Rroxscaffold_1G00034950

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Reverse (-)
50807560 .. 50810772
3213 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00034950.1

Sequence Viewer

Length: 1590 bp
ATGTTAGATCTCCAGCAAATGCTTGTTGCAAGATCCTCAAGCTTGTTACAGCATTTTTGCATGCAGCTAGTACTTCTGGCCATTTTCTTCGTCCTCTTATACAAATGGTATTCTTCAAAAAGCTCATCAGTACCACCTTCTCCACAAAAGCTGCCTGTGATCGGAAACCTTCACCAACTGGGTTTACACCCTCATCGTTCACTTCAAGCCCTAGCCCAAATCCATGGCCCTCTCATGCTGCTCCATTTAGGAAGCATGCCGGTCCTTATTGTCTCGTCGGCCCAGGCTGCTTGCAAGATCATGAAAACCCACGACCTCTCATTCTCCGACAGACCCAAGATGGCCTTTTTCAAGAAGCTTCTCTACAATTGCAAGGACGTTGCGACAGCACCGTATGGTGAGTACTGGAGGCGGCTTAAGAGTATATGTGTCTTGAACCTCATGAGCAACTCTAGGGTTCGGTCTTTTCGTTATGTGAGAGAAGAAGAAACGGAGTCTCTGATCAACAGCATCAAGCAGTCTTGTACTCCTTCTTCATCTTCATCAGCCTCGTTGTCCTCTGTTTTGAATCTAAGCGAAATGTTTCTGAGGCTTACTAATGATGTCATCTGTAGAGTAGCTTTGGGGAGGAAATACAGTGATCGCGGGGAAGGTCGAGGGAGGATGTTTATGAAGCTTTCTGTAGAGTTCACAGAGTTAATGGGGCGTTTAAATATCGGTGACTATATTCCATGGCTTGCTTGGGTTAGCCGTGTTAATGGCTTGGACGCTAAACTAGACAGTATGGCTAAACGGTTCGATGAATTTCTGGATATGGTTGTTCAAGAGCATATGGATAGTTCAAAGGGTTCTGAAGGAGACGAGGATGATGGCCATAAGGATTTAGTGGACGTTTTGCTTTCGGTTCAAAAAGAAAACACAGTCGGCCTTCCCATCGATAGAGTTAGCATAAAGGCTATCATCTTGGATATATTCGTGGCTGGCACCGATACTACATTTGGAACTTTAGAGTGGACGATGTCTGAGCTTTTCAAGCATCCAAGTGTTATGAAGAAATTGCAAAGTGAGGTAAGGAGAATAGTCGGAAACAAAAAAGACATAATAACAGAGGATAATTTGGTTGAAATCCCCTATTTGAAGGCAGTGATCAAGGAGTCTCTTCGCTTGCATCCTCCAGTTCCATTACTATTGCCCAGGATTGCTACCCAAGATGCAAAGATAAACGATTACAACATTTTGTCCGGCACACAAGTACTTGTTAATGCATGGCAGATTGGAAGGGATCCCAAGTCATACAAAGAACCAGAAGAGTTTAAACCAGAAAGATTTATGAACAATGCCATAGATTATAAAGGGAACGATGATTTCCAGTTTATTCCATTTGGGGCTGGTAGGAGGGGTTGTCCAGGAATTCAGTTTGCCATGGCTGTTCAAGAGATTGCCTTAGCAAATTTAATTTACAAGTTTGATTGGGTATTGCCTGACGGTGCAAGAGGGGAGGATTTAGACATGACTGAAGAAACTGGTCAAACTATACATAGAAAATATCCTCTTAAAGCCGTGGCTATTCCATATCCTTGCCAAGGTTAA

Protein Analysis

529

Amino Acids

59.76

Weight (kDa)

8.26

Isoelectric Point (pI)

44.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 45 - 506 1.2e-101 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000061)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G48270 AT3G48280 AT3G48290 AT3G48290 AT3G48300 AT3G48300 AT3G48310 AT3G48320 AT4G20235 AT4G20235
fragaria_vesca FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g36190 FvH4_3g14160 FvH4_3g14210 FvH4_3g14260 FvH4_3g14260 FvH4_3g21100 FvH4_3g21380 FvH4_4g24460 FvH4_4g24500 FvH4_5g06571 FvH4_5g06571 FvH4_5g06571 FvH4_5g06571 FvH4_5g06572 FvH4_5g06573 FvH4_5g06574 FvH4_5g06575 FvH4_5g06576 FvH4_5g06577 FvH4_5g06577 FvH4_5g07540 FvH4_5g07550 FvH4_5g07560 FvH4_5g07570 FvH4_5g29491 FvH4_5g29492 FvH4_6g23870 FvH4_6g23880 FvH4_6g26870 FvH4_7g11861 FvH4_7g11862 FvH4_7g13050 FvH4_7g13060 FvH4_7g13080 FvH4_7g13080 FvH4_7g22630 FvH4_7g22650 FvH4_7g22651 FvH4_7g23020
malus_domestica MD03G1207400.v1.1 MD03G1214800.v1.1 MD03G1218500.v1.1 MD06G1163100.v1.1 MD06G1163300.v1.1 MD06G1163400.v1.1 MD06G1163500.v1.1 MD06G1163600.v1.1 MD06G1163800.v1.1 MD06G1164000.v1.1 MD06G1164100.v1.1 MD06G1224400.v1.1 MD08G1222800.v1.1 MD08G1222900.v1.1 MD08G1223100.v1.1 MD11G1091500.v1.1 MD11G1091800.v1.1 MD14G1163200.v1.1 MD14G1169000.v1.1 MD15G1207200.v1.1 MD15G1207300.v1.1 MD17G1259400.v1.1
prunus_persica Prupe.4G198100_v2.0.a1 Prupe.4G199100_v2.0.a1 Prupe.4G199400_v2.0.a1 Prupe.4G199800_v2.0.a1 Prupe.4G225200_v2.0.a1 Prupe.4G239100_v2.0.a1 Prupe.5G156600_v2.0.a1 Prupe.5G163500_v2.0.a1 Prupe.7G209500_v2.0.a1 Prupe.I003400_v2.0.a1
pyrus_communis pycom03g16340 pycom06g14600 pycom06g14610 pycom06g14620 pycom06g14630 pycom06g14640 pycom06g14670 pycom06g14690 pycom08g19390 pycom08g19400 pycom08g19410 pycom11g07600 pycom11g07610 pycom11g07620 pycom11g07660 pycom14g13580 pycom14g14080 pycom14g14100 pycom14g14110 pycom15g18380 pycom17g26080
rosa_chinensis RchiOBHm_Chr1g0339441 RchiOBHm_Chr1g0339451 RchiOBHm_Chr1g0352191 RchiOBHm_Chr1g0368221 RchiOBHm_Chr2g0129531 RchiOBHm_Chr2g0129541 RchiOBHm_Chr3g0477631 RchiOBHm_Chr3g0482551 RchiOBHm_Chr3g0482561 RchiOBHm_Chr3g0482571 RchiOBHm_Chr4g0411601 RchiOBHm_Chr4g0422181 RchiOBHm_Chr5g0036661 RchiOBHm_Chr5g0036731 RchiOBHm_Chr6g0274021 RchiOBHm_Chr7g0190921 RchiOBHm_Chr7g0190931 RchiOBHm_Chr7g0190941 RchiOBHm_Chr7g0190951 RchiOBHm_Chr7g0190961 RchiOBHm_Chr7g0190971 RchiOBHm_Chr7g0191001 RchiOBHm_Chr7g0191011 RchiOBHm_Chr7g0191021 RchiOBHm_Chr7g0192181 RchiOBHm_Chr7g0192191 RchiOBHm_Chr7g0192201 RchiOBHm_Chr7g0192221 RchiOBHm_Chr7g0192231 RchiOBHm_Chr7g0192281 RchiOBHm_Chr7g0197311
rosa_laevigata RLG00000003942 RLG00000004345 RLG00000004379 RLG00000004383 RLG00000004384 RLG00000004385 RLG00000004387 RLG00000004388 RLG00000004389 RLG00000004480 RLG00000004481 RLG00000004482 RLG00000004483 RLG00000004485 RLG00000008342 RLG00000008401 RLG00000013583 RLG00000017044 RLG00000027229 RLG00000028349 RLG00000028350 RLG00000028353 RLG00000028820 RLG00000033707 RLG00000033710
rosa_multiflora Rmu_co8020340.1_g000001 Rmu_co8096640.1_g000001 Rmu_co8214930.1_g000001 Rmu_co8223272.1_g000001 Rmu_co8282535.1_g000001 Rmu_co8343567.1_g000001 Rmu_co8404191.1_g000001 Rmu_co8455157.1_g000001 Rmu_sc0000062.1_g000028 Rmu_sc0000082.1_g000091 Rmu_sc0000509.1_g000017 Rmu_sc0000775.1_g000001 Rmu_sc0000999.1_g000034 Rmu_sc0001559.1_g000004 Rmu_sc0001559.1_g000009 Rmu_sc0002164.1_g000001 Rmu_sc0002164.1_g000005 Rmu_sc0002164.1_g000007 Rmu_sc0002164.1_g000008 Rmu_sc0002164.1_g000009 Rmu_sc0002164.1_g000019 Rmu_sc0002247.1_g000009 Rmu_sc0002373.1_g000002 Rmu_sc0002373.1_g000003 Rmu_sc0002944.1_g000059 Rmu_sc0003930.1_g000004 Rmu_sc0004958.1_g000001 Rmu_sc0005197.1_g000014 Rmu_sc0005898.1_g000008 Rmu_sc0005898.1_g000009 Rmu_sc0005898.1_g000015 Rmu_sc0006059.1_g000004 Rmu_sc0006059.1_g000010 Rmu_sc0006903.1_g000007 Rmu_sc0006903.1_g000008 Rmu_sc0006968.1_g000001 Rmu_sc0011009.1_g000009 Rmu_sc0022852.1_g000002 Rmu_sc0033854.1_g000001 Rmu_ssc0000421.1_g000057 Rmu_ssc0000421.1_g000067 Rmu_ssc0000421.1_g000069 Rmu_ssc0000421.1_g000072 Rmu_ssc0000421.1_g000081 Rmu_ssc0000421.1_g000086
rosa_roxburghii Rroxscaffold_158G00443680 Rroxscaffold_158G00443710 Rroxscaffold_158G00443720 Rroxscaffold_158G00443740 Rroxscaffold_1G00034950 Rroxscaffold_1G00044240 Rroxscaffold_1G00044270 Rroxscaffold_3G00241380 Rroxscaffold_3G00247000 Rroxscaffold_3G00263120 Rroxscaffold_3G00263150 Rroxscaffold_3G00263160 Rroxscaffold_3G00263170 Rroxscaffold_3G00263180 Rroxscaffold_3G00263190 Rroxscaffold_3G00263210 Rroxscaffold_3G00263230 Rroxscaffold_3G00263260 Rroxscaffold_3G00264110 Rroxscaffold_3G00264130 Rroxscaffold_3G00264160 Rroxscaffold_3G00264180 Rroxscaffold_3G00264200 Rroxscaffold_4G00288750 Rroxscaffold_4G00303110 Rroxscaffold_4G00303120 Rroxscaffold_4G00322280 Rroxscaffold_5G00356200 Rroxscaffold_6G00399150 Rroxscaffold_6G00399290 Rroxscaffold_7G00194770
rosa_rugosa Rorug01G0225300 Rorug01G0225400 Rorug01G0225800 Rorug01G0226000 Rorug01G0339400 Rorug01G0451500 Rorug03G0196900 Rorug03G0294900 Rorug04G0107500 Rorug04G0107600 Rorug04G0129700 Rorug04G0178000 Rorug05G0144900.1 Rorug05G0145000 Rorug05G0228000 Rorug05G0228600 Rorug06G0078300 Rorug06G0508000 Rorug06G0508100 Rorug06G0508100 Rorug06G0508400 Rorug06G0513400 Rorug07G0000100 Rorug07G0000200 Rorug07G0000300 Rorug07G0000500 Rorug07G0000800
rosa_samantha Rh1BG060400 Rh1BG210300 Rh1BG210700 Rh1BG210800 Rh1BG309800 Rh1CG223800 Rh1CG224200 Rh1CG325200 Rh1DG237000 Rh1DG237400 Rh1DG341600 Rh2DG365700 Rh3AG212500 Rh3AG248400 Rh3CG239800 Rh3DG239300 Rh4AG169300 Rh4BG166200 Rh4BG240500 Rh4BG240600 Rh4DG163600 Rh5AG249600 Rh5AG249900 Rh5AG250000 Rh5CG283100 Rh5CG283200 Rh5CG283400 Rh5DG259200 Rh5DG259800 Rh6BG197700 Rh6CG197800 Rh6DG189400 Rh7AG114900 Rh7AG115000 Rh7AG115200 Rh7AG115300 Rh7AG115400 Rh7AG115500 Rh7AG123900 Rh7AG124100 Rh7AG124300 Rh7BG117200 Rh7BG117400 Rh7BG118400 Rh7BG125400 Rh7BG125600 Rh7BG125700 Rh7BG125800 Rh7BG125900 Rh7BG126000 Rh7BG126400 Rh7BG126600 Rh7BG126700 Rh7BG166200 Rh7DG118600 Rh7DG118700 Rh7DG118900 Rh7DG119000 Rh7DG119100 Rh7DG127400 Rh7DG127600 Rh7DG127700 Rh7DG127900 Rh7DG128200
rosa_wichuraiana Rw1G013270 Rw1G020790 Rw2G027890 Rw2G028040 Rw3G019240 Rw4G014070 Rw4G020540 Rw5G021320 Rw5G022970 Rw6G016920 Rw7G010020 Rw7G010040 Rw7G010580 Rw7G010590 Rw7G010600 Rw7G010610 Rw7G010620 Rw7G010630 Rw7G010640 Rw7G010690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1350
AccB1I GGYRCC 1 cut(s) 983
AccII CGCG 1 cut(s) 645
AciI CCGC 2 cut(s) 412, 645
AclWI GGATC 3 cut(s) 27, 1277, 1290
AcoI YGGCCR 2 cut(s) 78, 871
AcsI RAATTY 3 cut(s) 803, 1410, 1450
AcuI CTGAAG 2 cut(s) 873, 1536
AfaI GTAC 5 cut(s) 72, 132, 404, 526, 1254
AfiI CCNNNNNNNGG 2 cut(s) 161, 1583
AflII CTTAAG 1 cut(s) 416
AjnI CCWGG 3 cut(s) 282, 1193, 1405
AluBI AGCT 8 cut(s) 42, 67, 123, 151, 358, 620, 676, 1027
AluI AGCT 8 cut(s) 42, 67, 123, 151, 358, 620, 676, 1027
Alw26I GTCTC 4 cut(s) 277, 501, 852, 1161
AlwI GGATC 3 cut(s) 27, 1277, 1290
AoxI GGCC 6 cut(s) 78, 226, 279, 342, 871, 925
ApeKI GCWGC 4 cut(s) 64, 151, 238, 287
ApoI RAATTY 3 cut(s) 803, 1410, 1450
Asp700I GAANNNNTTC 1 cut(s) 582
AspS9I GGNCC 3 cut(s) 227, 262, 280
AsuHPI GGTGA 3 cut(s) 164, 410, 731
AvaII GGWCC 1 cut(s) 262
BalI TGGCCA 2 cut(s) 80, 873
BamHI GGATCC 1 cut(s) 1282
BanI GGYRCC 1 cut(s) 983
BarI GAAGNNNNNNTAC 4 cut(s) 347, 379, 517, 549
BbvI GCAGC 4 cut(s) 76, 138, 225, 274
BccI CCATC 3 cut(s) 334, 863, 941
BceAI ACGGC 2 cut(s) 735, 1544
BciT130I CCWGG 3 cut(s) 284, 1195, 1407
BclI TGATCA 2 cut(s) 501, 1146
BcoDI GTCTC 4 cut(s) 277, 501, 852, 1161
BfaI CTAG 4 cut(s) 68, 212, 453, 776
BfmI CTRYAG 2 cut(s) 610, 681
BfrI CTTAAG 1 cut(s) 416
BglII AGATCT 1 cut(s) 7
BisI GCNGC 5 cut(s) 65, 152, 239, 288, 413
BlsI GCNGC 5 cut(s) 66, 153, 240, 289, 414
BmcAI AGTACT 3 cut(s) 72, 404, 1254
Bme1390I CCNGG 3 cut(s) 284, 1195, 1407
Bme18I GGWCC 1 cut(s) 262
BmgT120I GGNCC 3 cut(s) 227, 262, 280
BmiI GGNNCC 2 cut(s) 985, 1284
BmrFI CCNGG 3 cut(s) 284, 1195, 1407
BmrI ACTGGG 1 cut(s) 188
BmsI GCATC 4 cut(s) 519, 1045, 1177, 1201
BmuI ACTGGG 1 cut(s) 188
BpmI CTGGAG 2 cut(s) 427, 1158
Bpu10I CCTNAGC 1 cut(s) 1444
BpuEI CTTGAG 1 cut(s) 22
Bsa29I ATCGAT 1 cut(s) 936
BsaJI CCNNGG 7 cut(s) 223, 282, 731, 1193, 1422, 1560, 1582
BsaXI ACNNNNNCTCC 2 cut(s) 1387, 1417
Bsc4I CCNNNNNNNGG 2 cut(s) 161, 1583
Bse118I RCCGGY 1 cut(s) 259
Bse1I ACTGG 5 cut(s) 183, 410, 1175, 1369, 1528
BseBI CCWGG 3 cut(s) 284, 1195, 1407
BseCI ATCGAT 1 cut(s) 936
BseDI CCNNGG 7 cut(s) 223, 282, 731, 1193, 1422, 1560, 1582
BseGI GGATG 4 cut(s) 669, 871, 1036, 1168
BseLI CCNNNNNNNGG 2 cut(s) 161, 1583
BseMII CTCAG 2 cut(s) 578, 1014
BseNI ACTGG 5 cut(s) 183, 410, 1175, 1369, 1528
BseXI GCAGC 4 cut(s) 76, 138, 225, 274
Bsh1236I CGCG 1 cut(s) 645
BshFI GGCC 6 cut(s) 80, 228, 281, 344, 873, 927
BshNI GGYRCC 1 cut(s) 983
BshVI ATCGAT 1 cut(s) 936
BsiSI CCGG 2 cut(s) 260, 1242
BslI CCNNNNNNNGG 2 cut(s) 161, 1583
BsmAI GTCTC 4 cut(s) 277, 501, 852, 1161
BsmBI CGTCTC 1 cut(s) 852
BsnI GGCC 6 cut(s) 80, 228, 281, 344, 873, 927
Bsp143I GATC 8 cut(s) 7, 32, 159, 297, 501, 640, 1146, 1282
Bsp19I CCATGG 3 cut(s) 223, 731, 1422
BspACI CCGC 2 cut(s) 412, 645
BspANI GGCC 6 cut(s) 80, 228, 281, 344, 873, 927
BspCNI CTCAG 2 cut(s) 579, 1015
BspDI ATCGAT 1 cut(s) 936
BspFNI CGCG 1 cut(s) 645
BspHI TCATGA 2 cut(s) 300, 441
BspLI GGNNCC 2 cut(s) 985, 1284
BspPI GGATC 3 cut(s) 27, 1277, 1290
BspT107I GGYRCC 1 cut(s) 983
BspTI CTTAAG 1 cut(s) 416
BsrFI RCCGGY 1 cut(s) 259
BsrI ACTGG 5 cut(s) 183, 410, 1175, 1369, 1528
BssAI RCCGGY 1 cut(s) 259
BssECI CCNNGG 7 cut(s) 223, 282, 731, 1193, 1422, 1560, 1582
BssMI GATC 8 cut(s) 7, 32, 159, 297, 501, 640, 1146, 1282
BssT1I CCWWGG 4 cut(s) 223, 731, 1422, 1582
Bst2UI CCWGG 3 cut(s) 284, 1195, 1407
Bst4CI ACNGT 6 cut(s) 393, 638, 782, 795, 922, 1487
Bst6I CTCTTC 2 cut(s) 1164, 1302
BstAFI CTTAAG 1 cut(s) 416
BstC8I GCNNGC 6 cut(s) 62, 257, 292, 738, 982, 1166
BstDEI CTNAG 4 cut(s) 572, 587, 1023, 1444
BstDSI CCRYGG 4 cut(s) 223, 731, 1422, 1560
BstENI CCTNNNNNAGG 1 cut(s) 1581
BstF5I GGATG 4 cut(s) 669, 871, 1036, 1168
BstFNI CGCG 1 cut(s) 645
BstKTI GATC 8 cut(s) 10, 35, 162, 300, 504, 643, 1149, 1285
BstMAI GTCTC 4 cut(s) 277, 501, 852, 1161
BstMBI GATC 8 cut(s) 7, 32, 159, 297, 501, 640, 1146, 1282
BstMWI GCNNNNNNNGC 2 cut(s) 287, 1033
BstNI CCWGG 3 cut(s) 284, 1195, 1407
BstNSI RCATGY 2 cut(s) 64, 259
BstSCI CCNGG 3 cut(s) 282, 1193, 1405
BstSFI CTRYAG 2 cut(s) 610, 681
BstUI CGCG 1 cut(s) 645
BstV1I GCAGC 4 cut(s) 76, 138, 225, 274
BstX2I RGATCY 3 cut(s) 7, 32, 1282
BstXI CCANNNNNNTGG 1 cut(s) 224
BstYI RGATCY 3 cut(s) 7, 32, 1282
Bsu15I ATCGAT 1 cut(s) 936
BsuRI GGCC 6 cut(s) 80, 228, 281, 344, 873, 927
BsuTUI ATCGAT 1 cut(s) 936
BtgI CCRYGG 4 cut(s) 223, 731, 1422, 1560
BtsCI GGATG 4 cut(s) 669, 871, 1036, 1168
BtsI GCAGTG 1 cut(s) 1149
BtsIMutI CAGTG 2 cut(s) 643, 1149
Cac8I GCNNGC 6 cut(s) 62, 257, 292, 738, 982, 1166
CciI TCATGA 2 cut(s) 300, 441
Cfr10I RCCGGY 1 cut(s) 259
Cfr13I GGNCC 3 cut(s) 227, 262, 280
ClaI ATCGAT 1 cut(s) 936
CseI GACGC 1 cut(s) 776
Csp6I GTAC 5 cut(s) 71, 131, 403, 525, 1253
CviQI GTAC 5 cut(s) 71, 131, 403, 525, 1253
DdeI CTNAG 4 cut(s) 572, 587, 1023, 1444
DpnI GATC 8 cut(s) 9, 34, 161, 299, 503, 642, 1148, 1284
DpnII GATC 8 cut(s) 7, 32, 159, 297, 501, 640, 1146, 1282
DraI TTTAAA 2 cut(s) 711, 1315
EaeI YGGCCR 2 cut(s) 78, 871
Eam1104I CTCTTC 2 cut(s) 1164, 1302
EarI CTCTTC 2 cut(s) 1164, 1302
Eco130I CCWWGG 4 cut(s) 223, 731, 1422, 1582
Eco47I GGWCC 1 cut(s) 262
Eco57I CTGAAG 2 cut(s) 873, 1536
EcoNI CCTNNNNNAGG 1 cut(s) 1581
EcoRI GAATTC 1 cut(s) 1410
EcoRII CCWGG 3 cut(s) 282, 1193, 1405
EcoT14I CCWWGG 4 cut(s) 223, 731, 1422, 1582
EcoT22I ATGCAT 1 cut(s) 1267
ErhI CCWWGG 4 cut(s) 223, 731, 1422, 1582
Esp3I CGTCTC 1 cut(s) 852
FalI AAGNNNNNCTT 2 cut(s) 329, 361
FauI CCCGC 1 cut(s) 638
FauNDI CATATG 1 cut(s) 831
FbaI TGATCA 2 cut(s) 501, 1146
Fnu4HI GCNGC 5 cut(s) 65, 152, 239, 288, 413
FokI GGATG 4 cut(s) 676, 878, 1023, 1155
Fsp4HI GCNGC 5 cut(s) 65, 152, 239, 288, 413
FspBI CTAG 4 cut(s) 68, 212, 453, 776
GluI GCNGC 5 cut(s) 65, 152, 239, 288, 413
GsuI CTGGAG 2 cut(s) 427, 1158
HaeIII GGCC 6 cut(s) 80, 228, 281, 344, 873, 927
HapII CCGG 2 cut(s) 260, 1242
HgaI GACGC 1 cut(s) 776
HindIII AAGCTT 3 cut(s) 40, 356, 674
HinfI GANTC 3 cut(s) 494, 568, 1154
HpaII CCGG 2 cut(s) 260, 1242
HphI GGTGA 3 cut(s) 164, 410, 731
Hpy166II GTNNAC 5 cut(s) 185, 200, 690, 889, 1014
Hpy188I TCNGA 7 cut(s) 164, 328, 501, 588, 853, 1024, 1085
Hpy188III TCNNGA 7 cut(s) 301, 352, 433, 442, 809, 824, 1433
Hpy8I GTNNAC 5 cut(s) 185, 200, 690, 889, 1014
Hpy99I CGWCG 1 cut(s) 280
HpyAV CCTTC 8 cut(s) 147, 179, 540, 644, 848, 938, 1132, 1272
HpyCH4III ACNGT 6 cut(s) 393, 638, 782, 795, 922, 1487
HpyCH4IV ACGT 2 cut(s) 378, 891
HpyF10VI GCNNNNNNNGC 2 cut(s) 287, 1033
HpyF3I CTNAG 4 cut(s) 572, 587, 1023, 1444
HpySE526I ACGT 2 cut(s) 378, 891
Ksp22I TGATCA 2 cut(s) 501, 1146
Kzo9I GATC 8 cut(s) 7, 32, 159, 297, 501, 640, 1146, 1282
LmnI GCTCC 1 cut(s) 246
Lsp1109I GCAGC 4 cut(s) 76, 138, 225, 274
LweI GCATC 4 cut(s) 519, 1045, 1177, 1201
MaeI CTAG 4 cut(s) 68, 212, 453, 776
MaeII ACGT 2 cut(s) 378, 891
MaeIII GTNAC 2 cut(s) 45, 719
MalI GATC 8 cut(s) 9, 34, 161, 299, 503, 642, 1148, 1284
MboI GATC 8 cut(s) 7, 32, 159, 297, 501, 640, 1146, 1282
MfeI CAATTG 1 cut(s) 367
MflI RGATCY 3 cut(s) 7, 32, 1282
MlsI TGGCCA 2 cut(s) 80, 873
MluCI AATT 7 cut(s) 367, 803, 1055, 1114, 1410, 1450, 1455
MluNI TGGCCA 2 cut(s) 80, 873
MlyI GAGTC 2 cut(s) 503, 1163
MmeI TCCRAC 2 cut(s) 351, 1063
Mox20I TGGCCA 2 cut(s) 80, 873
Mph1103I ATGCAT 1 cut(s) 1267
MroXI GAANNNNTTC 1 cut(s) 582
MscI TGGCCA 2 cut(s) 80, 873
MseI TTAA 9 cut(s) 417, 698, 710, 756, 1260, 1314, 1454, 1554, 1588
MslI CAYNNNNRTG 1 cut(s) 1041
Msp20I TGGCCA 2 cut(s) 80, 873
MspCI CTTAAG 1 cut(s) 416
MspI CCGG 2 cut(s) 260, 1242
MspR9I CCNGG 3 cut(s) 284, 1195, 1407
MssI GTTTAAAC 1 cut(s) 1315
MunI CAATTG 1 cut(s) 367
MvaI CCWGG 3 cut(s) 284, 1195, 1407
MvnI CGCG 1 cut(s) 645
MwoI GCNNNNNNNGC 2 cut(s) 287, 1033
NcoI CCATGG 3 cut(s) 223, 731, 1422
NdeI CATATG 1 cut(s) 831
NdeII GATC 8 cut(s) 7, 32, 159, 297, 501, 640, 1146, 1282
NlaIV GGNNCC 2 cut(s) 985, 1284
NmuCI GTSAC 1 cut(s) 719
NsiI ATGCAT 1 cut(s) 1267
NspI RCATGY 2 cut(s) 64, 259
PaeI GCATGC 2 cut(s) 64, 259
PagI TCATGA 2 cut(s) 300, 441
PcsI WCGNNNNNNNCGW 1 cut(s) 466
PdmI GAANNNNTTC 1 cut(s) 582
PfeI GAWTC 1 cut(s) 568
PflFI GACNNNGTC 1 cut(s) 1018
PfoI TCCNGGA 1 cut(s) 1405
PkrI GCNGC 5 cut(s) 66, 153, 240, 289, 414
PleI GAGTC 2 cut(s) 502, 1162
PmeI GTTTAAAC 1 cut(s) 1315
PpsI GAGTC 2 cut(s) 502, 1162
PsiI TTATAA 1 cut(s) 1350
Psp6I CCWGG 3 cut(s) 282, 1193, 1405
PspGI CCWGG 3 cut(s) 282, 1193, 1405
PspN4I GGNNCC 2 cut(s) 985, 1284
PspPI GGNCC 3 cut(s) 227, 262, 280
PsuI RGATCY 3 cut(s) 7, 32, 1282
PsyI GACNNNGTC 1 cut(s) 1018
RsaI GTAC 5 cut(s) 72, 132, 404, 526, 1254
RsaNI GTAC 5 cut(s) 71, 131, 403, 525, 1253
RseI CAYNNNNRTG 1 cut(s) 1041
SaqAI TTAA 9 cut(s) 417, 698, 710, 756, 1260, 1314, 1454, 1554, 1588
SatI GCNGC 5 cut(s) 65, 152, 239, 288, 413
Sau3AI GATC 8 cut(s) 7, 32, 159, 297, 501, 640, 1146, 1282
Sau96I GGNCC 3 cut(s) 227, 262, 280
ScaI AGTACT 3 cut(s) 72, 404, 1254
SchI GAGTC 2 cut(s) 503, 1163
ScrFI CCNGG 3 cut(s) 284, 1195, 1407
SfaNI GCATC 4 cut(s) 519, 1045, 1177, 1201
SfcI CTRYAG 2 cut(s) 610, 681
SinI GGWCC 1 cut(s) 262
SmiMI CAYNNNNRTG 1 cut(s) 1041
SmlI CTYRAG 2 cut(s) 37, 416
SmoI CTYRAG 2 cut(s) 37, 416
SphI GCATGC 2 cut(s) 64, 259
Sse9I AATT 7 cut(s) 367, 803, 1055, 1114, 1410, 1450, 1455
SsiI CCGC 2 cut(s) 412, 645
SspMI CTAG 4 cut(s) 68, 212, 453, 776
StyD4I CCNGG 3 cut(s) 282, 1193, 1405
StyI CCWWGG 4 cut(s) 223, 731, 1422, 1582
TaaI ACNGT 6 cut(s) 393, 638, 782, 795, 922, 1487
TaiI ACGT 2 cut(s) 381, 894
TaqI TCGA 3 cut(s) 655, 798, 936
TaqII GACCGA 1 cut(s) 450
TasI AATT 7 cut(s) 367, 803, 1055, 1114, 1410, 1450, 1455
TatI WGTACW 4 cut(s) 70, 402, 524, 1252
TauI GCSGC 1 cut(s) 415
TfiI GAWTC 1 cut(s) 568
Tru1I TTAA 9 cut(s) 417, 698, 710, 756, 1260, 1314, 1454, 1554, 1588
Tru9I TTAA 9 cut(s) 417, 698, 710, 756, 1260, 1314, 1454, 1554, 1588
TscAI CASTG 2 cut(s) 643, 1149
TseFI GTSAC 1 cut(s) 719
TseI GCWGC 4 cut(s) 64, 151, 238, 287
Tsp45I GTSAC 1 cut(s) 719
TspDTI ATGAA 7 cut(s) 317, 525, 531, 686, 816, 1064, 1346
TspGWI ACGGA 1 cut(s) 506
TspRI CASTG 2 cut(s) 643, 1149
Tth111I GACNNNGTC 1 cut(s) 1018
Vha464I CTTAAG 1 cut(s) 416
VpaK11BI GGWCC 1 cut(s) 262
XagI CCTNNNNNAGG 1 cut(s) 1581
XapI RAATTY 3 cut(s) 803, 1410, 1450
XceI RCATGY 2 cut(s) 64, 259
XcmI CCANNNNNNNNNTGG 1 cut(s) 738
XmnI GAANNNNTTC 1 cut(s) 582
XspI CTAG 4 cut(s) 68, 212, 453, 776
ZrmI AGTACT 3 cut(s) 72, 404, 1254
Zsp2I ATGCAT 1 cut(s) 1267
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.