pycom14g14080

Cytochrome p450

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr14
Physical Location & Seq
Reverse (-)
16828952 .. 16830143
1192 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom14g14080.1

Sequence Viewer

Length: 927 bp
ATGATGCTGGTGAATGAAACCACCTCCTCTTTGCAACCTTTAGCCTTCACACTTCTGGCGATTTTCATCATTCTCATATACAGATGGTACTCCTCCACCACAACCACCAACAAAACCTCATCACCCCCTTCTCCGCCAAAGCTCCCTATCATTGGAAACTTTCACCAAATAGACTTGTACCCTCATCGCTCACTGCAAACATTATCTCAACGCCATGGCCCTCTCATGCTTCTTCACTTCGGACATGTCCCAGTCCTTATTGTCTCTTCCGCTCAGGAAGCTCGGGAGATCATGAAAACCCATGACCTCACATTTTCTGATCGACCCAAGTCCACCAACTTTGAAAAGCTTCTCTACAACTATAAAGACGTTGCATCTGCTCCTTATGGTGAGTATTGGAGGCAGGTCAAAAGCTTATGTGTCATAAATCTTTTGAGCAACAAAAGGGTTCGCTCTTTTCGCTTTGTCAGAGAAGAGGAAACCAAAACCATGATCAGCAACATAATGAAGTCATCACCATCAGTTTTGAATTTAAGCGAAATGTTTGCGAGGCTTACTAATGATGTTGTATGTAGAGTCGCTCTGGGGAGGAAGTACAGTGGTGAAGGTGGGATGAAGTTTGCGGGACTTTTGGGGGAGTTCAATGAGTTATTGGGAACTACTAACATTGGGGACTATATCCCATGGCTTTCTTGGTTGAGCCGTGTCAACGGTTTGGAAGCCAGGTTCGACAAGGTGGCTAAGAAGTTTGATGACTTTTTAGATAACGTGGTCCAAGAGCATATGGGTCAGAGTTCAAGGAGTGGAGATGATAACCAACAGGATTTTGTCGATGTTTTGCTTGCATTTCAGAAAGAAAACTTGGCAGGTTTTCCTATTGAGACAGTTACTATTAAGGCTCTCATCTTGGTTTGCTGGTGGCACTGA

Protein Analysis

309

Amino Acids

35.1

Weight (kDa)

8.65

Isoelectric Point (pI)

44.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 42 - 299 2.2e-31 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000061)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G48270 AT3G48280 AT3G48290 AT3G48290 AT3G48300 AT3G48300 AT3G48310 AT3G48320 AT4G20235 AT4G20235
fragaria_vesca FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g36190 FvH4_3g14160 FvH4_3g14210 FvH4_3g14260 FvH4_3g14260 FvH4_3g21100 FvH4_3g21380 FvH4_4g24460 FvH4_4g24500 FvH4_5g06571 FvH4_5g06571 FvH4_5g06571 FvH4_5g06571 FvH4_5g06572 FvH4_5g06573 FvH4_5g06574 FvH4_5g06575 FvH4_5g06576 FvH4_5g06577 FvH4_5g06577 FvH4_5g07540 FvH4_5g07550 FvH4_5g07560 FvH4_5g07570 FvH4_5g29491 FvH4_5g29492 FvH4_6g23870 FvH4_6g23880 FvH4_6g26870 FvH4_7g11861 FvH4_7g11862 FvH4_7g13050 FvH4_7g13060 FvH4_7g13080 FvH4_7g13080 FvH4_7g22630 FvH4_7g22650 FvH4_7g22651 FvH4_7g23020
malus_domestica MD03G1207400.v1.1 MD03G1214800.v1.1 MD03G1218500.v1.1 MD06G1163100.v1.1 MD06G1163300.v1.1 MD06G1163400.v1.1 MD06G1163500.v1.1 MD06G1163600.v1.1 MD06G1163800.v1.1 MD06G1164000.v1.1 MD06G1164100.v1.1 MD06G1224400.v1.1 MD08G1222800.v1.1 MD08G1222900.v1.1 MD08G1223100.v1.1 MD11G1091500.v1.1 MD11G1091800.v1.1 MD14G1163200.v1.1 MD14G1169000.v1.1 MD15G1207200.v1.1 MD15G1207300.v1.1 MD17G1259400.v1.1
prunus_persica Prupe.4G198100_v2.0.a1 Prupe.4G199100_v2.0.a1 Prupe.4G199400_v2.0.a1 Prupe.4G199800_v2.0.a1 Prupe.4G225200_v2.0.a1 Prupe.4G239100_v2.0.a1 Prupe.5G156600_v2.0.a1 Prupe.5G163500_v2.0.a1 Prupe.7G209500_v2.0.a1 Prupe.I003400_v2.0.a1
pyrus_communis pycom03g16340 pycom06g14600 pycom06g14610 pycom06g14620 pycom06g14630 pycom06g14640 pycom06g14670 pycom06g14690 pycom08g19390 pycom08g19400 pycom08g19410 pycom11g07600 pycom11g07610 pycom11g07620 pycom11g07660 pycom14g13580 pycom14g14080 pycom14g14100 pycom14g14110 pycom15g18380 pycom17g26080
rosa_chinensis RchiOBHm_Chr1g0339441 RchiOBHm_Chr1g0339451 RchiOBHm_Chr1g0352191 RchiOBHm_Chr1g0368221 RchiOBHm_Chr2g0129531 RchiOBHm_Chr2g0129541 RchiOBHm_Chr3g0477631 RchiOBHm_Chr3g0482551 RchiOBHm_Chr3g0482561 RchiOBHm_Chr3g0482571 RchiOBHm_Chr4g0411601 RchiOBHm_Chr4g0422181 RchiOBHm_Chr5g0036661 RchiOBHm_Chr5g0036731 RchiOBHm_Chr6g0274021 RchiOBHm_Chr7g0190921 RchiOBHm_Chr7g0190931 RchiOBHm_Chr7g0190941 RchiOBHm_Chr7g0190951 RchiOBHm_Chr7g0190961 RchiOBHm_Chr7g0190971 RchiOBHm_Chr7g0191001 RchiOBHm_Chr7g0191011 RchiOBHm_Chr7g0191021 RchiOBHm_Chr7g0192181 RchiOBHm_Chr7g0192191 RchiOBHm_Chr7g0192201 RchiOBHm_Chr7g0192221 RchiOBHm_Chr7g0192231 RchiOBHm_Chr7g0192281 RchiOBHm_Chr7g0197311
rosa_laevigata RLG00000003942 RLG00000004345 RLG00000004379 RLG00000004383 RLG00000004384 RLG00000004385 RLG00000004387 RLG00000004388 RLG00000004389 RLG00000004480 RLG00000004481 RLG00000004482 RLG00000004483 RLG00000004485 RLG00000008342 RLG00000008401 RLG00000013583 RLG00000017044 RLG00000027229 RLG00000028349 RLG00000028350 RLG00000028353 RLG00000028820 RLG00000033707 RLG00000033710
rosa_multiflora Rmu_co8020340.1_g000001 Rmu_co8096640.1_g000001 Rmu_co8214930.1_g000001 Rmu_co8223272.1_g000001 Rmu_co8282535.1_g000001 Rmu_co8343567.1_g000001 Rmu_co8404191.1_g000001 Rmu_co8455157.1_g000001 Rmu_sc0000062.1_g000028 Rmu_sc0000082.1_g000091 Rmu_sc0000509.1_g000017 Rmu_sc0000775.1_g000001 Rmu_sc0000999.1_g000034 Rmu_sc0001559.1_g000004 Rmu_sc0001559.1_g000009 Rmu_sc0002164.1_g000001 Rmu_sc0002164.1_g000005 Rmu_sc0002164.1_g000007 Rmu_sc0002164.1_g000008 Rmu_sc0002164.1_g000009 Rmu_sc0002164.1_g000019 Rmu_sc0002247.1_g000009 Rmu_sc0002373.1_g000002 Rmu_sc0002373.1_g000003 Rmu_sc0002944.1_g000059 Rmu_sc0003930.1_g000004 Rmu_sc0004958.1_g000001 Rmu_sc0005197.1_g000014 Rmu_sc0005898.1_g000008 Rmu_sc0005898.1_g000009 Rmu_sc0005898.1_g000015 Rmu_sc0006059.1_g000004 Rmu_sc0006059.1_g000010 Rmu_sc0006903.1_g000007 Rmu_sc0006903.1_g000008 Rmu_sc0006968.1_g000001 Rmu_sc0011009.1_g000009 Rmu_sc0022852.1_g000002 Rmu_sc0033854.1_g000001 Rmu_ssc0000421.1_g000057 Rmu_ssc0000421.1_g000067 Rmu_ssc0000421.1_g000069 Rmu_ssc0000421.1_g000072 Rmu_ssc0000421.1_g000081 Rmu_ssc0000421.1_g000086
rosa_roxburghii Rroxscaffold_158G00443680 Rroxscaffold_158G00443710 Rroxscaffold_158G00443720 Rroxscaffold_158G00443740 Rroxscaffold_1G00034950 Rroxscaffold_1G00044240 Rroxscaffold_1G00044270 Rroxscaffold_3G00241380 Rroxscaffold_3G00247000 Rroxscaffold_3G00263120 Rroxscaffold_3G00263150 Rroxscaffold_3G00263160 Rroxscaffold_3G00263170 Rroxscaffold_3G00263180 Rroxscaffold_3G00263190 Rroxscaffold_3G00263210 Rroxscaffold_3G00263230 Rroxscaffold_3G00263260 Rroxscaffold_3G00264110 Rroxscaffold_3G00264130 Rroxscaffold_3G00264160 Rroxscaffold_3G00264180 Rroxscaffold_3G00264200 Rroxscaffold_4G00288750 Rroxscaffold_4G00303110 Rroxscaffold_4G00303120 Rroxscaffold_4G00322280 Rroxscaffold_5G00356200 Rroxscaffold_6G00399150 Rroxscaffold_6G00399290 Rroxscaffold_7G00194770
rosa_rugosa Rorug01G0225300 Rorug01G0225400 Rorug01G0225800 Rorug01G0226000 Rorug01G0339400 Rorug01G0451500 Rorug03G0196900 Rorug03G0294900 Rorug04G0107500 Rorug04G0107600 Rorug04G0129700 Rorug04G0178000 Rorug05G0144900.1 Rorug05G0145000 Rorug05G0228000 Rorug05G0228600 Rorug06G0078300 Rorug06G0508000 Rorug06G0508100 Rorug06G0508100 Rorug06G0508400 Rorug06G0513400 Rorug07G0000100 Rorug07G0000200 Rorug07G0000300 Rorug07G0000500 Rorug07G0000800
rosa_samantha Rh1BG060400 Rh1BG210300 Rh1BG210700 Rh1BG210800 Rh1BG309800 Rh1CG223800 Rh1CG224200 Rh1CG325200 Rh1DG237000 Rh1DG237400 Rh1DG341600 Rh2DG365700 Rh3AG212500 Rh3AG248400 Rh3CG239800 Rh3DG239300 Rh4AG169300 Rh4BG166200 Rh4BG240500 Rh4BG240600 Rh4DG163600 Rh5AG249600 Rh5AG249900 Rh5AG250000 Rh5CG283100 Rh5CG283200 Rh5CG283400 Rh5DG259200 Rh5DG259800 Rh6BG197700 Rh6CG197800 Rh6DG189400 Rh7AG114900 Rh7AG115000 Rh7AG115200 Rh7AG115300 Rh7AG115400 Rh7AG115500 Rh7AG123900 Rh7AG124100 Rh7AG124300 Rh7BG117200 Rh7BG117400 Rh7BG118400 Rh7BG125400 Rh7BG125600 Rh7BG125700 Rh7BG125800 Rh7BG125900 Rh7BG126000 Rh7BG126400 Rh7BG126600 Rh7BG126700 Rh7BG166200 Rh7DG118600 Rh7DG118700 Rh7DG118900 Rh7DG119000 Rh7DG119100 Rh7DG127400 Rh7DG127600 Rh7DG127700 Rh7DG127900 Rh7DG128200
rosa_wichuraiana Rw1G013270 Rw1G020790 Rw2G027890 Rw2G028040 Rw3G019240 Rw4G014070 Rw4G020540 Rw5G021320 Rw5G022970 Rw6G016920 Rw7G010020 Rw7G010040 Rw7G010580 Rw7G010590 Rw7G010600 Rw7G010610 Rw7G010620 Rw7G010630 Rw7G010640 Rw7G010690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 394, 857
AccBSI CCGCTC 1 cut(s) 272
AciI CCGC 3 cut(s) 134, 270, 623
AcsI RAATTY 1 cut(s) 529
AfaI GTAC 3 cut(s) 89, 179, 596
AfiI CCNNNNNNNGG 1 cut(s) 152
AflIII ACRYGT 1 cut(s) 244
AgsI TTSAA 4 cut(s) 344, 529, 643, 798
AjnI CCWGG 1 cut(s) 722
AjuI GAANNNNNNNTTGG 2 cut(s) 845, 877
AloI GAACNNNNNNTCC 2 cut(s) 710, 742
AluBI AGCT 4 cut(s) 142, 281, 349, 414
AluI AGCT 4 cut(s) 142, 281, 349, 414
Alw26I GTCTC 2 cut(s) 268, 875
Ama87I CYCGRG 1 cut(s) 282
AoxI GGCC 1 cut(s) 217
ApoI RAATTY 1 cut(s) 529
Asp700I GAANNNNTTC 1 cut(s) 348
AspS9I GGNCC 2 cut(s) 218, 772
AsuHPI GGTGA 6 cut(s) 22, 114, 155, 401, 507, 614
AvaI CYCGRG 1 cut(s) 282
AvaII GGWCC 1 cut(s) 772
BccI CCATC 2 cut(s) 78, 526
BceAI ACGGC 1 cut(s) 687
BcgI CGANNNNNNTGC 2 cut(s) 527, 561
BciT130I CCWGG 1 cut(s) 724
BclI TGATCA 1 cut(s) 492
BcoDI GTCTC 2 cut(s) 268, 875
BfuAI ACCTGC 2 cut(s) 394, 857
Bme1390I CCNGG 1 cut(s) 724
Bme18I GGWCC 1 cut(s) 772
BmeT110I CYCGRG 1 cut(s) 282
BmgT120I GGNCC 2 cut(s) 218, 772
BmrFI CCNGG 1 cut(s) 724
BmrI ACTGGG 1 cut(s) 245
BmsI GCATC 1 cut(s) 383
BmuI ACTGGG 1 cut(s) 245
BoxI GACNNNNGTC 1 cut(s) 328
Bpu10I CCTNAGC 1 cut(s) 273
BsaBI GATNNNNATC 1 cut(s) 65
BsaJI CCNNGG 2 cut(s) 214, 683
Bsc4I CCNNNNNNNGG 1 cut(s) 152
Bse1I ACTGG 1 cut(s) 251
Bse8I GATNNNNATC 1 cut(s) 65
BseBI CCWGG 1 cut(s) 724
BseDI CCNNGG 2 cut(s) 214, 683
BseGI GGATG 1 cut(s) 618
BseJI GATNNNNATC 1 cut(s) 65
BseLI CCNNNNNNNGG 1 cut(s) 152
BseMII CTCAG 1 cut(s) 287
BseNI ACTGG 1 cut(s) 251
BseRI GAGGAG 2 cut(s) 16, 82
BshFI GGCC 1 cut(s) 219
BsiHKCI CYCGRG 1 cut(s) 282
BslFI GGGAC 3 cut(s) 233, 639, 686
BslI CCNNNNNNNGG 1 cut(s) 152
BsmAI GTCTC 2 cut(s) 268, 875
BsmFI GGGAC 3 cut(s) 233, 639, 686
BsnI GGCC 1 cut(s) 219
BsoBI CYCGRG 1 cut(s) 282
Bsp143I GATC 3 cut(s) 288, 319, 492
Bsp19I CCATGG 2 cut(s) 214, 683
BspACI CCGC 3 cut(s) 134, 270, 623
BspANI GGCC 1 cut(s) 219
BspCNI CTCAG 1 cut(s) 286
BspHI TCATGA 1 cut(s) 291
BspMI ACCTGC 2 cut(s) 394, 857
BsrBI CCGCTC 1 cut(s) 272
BsrI ACTGG 1 cut(s) 251
BssECI CCNNGG 2 cut(s) 214, 683
BssMI GATC 3 cut(s) 288, 319, 492
BssT1I CCWWGG 2 cut(s) 214, 683
Bst2UI CCWGG 1 cut(s) 724
Bst4CI ACNGT 3 cut(s) 599, 713, 886
Bst6I CTCTTC 2 cut(s) 271, 468
BstC8I GCNNGC 1 cut(s) 843
BstDEI CTNAG 2 cut(s) 273, 741
BstDSI CCRYGG 2 cut(s) 214, 683
BstF5I GGATG 1 cut(s) 618
BstKTI GATC 3 cut(s) 291, 322, 495
BstMAI GTCTC 2 cut(s) 268, 875
BstMBI GATC 3 cut(s) 288, 319, 492
BstMWI GCNNNNNNNGC 2 cut(s) 278, 459
BstNI CCWGG 1 cut(s) 724
BstNSI RCATGY 1 cut(s) 248
BstPAI GACNNNNGTC 1 cut(s) 328
BstSCI CCNGG 1 cut(s) 722
BsuRI GGCC 1 cut(s) 219
BtgI CCRYGG 2 cut(s) 214, 683
BtgZI GCGATG 1 cut(s) 170
BtsCI GGATG 1 cut(s) 618
BtsI GCAGTG 1 cut(s) 191
BtsIMutI CAGTG 3 cut(s) 191, 604, 922
BveI ACCTGC 2 cut(s) 394, 857
Cac8I GCNNGC 1 cut(s) 843
CciI TCATGA 1 cut(s) 291
Cfr13I GGNCC 2 cut(s) 218, 772
Csp6I GTAC 3 cut(s) 88, 178, 595
CspCI CAANNNNNGTGG 2 cut(s) 322, 357
CviAII CATG 7 cut(s) 215, 226, 245, 292, 302, 490, 684
CviQI GTAC 3 cut(s) 88, 178, 595
DdeI CTNAG 2 cut(s) 273, 741
DpnI GATC 3 cut(s) 290, 321, 494
DpnII GATC 3 cut(s) 288, 319, 492
Eam1104I CTCTTC 2 cut(s) 271, 468
EarI CTCTTC 2 cut(s) 271, 468
EciI GGCGGA 1 cut(s) 123
Eco130I CCWWGG 2 cut(s) 214, 683
Eco47I GGWCC 1 cut(s) 772
Eco88I CYCGRG 1 cut(s) 282
EcoRII CCWGG 1 cut(s) 722
EcoT14I CCWWGG 2 cut(s) 214, 683
ErhI CCWWGG 2 cut(s) 214, 683
FaeI CATG 7 cut(s) 218, 229, 248, 295, 305, 493, 687
FaqI GGGAC 3 cut(s) 233, 639, 686
FatI CATG 7 cut(s) 214, 225, 244, 291, 301, 489, 683
FauI CCCGC 1 cut(s) 616
FauNDI CATATG 1 cut(s) 783
FbaI TGATCA 1 cut(s) 492
FokI GGATG 1 cut(s) 625
HaeIII GGCC 1 cut(s) 219
Hin1II CATG 7 cut(s) 218, 229, 248, 295, 305, 493, 687
HincII GTYRAC 1 cut(s) 709
HindII GTYRAC 1 cut(s) 709
HindIII AAGCTT 2 cut(s) 347, 412
HinfI GANTC 1 cut(s) 576
HphI GGTGA 6 cut(s) 22, 114, 155, 401, 507, 614
Hpy166II GTNNAC 2 cut(s) 333, 709
Hpy188I TCNGA 5 cut(s) 242, 319, 470, 792, 852
Hpy188III TCNNGA 3 cut(s) 275, 284, 292
Hpy8I GTNNAC 2 cut(s) 333, 709
HpyAV CCTTC 3 cut(s) 55, 138, 599
HpyCH4III ACNGT 3 cut(s) 599, 713, 886
HpyCH4IV ACGT 2 cut(s) 369, 768
HpyCH4V TGCA 4 cut(s) 34, 196, 374, 845
HpyF10VI GCNNNNNNNGC 2 cut(s) 278, 459
HpyF3I CTNAG 2 cut(s) 273, 741
HpySE526I ACGT 2 cut(s) 369, 768
Hsp92II CATG 7 cut(s) 218, 229, 248, 295, 305, 493, 687
Ksp22I TGATCA 1 cut(s) 492
Kzo9I GATC 3 cut(s) 288, 319, 492
LmnI GCTCC 2 cut(s) 147, 385
LweI GCATC 1 cut(s) 383
MaeII ACGT 2 cut(s) 369, 768
MaeIII GTNAC 1 cut(s) 886
MalI GATC 3 cut(s) 290, 321, 494
MbiI CCGCTC 1 cut(s) 272
MboI GATC 3 cut(s) 288, 319, 492
MboII GAAGA 3 cut(s) 224, 258, 485
MluCI AATT 1 cut(s) 529
MlyI GAGTC 1 cut(s) 585
MroXI GAANNNNTTC 1 cut(s) 348
MseI TTAA 2 cut(s) 533, 894
MspR9I CCNGG 1 cut(s) 724
MvaI CCWGG 1 cut(s) 724
MwoI GCNNNNNNNGC 2 cut(s) 278, 459
NcoI CCATGG 2 cut(s) 214, 683
NdeI CATATG 1 cut(s) 783
NdeII GATC 3 cut(s) 288, 319, 492
NlaIII CATG 7 cut(s) 218, 229, 248, 295, 305, 493, 687
NspI RCATGY 1 cut(s) 248
PagI TCATGA 1 cut(s) 291
PciI ACATGT 1 cut(s) 244
PdmI GAANNNNTTC 1 cut(s) 348
PleI GAGTC 1 cut(s) 584
PpsI GAGTC 1 cut(s) 584
PscI ACATGT 1 cut(s) 244
PshAI GACNNNNGTC 1 cut(s) 328
Psp6I CCWGG 1 cut(s) 722
PspGI CCWGG 1 cut(s) 722
PspPI GGNCC 2 cut(s) 218, 772
RsaI GTAC 3 cut(s) 89, 179, 596
RsaNI GTAC 3 cut(s) 88, 178, 595
SaqAI TTAA 2 cut(s) 533, 894
Sau3AI GATC 3 cut(s) 288, 319, 492
Sau96I GGNCC 2 cut(s) 218, 772
SchI GAGTC 1 cut(s) 585
ScrFI CCNGG 1 cut(s) 724
SfaNI GCATC 1 cut(s) 383
SinI GGWCC 1 cut(s) 772
Sse9I AATT 1 cut(s) 529
SsiI CCGC 3 cut(s) 134, 270, 623
StyD4I CCNGG 1 cut(s) 722
StyI CCWWGG 2 cut(s) 214, 683
TaaI ACNGT 3 cut(s) 599, 713, 886
TaiI ACGT 2 cut(s) 372, 771
TaqI TCGA 3 cut(s) 322, 729, 831
TasI AATT 1 cut(s) 529
TatI WGTACW 1 cut(s) 594
Tru1I TTAA 2 cut(s) 533, 894
Tru9I TTAA 2 cut(s) 533, 894
TscAI CASTG 2 cut(s) 198, 604
TspDTI ATGAA 5 cut(s) 30, 55, 308, 521, 629
TspRI CASTG 2 cut(s) 198, 604
VpaK11BI GGWCC 1 cut(s) 772
XapI RAATTY 1 cut(s) 529
XceI RCATGY 1 cut(s) 248
XcmI CCANNNNNNNNNTGG 1 cut(s) 690
XmnI GAANNNNTTC 1 cut(s) 348
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.