RLG00000028353

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Reverse (-)
21689125 .. 21691378
2254 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000028353

Sequence Viewer

Length: 1602 bp
ATGCCAAATCTCCTGCAAATGGTGGAACTGAAACTTAATGAAACCTTCTCGATCTTGCTTCAACCCCTTTATCTCAAATATATACTACTTCTCTCCATTTTTCTCATTCTCTTGTACAGATGGTCCTCTTATACCAACTCATCATCAATTTCAGTACCACCATCTCCACCGAAGCTACCTGTGATCGGAAACCTCCACCAGCTAGGTTTACTCCCTCATCGCTCTCTTCAAACCTTAGCGCAACGACACGGACCTGATCTGATGCTACTTCATTTCGGAAGCAGGCCTGTCCTTGTGGTCTCGTCGGCCGAGTTTGCCTCCGAGATCTTCAAATCCCATGACATCGCATTCTCTGACAGACCCAAGCTTATCTTCTTCGAGAAGGTTGTCAAGTACAAGGACATTGTATCGGCGCCTTATGGCGAGTACTGGAGACAGGTGAGAAGTGTTTGTGTCTTAAACCTTTTGAGCAACAGAAGGGTTCGTTCTTTTCGTGCCGTGAGACTAGAGGAAACGAAACTCATGATGAGCAACATAGCACAGTCTTGTACTATGACATCTTCCTCATCCTCATCAACATCGCCGGTTTTGAATTTAAGCGAAATGTTTCTGAAGCTCACTAATGATATCATTTGTAGAGTTGCTATGGGTAGGAAGTACAGCGATTGTGGGGAAGGTCGTGGGAGGATGTTTATGGAGCTTTCTGTAGAGCTGACAGAGTTCTTCACAAGGTTCAATATTGGTGACTATATCCCATGGCTTGCTTGGTTCACCCGAGTAAATGGTTTTGATGCAAAACTAGATGACCTGGCTAAACGGGTGGATGCCTTCATTGATATGGTTATTCAAGAGCATATGGATAAATCAAACAATGGAAACGATGATGGCATGAATAATGATACTGAGGACGAAAAGGATTTGGTGGATGTTTTGCTTTCAGTTCAAAAAGAAACTGCAGTTGGTTTTCCTATTGATCGAGTTAGCATAAAGGCTATTATCCTGGATATATTTACGGGTGGCACTGATACCACGTATACTGCCCTAGAGTGGACAATGTCTGAACTTCTAAAAAATCCAACGGTAATGAAGAAACTACAGAATGAAGTAAGGGGAATGGTTGGAAATAAAAAGGACGTAACAGAGGATGATTTGGCTGGAATGCACTACTTGAACGCAGTCATCATGGAGACTTTTCGCTTACATCCTCCATTTCCATTGCTATTGCCTAGGATGTGCAACCAAGATGTGAAAATAAAAGGCTATAACATTAAGGCTAATACACATGTTATGGTTAATGCATGGGCACTCGGAAGAGATCCCAAGTCATACACAAATCCAGAACAGTACAAGCCAGAAAGGTTCTTGGACAGTGTCATAGATTATAAAGGGAATAACTATGAATTAATTCCATTTGGTGCTGGCAGACGAGGTTGCCCTGGAATTCAGTTTGCTATAGTCGTTGAAGAACTTGTTTTAGCAAATATTGTACACAAGTTTGATTGGGCTCTGCCTCATGGTGCGACAACGGAAGACCTAGACATGACTGAAACCACGGGTTTAACCGCACATAGAAAGTATCCTCTTATGGCAGTTGCTACATAA

Protein Analysis

534

Amino Acids

60.47

Weight (kDa)

6.48

Isoelectric Point (pI)

39.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 53 - 521 1e-101 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000061)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G48270 AT3G48280 AT3G48290 AT3G48290 AT3G48300 AT3G48300 AT3G48310 AT3G48320 AT4G20235 AT4G20235
fragaria_vesca FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g36190 FvH4_3g14160 FvH4_3g14210 FvH4_3g14260 FvH4_3g14260 FvH4_3g21100 FvH4_3g21380 FvH4_4g24460 FvH4_4g24500 FvH4_5g06571 FvH4_5g06571 FvH4_5g06571 FvH4_5g06571 FvH4_5g06572 FvH4_5g06573 FvH4_5g06574 FvH4_5g06575 FvH4_5g06576 FvH4_5g06577 FvH4_5g06577 FvH4_5g07540 FvH4_5g07550 FvH4_5g07560 FvH4_5g07570 FvH4_5g29491 FvH4_5g29492 FvH4_6g23870 FvH4_6g23880 FvH4_6g26870 FvH4_7g11861 FvH4_7g11862 FvH4_7g13050 FvH4_7g13060 FvH4_7g13080 FvH4_7g13080 FvH4_7g22630 FvH4_7g22650 FvH4_7g22651 FvH4_7g23020
malus_domestica MD03G1207400.v1.1 MD03G1214800.v1.1 MD03G1218500.v1.1 MD06G1163100.v1.1 MD06G1163300.v1.1 MD06G1163400.v1.1 MD06G1163500.v1.1 MD06G1163600.v1.1 MD06G1163800.v1.1 MD06G1164000.v1.1 MD06G1164100.v1.1 MD06G1224400.v1.1 MD08G1222800.v1.1 MD08G1222900.v1.1 MD08G1223100.v1.1 MD11G1091500.v1.1 MD11G1091800.v1.1 MD14G1163200.v1.1 MD14G1169000.v1.1 MD15G1207200.v1.1 MD15G1207300.v1.1 MD17G1259400.v1.1
prunus_persica Prupe.4G198100_v2.0.a1 Prupe.4G199100_v2.0.a1 Prupe.4G199400_v2.0.a1 Prupe.4G199800_v2.0.a1 Prupe.4G225200_v2.0.a1 Prupe.4G239100_v2.0.a1 Prupe.5G156600_v2.0.a1 Prupe.5G163500_v2.0.a1 Prupe.7G209500_v2.0.a1 Prupe.I003400_v2.0.a1
pyrus_communis pycom03g16340 pycom06g14600 pycom06g14610 pycom06g14620 pycom06g14630 pycom06g14640 pycom06g14670 pycom06g14690 pycom08g19390 pycom08g19400 pycom08g19410 pycom11g07600 pycom11g07610 pycom11g07620 pycom11g07660 pycom14g13580 pycom14g14080 pycom14g14100 pycom14g14110 pycom15g18380 pycom17g26080
rosa_chinensis RchiOBHm_Chr1g0339441 RchiOBHm_Chr1g0339451 RchiOBHm_Chr1g0352191 RchiOBHm_Chr1g0368221 RchiOBHm_Chr2g0129531 RchiOBHm_Chr2g0129541 RchiOBHm_Chr3g0477631 RchiOBHm_Chr3g0482551 RchiOBHm_Chr3g0482561 RchiOBHm_Chr3g0482571 RchiOBHm_Chr4g0411601 RchiOBHm_Chr4g0422181 RchiOBHm_Chr5g0036661 RchiOBHm_Chr5g0036731 RchiOBHm_Chr6g0274021 RchiOBHm_Chr7g0190921 RchiOBHm_Chr7g0190931 RchiOBHm_Chr7g0190941 RchiOBHm_Chr7g0190951 RchiOBHm_Chr7g0190961 RchiOBHm_Chr7g0190971 RchiOBHm_Chr7g0191001 RchiOBHm_Chr7g0191011 RchiOBHm_Chr7g0191021 RchiOBHm_Chr7g0192181 RchiOBHm_Chr7g0192191 RchiOBHm_Chr7g0192201 RchiOBHm_Chr7g0192221 RchiOBHm_Chr7g0192231 RchiOBHm_Chr7g0192281 RchiOBHm_Chr7g0197311
rosa_laevigata RLG00000003942 RLG00000004345 RLG00000004379 RLG00000004383 RLG00000004384 RLG00000004385 RLG00000004387 RLG00000004388 RLG00000004389 RLG00000004480 RLG00000004481 RLG00000004482 RLG00000004483 RLG00000004485 RLG00000008342 RLG00000008401 RLG00000013583 RLG00000017044 RLG00000027229 RLG00000028349 RLG00000028350 RLG00000028353 RLG00000028820 RLG00000033707 RLG00000033710
rosa_multiflora Rmu_co8020340.1_g000001 Rmu_co8096640.1_g000001 Rmu_co8214930.1_g000001 Rmu_co8223272.1_g000001 Rmu_co8282535.1_g000001 Rmu_co8343567.1_g000001 Rmu_co8404191.1_g000001 Rmu_co8455157.1_g000001 Rmu_sc0000062.1_g000028 Rmu_sc0000082.1_g000091 Rmu_sc0000509.1_g000017 Rmu_sc0000775.1_g000001 Rmu_sc0000999.1_g000034 Rmu_sc0001559.1_g000004 Rmu_sc0001559.1_g000009 Rmu_sc0002164.1_g000001 Rmu_sc0002164.1_g000005 Rmu_sc0002164.1_g000007 Rmu_sc0002164.1_g000008 Rmu_sc0002164.1_g000009 Rmu_sc0002164.1_g000019 Rmu_sc0002247.1_g000009 Rmu_sc0002373.1_g000002 Rmu_sc0002373.1_g000003 Rmu_sc0002944.1_g000059 Rmu_sc0003930.1_g000004 Rmu_sc0004958.1_g000001 Rmu_sc0005197.1_g000014 Rmu_sc0005898.1_g000008 Rmu_sc0005898.1_g000009 Rmu_sc0005898.1_g000015 Rmu_sc0006059.1_g000004 Rmu_sc0006059.1_g000010 Rmu_sc0006903.1_g000007 Rmu_sc0006903.1_g000008 Rmu_sc0006968.1_g000001 Rmu_sc0011009.1_g000009 Rmu_sc0022852.1_g000002 Rmu_sc0033854.1_g000001 Rmu_ssc0000421.1_g000057 Rmu_ssc0000421.1_g000067 Rmu_ssc0000421.1_g000069 Rmu_ssc0000421.1_g000072 Rmu_ssc0000421.1_g000081 Rmu_ssc0000421.1_g000086
rosa_roxburghii Rroxscaffold_158G00443680 Rroxscaffold_158G00443710 Rroxscaffold_158G00443720 Rroxscaffold_158G00443740 Rroxscaffold_1G00034950 Rroxscaffold_1G00044240 Rroxscaffold_1G00044270 Rroxscaffold_3G00241380 Rroxscaffold_3G00247000 Rroxscaffold_3G00263120 Rroxscaffold_3G00263150 Rroxscaffold_3G00263160 Rroxscaffold_3G00263170 Rroxscaffold_3G00263180 Rroxscaffold_3G00263190 Rroxscaffold_3G00263210 Rroxscaffold_3G00263230 Rroxscaffold_3G00263260 Rroxscaffold_3G00264110 Rroxscaffold_3G00264130 Rroxscaffold_3G00264160 Rroxscaffold_3G00264180 Rroxscaffold_3G00264200 Rroxscaffold_4G00288750 Rroxscaffold_4G00303110 Rroxscaffold_4G00303120 Rroxscaffold_4G00322280 Rroxscaffold_5G00356200 Rroxscaffold_6G00399150 Rroxscaffold_6G00399290 Rroxscaffold_7G00194770
rosa_rugosa Rorug01G0225300 Rorug01G0225400 Rorug01G0225800 Rorug01G0226000 Rorug01G0339400 Rorug01G0451500 Rorug03G0196900 Rorug03G0294900 Rorug04G0107500 Rorug04G0107600 Rorug04G0129700 Rorug04G0178000 Rorug05G0144900.1 Rorug05G0145000 Rorug05G0228000 Rorug05G0228600 Rorug06G0078300 Rorug06G0508000 Rorug06G0508100 Rorug06G0508100 Rorug06G0508400 Rorug06G0513400 Rorug07G0000100 Rorug07G0000200 Rorug07G0000300 Rorug07G0000500 Rorug07G0000800
rosa_samantha Rh1BG060400 Rh1BG210300 Rh1BG210700 Rh1BG210800 Rh1BG309800 Rh1CG223800 Rh1CG224200 Rh1CG325200 Rh1DG237000 Rh1DG237400 Rh1DG341600 Rh2DG365700 Rh3AG212500 Rh3AG248400 Rh3CG239800 Rh3DG239300 Rh4AG169300 Rh4BG166200 Rh4BG240500 Rh4BG240600 Rh4DG163600 Rh5AG249600 Rh5AG249900 Rh5AG250000 Rh5CG283100 Rh5CG283200 Rh5CG283400 Rh5DG259200 Rh5DG259800 Rh6BG197700 Rh6CG197800 Rh6DG189400 Rh7AG114900 Rh7AG115000 Rh7AG115200 Rh7AG115300 Rh7AG115400 Rh7AG115500 Rh7AG123900 Rh7AG124100 Rh7AG124300 Rh7BG117200 Rh7BG117400 Rh7BG118400 Rh7BG125400 Rh7BG125600 Rh7BG125700 Rh7BG125800 Rh7BG125900 Rh7BG126000 Rh7BG126400 Rh7BG126600 Rh7BG126700 Rh7BG166200 Rh7DG118600 Rh7DG118700 Rh7DG118900 Rh7DG119000 Rh7DG119100 Rh7DG127400 Rh7DG127600 Rh7DG127700 Rh7DG127900 Rh7DG128200
rosa_wichuraiana Rw1G013270 Rw1G020790 Rw2G027890 Rw2G028040 Rw3G019240 Rw4G014070 Rw4G020540 Rw5G021320 Rw5G022970 Rw6G016920 Rw7G010020 Rw7G010040 Rw7G010580 Rw7G010590 Rw7G010600 Rw7G010610 Rw7G010620 Rw7G010630 Rw7G010640 Rw7G010690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1383
AccB1I GGYRCC 1 cut(s) 412
AccI GTMKAC 1 cut(s) 1034
AciI CCGC 1 cut(s) 1563
AclWI GGATC 1 cut(s) 1310
AcoI YGGCCR 1 cut(s) 306
AcsI RAATTY 2 cut(s) 592, 1440
AcuI CTGAAG 1 cut(s) 632
AcyI GRCGYC 1 cut(s) 413
AfaI GTAC 8 cut(s) 116, 156, 395, 428, 550, 659, 1346, 1488
AfiI CCNNNNNNNGG 3 cut(s) 19, 185, 1047
AflIII ACRYGT 1 cut(s) 1282
AgsI TTSAA 9 cut(s) 62, 230, 331, 592, 736, 848, 944, 1171, 1463
AjnI CCWGG 3 cut(s) 807, 999, 1435
AjuI GAANNNNNNNTTGG 4 cut(s) 356, 388, 942, 974
AluBI AGCT 6 cut(s) 175, 202, 367, 616, 700, 712
AluI AGCT 6 cut(s) 175, 202, 367, 616, 700, 712
Alw26I GTCTC 4 cut(s) 304, 427, 496, 1181
AlwI GGATC 1 cut(s) 1310
Ama87I CYCGRG 1 cut(s) 774
AoxI GGCC 2 cut(s) 284, 306
ApoI RAATTY 2 cut(s) 592, 1440
AseI ATTAAT 1 cut(s) 1403
Asp700I GAANNNNTTC 2 cut(s) 606, 1404
AspA2I CCTAGG 1 cut(s) 1226
AspLEI GCGC 2 cut(s) 241, 415
AspS9I GGNCC 2 cut(s) 123, 251
AsuHPI GGTGA 3 cut(s) 451, 755, 763
AvaI CYCGRG 1 cut(s) 774
AvaII GGWCC 2 cut(s) 123, 251
AvrII CCTAGG 1 cut(s) 1226
BaeGI GKGCMC 1 cut(s) 1306
BanI GGYRCC 1 cut(s) 412
BanII GRGCYC 1 cut(s) 1507
BbsI GAAGAC 1 cut(s) 1536
BccI CCATC 3 cut(s) 114, 169, 878
BceAI ACGGC 1 cut(s) 482
BciT130I CCWGG 3 cut(s) 809, 1001, 1437
BciVI GTATCC 1 cut(s) 1587
BcoDI GTCTC 4 cut(s) 304, 427, 496, 1181
BfaI CTAG 6 cut(s) 203, 506, 800, 1043, 1227, 1535
BfmI CTRYAG 4 cut(s) 705, 954, 1094, 1452
BfoI RGCGCY 1 cut(s) 416
BfuI GTATCC 1 cut(s) 1587
BglII AGATCT 1 cut(s) 324
BlnI CCTAGG 1 cut(s) 1226
BmcAI AGTACT 1 cut(s) 428
Bme1390I CCNGG 3 cut(s) 809, 1001, 1437
Bme18I GGWCC 2 cut(s) 123, 251
BmeT110I CYCGRG 1 cut(s) 774
BmgT120I GGNCC 2 cut(s) 123, 251
BmiI GGNNCC 1 cut(s) 414
BmrFI CCNGG 3 cut(s) 809, 1001, 1437
BmsI GCATC 3 cut(s) 252, 781, 814
BpiI GAAGAC 1 cut(s) 1536
BplI GAGNNNNNCTC 2 cut(s) 302, 334
BpmI CTGGAG 1 cut(s) 451
Bpu10I CCTNAGC 1 cut(s) 235
BsaAI YACGTR 1 cut(s) 1032
BsaHI GRCGYC 1 cut(s) 413
BsaI GGTCTC 1 cut(s) 304
BsaJI CCNNGG 4 cut(s) 755, 1226, 1435, 1551
Bsc4I CCNNNNNNNGG 3 cut(s) 19, 185, 1047
Bse118I RCCGGY 1 cut(s) 583
Bse1I ACTGG 1 cut(s) 434
Bse3DI GCAATG 1 cut(s) 1214
BseBI CCWGG 3 cut(s) 809, 1001, 1437
BseDI CCNNGG 4 cut(s) 755, 1226, 1435, 1551
BseGI GGATG 7 cut(s) 566, 693, 829, 931, 1150, 1201, 1236
BseLI CCNNNNNNNGG 3 cut(s) 19, 185, 1047
BseMI GCAATG 1 cut(s) 1214
BseMII CTCAG 1 cut(s) 894
BseNI ACTGG 1 cut(s) 434
BseSI GKGCMC 1 cut(s) 1306
BseX3I CGGCCG 1 cut(s) 306
Bsh1285I CGRYCG 1 cut(s) 309
BshFI GGCC 2 cut(s) 286, 308
BshNI GGYRCC 1 cut(s) 412
BsiEI CGRYCG 1 cut(s) 309
BsiHKCI CYCGRG 1 cut(s) 774
BsiSI CCGG 1 cut(s) 584
BslI CCNNNNNNNGG 3 cut(s) 19, 185, 1047
BsmAI GTCTC 4 cut(s) 304, 427, 496, 1181
BsmI GAATGC 2 cut(s) 347, 1164
BsnI GGCC 2 cut(s) 286, 308
Bso31I GGTCTC 1 cut(s) 304
BsoBI CYCGRG 1 cut(s) 774
Bsp1286I GDGCHC 2 cut(s) 1306, 1507
Bsp1407I TGTACA 2 cut(s) 114, 1486
Bsp143I GATC 6 cut(s) 51, 183, 256, 324, 973, 1315
Bsp19I CCATGG 1 cut(s) 755
BspACI CCGC 1 cut(s) 1563
BspANI GGCC 2 cut(s) 286, 308
BspCNI CTCAG 1 cut(s) 895
BspHI TCATGA 1 cut(s) 522
BspLI GGNNCC 1 cut(s) 414
BspMAI CTGCAG 1 cut(s) 958
BspPI GGATC 1 cut(s) 1310
BspT107I GGYRCC 1 cut(s) 412
BspTNI GGTCTC 1 cut(s) 304
BsrDI GCAATG 1 cut(s) 1214
BsrFI RCCGGY 1 cut(s) 583
BsrGI TGTACA 2 cut(s) 114, 1486
BsrI ACTGG 1 cut(s) 434
BssAI RCCGGY 1 cut(s) 583
BssECI CCNNGG 4 cut(s) 755, 1226, 1435, 1551
BssMI GATC 6 cut(s) 51, 183, 256, 324, 973, 1315
BssNAI GTATAC 1 cut(s) 1035
BssNI GRCGYC 1 cut(s) 413
BssT1I CCWWGG 2 cut(s) 755, 1226
Bst1107I GTATAC 1 cut(s) 1035
Bst2UI CCWGG 3 cut(s) 809, 1001, 1437
Bst4CI ACNGT 4 cut(s) 543, 1081, 1344, 1370
Bst6I CTCTTC 2 cut(s) 231, 1306
BstACI GRCGYC 1 cut(s) 413
BstAUI TGTACA 2 cut(s) 114, 1486
BstBAI YACGTR 1 cut(s) 1032
BstC8I GCNNGC 3 cut(s) 284, 762, 1420
BstDEI CTNAG 2 cut(s) 235, 903
BstDSI CCRYGG 2 cut(s) 755, 1551
BstF5I GGATG 7 cut(s) 566, 693, 829, 931, 1150, 1201, 1236
BstH2I RGCGCY 1 cut(s) 416
BstHHI GCGC 2 cut(s) 241, 415
BstKTI GATC 6 cut(s) 54, 186, 259, 327, 976, 1318
BstMAI GTCTC 4 cut(s) 304, 427, 496, 1181
BstMBI GATC 6 cut(s) 51, 183, 256, 324, 973, 1315
BstMCI CGRYCG 1 cut(s) 309
BstMWI GCNNNNNNNGC 1 cut(s) 314
BstNI CCWGG 3 cut(s) 809, 1001, 1437
BstNSI RCATGY 1 cut(s) 1286
BstSCI CCNGG 3 cut(s) 807, 999, 1435
BstSFI CTRYAG 4 cut(s) 705, 954, 1094, 1452
BstSLI GKGCMC 1 cut(s) 1306
BstV2I GAAGAC 1 cut(s) 1536
BstX2I RGATCY 2 cut(s) 324, 1315
BstYI RGATCY 2 cut(s) 324, 1315
BstZ17I GTATAC 1 cut(s) 1035
BstZI CGGCCG 1 cut(s) 306
BsuI GTATCC 1 cut(s) 1587
BsuRI GGCC 2 cut(s) 286, 308
BtgI CCRYGG 2 cut(s) 755, 1551
BtgZI GCGATG 3 cut(s) 203, 328, 564
BtsCI GGATG 7 cut(s) 566, 693, 829, 931, 1150, 1201, 1236
BtsIMutI CAGTG 2 cut(s) 1020, 1375
Cac8I GCNNGC 3 cut(s) 284, 762, 1420
CciI TCATGA 1 cut(s) 522
CfoI GCGC 2 cut(s) 241, 415
Cfr10I RCCGGY 1 cut(s) 583
Cfr13I GGNCC 2 cut(s) 123, 251
Csp6I GTAC 8 cut(s) 115, 155, 394, 427, 549, 658, 1345, 1487
CviAII CATG 9 cut(s) 338, 523, 756, 889, 1183, 1283, 1299, 1514, 1540
CviQI GTAC 8 cut(s) 115, 155, 394, 427, 549, 658, 1345, 1487
DdeI CTNAG 2 cut(s) 235, 903
DinI GGCGCC 1 cut(s) 414
DpnI GATC 6 cut(s) 53, 185, 258, 326, 975, 1317
DpnII GATC 6 cut(s) 51, 183, 256, 324, 973, 1315
EaeI YGGCCR 1 cut(s) 306
EagI CGGCCG 1 cut(s) 306
Eam1104I CTCTTC 2 cut(s) 231, 1306
EarI CTCTTC 2 cut(s) 231, 1306
EclXI CGGCCG 1 cut(s) 306
Eco130I CCWWGG 2 cut(s) 755, 1226
Eco147I AGGCCT 1 cut(s) 286
Eco24I GRGCYC 1 cut(s) 1507
Eco31I GGTCTC 1 cut(s) 304
Eco32I GATATC 1 cut(s) 628
Eco47I GGWCC 2 cut(s) 123, 251
Eco52I CGGCCG 1 cut(s) 306
Eco57I CTGAAG 1 cut(s) 632
Eco88I CYCGRG 1 cut(s) 774
EcoRI GAATTC 1 cut(s) 1440
EcoRII CCWGG 3 cut(s) 807, 999, 1435
EcoRV GATATC 1 cut(s) 628
EcoT14I CCWWGG 2 cut(s) 755, 1226
EcoT22I ATGCAT 1 cut(s) 1300
EcoT38I GRGCYC 1 cut(s) 1507
EgeI GGCGCC 1 cut(s) 414
EheI GGCGCC 1 cut(s) 414
ErhI CCWWGG 2 cut(s) 755, 1226
FaeI CATG 9 cut(s) 341, 526, 759, 892, 1186, 1286, 1302, 1517, 1543
FalI AAGNNNNNCTT 2 cut(s) 356, 388
FatI CATG 9 cut(s) 337, 522, 755, 888, 1182, 1282, 1298, 1513, 1539
FauNDI CATATG 1 cut(s) 855
FblI GTMKAC 1 cut(s) 1034
FokI GGATG 7 cut(s) 553, 700, 836, 938, 1157, 1188, 1243
FriOI GRGCYC 1 cut(s) 1507
FspBI CTAG 6 cut(s) 203, 506, 800, 1043, 1227, 1535
GlaI GCGC 2 cut(s) 240, 414
GsuI CTGGAG 1 cut(s) 451
HaeII RGCGCY 1 cut(s) 416
HaeIII GGCC 2 cut(s) 286, 308
HapII CCGG 1 cut(s) 584
HhaI GCGC 2 cut(s) 241, 415
Hin1I GRCGYC 1 cut(s) 413
Hin1II CATG 9 cut(s) 341, 526, 759, 892, 1186, 1286, 1302, 1517, 1543
Hin6I GCGC 2 cut(s) 239, 413
HinP1I GCGC 2 cut(s) 239, 413
HindIII AAGCTT 1 cut(s) 365
HpaII CCGG 1 cut(s) 584
HphI GGTGA 3 cut(s) 451, 755, 763
Hpy166II GTNNAC 5 cut(s) 209, 771, 1035, 1050, 1489
Hpy188I TCNGA 8 cut(s) 188, 261, 278, 322, 355, 612, 1060, 1310
Hpy188III TCNNGA 5 cut(s) 49, 379, 523, 848, 1337
Hpy8I GTNNAC 5 cut(s) 209, 771, 1035, 1050, 1489
Hpy99I CGWCG 1 cut(s) 307
HpyAV CCTTC 5 cut(s) 55, 376, 471, 668, 838
HpyCH4III ACNGT 4 cut(s) 543, 1081, 1344, 1370
HpyCH4IV ACGT 2 cut(s) 1031, 1134
HpyCH4V TGCA 6 cut(s) 16, 794, 956, 1162, 1236, 1298
HpyF10VI GCNNNNNNNGC 1 cut(s) 314
HpyF3I CTNAG 2 cut(s) 235, 903
HpySE526I ACGT 2 cut(s) 1031, 1134
Hsp92I GRCGYC 1 cut(s) 413
Hsp92II CATG 9 cut(s) 341, 526, 759, 892, 1186, 1286, 1302, 1517, 1543
HspAI GCGC 2 cut(s) 239, 413
KasI GGCGCC 1 cut(s) 412
Kzo9I GATC 6 cut(s) 51, 183, 256, 324, 973, 1315
LmnI GCTCC 1 cut(s) 697
LweI GCATC 3 cut(s) 252, 781, 814
MaeI CTAG 6 cut(s) 203, 506, 800, 1043, 1227, 1535
MaeII ACGT 2 cut(s) 1031, 1134
MaeIII GTNAC 2 cut(s) 743, 1135
MalI GATC 6 cut(s) 53, 185, 258, 326, 975, 1317
MboI GATC 6 cut(s) 51, 183, 256, 324, 973, 1315
MflI RGATCY 2 cut(s) 324, 1315
MhlI GDGCHC 2 cut(s) 1306, 1507
MluCI AATT 5 cut(s) 147, 592, 1400, 1404, 1440
Mly113I GGCGCC 1 cut(s) 413
MmeI TCCRAC 2 cut(s) 1099, 1100
Mph1103I ATGCAT 1 cut(s) 1300
MroXI GAANNNNTTC 2 cut(s) 606, 1404
MseI TTAA 7 cut(s) 36, 458, 596, 1269, 1293, 1403, 1559
MslI CAYNNNNRTG 1 cut(s) 836
MspI CCGG 1 cut(s) 584
MspR9I CCNGG 3 cut(s) 809, 1001, 1437
Mva1269I GAATGC 2 cut(s) 347, 1164
MvaI CCWGG 3 cut(s) 809, 1001, 1437
MwoI GCNNNNNNNGC 1 cut(s) 314
NarI GGCGCC 1 cut(s) 413
NcoI CCATGG 1 cut(s) 755
NdeI CATATG 1 cut(s) 855
NdeII GATC 6 cut(s) 51, 183, 256, 324, 973, 1315
NlaIII CATG 9 cut(s) 341, 526, 759, 892, 1186, 1286, 1302, 1517, 1543
NlaIV GGNNCC 1 cut(s) 414
NmeAIII GCCGAG 1 cut(s) 334
NmuCI GTSAC 1 cut(s) 743
NsiI ATGCAT 1 cut(s) 1300
NspI RCATGY 1 cut(s) 1286
PagI TCATGA 1 cut(s) 522
PceI AGGCCT 1 cut(s) 286
PciI ACATGT 1 cut(s) 1282
PcsI WCGNNNNNNNCGW 1 cut(s) 490
PctI GAATGC 2 cut(s) 347, 1164
PdmI GAANNNNTTC 2 cut(s) 606, 1404
PflFI GACNNNGTC 2 cut(s) 1054, 1370
PfoI TCCNGGA 1 cut(s) 999
PluTI GGCGCC 1 cut(s) 416
Ppu21I YACGTR 1 cut(s) 1032
PscI ACATGT 1 cut(s) 1282
PshBI ATTAAT 1 cut(s) 1403
PsiI TTATAA 1 cut(s) 1383
Psp6I CCWGG 3 cut(s) 807, 999, 1435
PspGI CCWGG 3 cut(s) 807, 999, 1435
PspN4I GGNNCC 1 cut(s) 414
PspPI GGNCC 2 cut(s) 123, 251
PstI CTGCAG 1 cut(s) 958
PsuI RGATCY 2 cut(s) 324, 1315
PsyI GACNNNGTC 2 cut(s) 1054, 1370
RsaI GTAC 8 cut(s) 116, 156, 395, 428, 550, 659, 1346, 1488
RsaNI GTAC 8 cut(s) 115, 155, 394, 427, 549, 658, 1345, 1487
RseI CAYNNNNRTG 1 cut(s) 836
SaqAI TTAA 7 cut(s) 36, 458, 596, 1269, 1293, 1403, 1559
Sau3AI GATC 6 cut(s) 51, 183, 256, 324, 973, 1315
Sau96I GGNCC 2 cut(s) 123, 251
ScaI AGTACT 1 cut(s) 428
ScrFI CCNGG 3 cut(s) 809, 1001, 1437
SduI GDGCHC 2 cut(s) 1306, 1507
SfaNI GCATC 3 cut(s) 252, 781, 814
SfcI CTRYAG 4 cut(s) 705, 954, 1094, 1452
SfoI GGCGCC 1 cut(s) 414
SinI GGWCC 2 cut(s) 123, 251
SmiMI CAYNNNNRTG 1 cut(s) 836
Sse9I AATT 5 cut(s) 147, 592, 1400, 1404, 1440
SseBI AGGCCT 1 cut(s) 286
SsiI CCGC 1 cut(s) 1563
SspDI GGCGCC 1 cut(s) 412
SspI AATATT 2 cut(s) 739, 1483
SspMI CTAG 6 cut(s) 203, 506, 800, 1043, 1227, 1535
StuI AGGCCT 1 cut(s) 286
StyD4I CCNGG 3 cut(s) 807, 999, 1435
StyI CCWWGG 2 cut(s) 755, 1226
TaaI ACNGT 4 cut(s) 543, 1081, 1344, 1370
TaiI ACGT 2 cut(s) 1034, 1137
TaqI TCGA 3 cut(s) 50, 378, 976
TasI AATT 5 cut(s) 147, 592, 1400, 1404, 1440
TatI WGTACW 7 cut(s) 114, 393, 426, 548, 657, 1344, 1486
Tru1I TTAA 7 cut(s) 36, 458, 596, 1269, 1293, 1403, 1559
Tru9I TTAA 7 cut(s) 36, 458, 596, 1269, 1293, 1403, 1559
TscAI CASTG 2 cut(s) 1027, 1375
TseFI GTSAC 1 cut(s) 743
Tsp45I GTSAC 1 cut(s) 743
TspDTI ATGAA 7 cut(s) 54, 260, 820, 905, 1100, 1116, 1413
TspGWI ACGGA 2 cut(s) 264, 1541
TspRI CASTG 2 cut(s) 1027, 1375
Tth111I GACNNNGTC 2 cut(s) 1054, 1370
VpaK11BI GGWCC 2 cut(s) 123, 251
VspI ATTAAT 1 cut(s) 1403
XapI RAATTY 2 cut(s) 592, 1440
XceI RCATGY 1 cut(s) 1286
XcmI CCANNNNNNNNNTGG 1 cut(s) 762
XmaJI CCTAGG 1 cut(s) 1226
XmiI GTMKAC 1 cut(s) 1034
XmnI GAANNNNTTC 2 cut(s) 606, 1404
XspI CTAG 6 cut(s) 203, 506, 800, 1043, 1227, 1535
ZrmI AGTACT 1 cut(s) 428
Zsp2I ATGCAT 1 cut(s) 1300
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.