Rroxscaffold_1G00044240

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Forward (+)
63056783 .. 63059062
2280 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00044240.1

Sequence Viewer

Length: 1698 bp
ATGAGCCAGTCCGCTTCAGATTTTATAGATGAACCGGCCACTTTACATTGCAGAAACATCAACACGAATAGAATCCAAACAACTAAGTCGTGCAGGAAGAAGATGCCACATCTCCTGCAAATGCTGGAACTGAAACTAAATCAATTCTTCTTGATCCCTTTGGAATCATTTTCCTTCAAATATTTACTACTTGCGGCCATTTTCCTCATTCTCTTATACAGATGGTCCTCTGATAGAAACTCATCTGTACCACCTTCTCCACCAAAACTACCCATCATTGGAAATCTTCACCAAGTTGGGTTGCTCCCTCATCGCTCACTTCAAACCTTATCTCAACGCCATGGGCCTGTCATGCTGCTCCATTTCGGAAGCAGGCCAGTCCTTGTCATCTCGTCAGCTGAGGCTGCCTCCCAGATCTTCAAAACCCATGACTTAATATTCTCCGACAGACCCAAGTTCATCTTCTTTGAAAAGGTTGTCTACAACTACAAGGACATTGTATCGGCTCCTTATGGTGAGTACTGGAGGCAGCTCAGAAGTATATGTGTCTTAAATCTTTTGAGCAACAAAAGGGTTCGTTCTTTTCGTGCTGTAAGACAAGAGGAAACAAGATTAATGATAAGCAACATACTACAGTCCTGTAGTACTATATCATCTTCCTCCTCCTCATGCTCACCGGTTTTGAATCTAAGCGACATCTTTATGAAGCTGAGTAATAATGTCATATGCAGAGTTGCTATGGGGAGGAAGTACAGCGATCTCGGGGAAGATGGAGGGAAGATGTTCATGAAGATTGCTGGAGATCTGACAGAGTTCTTCACACGTGTTAATATTGGTGACTATATTCCATGGCTTGCTTGGTTCACTCGCCTCAGCGGGTTTGACGCTGAATTAGATGACCTGGCTAAACGAACGGATGCGTTTTTCGATATGGTTATTCAAGAGCATATTGATAAATCAAAGAGTGGAATTAATGACAATGAAGACCAGAAGGATTTTGTGGACGTATTGCTTGCGGTTCAGAAAGAAAATGCAGTTGGTGTCCCTATTGATCGAGTTGGCATAAAGGCAATCATCCTGGATATGTTTACCGGTGGTAGTGATACCACATTTACAACCTTAGAGTGGTTGATGTCTGACCTTTTGAAGAATCCAAGGGTGATGAAAAAATTGCAGAATGAGGTGAGGGGAGTAGTTAGAAACAAAGAAGATGTAACAGAGGATGATTTGGTTCGAATGCACTACTTGAAGGCAGTGATCAAAGAGACTTTTCGCTTACATCCTCCATTTCCATTACTTATTCCCAGGATGTCCAACCAAAATGTGAAAATCAACGGTTACAACATTAAGGCTAACACACAAGTTATGGTGAATGCATGGGCGATAGGAAGAGACCCCAAGTCATATACAAATGCCGAGCAGTATGAGCCAGAAAGATTCTTGAACAGTGCCATAGATTTTAAAGGGAATGATTTCGAATTAATTCCATTTGGTTCTGGTAGACGAGGATGCCCAGGAATGCATTTTGCCGTGGTTGGGGTAGAGATTGTTCTGGCAAATATTGTTCACAAGTTTGATTGGATGTTGCCGGATGGTGCAAGGGCGGAGGACTTAGACATGAGTGAATCCACTGGCATAACCGCACATAGAAAATATCCTCTCAAAGCGGTTGCCAAACCATATATTTCTTGCTTCTGA

Protein Analysis

565

Amino Acids

64.27

Weight (kDa)

8.89

Isoelectric Point (pI)

46.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 84 - 542 2.4e-103 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000061)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G48270 AT3G48280 AT3G48290 AT3G48290 AT3G48300 AT3G48300 AT3G48310 AT3G48320 AT4G20235 AT4G20235
fragaria_vesca FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g36190 FvH4_3g14160 FvH4_3g14210 FvH4_3g14260 FvH4_3g14260 FvH4_3g21100 FvH4_3g21380 FvH4_4g24460 FvH4_4g24500 FvH4_5g06571 FvH4_5g06571 FvH4_5g06571 FvH4_5g06571 FvH4_5g06572 FvH4_5g06573 FvH4_5g06574 FvH4_5g06575 FvH4_5g06576 FvH4_5g06577 FvH4_5g06577 FvH4_5g07540 FvH4_5g07550 FvH4_5g07560 FvH4_5g07570 FvH4_5g29491 FvH4_5g29492 FvH4_6g23870 FvH4_6g23880 FvH4_6g26870 FvH4_7g11861 FvH4_7g11862 FvH4_7g13050 FvH4_7g13060 FvH4_7g13080 FvH4_7g13080 FvH4_7g22630 FvH4_7g22650 FvH4_7g22651 FvH4_7g23020
malus_domestica MD03G1207400.v1.1 MD03G1214800.v1.1 MD03G1218500.v1.1 MD06G1163100.v1.1 MD06G1163300.v1.1 MD06G1163400.v1.1 MD06G1163500.v1.1 MD06G1163600.v1.1 MD06G1163800.v1.1 MD06G1164000.v1.1 MD06G1164100.v1.1 MD06G1224400.v1.1 MD08G1222800.v1.1 MD08G1222900.v1.1 MD08G1223100.v1.1 MD11G1091500.v1.1 MD11G1091800.v1.1 MD14G1163200.v1.1 MD14G1169000.v1.1 MD15G1207200.v1.1 MD15G1207300.v1.1 MD17G1259400.v1.1
prunus_persica Prupe.4G198100_v2.0.a1 Prupe.4G199100_v2.0.a1 Prupe.4G199400_v2.0.a1 Prupe.4G199800_v2.0.a1 Prupe.4G225200_v2.0.a1 Prupe.4G239100_v2.0.a1 Prupe.5G156600_v2.0.a1 Prupe.5G163500_v2.0.a1 Prupe.7G209500_v2.0.a1 Prupe.I003400_v2.0.a1
pyrus_communis pycom03g16340 pycom06g14600 pycom06g14610 pycom06g14620 pycom06g14630 pycom06g14640 pycom06g14670 pycom06g14690 pycom08g19390 pycom08g19400 pycom08g19410 pycom11g07600 pycom11g07610 pycom11g07620 pycom11g07660 pycom14g13580 pycom14g14080 pycom14g14100 pycom14g14110 pycom15g18380 pycom17g26080
rosa_chinensis RchiOBHm_Chr1g0339441 RchiOBHm_Chr1g0339451 RchiOBHm_Chr1g0352191 RchiOBHm_Chr1g0368221 RchiOBHm_Chr2g0129531 RchiOBHm_Chr2g0129541 RchiOBHm_Chr3g0477631 RchiOBHm_Chr3g0482551 RchiOBHm_Chr3g0482561 RchiOBHm_Chr3g0482571 RchiOBHm_Chr4g0411601 RchiOBHm_Chr4g0422181 RchiOBHm_Chr5g0036661 RchiOBHm_Chr5g0036731 RchiOBHm_Chr6g0274021 RchiOBHm_Chr7g0190921 RchiOBHm_Chr7g0190931 RchiOBHm_Chr7g0190941 RchiOBHm_Chr7g0190951 RchiOBHm_Chr7g0190961 RchiOBHm_Chr7g0190971 RchiOBHm_Chr7g0191001 RchiOBHm_Chr7g0191011 RchiOBHm_Chr7g0191021 RchiOBHm_Chr7g0192181 RchiOBHm_Chr7g0192191 RchiOBHm_Chr7g0192201 RchiOBHm_Chr7g0192221 RchiOBHm_Chr7g0192231 RchiOBHm_Chr7g0192281 RchiOBHm_Chr7g0197311
rosa_laevigata RLG00000003942 RLG00000004345 RLG00000004379 RLG00000004383 RLG00000004384 RLG00000004385 RLG00000004387 RLG00000004388 RLG00000004389 RLG00000004480 RLG00000004481 RLG00000004482 RLG00000004483 RLG00000004485 RLG00000008342 RLG00000008401 RLG00000013583 RLG00000017044 RLG00000027229 RLG00000028349 RLG00000028350 RLG00000028353 RLG00000028820 RLG00000033707 RLG00000033710
rosa_multiflora Rmu_co8020340.1_g000001 Rmu_co8096640.1_g000001 Rmu_co8214930.1_g000001 Rmu_co8223272.1_g000001 Rmu_co8282535.1_g000001 Rmu_co8343567.1_g000001 Rmu_co8404191.1_g000001 Rmu_co8455157.1_g000001 Rmu_sc0000062.1_g000028 Rmu_sc0000082.1_g000091 Rmu_sc0000509.1_g000017 Rmu_sc0000775.1_g000001 Rmu_sc0000999.1_g000034 Rmu_sc0001559.1_g000004 Rmu_sc0001559.1_g000009 Rmu_sc0002164.1_g000001 Rmu_sc0002164.1_g000005 Rmu_sc0002164.1_g000007 Rmu_sc0002164.1_g000008 Rmu_sc0002164.1_g000009 Rmu_sc0002164.1_g000019 Rmu_sc0002247.1_g000009 Rmu_sc0002373.1_g000002 Rmu_sc0002373.1_g000003 Rmu_sc0002944.1_g000059 Rmu_sc0003930.1_g000004 Rmu_sc0004958.1_g000001 Rmu_sc0005197.1_g000014 Rmu_sc0005898.1_g000008 Rmu_sc0005898.1_g000009 Rmu_sc0005898.1_g000015 Rmu_sc0006059.1_g000004 Rmu_sc0006059.1_g000010 Rmu_sc0006903.1_g000007 Rmu_sc0006903.1_g000008 Rmu_sc0006968.1_g000001 Rmu_sc0011009.1_g000009 Rmu_sc0022852.1_g000002 Rmu_sc0033854.1_g000001 Rmu_ssc0000421.1_g000057 Rmu_ssc0000421.1_g000067 Rmu_ssc0000421.1_g000069 Rmu_ssc0000421.1_g000072 Rmu_ssc0000421.1_g000081 Rmu_ssc0000421.1_g000086
rosa_roxburghii Rroxscaffold_158G00443680 Rroxscaffold_158G00443710 Rroxscaffold_158G00443720 Rroxscaffold_158G00443740 Rroxscaffold_1G00034950 Rroxscaffold_1G00044240 Rroxscaffold_1G00044270 Rroxscaffold_3G00241380 Rroxscaffold_3G00247000 Rroxscaffold_3G00263120 Rroxscaffold_3G00263150 Rroxscaffold_3G00263160 Rroxscaffold_3G00263170 Rroxscaffold_3G00263180 Rroxscaffold_3G00263190 Rroxscaffold_3G00263210 Rroxscaffold_3G00263230 Rroxscaffold_3G00263260 Rroxscaffold_3G00264110 Rroxscaffold_3G00264130 Rroxscaffold_3G00264160 Rroxscaffold_3G00264180 Rroxscaffold_3G00264200 Rroxscaffold_4G00288750 Rroxscaffold_4G00303110 Rroxscaffold_4G00303120 Rroxscaffold_4G00322280 Rroxscaffold_5G00356200 Rroxscaffold_6G00399150 Rroxscaffold_6G00399290 Rroxscaffold_7G00194770
rosa_rugosa Rorug01G0225300 Rorug01G0225400 Rorug01G0225800 Rorug01G0226000 Rorug01G0339400 Rorug01G0451500 Rorug03G0196900 Rorug03G0294900 Rorug04G0107500 Rorug04G0107600 Rorug04G0129700 Rorug04G0178000 Rorug05G0144900.1 Rorug05G0145000 Rorug05G0228000 Rorug05G0228600 Rorug06G0078300 Rorug06G0508000 Rorug06G0508100 Rorug06G0508100 Rorug06G0508400 Rorug06G0513400 Rorug07G0000100 Rorug07G0000200 Rorug07G0000300 Rorug07G0000500 Rorug07G0000800
rosa_samantha Rh1BG060400 Rh1BG210300 Rh1BG210700 Rh1BG210800 Rh1BG309800 Rh1CG223800 Rh1CG224200 Rh1CG325200 Rh1DG237000 Rh1DG237400 Rh1DG341600 Rh2DG365700 Rh3AG212500 Rh3AG248400 Rh3CG239800 Rh3DG239300 Rh4AG169300 Rh4BG166200 Rh4BG240500 Rh4BG240600 Rh4DG163600 Rh5AG249600 Rh5AG249900 Rh5AG250000 Rh5CG283100 Rh5CG283200 Rh5CG283400 Rh5DG259200 Rh5DG259800 Rh6BG197700 Rh6CG197800 Rh6DG189400 Rh7AG114900 Rh7AG115000 Rh7AG115200 Rh7AG115300 Rh7AG115400 Rh7AG115500 Rh7AG123900 Rh7AG124100 Rh7AG124300 Rh7BG117200 Rh7BG117400 Rh7BG118400 Rh7BG125400 Rh7BG125600 Rh7BG125700 Rh7BG125800 Rh7BG125900 Rh7BG126000 Rh7BG126400 Rh7BG126600 Rh7BG126700 Rh7BG166200 Rh7DG118600 Rh7DG118700 Rh7DG118900 Rh7DG119000 Rh7DG119100 Rh7DG127400 Rh7DG127600 Rh7DG127700 Rh7DG127900 Rh7DG128200
rosa_wichuraiana Rw1G013270 Rw1G020790 Rw2G027890 Rw2G028040 Rw3G019240 Rw4G014070 Rw4G020540 Rw5G021320 Rw5G022970 Rw6G016920 Rw7G010020 Rw7G010040 Rw7G010580 Rw7G010590 Rw7G010600 Rw7G010610 Rw7G010620 Rw7G010630 Rw7G010640 Rw7G010690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 480, 1501
AciI CCGC 7 cut(s) 12, 194, 876, 1016, 1604, 1641, 1667
AclWI GGATC 1 cut(s) 148
AcoI YGGCCR 2 cut(s) 36, 195
AcvI CACGTG 1 cut(s) 824
AfaI GTAC 4 cut(s) 249, 521, 646, 752
AfiI CCNNNNNNNGG 3 cut(s) 278, 1125, 1536
AflIII ACRYGT 2 cut(s) 821, 823
AgeI ACCGGT 2 cut(s) 676, 1091
AgsI TTSAA 9 cut(s) 178, 323, 421, 470, 685, 941, 1147, 1249, 1444
AhdI GACNNNNNGTC 1 cut(s) 1399
AjnI CCWGG 4 cut(s) 900, 1077, 1304, 1513
AjuI GAANNNNNNNTTGG 4 cut(s) 446, 478, 1020, 1052
AluBI AGCT 3 cut(s) 398, 532, 709
AluI AGCT 3 cut(s) 398, 532, 709
Alw26I GTCTC 2 cut(s) 1259, 1386
AlwI GGATC 1 cut(s) 148
Ama87I CYCGRG 1 cut(s) 761
AoxI GGCC 4 cut(s) 36, 195, 344, 374
ApeKI GCWGC 3 cut(s) 355, 404, 529
AseI ATTAAT 3 cut(s) 614, 972, 1481
AsiGI ACCGGT 2 cut(s) 676, 1091
Asp700I GAANNNNTTC 3 cut(s) 782, 1472, 1482
AspS9I GGNCC 2 cut(s) 225, 344
AsuHPI GGTGA 7 cut(s) 281, 527, 666, 848, 1171, 1195, 1381
AsuII TTCGAA 2 cut(s) 1234, 1476
AvaI CYCGRG 1 cut(s) 761
AvaII GGWCC 1 cut(s) 225
BbrPI CACGTG 1 cut(s) 824
BbsI GAAGAC 1 cut(s) 990
BbvCI CCTCAGC 2 cut(s) 399, 872
BbvI GCAGC 3 cut(s) 342, 391, 541
BccI CCATC 4 cut(s) 216, 281, 764, 1586
BceAI ACGGC 1 cut(s) 1514
BciT130I CCWGG 4 cut(s) 902, 1079, 1306, 1515
BclI TGATCA 1 cut(s) 1257
BcoDI GTCTC 2 cut(s) 1259, 1386
BfmI CTRYAG 2 cut(s) 632, 640
BglII AGATCT 2 cut(s) 414, 802
BisI GCNGC 4 cut(s) 195, 356, 405, 530
BlsI GCNGC 4 cut(s) 196, 357, 406, 531
BmcAI AGTACT 2 cut(s) 521, 646
Bme1390I CCNGG 4 cut(s) 902, 1079, 1306, 1515
Bme18I GGWCC 1 cut(s) 225
BmeRI GACNNNNNGTC 1 cut(s) 1399
BmeT110I CYCGRG 1 cut(s) 761
BmgT120I GGNCC 2 cut(s) 225, 344
BmiI GGNNCC 1 cut(s) 507
BmrFI CCNGG 4 cut(s) 902, 1079, 1306, 1515
BmsI GCATC 3 cut(s) 93, 907, 1499
BpiI GAAGAC 1 cut(s) 990
BplI GAGNNNNNCTC 2 cut(s) 392, 424
BpmI CTGGAG 2 cut(s) 544, 819
Bpu10I CCTNAGC 2 cut(s) 399, 872
Bpu14I TTCGAA 2 cut(s) 1234, 1476
BsaAI YACGTR 1 cut(s) 824
BsaI GGTCTC 1 cut(s) 1386
BsaJI CCNNGG 6 cut(s) 340, 848, 1154, 1304, 1513, 1530
BsaWI WCCGGW 2 cut(s) 676, 1091
Bsc4I CCNNNNNNNGG 3 cut(s) 278, 1125, 1536
Bse118I RCCGGY 3 cut(s) 34, 676, 1091
Bse1I ACTGG 4 cut(s) 7, 377, 527, 1636
Bse3DI GCAATG 1 cut(s) 46
BseBI CCWGG 4 cut(s) 902, 1079, 1306, 1515
BseDI CCNNGG 6 cut(s) 340, 848, 1154, 1304, 1513, 1530
BseGI GGATG 8 cut(s) 922, 1074, 1228, 1279, 1314, 1514, 1587, 1597
BseLI CCNNNNNNNGG 3 cut(s) 278, 1125, 1536
BseMI GCAATG 1 cut(s) 46
BseMII CTCAG 4 cut(s) 390, 547, 701, 886
BseNI ACTGG 4 cut(s) 7, 377, 527, 1636
BseRI GAGGAG 2 cut(s) 652, 655
BseXI GCAGC 3 cut(s) 342, 391, 541
BsgI GTGCAG 1 cut(s) 112
BshFI GGCC 4 cut(s) 38, 197, 346, 376
BshTI ACCGGT 2 cut(s) 676, 1091
BsiHKCI CYCGRG 1 cut(s) 761
BsiSI CCGG 4 cut(s) 35, 677, 1092, 1589
BslFI GGGAC 1 cut(s) 1028
BslI CCNNNNNNNGG 3 cut(s) 278, 1125, 1536
BsmAI GTCTC 2 cut(s) 1259, 1386
BsmFI GGGAC 1 cut(s) 1028
BsmI GAATGC 3 cut(s) 1242, 1378, 1524
BsnI GGCC 4 cut(s) 38, 197, 346, 376
Bso31I GGTCTC 1 cut(s) 1386
BsoBI CYCGRG 1 cut(s) 761
Bsp119I TTCGAA 2 cut(s) 1234, 1476
Bsp143I GATC 6 cut(s) 153, 414, 757, 802, 1051, 1257
Bsp19I CCATGG 2 cut(s) 340, 848
BspACI CCGC 7 cut(s) 12, 194, 876, 1016, 1604, 1641, 1667
BspANI GGCC 4 cut(s) 38, 197, 346, 376
BspCNI CTCAG 4 cut(s) 391, 546, 702, 885
BspHI TCATGA 1 cut(s) 786
BspLI GGNNCC 1 cut(s) 507
BspPI GGATC 1 cut(s) 148
BspT104I TTCGAA 2 cut(s) 1234, 1476
BspTNI GGTCTC 1 cut(s) 1386
BsrDI GCAATG 1 cut(s) 46
BsrFI RCCGGY 3 cut(s) 34, 676, 1091
BsrI ACTGG 4 cut(s) 7, 377, 527, 1636
BssAI RCCGGY 3 cut(s) 34, 676, 1091
BssECI CCNNGG 6 cut(s) 340, 848, 1154, 1304, 1513, 1530
BssMI GATC 6 cut(s) 153, 414, 757, 802, 1051, 1257
BssT1I CCWWGG 3 cut(s) 340, 848, 1154
Bst2UI CCWGG 4 cut(s) 902, 1079, 1306, 1515
Bst4CI ACNGT 3 cut(s) 636, 1337, 1448
Bst6I CTCTTC 1 cut(s) 1384
BstBAI YACGTR 1 cut(s) 824
BstBI TTCGAA 2 cut(s) 1234, 1476
BstC8I GCNNGC 3 cut(s) 374, 855, 1014
BstDEI CTNAG 8 cut(s) 84, 399, 533, 689, 710, 872, 1120, 1612
BstDSI CCRYGG 3 cut(s) 340, 848, 1530
BstF5I GGATG 8 cut(s) 922, 1074, 1228, 1279, 1314, 1514, 1587, 1597
BstKTI GATC 6 cut(s) 156, 417, 760, 805, 1054, 1260
BstMAI GTCTC 2 cut(s) 1259, 1386
BstMBI GATC 6 cut(s) 153, 414, 757, 802, 1051, 1257
BstMWI GCNNNNNNNGC 3 cut(s) 352, 404, 1426
BstNI CCWGG 4 cut(s) 902, 1079, 1306, 1515
BstSCI CCNGG 4 cut(s) 900, 1077, 1304, 1513
BstSFI CTRYAG 2 cut(s) 632, 640
BstV1I GCAGC 3 cut(s) 342, 391, 541
BstV2I GAAGAC 1 cut(s) 990
BstX2I RGATCY 2 cut(s) 414, 802
BstYI RGATCY 2 cut(s) 414, 802
BsuRI GGCC 4 cut(s) 38, 197, 346, 376
BtgI CCRYGG 3 cut(s) 340, 848, 1530
BtgZI GCGATG 1 cut(s) 296
BtsCI GGATG 8 cut(s) 922, 1074, 1228, 1279, 1314, 1514, 1587, 1597
BtsI GCAGTG 1 cut(s) 1260
BtsIMutI CAGTG 3 cut(s) 1260, 1453, 1629
Cac8I GCNNGC 3 cut(s) 374, 855, 1014
CciI TCATGA 1 cut(s) 786
Cfr10I RCCGGY 3 cut(s) 34, 676, 1091
Cfr13I GGNCC 2 cut(s) 225, 344
CseI GACGC 1 cut(s) 893
Csp6I GTAC 4 cut(s) 248, 520, 645, 751
CspAI ACCGGT 2 cut(s) 676, 1091
CviAII CATG 8 cut(s) 341, 352, 428, 669, 787, 849, 1377, 1618
CviQI GTAC 4 cut(s) 248, 520, 645, 751
DdeI CTNAG 8 cut(s) 84, 399, 533, 689, 710, 872, 1120, 1612
DpnI GATC 6 cut(s) 155, 416, 759, 804, 1053, 1259
DpnII GATC 6 cut(s) 153, 414, 757, 802, 1051, 1257
DraI TTTAAA 1 cut(s) 1462
DriI GACNNNNNGTC 1 cut(s) 1399
EaeI YGGCCR 2 cut(s) 36, 195
Eam1104I CTCTTC 1 cut(s) 1384
Eam1105I GACNNNNNGTC 1 cut(s) 1399
EarI CTCTTC 1 cut(s) 1384
EciI GGCGGA 1 cut(s) 1619
Eco130I CCWWGG 3 cut(s) 340, 848, 1154
Eco31I GGTCTC 1 cut(s) 1386
Eco47I GGWCC 1 cut(s) 225
Eco72I CACGTG 1 cut(s) 824
Eco88I CYCGRG 1 cut(s) 761
EcoRII CCWGG 4 cut(s) 900, 1077, 1304, 1513
EcoT14I CCWWGG 3 cut(s) 340, 848, 1154
EcoT22I ATGCAT 2 cut(s) 1378, 1524
ErhI CCWWGG 3 cut(s) 340, 848, 1154
FaeI CATG 8 cut(s) 344, 355, 431, 672, 790, 852, 1380, 1621
FalI AAGNNNNNCTT 2 cut(s) 446, 478
FaqI GGGAC 1 cut(s) 1028
FatI CATG 8 cut(s) 340, 351, 427, 668, 786, 848, 1376, 1617
FauI CCCGC 1 cut(s) 869
FauNDI CATATG 1 cut(s) 725
FbaI TGATCA 1 cut(s) 1257
FblI GTMKAC 2 cut(s) 480, 1501
Fnu4HI GCNGC 4 cut(s) 195, 356, 405, 530
FokI GGATG 8 cut(s) 929, 1061, 1235, 1266, 1321, 1521, 1594, 1604
Fsp4HI GCNGC 4 cut(s) 195, 356, 405, 530
GluI GCNGC 4 cut(s) 195, 356, 405, 530
GsuI CTGGAG 2 cut(s) 544, 819
HaeIII GGCC 4 cut(s) 38, 197, 346, 376
HapII CCGG 4 cut(s) 35, 677, 1092, 1589
HgaI GACGC 1 cut(s) 893
Hin1II CATG 8 cut(s) 344, 355, 431, 672, 790, 852, 1380, 1621
HinfI GANTC 6 cut(s) 72, 164, 685, 1150, 1437, 1625
HpaII CCGG 4 cut(s) 35, 677, 1092, 1589
HphI GGTGA 7 cut(s) 281, 527, 666, 848, 1171, 1195, 1381
Hpy166II GTNNAC 6 cut(s) 481, 864, 1003, 1089, 1502, 1567
Hpy188I TCNGA 9 cut(s) 19, 232, 368, 445, 536, 807, 1023, 1138, 1697
Hpy188III TCNNGA 4 cut(s) 151, 787, 941, 1441
Hpy8I GTNNAC 6 cut(s) 481, 864, 1003, 1089, 1502, 1567
HpyAV CCTTC 4 cut(s) 184, 264, 985, 1243
HpyCH4III ACNGT 3 cut(s) 636, 1337, 1448
HpyCH4IV ACGT 2 cut(s) 823, 1005
HpyF10VI GCNNNNNNNGC 3 cut(s) 352, 404, 1426
HpyF3I CTNAG 8 cut(s) 84, 399, 533, 689, 710, 872, 1120, 1612
HpySE526I ACGT 2 cut(s) 823, 1005
Hsp92II CATG 8 cut(s) 344, 355, 431, 672, 790, 852, 1380, 1621
Ksp22I TGATCA 1 cut(s) 1257
Kzo9I GATC 6 cut(s) 153, 414, 757, 802, 1051, 1257
LmnI GCTCC 3 cut(s) 309, 363, 511
Lsp1109I GCAGC 3 cut(s) 342, 391, 541
LweI GCATC 3 cut(s) 93, 907, 1499
MaeII ACGT 2 cut(s) 823, 1005
MaeIII GTNAC 3 cut(s) 836, 1213, 1337
MalI GATC 6 cut(s) 155, 416, 759, 804, 1053, 1259
MboI GATC 6 cut(s) 153, 414, 757, 802, 1051, 1257
MflI RGATCY 2 cut(s) 414, 802
MluCI AATT 6 cut(s) 143, 890, 969, 1169, 1478, 1482
MmeI TCCRAC 2 cut(s) 468, 1338
Mph1103I ATGCAT 2 cut(s) 1378, 1524
MroXI GAANNNNTTC 3 cut(s) 782, 1472, 1482
MseI TTAA 8 cut(s) 434, 551, 614, 828, 972, 1347, 1461, 1481
MslI CAYNNNNRTG 1 cut(s) 701
MspA1I CMGCKG 2 cut(s) 398, 876
MspI CCGG 4 cut(s) 35, 677, 1092, 1589
MspR9I CCNGG 4 cut(s) 902, 1079, 1306, 1515
Mva1269I GAATGC 3 cut(s) 1242, 1378, 1524
MvaI CCWGG 4 cut(s) 902, 1079, 1306, 1515
MwoI GCNNNNNNNGC 3 cut(s) 352, 404, 1426
NcoI CCATGG 2 cut(s) 340, 848
NdeI CATATG 1 cut(s) 725
NdeII GATC 6 cut(s) 153, 414, 757, 802, 1051, 1257
NlaIII CATG 8 cut(s) 344, 355, 431, 672, 790, 852, 1380, 1621
NlaIV GGNNCC 1 cut(s) 507
NmeAIII GCCGAG 1 cut(s) 1441
NmuCI GTSAC 1 cut(s) 836
NsiI ATGCAT 2 cut(s) 1378, 1524
NspV TTCGAA 2 cut(s) 1234, 1476
PagI TCATGA 1 cut(s) 786
PcsI WCGNNNNNNNCGW 1 cut(s) 583
PctI GAATGC 3 cut(s) 1242, 1378, 1524
PdmI GAANNNNTTC 3 cut(s) 782, 1472, 1482
PfeI GAWTC 6 cut(s) 72, 164, 685, 1150, 1437, 1625
PfoI TCCNGGA 1 cut(s) 1077
PinAI ACCGGT 2 cut(s) 676, 1091
PkrI GCNGC 4 cut(s) 196, 357, 406, 531
PmaCI CACGTG 1 cut(s) 824
PmlI CACGTG 1 cut(s) 824
Ppu21I YACGTR 1 cut(s) 824
PshBI ATTAAT 3 cut(s) 614, 972, 1481
Psp6I CCWGG 4 cut(s) 900, 1077, 1304, 1513
PspCI CACGTG 1 cut(s) 824
PspGI CCWGG 4 cut(s) 900, 1077, 1304, 1513
PspN4I GGNNCC 1 cut(s) 507
PspPI GGNCC 2 cut(s) 225, 344
PsrI GAACNNNNNNTAC 2 cut(s) 1533, 1565
PsuI RGATCY 2 cut(s) 414, 802
PvuII CAGCTG 1 cut(s) 398
RsaI GTAC 4 cut(s) 249, 521, 646, 752
RsaNI GTAC 4 cut(s) 248, 520, 645, 751
RseI CAYNNNNRTG 1 cut(s) 701
SaqAI TTAA 8 cut(s) 434, 551, 614, 828, 972, 1347, 1461, 1481
SatI GCNGC 4 cut(s) 195, 356, 405, 530
Sau3AI GATC 6 cut(s) 153, 414, 757, 802, 1051, 1257
Sau96I GGNCC 2 cut(s) 225, 344
ScaI AGTACT 2 cut(s) 521, 646
ScrFI CCNGG 4 cut(s) 902, 1079, 1306, 1515
SfaNI GCATC 3 cut(s) 93, 907, 1499
SfcI CTRYAG 2 cut(s) 632, 640
SfuI TTCGAA 2 cut(s) 1234, 1476
SinI GGWCC 1 cut(s) 225
SmiMI CAYNNNNRTG 1 cut(s) 701
Sse9I AATT 6 cut(s) 143, 890, 969, 1169, 1478, 1482
SsiI CCGC 7 cut(s) 12, 194, 876, 1016, 1604, 1641, 1667
SspI AATATT 4 cut(s) 182, 438, 832, 1561
StyD4I CCNGG 4 cut(s) 900, 1077, 1304, 1513
StyI CCWWGG 3 cut(s) 340, 848, 1154
TaaI ACNGT 3 cut(s) 636, 1337, 1448
TaiI ACGT 2 cut(s) 826, 1008
TaqI TCGA 4 cut(s) 927, 1054, 1234, 1476
TasI AATT 6 cut(s) 143, 890, 969, 1169, 1478, 1482
TatI WGTACW 3 cut(s) 519, 644, 750
TauI GCSGC 1 cut(s) 197
TfiI GAWTC 6 cut(s) 72, 164, 685, 1150, 1437, 1625
Tru1I TTAA 8 cut(s) 434, 551, 614, 828, 972, 1347, 1461, 1481
Tru9I TTAA 8 cut(s) 434, 551, 614, 828, 972, 1347, 1461, 1481
TscAI CASTG 3 cut(s) 1260, 1453, 1636
TseFI GTSAC 1 cut(s) 836
TseI GCWGC 3 cut(s) 355, 404, 529
Tsp45I GTSAC 1 cut(s) 836
TspDTI ATGAA 7 cut(s) 45, 448, 719, 775, 803, 996, 1178
TspGWI ACGGA 1 cut(s) 929
TspRI CASTG 3 cut(s) 1260, 1453, 1636
VpaK11BI GGWCC 1 cut(s) 225
VspI ATTAAT 3 cut(s) 614, 972, 1481
XcmI CCANNNNNNNNNTGG 1 cut(s) 855
XmiI GTMKAC 2 cut(s) 480, 1501
XmnI GAANNNNTTC 3 cut(s) 782, 1472, 1482
ZrmI AGTACT 2 cut(s) 521, 646
Zsp2I ATGCAT 2 cut(s) 1378, 1524
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.