Rw1G020790

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
Physical Location & Seq
Forward (+)
44493274 .. 44498799
5526 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G020790.1

Sequence Viewer

Length: 1521 bp
ATGTCAAATCTCCTGCAAATTCTGGAACTAAAACTGAACGAAACCTCAATCTTCTGGCAACTCTTTTCGCCCAACTATGTACCACTTCTCACCATTTCCTTTTCCTCCTATACAAATGTTTCAGTACCACCATCTCCACCAAAGCTTCCTGTGATCGGAAACCTCCACCGGCTAGGGTTACTCCCTCACCGCTCTCTTCAAACTCTAGCGCAACACCATGGGCCTGATCTAATGCTACTCCATCTCAGAAGCAGGCCGGTGATTGTTGTCTCAACAGCTGAGGCTGCCTCCGAGATCTTCAAAACCCATGACCAAGGTTTTAAATATAGACCCAAGTTTGTCTTCTTTCAGAAGGTTCTCTACAATTACAAGGACATAGTATCGGCACCTTATGGTGAGTATTGGAGGCAGATGAGAAGTGTCTGTGTCTTAAATCTTTTGAGCAACAAAAGGGTTCGTTCTTTTGGCACCGTGAGACTAGAGGAAACGATACTCATGATGAGCAACAAAGAACAGTCTTGTAGGGAGACATCTTCCTCCTCCTCATCAACATCGTCGGTTTTAAATTTAAGCGATATGTTTATGAAGCTTACTAATGTTGTCATTTGTAGAGTTGCTATGGGTAGGAAGTACAGTGATCTCGGAGAAGGTCGTGGGAGGTTGTTTATGGATCTTTCTGTAGAGCTGATAGAGTTCTTCACAAGGGTCAATATTGGTGACTATATCCCATGGCTAGCTTGGTTCACCCGTGTGAATGAGCATATGGATAAATCAAAAAATTTAAATGATGATGATAATGAGAACGAAAAGCATTTGGTAGATGTTTTGCTTTGGGTTCAAAAAGAAAATGCAGTTGGTTTTCCTATTGATCGTGTTAGCATAAAGGCCATCATCCTGGATCTGTTTTCCGGTGCCACTGATGCCATATTTGCTGCCCCGGAGTGGACAATGTCTGAACTTCCAAGGAATCCAAGAGTGATGAAGAATTTGCAAGATGAAGTTAGGAGGATAGTCGGAAATGAAAAGGACGTAACAGAGAATGATTTGCCAGAAATTCGCTTTTTGAGCCTCAGGGCGCACTTTTTAATTCATTGGAATGCACTACTTGAAGGCAATGACCAAAGAGACCTTTCGATTACATCCTCCAGTTCCATTGCTATTGCCCAAGATGTGAAAATAAAAGGTTACGAGATCAAGGCTAATACACAAGTTATGGTTAATGCATGGGCGCTTGGAAGAGACCCTAAATTTTTAGACAATGCCATAGACTATAAAGGGAATAACTTCGAACTAATTTCATTTGGGGCTGGGAGACGGGGTTGCCTGGGAATTCAGTTTGCAATGGTTGTTAAAGAGCTTGCTTTGGCAAACATTTTGCATAAGTTCGATTGGGCTTTGCCTCATGGTACAACAGGGGAAGACTTAGACATGACTGAAACCACTGGAGCAACCGCACACAGAAAGTATCCTCTAAAGGCAGTGGCAACTCTATTTCATCCTAAAAGAGATTCTTCTTTTTAG

Protein Analysis

506

Amino Acids

57.51

Weight (kDa)

8.19

Isoelectric Point (pI)

37.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 43 - 355 9.9e-31 Cytochrome P450
p450 PF00067 387 - 481 3.4e-19 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000061)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G48270 AT3G48280 AT3G48290 AT3G48290 AT3G48300 AT3G48300 AT3G48310 AT3G48320 AT4G20235 AT4G20235
fragaria_vesca FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g36190 FvH4_3g14160 FvH4_3g14210 FvH4_3g14260 FvH4_3g14260 FvH4_3g21100 FvH4_3g21380 FvH4_4g24460 FvH4_4g24500 FvH4_5g06571 FvH4_5g06571 FvH4_5g06571 FvH4_5g06571 FvH4_5g06572 FvH4_5g06573 FvH4_5g06574 FvH4_5g06575 FvH4_5g06576 FvH4_5g06577 FvH4_5g06577 FvH4_5g07540 FvH4_5g07550 FvH4_5g07560 FvH4_5g07570 FvH4_5g29491 FvH4_5g29492 FvH4_6g23870 FvH4_6g23880 FvH4_6g26870 FvH4_7g11861 FvH4_7g11862 FvH4_7g13050 FvH4_7g13060 FvH4_7g13080 FvH4_7g13080 FvH4_7g22630 FvH4_7g22650 FvH4_7g22651 FvH4_7g23020
malus_domestica MD03G1207400.v1.1 MD03G1214800.v1.1 MD03G1218500.v1.1 MD06G1163100.v1.1 MD06G1163300.v1.1 MD06G1163400.v1.1 MD06G1163500.v1.1 MD06G1163600.v1.1 MD06G1163800.v1.1 MD06G1164000.v1.1 MD06G1164100.v1.1 MD06G1224400.v1.1 MD08G1222800.v1.1 MD08G1222900.v1.1 MD08G1223100.v1.1 MD11G1091500.v1.1 MD11G1091800.v1.1 MD14G1163200.v1.1 MD14G1169000.v1.1 MD15G1207200.v1.1 MD15G1207300.v1.1 MD17G1259400.v1.1
prunus_persica Prupe.4G198100_v2.0.a1 Prupe.4G199100_v2.0.a1 Prupe.4G199400_v2.0.a1 Prupe.4G199800_v2.0.a1 Prupe.4G225200_v2.0.a1 Prupe.4G239100_v2.0.a1 Prupe.5G156600_v2.0.a1 Prupe.5G163500_v2.0.a1 Prupe.7G209500_v2.0.a1 Prupe.I003400_v2.0.a1
pyrus_communis pycom03g16340 pycom06g14600 pycom06g14610 pycom06g14620 pycom06g14630 pycom06g14640 pycom06g14670 pycom06g14690 pycom08g19390 pycom08g19400 pycom08g19410 pycom11g07600 pycom11g07610 pycom11g07620 pycom11g07660 pycom14g13580 pycom14g14080 pycom14g14100 pycom14g14110 pycom15g18380 pycom17g26080
rosa_chinensis RchiOBHm_Chr1g0339441 RchiOBHm_Chr1g0339451 RchiOBHm_Chr1g0352191 RchiOBHm_Chr1g0368221 RchiOBHm_Chr2g0129531 RchiOBHm_Chr2g0129541 RchiOBHm_Chr3g0477631 RchiOBHm_Chr3g0482551 RchiOBHm_Chr3g0482561 RchiOBHm_Chr3g0482571 RchiOBHm_Chr4g0411601 RchiOBHm_Chr4g0422181 RchiOBHm_Chr5g0036661 RchiOBHm_Chr5g0036731 RchiOBHm_Chr6g0274021 RchiOBHm_Chr7g0190921 RchiOBHm_Chr7g0190931 RchiOBHm_Chr7g0190941 RchiOBHm_Chr7g0190951 RchiOBHm_Chr7g0190961 RchiOBHm_Chr7g0190971 RchiOBHm_Chr7g0191001 RchiOBHm_Chr7g0191011 RchiOBHm_Chr7g0191021 RchiOBHm_Chr7g0192181 RchiOBHm_Chr7g0192191 RchiOBHm_Chr7g0192201 RchiOBHm_Chr7g0192221 RchiOBHm_Chr7g0192231 RchiOBHm_Chr7g0192281 RchiOBHm_Chr7g0197311
rosa_laevigata RLG00000003942 RLG00000004345 RLG00000004379 RLG00000004383 RLG00000004384 RLG00000004385 RLG00000004387 RLG00000004388 RLG00000004389 RLG00000004480 RLG00000004481 RLG00000004482 RLG00000004483 RLG00000004485 RLG00000008342 RLG00000008401 RLG00000013583 RLG00000017044 RLG00000027229 RLG00000028349 RLG00000028350 RLG00000028353 RLG00000028820 RLG00000033707 RLG00000033710
rosa_multiflora Rmu_co8020340.1_g000001 Rmu_co8096640.1_g000001 Rmu_co8214930.1_g000001 Rmu_co8223272.1_g000001 Rmu_co8282535.1_g000001 Rmu_co8343567.1_g000001 Rmu_co8404191.1_g000001 Rmu_co8455157.1_g000001 Rmu_sc0000062.1_g000028 Rmu_sc0000082.1_g000091 Rmu_sc0000509.1_g000017 Rmu_sc0000775.1_g000001 Rmu_sc0000999.1_g000034 Rmu_sc0001559.1_g000004 Rmu_sc0001559.1_g000009 Rmu_sc0002164.1_g000001 Rmu_sc0002164.1_g000005 Rmu_sc0002164.1_g000007 Rmu_sc0002164.1_g000008 Rmu_sc0002164.1_g000009 Rmu_sc0002164.1_g000019 Rmu_sc0002247.1_g000009 Rmu_sc0002373.1_g000002 Rmu_sc0002373.1_g000003 Rmu_sc0002944.1_g000059 Rmu_sc0003930.1_g000004 Rmu_sc0004958.1_g000001 Rmu_sc0005197.1_g000014 Rmu_sc0005898.1_g000008 Rmu_sc0005898.1_g000009 Rmu_sc0005898.1_g000015 Rmu_sc0006059.1_g000004 Rmu_sc0006059.1_g000010 Rmu_sc0006903.1_g000007 Rmu_sc0006903.1_g000008 Rmu_sc0006968.1_g000001 Rmu_sc0011009.1_g000009 Rmu_sc0022852.1_g000002 Rmu_sc0033854.1_g000001 Rmu_ssc0000421.1_g000057 Rmu_ssc0000421.1_g000067 Rmu_ssc0000421.1_g000069 Rmu_ssc0000421.1_g000072 Rmu_ssc0000421.1_g000081 Rmu_ssc0000421.1_g000086
rosa_roxburghii Rroxscaffold_158G00443680 Rroxscaffold_158G00443710 Rroxscaffold_158G00443720 Rroxscaffold_158G00443740 Rroxscaffold_1G00034950 Rroxscaffold_1G00044240 Rroxscaffold_1G00044270 Rroxscaffold_3G00241380 Rroxscaffold_3G00247000 Rroxscaffold_3G00263120 Rroxscaffold_3G00263150 Rroxscaffold_3G00263160 Rroxscaffold_3G00263170 Rroxscaffold_3G00263180 Rroxscaffold_3G00263190 Rroxscaffold_3G00263210 Rroxscaffold_3G00263230 Rroxscaffold_3G00263260 Rroxscaffold_3G00264110 Rroxscaffold_3G00264130 Rroxscaffold_3G00264160 Rroxscaffold_3G00264180 Rroxscaffold_3G00264200 Rroxscaffold_4G00288750 Rroxscaffold_4G00303110 Rroxscaffold_4G00303120 Rroxscaffold_4G00322280 Rroxscaffold_5G00356200 Rroxscaffold_6G00399150 Rroxscaffold_6G00399290 Rroxscaffold_7G00194770
rosa_rugosa Rorug01G0225300 Rorug01G0225400 Rorug01G0225800 Rorug01G0226000 Rorug01G0339400 Rorug01G0451500 Rorug03G0196900 Rorug03G0294900 Rorug04G0107500 Rorug04G0107600 Rorug04G0129700 Rorug04G0178000 Rorug05G0144900.1 Rorug05G0145000 Rorug05G0228000 Rorug05G0228600 Rorug06G0078300 Rorug06G0508000 Rorug06G0508100 Rorug06G0508100 Rorug06G0508400 Rorug06G0513400 Rorug07G0000100 Rorug07G0000200 Rorug07G0000300 Rorug07G0000500 Rorug07G0000800
rosa_samantha Rh1BG060400 Rh1BG210300 Rh1BG210700 Rh1BG210800 Rh1BG309800 Rh1CG223800 Rh1CG224200 Rh1CG325200 Rh1DG237000 Rh1DG237400 Rh1DG341600 Rh2DG365700 Rh3AG212500 Rh3AG248400 Rh3CG239800 Rh3DG239300 Rh4AG169300 Rh4BG166200 Rh4BG240500 Rh4BG240600 Rh4DG163600 Rh5AG249600 Rh5AG249900 Rh5AG250000 Rh5CG283100 Rh5CG283200 Rh5CG283400 Rh5DG259200 Rh5DG259800 Rh6BG197700 Rh6CG197800 Rh6DG189400 Rh7AG114900 Rh7AG115000 Rh7AG115200 Rh7AG115300 Rh7AG115400 Rh7AG115500 Rh7AG123900 Rh7AG124100 Rh7AG124300 Rh7BG117200 Rh7BG117400 Rh7BG118400 Rh7BG125400 Rh7BG125600 Rh7BG125700 Rh7BG125800 Rh7BG125900 Rh7BG126000 Rh7BG126400 Rh7BG126600 Rh7BG126700 Rh7BG166200 Rh7DG118600 Rh7DG118700 Rh7DG118900 Rh7DG119000 Rh7DG119100 Rh7DG127400 Rh7DG127600 Rh7DG127700 Rh7DG127900 Rh7DG128200
rosa_wichuraiana Rw1G013270 Rw1G020790 Rw2G027890 Rw2G028040 Rw3G019240 Rw4G014070 Rw4G020540 Rw5G021320 Rw5G022970 Rw6G016920 Rw7G010020 Rw7G010040 Rw7G010580 Rw7G010590 Rw7G010600 Rw7G010610 Rw7G010620 Rw7G010630 Rw7G010640 Rw7G010690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 3 cut(s) 385, 467, 911
AccBSI CCGCTC 1 cut(s) 192
AciI CCGC 2 cut(s) 190, 1452
AclWI GGATC 2 cut(s) 678, 906
AcsI RAATTY 7 cut(s) 18, 565, 778, 985, 1053, 1247, 1329
AfaI GTAC 4 cut(s) 81, 126, 632, 1408
AfiI CCNNNNNNNGG 2 cut(s) 155, 942
AgsI TTSAA 4 cut(s) 200, 301, 839, 1109
AjnI CCWGG 2 cut(s) 894, 1323
AjuI GAANNNNNNNTTGG 4 cut(s) 326, 358, 837, 869
AleI CACNNNNGTG 1 cut(s) 749
AluBI AGCT 6 cut(s) 145, 278, 589, 685, 737, 1357
AluI AGCT 6 cut(s) 145, 278, 589, 685, 737, 1357
Alw26I GTCTC 6 cut(s) 274, 469, 521, 1119, 1233, 1306
AlwI GGATC 2 cut(s) 678, 906
AoxI GGCC 3 cut(s) 221, 254, 885
ApeKI GCWGC 2 cut(s) 284, 932
ApoI RAATTY 7 cut(s) 18, 565, 778, 985, 1053, 1247, 1329
Asp700I GAANNNNTTC 1 cut(s) 1283
AspLEI GCGC 3 cut(s) 211, 1078, 1231
AspS9I GGNCC 1 cut(s) 221
AsuC2I CCSGG 1 cut(s) 938
AsuHPI GGTGA 6 cut(s) 82, 179, 271, 407, 728, 736
AsuII TTCGAA 1 cut(s) 1287
AsuNHI GCTAGC 1 cut(s) 733
AxyI CCTNAGG 1 cut(s) 1070
BanI GGYRCC 3 cut(s) 385, 467, 911
BarI GAAGNNNNNNTAC 2 cut(s) 344, 376
BbsI GAAGAC 2 cut(s) 334, 1425
BbvCI CCTCAGC 1 cut(s) 279
BbvI GCAGC 2 cut(s) 271, 919
BccI CCATC 3 cut(s) 139, 249, 896
BciT130I CCWGG 2 cut(s) 896, 1325
BciVI GTATCC 1 cut(s) 1476
BcnI CCSGG 1 cut(s) 938
BcoDI GTCTC 6 cut(s) 274, 469, 521, 1119, 1233, 1306
BfaI CTAG 4 cut(s) 173, 206, 479, 734
BfmI CTRYAG 1 cut(s) 678
BfoI RGCGCY 1 cut(s) 1232
BfuI GTATCC 1 cut(s) 1476
BglII AGATCT 1 cut(s) 294
BisI GCNGC 2 cut(s) 285, 933
BlsI GCNGC 2 cut(s) 286, 934
Bme1390I CCNGG 3 cut(s) 896, 938, 1325
BmgT120I GGNCC 1 cut(s) 221
BmiI GGNNCC 3 cut(s) 387, 469, 913
BmrFI CCNGG 3 cut(s) 896, 938, 1325
BmsI GCATC 1 cut(s) 910
BmtI GCTAGC 1 cut(s) 737
BpiI GAAGAC 2 cut(s) 334, 1425
BplI GAGNNNNNCTC 2 cut(s) 272, 304
BpmI CTGGAG 2 cut(s) 1129, 1464
Bpu10I CCTNAGC 1 cut(s) 279
Bpu14I TTCGAA 1 cut(s) 1287
BpuMI CCSGG 1 cut(s) 938
BsaI GGTCTC 2 cut(s) 1119, 1233
BsaJI CCNNGG 6 cut(s) 217, 313, 728, 936, 962, 1324
BsaWI WCCGGW 1 cut(s) 908
BsaXI ACNNNNNCTCC 2 cut(s) 1303, 1333
Bsc4I CCNNNNNNNGG 2 cut(s) 155, 942
Bse118I RCCGGY 2 cut(s) 168, 256
Bse1I ACTGG 2 cut(s) 1146, 1447
Bse21I CCTNAGG 1 cut(s) 1070
Bse3DI GCAATG 3 cut(s) 1120, 1152, 1347
BseBI CCWGG 2 cut(s) 896, 1325
BseDI CCNNGG 6 cut(s) 217, 313, 728, 936, 962, 1324
BseGI GGATG 3 cut(s) 891, 1139, 1495
BseLI CCNNNNNNNGG 2 cut(s) 155, 942
BseMI GCAATG 3 cut(s) 1120, 1152, 1347
BseMII CTCAG 3 cut(s) 259, 270, 1084
BseNI ACTGG 2 cut(s) 1146, 1447
BseRI GAGGAG 2 cut(s) 529, 532
BseXI GCAGC 2 cut(s) 271, 919
BseYI CCCAGC 1 cut(s) 1307
BshFI GGCC 3 cut(s) 223, 256, 887
BshNI GGYRCC 3 cut(s) 385, 467, 911
BsiSI CCGG 4 cut(s) 169, 257, 909, 938
BslI CCNNNNNNNGG 2 cut(s) 155, 942
BsmAI GTCTC 6 cut(s) 274, 469, 521, 1119, 1233, 1306
BsmBI CGTCTC 1 cut(s) 1306
BsmI GAATGC 1 cut(s) 1102
BsnI GGCC 3 cut(s) 223, 256, 887
Bso31I GGTCTC 2 cut(s) 1119, 1233
Bsp119I TTCGAA 1 cut(s) 1287
Bsp143I GATC 8 cut(s) 153, 226, 294, 637, 670, 868, 898, 1191
Bsp19I CCATGG 2 cut(s) 217, 728
BspACI CCGC 2 cut(s) 190, 1452
BspANI GGCC 3 cut(s) 223, 256, 887
BspCNI CTCAG 3 cut(s) 258, 271, 1083
BspHI TCATGA 1 cut(s) 495
BspLI GGNNCC 3 cut(s) 387, 469, 913
BspOI GCTAGC 1 cut(s) 737
BspPI GGATC 2 cut(s) 678, 906
BspT104I TTCGAA 1 cut(s) 1287
BspT107I GGYRCC 3 cut(s) 385, 467, 911
BspTNI GGTCTC 2 cut(s) 1119, 1233
BsrBI CCGCTC 1 cut(s) 192
BsrDI GCAATG 3 cut(s) 1120, 1152, 1347
BsrFI RCCGGY 2 cut(s) 168, 256
BsrI ACTGG 2 cut(s) 1146, 1447
BssAI RCCGGY 2 cut(s) 168, 256
BssECI CCNNGG 6 cut(s) 217, 313, 728, 936, 962, 1324
BssMI GATC 8 cut(s) 153, 226, 294, 637, 670, 868, 898, 1191
BssT1I CCWWGG 4 cut(s) 217, 313, 728, 962
Bst2UI CCWGG 2 cut(s) 896, 1325
Bst4CI ACNGT 3 cut(s) 472, 516, 635
Bst6I CTCTTC 2 cut(s) 201, 1231
BstBI TTCGAA 1 cut(s) 1287
BstC8I GCNNGC 3 cut(s) 254, 735, 1359
BstDEI CTNAG 4 cut(s) 245, 279, 1070, 1423
BstDSI CCRYGG 2 cut(s) 217, 728
BstF5I GGATG 3 cut(s) 891, 1139, 1495
BstH2I RGCGCY 1 cut(s) 1232
BstHHI GCGC 3 cut(s) 211, 1078, 1231
BstKTI GATC 8 cut(s) 156, 229, 297, 640, 673, 871, 901, 1194
BstMAI GTCTC 6 cut(s) 274, 469, 521, 1119, 1233, 1306
BstMBI GATC 8 cut(s) 153, 226, 294, 637, 670, 868, 898, 1191
BstMWI GCNNNNNNNGC 4 cut(s) 284, 920, 929, 1065
BstNI CCWGG 2 cut(s) 896, 1325
BstSCI CCNGG 3 cut(s) 894, 936, 1323
BstSFI CTRYAG 1 cut(s) 678
BstV1I GCAGC 2 cut(s) 271, 919
BstV2I GAAGAC 2 cut(s) 334, 1425
BstX2I RGATCY 3 cut(s) 294, 670, 898
BstXI CCANNNNNNTGG 1 cut(s) 895
BstYI RGATCY 3 cut(s) 294, 670, 898
Bsu36I CCTNAGG 1 cut(s) 1070
BsuI GTATCC 1 cut(s) 1476
BsuRI GGCC 3 cut(s) 223, 256, 887
BtgI CCRYGG 2 cut(s) 217, 728
BtsCI GGATG 3 cut(s) 891, 1139, 1495
BtsI GCAGTG 1 cut(s) 1485
BtsIMutI CAGTG 4 cut(s) 640, 915, 1440, 1485
Cac8I GCNNGC 3 cut(s) 254, 735, 1359
CciI TCATGA 1 cut(s) 495
CfoI GCGC 3 cut(s) 211, 1078, 1231
Cfr10I RCCGGY 2 cut(s) 168, 256
Cfr13I GGNCC 1 cut(s) 221
Csp6I GTAC 4 cut(s) 80, 125, 631, 1407
CviAII CATG 7 cut(s) 218, 308, 496, 729, 1224, 1403, 1429
CviQI GTAC 4 cut(s) 80, 125, 631, 1407
DdeI CTNAG 4 cut(s) 245, 279, 1070, 1423
DpnI GATC 8 cut(s) 155, 228, 296, 639, 672, 870, 900, 1193
DpnII GATC 8 cut(s) 153, 226, 294, 637, 670, 868, 898, 1191
DraI TTTAAA 3 cut(s) 322, 564, 783
Eam1104I CTCTTC 2 cut(s) 201, 1231
EarI CTCTTC 2 cut(s) 201, 1231
Eco130I CCWWGG 4 cut(s) 217, 313, 728, 962
Eco31I GGTCTC 2 cut(s) 1119, 1233
Eco81I CCTNAGG 1 cut(s) 1070
EcoRI GAATTC 1 cut(s) 1329
EcoRII CCWGG 2 cut(s) 894, 1323
EcoT14I CCWWGG 4 cut(s) 217, 313, 728, 962
EcoT22I ATGCAT 1 cut(s) 1225
ErhI CCWWGG 4 cut(s) 217, 313, 728, 962
Esp3I CGTCTC 1 cut(s) 1306
FaeI CATG 7 cut(s) 221, 311, 499, 732, 1227, 1406, 1432
FalI AAGNNNNNCTT 3 cut(s) 326, 358, 1495
FatI CATG 7 cut(s) 217, 307, 495, 728, 1223, 1402, 1428
FauNDI CATATG 1 cut(s) 762
Fnu4HI GCNGC 2 cut(s) 285, 933
FokI GGATG 3 cut(s) 878, 1126, 1482
Fsp4HI GCNGC 2 cut(s) 285, 933
FspBI CTAG 4 cut(s) 173, 206, 479, 734
GlaI GCGC 3 cut(s) 210, 1077, 1230
GluI GCNGC 2 cut(s) 285, 933
GsaI CCCAGC 1 cut(s) 1311
GsuI CTGGAG 2 cut(s) 1129, 1464
HaeII RGCGCY 1 cut(s) 1232
HaeIII GGCC 3 cut(s) 223, 256, 887
HapII CCGG 4 cut(s) 169, 257, 909, 938
HhaI GCGC 3 cut(s) 211, 1078, 1231
Hin1II CATG 7 cut(s) 221, 311, 499, 732, 1227, 1406, 1432
Hin6I GCGC 3 cut(s) 209, 1076, 1229
HinP1I GCGC 3 cut(s) 209, 1076, 1229
HindIII AAGCTT 2 cut(s) 143, 587
HinfI GANTC 2 cut(s) 967, 1508
HpaII CCGG 4 cut(s) 169, 257, 909, 938
HphI GGTGA 6 cut(s) 82, 179, 271, 407, 728, 736
Hpy166II GTNNAC 2 cut(s) 744, 945
Hpy188I TCNGA 7 cut(s) 158, 248, 292, 351, 644, 955, 1016
Hpy188III TCNNGA 2 cut(s) 23, 496
Hpy8I GTNNAC 2 cut(s) 744, 945
Hpy99I CGWCG 1 cut(s) 559
HpyAV CCTTC 3 cut(s) 346, 641, 1103
HpyCH4III ACNGT 3 cut(s) 472, 516, 635
HpyCH4IV ACGT 1 cut(s) 1029
HpyCH4V TGCA 7 cut(s) 16, 851, 991, 1100, 1223, 1340, 1378
HpyF10VI GCNNNNNNNGC 4 cut(s) 284, 920, 929, 1065
HpyF3I CTNAG 4 cut(s) 245, 279, 1070, 1423
HpySE526I ACGT 1 cut(s) 1029
Hsp92II CATG 7 cut(s) 221, 311, 499, 732, 1227, 1406, 1432
HspAI GCGC 3 cut(s) 209, 1076, 1229
Kzo9I GATC 8 cut(s) 153, 226, 294, 637, 670, 868, 898, 1191
LmnI GCTCC 1 cut(s) 1445
Lsp1109I GCAGC 2 cut(s) 271, 919
LweI GCATC 1 cut(s) 910
MaeI CTAG 4 cut(s) 173, 206, 479, 734
MaeII ACGT 1 cut(s) 1029
MaeIII GTNAC 4 cut(s) 177, 716, 1030, 1184
MalI GATC 8 cut(s) 155, 228, 296, 639, 672, 870, 900, 1193
MbiI CCGCTC 1 cut(s) 192
MboI GATC 8 cut(s) 153, 226, 294, 637, 670, 868, 898, 1191
MflI RGATCY 3 cut(s) 294, 670, 898
MmeI TCCRAC 1 cut(s) 994
Mph1103I ATGCAT 1 cut(s) 1225
MroXI GAANNNNTTC 1 cut(s) 1283
MseI TTAA 8 cut(s) 321, 431, 563, 569, 782, 1085, 1218, 1350
MslI CAYNNNNRTG 2 cut(s) 749, 1095
MspA1I CMGCKG 1 cut(s) 278
MspI CCGG 4 cut(s) 169, 257, 909, 938
MspR9I CCNGG 3 cut(s) 896, 938, 1325
Mva1269I GAATGC 1 cut(s) 1102
MvaI CCWGG 2 cut(s) 896, 1325
MwoI GCNNNNNNNGC 4 cut(s) 284, 920, 929, 1065
NciI CCSGG 1 cut(s) 938
NcoI CCATGG 2 cut(s) 217, 728
NdeI CATATG 1 cut(s) 762
NdeII GATC 8 cut(s) 153, 226, 294, 637, 670, 868, 898, 1191
NheI GCTAGC 1 cut(s) 733
NlaIII CATG 7 cut(s) 221, 311, 499, 732, 1227, 1406, 1432
NlaIV GGNNCC 3 cut(s) 387, 469, 913
NmuCI GTSAC 1 cut(s) 716
NsiI ATGCAT 1 cut(s) 1225
NspV TTCGAA 1 cut(s) 1287
OliI CACNNNNGTG 1 cut(s) 749
PagI TCATGA 1 cut(s) 495
PctI GAATGC 1 cut(s) 1102
PdmI GAANNNNTTC 1 cut(s) 1283
PfeI GAWTC 2 cut(s) 967, 1508
PflFI GACNNNGTC 1 cut(s) 949
PfoI TCCNGGA 1 cut(s) 894
PkrI GCNGC 2 cut(s) 286, 934
Psp6I CCWGG 2 cut(s) 894, 1323
PspFI CCCAGC 1 cut(s) 1307
PspGI CCWGG 2 cut(s) 894, 1323
PspN4I GGNNCC 3 cut(s) 387, 469, 913
PspPI GGNCC 1 cut(s) 221
PsuI RGATCY 3 cut(s) 294, 670, 898
PsyI GACNNNGTC 1 cut(s) 949
PvuII CAGCTG 1 cut(s) 278
RsaI GTAC 4 cut(s) 81, 126, 632, 1408
RsaNI GTAC 4 cut(s) 80, 125, 631, 1407
RseI CAYNNNNRTG 2 cut(s) 749, 1095
SaqAI TTAA 8 cut(s) 321, 431, 563, 569, 782, 1085, 1218, 1350
SatI GCNGC 2 cut(s) 285, 933
Sau3AI GATC 8 cut(s) 153, 226, 294, 637, 670, 868, 898, 1191
Sau96I GGNCC 1 cut(s) 221
ScrFI CCNGG 3 cut(s) 896, 938, 1325
SfaNI GCATC 1 cut(s) 910
SfcI CTRYAG 1 cut(s) 678
SfuI TTCGAA 1 cut(s) 1287
SmiI ATTTAAAT 1 cut(s) 783
SmiMI CAYNNNNRTG 2 cut(s) 749, 1095
SsiI CCGC 2 cut(s) 190, 1452
SspI AATATT 1 cut(s) 712
SspMI CTAG 4 cut(s) 173, 206, 479, 734
StyD4I CCNGG 3 cut(s) 894, 936, 1323
StyI CCWWGG 4 cut(s) 217, 313, 728, 962
SwaI ATTTAAAT 1 cut(s) 783
TaaI ACNGT 3 cut(s) 472, 516, 635
TaiI ACGT 1 cut(s) 1032
TaqI TCGA 3 cut(s) 1133, 1287, 1386
TatI WGTACW 1 cut(s) 630
TfiI GAWTC 2 cut(s) 967, 1508
Tru1I TTAA 8 cut(s) 321, 431, 563, 569, 782, 1085, 1218, 1350
Tru9I TTAA 8 cut(s) 321, 431, 563, 569, 782, 1085, 1218, 1350
TscAI CASTG 4 cut(s) 640, 922, 1447, 1485
TseFI GTSAC 1 cut(s) 716
TseI GCWGC 2 cut(s) 284, 932
Tsp45I GTSAC 1 cut(s) 716
TspDTI ATGAA 7 cut(s) 599, 995, 1011, 1035, 1079, 1287, 1484
TspRI CASTG 4 cut(s) 640, 922, 1447, 1485
Tth111I GACNNNGTC 1 cut(s) 949
XapI RAATTY 7 cut(s) 18, 565, 778, 985, 1053, 1247, 1329
XcmI CCANNNNNNNNNTGG 1 cut(s) 735
XmnI GAANNNNTTC 1 cut(s) 1283
XspI CTAG 4 cut(s) 173, 206, 479, 734
Zsp2I ATGCAT 1 cut(s) 1225
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.