FvH4_5g06574

Cytochrome p450

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
Physical Location & Seq
Forward (+)
3876306 .. 3879171
2866 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g06574.t1

Sequence Viewer

Length: 759 bp
ATGGGGGTTTTGAAAATGAGAGGCGAGAGTGGTGGAGATGGGAGTGGAGAGGGAGGGAAGGATTTTGTGGATGTACTGCTTGAAGTTCGAAGCTCTGGCAATGAGGGCTCTTCGATTGATAGAGATAGCATTAAAGGTATCATCTTGGATATGTTTTCTGGTGGAACTGATACAACATACACAGTTTTAGAGTGGGCAATGACCGAAATCTTGAGGCATCCCAGAGTTTGTGGAAAACTGCAAATTGAGGCGTTGGAAATTGCTAATGGCAAACCAGACATCACAGAAAGTGATTTAGATAACATGCGCTACTTGAAAGCAGTGATCAAAGAGACACTTCGGCTACATCCGCCAATACCATTACTCGCCCCTCGTGAATCAACTGAAGTTGTTAAGATAATGGAACACGATATAGAAGCAAAAACTATGGTCTTTATCAATGCTTGGGCAATTGGAAGAGACCCAGCAGAGTGGGATGAACCAGAAGAGTTTCGACCGGAGAGATTCAAGAATTCTTCAGTGGATTTCAAAGGGCAAGACTTTCAATTACTCCCATTTGTAGCTGGTAGAAGGGGCTGCCCAGGAATCTCATTTTCCATGACTACTAATGAGCTTGTGTTAGCAAATATTTTGCACAAGTTTGACTGGGAACTGCCTGCTGGAACAAGTGCAGAGGCTATAAACATGACCGAATGCAGCGGTGTTGTTGCGCATAGGAAAATTCCTCTTGTGGCTGTCGCAAAACCGAGTTTTTTCTAG

Protein Analysis

253

Amino Acids

27.84

Weight (kDa)

5.02

Isoelectric Point (pI)

33.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 19 - 238 3.9e-65 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000061)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G48270 AT3G48280 AT3G48290 AT3G48290 AT3G48300 AT3G48300 AT3G48310 AT3G48320 AT4G20235 AT4G20235
fragaria_vesca FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g36190 FvH4_3g14160 FvH4_3g14210 FvH4_3g14260 FvH4_3g14260 FvH4_3g21100 FvH4_3g21380 FvH4_4g24460 FvH4_4g24500 FvH4_5g06571 FvH4_5g06571 FvH4_5g06571 FvH4_5g06571 FvH4_5g06572 FvH4_5g06573 FvH4_5g06574 FvH4_5g06575 FvH4_5g06576 FvH4_5g06577 FvH4_5g06577 FvH4_5g07540 FvH4_5g07550 FvH4_5g07560 FvH4_5g07570 FvH4_5g29491 FvH4_5g29492 FvH4_6g23870 FvH4_6g23880 FvH4_6g26870 FvH4_7g11861 FvH4_7g11862 FvH4_7g13050 FvH4_7g13060 FvH4_7g13080 FvH4_7g13080 FvH4_7g22630 FvH4_7g22650 FvH4_7g22651 FvH4_7g23020
malus_domestica MD03G1207400.v1.1 MD03G1214800.v1.1 MD03G1218500.v1.1 MD06G1163100.v1.1 MD06G1163300.v1.1 MD06G1163400.v1.1 MD06G1163500.v1.1 MD06G1163600.v1.1 MD06G1163800.v1.1 MD06G1164000.v1.1 MD06G1164100.v1.1 MD06G1224400.v1.1 MD08G1222800.v1.1 MD08G1222900.v1.1 MD08G1223100.v1.1 MD11G1091500.v1.1 MD11G1091800.v1.1 MD14G1163200.v1.1 MD14G1169000.v1.1 MD15G1207200.v1.1 MD15G1207300.v1.1 MD17G1259400.v1.1
prunus_persica Prupe.4G198100_v2.0.a1 Prupe.4G199100_v2.0.a1 Prupe.4G199400_v2.0.a1 Prupe.4G199800_v2.0.a1 Prupe.4G225200_v2.0.a1 Prupe.4G239100_v2.0.a1 Prupe.5G156600_v2.0.a1 Prupe.5G163500_v2.0.a1 Prupe.7G209500_v2.0.a1 Prupe.I003400_v2.0.a1
pyrus_communis pycom03g16340 pycom06g14600 pycom06g14610 pycom06g14620 pycom06g14630 pycom06g14640 pycom06g14670 pycom06g14690 pycom08g19390 pycom08g19400 pycom08g19410 pycom11g07600 pycom11g07610 pycom11g07620 pycom11g07660 pycom14g13580 pycom14g14080 pycom14g14100 pycom14g14110 pycom15g18380 pycom17g26080
rosa_chinensis RchiOBHm_Chr1g0339441 RchiOBHm_Chr1g0339451 RchiOBHm_Chr1g0352191 RchiOBHm_Chr1g0368221 RchiOBHm_Chr2g0129531 RchiOBHm_Chr2g0129541 RchiOBHm_Chr3g0477631 RchiOBHm_Chr3g0482551 RchiOBHm_Chr3g0482561 RchiOBHm_Chr3g0482571 RchiOBHm_Chr4g0411601 RchiOBHm_Chr4g0422181 RchiOBHm_Chr5g0036661 RchiOBHm_Chr5g0036731 RchiOBHm_Chr6g0274021 RchiOBHm_Chr7g0190921 RchiOBHm_Chr7g0190931 RchiOBHm_Chr7g0190941 RchiOBHm_Chr7g0190951 RchiOBHm_Chr7g0190961 RchiOBHm_Chr7g0190971 RchiOBHm_Chr7g0191001 RchiOBHm_Chr7g0191011 RchiOBHm_Chr7g0191021 RchiOBHm_Chr7g0192181 RchiOBHm_Chr7g0192191 RchiOBHm_Chr7g0192201 RchiOBHm_Chr7g0192221 RchiOBHm_Chr7g0192231 RchiOBHm_Chr7g0192281 RchiOBHm_Chr7g0197311
rosa_laevigata RLG00000003942 RLG00000004345 RLG00000004379 RLG00000004383 RLG00000004384 RLG00000004385 RLG00000004387 RLG00000004388 RLG00000004389 RLG00000004480 RLG00000004481 RLG00000004482 RLG00000004483 RLG00000004485 RLG00000008342 RLG00000008401 RLG00000013583 RLG00000017044 RLG00000027229 RLG00000028349 RLG00000028350 RLG00000028353 RLG00000028820 RLG00000033707 RLG00000033710
rosa_multiflora Rmu_co8020340.1_g000001 Rmu_co8096640.1_g000001 Rmu_co8214930.1_g000001 Rmu_co8223272.1_g000001 Rmu_co8282535.1_g000001 Rmu_co8343567.1_g000001 Rmu_co8404191.1_g000001 Rmu_co8455157.1_g000001 Rmu_sc0000062.1_g000028 Rmu_sc0000082.1_g000091 Rmu_sc0000509.1_g000017 Rmu_sc0000775.1_g000001 Rmu_sc0000999.1_g000034 Rmu_sc0001559.1_g000004 Rmu_sc0001559.1_g000009 Rmu_sc0002164.1_g000001 Rmu_sc0002164.1_g000005 Rmu_sc0002164.1_g000007 Rmu_sc0002164.1_g000008 Rmu_sc0002164.1_g000009 Rmu_sc0002164.1_g000019 Rmu_sc0002247.1_g000009 Rmu_sc0002373.1_g000002 Rmu_sc0002373.1_g000003 Rmu_sc0002944.1_g000059 Rmu_sc0003930.1_g000004 Rmu_sc0004958.1_g000001 Rmu_sc0005197.1_g000014 Rmu_sc0005898.1_g000008 Rmu_sc0005898.1_g000009 Rmu_sc0005898.1_g000015 Rmu_sc0006059.1_g000004 Rmu_sc0006059.1_g000010 Rmu_sc0006903.1_g000007 Rmu_sc0006903.1_g000008 Rmu_sc0006968.1_g000001 Rmu_sc0011009.1_g000009 Rmu_sc0022852.1_g000002 Rmu_sc0033854.1_g000001 Rmu_ssc0000421.1_g000057 Rmu_ssc0000421.1_g000067 Rmu_ssc0000421.1_g000069 Rmu_ssc0000421.1_g000072 Rmu_ssc0000421.1_g000081 Rmu_ssc0000421.1_g000086
rosa_roxburghii Rroxscaffold_158G00443680 Rroxscaffold_158G00443710 Rroxscaffold_158G00443720 Rroxscaffold_158G00443740 Rroxscaffold_1G00034950 Rroxscaffold_1G00044240 Rroxscaffold_1G00044270 Rroxscaffold_3G00241380 Rroxscaffold_3G00247000 Rroxscaffold_3G00263120 Rroxscaffold_3G00263150 Rroxscaffold_3G00263160 Rroxscaffold_3G00263170 Rroxscaffold_3G00263180 Rroxscaffold_3G00263190 Rroxscaffold_3G00263210 Rroxscaffold_3G00263230 Rroxscaffold_3G00263260 Rroxscaffold_3G00264110 Rroxscaffold_3G00264130 Rroxscaffold_3G00264160 Rroxscaffold_3G00264180 Rroxscaffold_3G00264200 Rroxscaffold_4G00288750 Rroxscaffold_4G00303110 Rroxscaffold_4G00303120 Rroxscaffold_4G00322280 Rroxscaffold_5G00356200 Rroxscaffold_6G00399150 Rroxscaffold_6G00399290 Rroxscaffold_7G00194770
rosa_rugosa Rorug01G0225300 Rorug01G0225400 Rorug01G0225800 Rorug01G0226000 Rorug01G0339400 Rorug01G0451500 Rorug03G0196900 Rorug03G0294900 Rorug04G0107500 Rorug04G0107600 Rorug04G0129700 Rorug04G0178000 Rorug05G0144900.1 Rorug05G0145000 Rorug05G0228000 Rorug05G0228600 Rorug06G0078300 Rorug06G0508000 Rorug06G0508100 Rorug06G0508100 Rorug06G0508400 Rorug06G0513400 Rorug07G0000100 Rorug07G0000200 Rorug07G0000300 Rorug07G0000500 Rorug07G0000800
rosa_samantha Rh1BG060400 Rh1BG210300 Rh1BG210700 Rh1BG210800 Rh1BG309800 Rh1CG223800 Rh1CG224200 Rh1CG325200 Rh1DG237000 Rh1DG237400 Rh1DG341600 Rh2DG365700 Rh3AG212500 Rh3AG248400 Rh3CG239800 Rh3DG239300 Rh4AG169300 Rh4BG166200 Rh4BG240500 Rh4BG240600 Rh4DG163600 Rh5AG249600 Rh5AG249900 Rh5AG250000 Rh5CG283100 Rh5CG283200 Rh5CG283400 Rh5DG259200 Rh5DG259800 Rh6BG197700 Rh6CG197800 Rh6DG189400 Rh7AG114900 Rh7AG115000 Rh7AG115200 Rh7AG115300 Rh7AG115400 Rh7AG115500 Rh7AG123900 Rh7AG124100 Rh7AG124300 Rh7BG117200 Rh7BG117400 Rh7BG118400 Rh7BG125400 Rh7BG125600 Rh7BG125700 Rh7BG125800 Rh7BG125900 Rh7BG126000 Rh7BG126400 Rh7BG126600 Rh7BG126700 Rh7BG166200 Rh7DG118600 Rh7DG118700 Rh7DG118900 Rh7DG119000 Rh7DG119100 Rh7DG127400 Rh7DG127600 Rh7DG127700 Rh7DG127900 Rh7DG128200
rosa_wichuraiana Rw1G013270 Rw1G020790 Rw2G027890 Rw2G028040 Rw3G019240 Rw4G014070 Rw4G020540 Rw5G021320 Rw5G022970 Rw6G016920 Rw7G010020 Rw7G010040 Rw7G010580 Rw7G010590 Rw7G010600 Rw7G010610 Rw7G010620 Rw7G010630 Rw7G010640 Rw7G010690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 711
AciI CCGC 2 cut(s) 350, 699
AcsI RAATTY 2 cut(s) 511, 720
AcuI CTGAAG 2 cut(s) 405, 501
AfaI GTAC 1 cut(s) 75
AgsI TTSAA 6 cut(s) 13, 83, 316, 508, 529, 545
AjnI CCWGG 1 cut(s) 580
AluBI AGCT 3 cut(s) 93, 563, 613
AluI AGCT 3 cut(s) 93, 563, 613
Alw26I GTCTC 2 cut(s) 326, 453
ApeKI GCWGC 2 cut(s) 576, 696
ApoI RAATTY 2 cut(s) 511, 720
Asp700I GAANNNNTTC 1 cut(s) 489
AspLEI GCGC 2 cut(s) 309, 712
AsuII TTCGAA 1 cut(s) 88
BanII GRGCYC 1 cut(s) 110
BauI CACGAG 1 cut(s) 372
BbvI GCAGC 2 cut(s) 563, 708
BccI CCATC 1 cut(s) 32
BciT130I CCWGG 1 cut(s) 582
BclI TGATCA 1 cut(s) 324
BcoDI GTCTC 2 cut(s) 326, 453
BfaI CTAG 1 cut(s) 757
BisI GCNGC 2 cut(s) 577, 697
BlsI GCNGC 2 cut(s) 578, 698
Bme1390I CCNGG 1 cut(s) 582
BmrFI CCNGG 1 cut(s) 582
BmrI ACTGGG 1 cut(s) 655
BmsI GCATC 1 cut(s) 226
BmuI ACTGGG 1 cut(s) 655
Bpu14I TTCGAA 1 cut(s) 88
BpuEI CTTGAG 1 cut(s) 232
BsaI GGTCTC 1 cut(s) 453
BsaJI CCNNGG 1 cut(s) 580
BsaWI WCCGGW 1 cut(s) 496
Bse1I ACTGG 1 cut(s) 650
Bse3DI GCAATG 2 cut(s) 106, 204
BseBI CCWGG 1 cut(s) 582
BseDI CCNNGG 1 cut(s) 580
BseGI GGATG 4 cut(s) 76, 217, 346, 481
BseMI GCAATG 2 cut(s) 106, 204
BseNI ACTGG 1 cut(s) 650
BseXI GCAGC 2 cut(s) 563, 708
BseYI CCCAGC 1 cut(s) 463
BsgI GTGCAG 1 cut(s) 690
Bsh1285I CGRYCG 1 cut(s) 497
BsiEI CGRYCG 1 cut(s) 497
BsiSI CCGG 1 cut(s) 497
BsmAI GTCTC 2 cut(s) 326, 453
BsmI GAATGC 1 cut(s) 698
Bso31I GGTCTC 1 cut(s) 453
Bsp119I TTCGAA 1 cut(s) 88
Bsp1286I GDGCHC 1 cut(s) 110
Bsp143I GATC 1 cut(s) 324
BspACI CCGC 2 cut(s) 350, 699
BspQI GCTCTTC 1 cut(s) 115
BspT104I TTCGAA 1 cut(s) 88
BspTNI GGTCTC 1 cut(s) 453
BsrDI GCAATG 2 cut(s) 106, 204
BsrI ACTGG 1 cut(s) 650
BssECI CCNNGG 1 cut(s) 580
BssMI GATC 1 cut(s) 324
BssSI CACGAG 1 cut(s) 372
Bst2BI CACGAG 1 cut(s) 372
Bst2UI CCWGG 1 cut(s) 582
Bst4CI ACNGT 1 cut(s) 184
Bst6I CTCTTC 3 cut(s) 115, 451, 480
BstBI TTCGAA 1 cut(s) 88
BstC8I GCNNGC 1 cut(s) 657
BstF5I GGATG 4 cut(s) 76, 217, 346, 481
BstHHI GCGC 2 cut(s) 309, 712
BstKTI GATC 1 cut(s) 327
BstMAI GTCTC 2 cut(s) 326, 453
BstMBI GATC 1 cut(s) 324
BstMCI CGRYCG 1 cut(s) 497
BstMWI GCNNNNNNNGC 2 cut(s) 105, 349
BstNI CCWGG 1 cut(s) 582
BstNSI RCATGY 1 cut(s) 307
BstSCI CCNGG 1 cut(s) 580
BstV1I GCAGC 2 cut(s) 563, 708
BstXI CCANNNNNNTGG 1 cut(s) 471
BtsCI GGATG 4 cut(s) 76, 217, 346, 481
BtsI GCAGTG 1 cut(s) 327
BtsIMutI CAGTG 2 cut(s) 327, 525
Cac8I GCNNGC 1 cut(s) 657
CfoI GCGC 2 cut(s) 309, 712
Csp6I GTAC 1 cut(s) 74
CviAII CATG 3 cut(s) 304, 598, 685
CviJI RGCY 8 cut(s) 93, 108, 343, 563, 576, 613, 677, 734
CviKI_1 RGCY 8 cut(s) 93, 108, 343, 563, 576, 613, 677, 734
CviQI GTAC 1 cut(s) 74
DpnI GATC 1 cut(s) 326
DpnII GATC 1 cut(s) 324
Eam1104I CTCTTC 3 cut(s) 115, 451, 480
EarI CTCTTC 3 cut(s) 115, 451, 480
EciI GGCGGA 1 cut(s) 339
Eco24I GRGCYC 1 cut(s) 110
Eco31I GGTCTC 1 cut(s) 453
Eco57I CTGAAG 2 cut(s) 405, 501
EcoRI GAATTC 1 cut(s) 511
EcoRII CCWGG 1 cut(s) 580
EcoT38I GRGCYC 1 cut(s) 110
FaeI CATG 3 cut(s) 307, 601, 688
FaiI YATR 9 cut(s) 152, 178, 305, 413, 428, 599, 680, 686, 714
FalI AAGNNNNNCTT 2 cut(s) 321, 353
FatI CATG 3 cut(s) 303, 597, 684
FbaI TGATCA 1 cut(s) 324
Fnu4HI GCNGC 2 cut(s) 577, 697
FokI GGATG 4 cut(s) 83, 204, 333, 488
FriOI GRGCYC 1 cut(s) 110
Fsp4HI GCNGC 2 cut(s) 577, 697
FspBI CTAG 1 cut(s) 757
FspI TGCGCA 1 cut(s) 711
GlaI GCGC 2 cut(s) 308, 711
GluI GCNGC 2 cut(s) 577, 697
GsaI CCCAGC 1 cut(s) 467
HapII CCGG 1 cut(s) 497
HhaI GCGC 2 cut(s) 309, 712
Hin1II CATG 3 cut(s) 307, 601, 688
Hin6I GCGC 2 cut(s) 307, 710
HinP1I GCGC 2 cut(s) 307, 710
HinfI GANTC 3 cut(s) 377, 504, 585
HpaII CCGG 1 cut(s) 497
Hpy188III TCNNGA 3 cut(s) 211, 374, 508
HpyAV CCTTC 2 cut(s) 52, 564
HpyCH4III ACNGT 1 cut(s) 184
HpyCH4V TGCA 4 cut(s) 241, 634, 671, 696
HpyF10VI GCNNNNNNNGC 2 cut(s) 105, 349
Hsp92II CATG 3 cut(s) 307, 601, 688
HspAI GCGC 2 cut(s) 307, 710
Ksp22I TGATCA 1 cut(s) 324
Kzo9I GATC 1 cut(s) 324
LguI GCTCTTC 1 cut(s) 115
Lsp1109I GCAGC 2 cut(s) 563, 708
LweI GCATC 1 cut(s) 226
MaeI CTAG 1 cut(s) 757
MalI GATC 1 cut(s) 326
MboI GATC 1 cut(s) 324
MboII GAAGA 4 cut(s) 102, 468, 497, 507
MfeI CAATTG 1 cut(s) 450
MhlI GDGCHC 1 cut(s) 110
MluCI AATT 6 cut(s) 243, 258, 450, 511, 545, 720
MmeI TCCRAC 1 cut(s) 234
MnlI CCTC 9 cut(s) 14, 43, 47, 97, 207, 241, 381, 667, 735
MroXI GAANNNNTTC 1 cut(s) 489
MseI TTAA 2 cut(s) 132, 393
MspA1I CMGCKG 1 cut(s) 699
MspI CCGG 1 cut(s) 497
MspR9I CCNGG 1 cut(s) 582
MunI CAATTG 1 cut(s) 450
Mva1269I GAATGC 1 cut(s) 698
MvaI CCWGG 1 cut(s) 582
MwoI GCNNNNNNNGC 2 cut(s) 105, 349
NdeII GATC 1 cut(s) 324
NlaIII CATG 3 cut(s) 307, 601, 688
NsbI TGCGCA 1 cut(s) 711
NspI RCATGY 1 cut(s) 307
NspV TTCGAA 1 cut(s) 88
PciSI GCTCTTC 1 cut(s) 115
PctI GAATGC 1 cut(s) 698
PdmI GAANNNNTTC 1 cut(s) 489
PfeI GAWTC 3 cut(s) 377, 504, 585
PkrI GCNGC 2 cut(s) 578, 698
Psp6I CCWGG 1 cut(s) 580
PspFI CCCAGC 1 cut(s) 463
PspGI CCWGG 1 cut(s) 580
RsaI GTAC 1 cut(s) 75
RsaNI GTAC 1 cut(s) 74
SapI GCTCTTC 1 cut(s) 115
SaqAI TTAA 2 cut(s) 132, 393
SatI GCNGC 2 cut(s) 577, 697
Sau3AI GATC 1 cut(s) 324
ScrFI CCNGG 1 cut(s) 582
SduI GDGCHC 1 cut(s) 110
SetI ASST 4 cut(s) 95, 139, 565, 615
SfaNI GCATC 1 cut(s) 226
SfuI TTCGAA 1 cut(s) 88
SmlI CTYRAG 1 cut(s) 211
SmoI CTYRAG 1 cut(s) 211
Sse9I AATT 6 cut(s) 243, 258, 450, 511, 545, 720
SsiI CCGC 2 cut(s) 350, 699
SspI AATATT 1 cut(s) 628
SspMI CTAG 1 cut(s) 757
StyD4I CCNGG 1 cut(s) 580
TaaI ACNGT 1 cut(s) 184
TaqI TCGA 3 cut(s) 88, 113, 493
TaqII GACCGA 2 cut(s) 218, 704
TasI AATT 6 cut(s) 243, 258, 450, 511, 545, 720
TatI WGTACW 1 cut(s) 73
TfiI GAWTC 3 cut(s) 377, 504, 585
Tru1I TTAA 2 cut(s) 132, 393
Tru9I TTAA 2 cut(s) 132, 393
TscAI CASTG 2 cut(s) 327, 525
TseI GCWGC 2 cut(s) 576, 696
TspDTI ATGAA 1 cut(s) 492
TspRI CASTG 2 cut(s) 327, 525
XapI RAATTY 2 cut(s) 511, 720
XceI RCATGY 1 cut(s) 307
XmnI GAANNNNTTC 1 cut(s) 489
XspI CTAG 1 cut(s) 757
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.