATAA	1 cut(s)	1326
Psp124BI	GAGCTC	2 cut(s)	12, 624
Psp6I	CCWGG	1 cut(s)	1232
PspFI	CCCAGC	1 cut(s)	947
PspGI	CCWGG	1 cut(s)	1232
PspN4I	GGNNCC	1 cut(s)	1385
PspPI	GGNCC	2 cut(s)	212, 447
PspXI	VCTCGAGB	1 cut(s)	162
PsuI	RGATCY	4 cut(s)	479, 1249, 1371, 1383
PsyI	GACNNNGTC	1 cut(s)	566
RsaI	GTAC	6 cut(s)	39, 68, 97, 207, 596, 743
RsaNI	GTAC	6 cut(s)	38, 67, 96, 206, 595, 742
RseI	CAYNNNNRTG	2 cut(s)	413, 603
SacI	GAGCTC	2 cut(s)	12, 624
SalI	GTCGAC	1 cut(s)	1168
SapI	GCTCTTC	2 cut(s)	398, 1131
SaqAI	TTAA	8 cut(s)	615, 671, 1070, 1116, 1203, 1502, 1527, 1558
SatI	GCNGC	6 cut(s)	273, 457, 579, 802, 878, 1430
Sau3AI	GATC	9 cut(s)	282, 479, 486, 811, 826, 1239, 1249, 1371, 1383
Sau96I	GGNCC	2 cut(s)	212, 447
SchI	GAGTC	1 cut(s)	1165
ScrFI	CCNGG	5 cut(s)	277, 278, 1234, 1380, 1381
SduI	GDGCHC	2 cut(s)	12, 624
SfaNI	GCATC	1 cut(s)	531
Sfr274I	CTCGAG	3 cut(s)	162, 201, 571
SinI	GGWCC	2 cut(s)	212, 447
SlaI	CTCGAG	3 cut(s)	162, 201, 571
SmaI	CCCGGG	2 cut(s)	278, 1381
SmiMI	CAYNNNNRTG	2 cut(s)	413, 603
SmlI	CTYRAG	5 cut(s)	162, 201, 427, 571, 1173
SmoI	CTYRAG	5 cut(s)	162, 201, 427, 571, 1173
SpeI	ACTAGT	1 cut(s)	721
SseBI	AGGCCT	1 cut(s)	819
SsiI	CCGC	5 cut(s)	5, 330, 456, 647, 877
SspI	AATATT	1 cut(s)	1068
SspMI	CTAG	6 cut(s)	155, 584, 722, 798, 974, 1418
SstI	GAGCTC	2 cut(s)	12, 624
StuI	AGGCCT	1 cut(s)	819
StyD4I	CCNGG	5 cut(s)	275, 276, 1232, 1378, 1379
StyI	CCWWGG	2 cut(s)	677, 1007
TaaI	ACNGT	5 cut(s)	383, 741, 763, 1193, 1402
TaiI	ACGT	4 cut(s)	366, 509, 534, 567
TaqI	TCGA	5 cut(s)	163, 202, 336, 572, 1169
TaqII	GACCGA	1 cut(s)	435
TatI	WGTACW	3 cut(s)	37, 66, 205
TauI	GCSGC	2 cut(s)	459, 880
TfiI	GAWTC	3 cut(s)	421, 1256, 1490
Tru1I	TTAA	8 cut(s)	615, 671, 1070, 1116, 1203, 1502, 1527, 1558
Tru9I	TTAA	8 cut(s)	615, 671, 1070, 1116, 1203, 1502, 1527, 1558
TscAI	CASTG	1 cut(s)	1116
TseFI	GTSAC	1 cut(s)	507
TseI	GCWGC	4 cut(s)	272, 578, 801, 1429
Tsp45I	GTSAC	1 cut(s)	507
TspDTI	ATGAA	6 cut(s)	36, 302, 647, 762, 1499, 1539
TspGWI	ACGGA	1 cut(s)	653
TspMI	CCCGGG	2 cut(s)	276, 1379
TspRI	CASTG	1 cut(s)	1116
Tth111I	GACNNNGTC	1 cut(s)	566
Van91I	CCANNNNNTGG	1 cut(s)	683
VpaK11BI	GGWCC	2 cut(s)	212, 447
XapI	RAATTY	5 cut(s)	611, 632, 749, 870, 1423
XbaI	TCTAGA	1 cut(s)	973
XcmI	CCANNNNNNNNNTGG	1 cut(s)	684
XhoI	CTCGAG	3 cut(s)	162, 201, 571
XmaI	CCCGGG	2 cut(s)	276, 1379
XmiI	GTMKAC	1 cut(s)	1169
XspI	CTAG	6 cut(s)	155, 584, 722, 798, 974, 1418
ZraI	GACGTC	1 cut(s)	565

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.