Rroxscaffold_3G00263120

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
Physical Location & Seq
Reverse (-)
57065131 .. 57066586
1456 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00263120.1

Sequence Viewer

Length: 1320 bp
ATGCTTCATTTCGGTTCCAGACCTGTGCTCATAGTTTCATCTGCAGATGCTGCTCGCGAAATCATGAAAACAAATTATCTCATCTTCTCTAACAAACCCAAATTAACAATTATTGATAGACTTCTGTACGAAGGCAAGGATGTGTCCACGGCTCCTTACGGTGAGTATTGGAGGCAAGTAAGAAGCATATGCGTGCTCCAGCTTTTAAGTAACAAAAAGGTTCAGTCTTTCCGAGGAGTTAGAGAAGAAGAAATAGCCTTGCTGATTGAGAATGTCAAACAGTCGTCTATGTTGTCACTGCCAGTCAATCTAAGCGAATTGTTTTCTATGCTTACTAAAGATGTGATTTGTAGGGTGGCTTTTGGGAGGAAGTATAGTGGTGGTGAAGGTGCAATGAAGTTCAAGAAGTTGCTTGGGGAATTTATGGAGGTGTTGGGTGGTTTTTGTGTTGGAGATTTTATTCCATGGCTTTCATGGGTTAGTCGCTTTAGTGGGTTAGATGCAAGAGTGGAGAAAGTTTTTAAAGAATTTGATGGATTTCTTGATACAGTACTTGAGGATCATATGGTTTATCTTAGCACTAAGGGAGATATCTGTGGTATAGAAGGTGAAAATAGAAAGGATTTTGTGGATGTCCTGCTTGAAGTTCAAAAGAATAACATCACTGGCTCTTCCATTGATCGAGATGGCATTAAAGCTGTCATCTTGGATATGTTTGCGGGTGGAACTGACACGACCTCCACAGTTCTAGAGTGGGCGATGACTGAACTCATAAGGCATCCCAGAGTGATGAAAAGACTGCAAAATGAGGTTATGGGAATTGCTAATGGAAAACAAGACATAACAGAAAGTGACTTGGACAAAATGCCATACTTGAAAGCTGTGATCAAAGAAACACTAAGGCTGTATCCTCCAATACCGTTGTTGAGCATTCGAGAATCAACCCAAGATGTTAAAGTAAAGGGCTATGACATAGCTGCAAGAACCATGGTCCTAGTCAATGCCTGGACAATTGGAAGAGACCCTTCTCTGTGGGATGAACCGGAGGAGTTTCAACCTGATAGATTTATGAATTCTTCGGTGGACTTCAAAGGGCAGGACTTCCAATTAATCCCATTTGGAGCTGGCAGAAGAGGTTGCCCGGGAATCTTATTTGCCATTACCACTAATGAGCTTGTGTTAGCAAATCTTGTGCACAAGTTTGAGTGGTCGTTGCCTAGTGGAGCTACAGCTGAGGATATGAACATGACTGAATGCAATGGTGTTGTCATCCACAAAGAAGTTCCTCTTATAGTTATGGCAGCGCCAAGGTCTTCTTAA
Functional Annotation

Protein Analysis

439

Amino Acids

49.32

Weight (kDa)

5.63

Isoelectric Point (pI)

33.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 2 - 426 6.4e-98 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000061)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G48270 AT3G48280 AT3G48290 AT3G48290 AT3G48300 AT3G48300 AT3G48310 AT3G48320 AT4G20235 AT4G20235
fragaria_vesca FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g36190 FvH4_3g14160 FvH4_3g14210 FvH4_3g14260 FvH4_3g14260 FvH4_3g21100 FvH4_3g21380 FvH4_4g24460 FvH4_4g24500 FvH4_5g06571 FvH4_5g06571 FvH4_5g06571 FvH4_5g06571 FvH4_5g06572 FvH4_5g06573 FvH4_5g06574 FvH4_5g06575 FvH4_5g06576 FvH4_5g06577 FvH4_5g06577 FvH4_5g07540 FvH4_5g07550 FvH4_5g07560 FvH4_5g07570 FvH4_5g29491 FvH4_5g29492 FvH4_6g23870 FvH4_6g23880 FvH4_6g26870 FvH4_7g11861 FvH4_7g11862 FvH4_7g13050 FvH4_7g13060 FvH4_7g13080 FvH4_7g13080 FvH4_7g22630 FvH4_7g22650 FvH4_7g22651 FvH4_7g23020
malus_domestica MD03G1207400.v1.1 MD03G1214800.v1.1 MD03G1218500.v1.1 MD06G1163100.v1.1 MD06G1163300.v1.1 MD06G1163400.v1.1 MD06G1163500.v1.1 MD06G1163600.v1.1 MD06G1163800.v1.1 MD06G1164000.v1.1 MD06G1164100.v1.1 MD06G1224400.v1.1 MD08G1222800.v1.1 MD08G1222900.v1.1 MD08G1223100.v1.1 MD11G1091500.v1.1 MD11G1091800.v1.1 MD14G1163200.v1.1 MD14G1169000.v1.1 MD15G1207200.v1.1 MD15G1207300.v1.1 MD17G1259400.v1.1
prunus_persica Prupe.4G198100_v2.0.a1 Prupe.4G199100_v2.0.a1 Prupe.4G199400_v2.0.a1 Prupe.4G199800_v2.0.a1 Prupe.4G225200_v2.0.a1 Prupe.4G239100_v2.0.a1 Prupe.5G156600_v2.0.a1 Prupe.5G163500_v2.0.a1 Prupe.7G209500_v2.0.a1 Prupe.I003400_v2.0.a1
pyrus_communis pycom03g16340 pycom06g14600 pycom06g14610 pycom06g14620 pycom06g14630 pycom06g14640 pycom06g14670 pycom06g14690 pycom08g19390 pycom08g19400 pycom08g19410 pycom11g07600 pycom11g07610 pycom11g07620 pycom11g07660 pycom14g13580 pycom14g14080 pycom14g14100 pycom14g14110 pycom15g18380 pycom17g26080
rosa_chinensis RchiOBHm_Chr1g0339441 RchiOBHm_Chr1g0339451 RchiOBHm_Chr1g0352191 RchiOBHm_Chr1g0368221 RchiOBHm_Chr2g0129531 RchiOBHm_Chr2g0129541 RchiOBHm_Chr3g0477631 RchiOBHm_Chr3g0482551 RchiOBHm_Chr3g0482561 RchiOBHm_Chr3g0482571 RchiOBHm_Chr4g0411601 RchiOBHm_Chr4g0422181 RchiOBHm_Chr5g0036661 RchiOBHm_Chr5g0036731 RchiOBHm_Chr6g0274021 RchiOBHm_Chr7g0190921 RchiOBHm_Chr7g0190931 RchiOBHm_Chr7g0190941 RchiOBHm_Chr7g0190951 RchiOBHm_Chr7g0190961 RchiOBHm_Chr7g0190971 RchiOBHm_Chr7g0191001 RchiOBHm_Chr7g0191011 RchiOBHm_Chr7g0191021 RchiOBHm_Chr7g0192181 RchiOBHm_Chr7g0192191 RchiOBHm_Chr7g0192201 RchiOBHm_Chr7g0192221 RchiOBHm_Chr7g0192231 RchiOBHm_Chr7g0192281 RchiOBHm_Chr7g0197311
rosa_laevigata RLG00000003942 RLG00000004345 RLG00000004379 RLG00000004383 RLG00000004384 RLG00000004385 RLG00000004387 RLG00000004388 RLG00000004389 RLG00000004480 RLG00000004481 RLG00000004482 RLG00000004483 RLG00000004485 RLG00000008342 RLG00000008401 RLG00000013583 RLG00000017044 RLG00000027229 RLG00000028349 RLG00000028350 RLG00000028353 RLG00000028820 RLG00000033707 RLG00000033710
rosa_multiflora Rmu_co8020340.1_g000001 Rmu_co8096640.1_g000001 Rmu_co8214930.1_g000001 Rmu_co8223272.1_g000001 Rmu_co8282535.1_g000001 Rmu_co8343567.1_g000001 Rmu_co8404191.1_g000001 Rmu_co8455157.1_g000001 Rmu_sc0000062.1_g000028 Rmu_sc0000082.1_g000091 Rmu_sc0000509.1_g000017 Rmu_sc0000775.1_g000001 Rmu_sc0000999.1_g000034 Rmu_sc0001559.1_g000004 Rmu_sc0001559.1_g000009 Rmu_sc0002164.1_g000001 Rmu_sc0002164.1_g000005 Rmu_sc0002164.1_g000007 Rmu_sc0002164.1_g000008 Rmu_sc0002164.1_g000009 Rmu_sc0002164.1_g000019 Rmu_sc0002247.1_g000009 Rmu_sc0002373.1_g000002 Rmu_sc0002373.1_g000003 Rmu_sc0002944.1_g000059 Rmu_sc0003930.1_g000004 Rmu_sc0004958.1_g000001 Rmu_sc0005197.1_g000014 Rmu_sc0005898.1_g000008 Rmu_sc0005898.1_g000009 Rmu_sc0005898.1_g000015 Rmu_sc0006059.1_g000004 Rmu_sc0006059.1_g000010 Rmu_sc0006903.1_g000007 Rmu_sc0006903.1_g000008 Rmu_sc0006968.1_g000001 Rmu_sc0011009.1_g000009 Rmu_sc0022852.1_g000002 Rmu_sc0033854.1_g000001 Rmu_ssc0000421.1_g000057 Rmu_ssc0000421.1_g000067 Rmu_ssc0000421.1_g000069 Rmu_ssc0000421.1_g000072 Rmu_ssc0000421.1_g000081 Rmu_ssc0000421.1_g000086
rosa_roxburghii Rroxscaffold_158G00443680 Rroxscaffold_158G00443710 Rroxscaffold_158G00443720 Rroxscaffold_158G00443740 Rroxscaffold_1G00034950 Rroxscaffold_1G00044240 Rroxscaffold_1G00044270 Rroxscaffold_3G00241380 Rroxscaffold_3G00247000 Rroxscaffold_3G00263120 Rroxscaffold_3G00263150 Rroxscaffold_3G00263160 Rroxscaffold_3G00263170 Rroxscaffold_3G00263180 Rroxscaffold_3G00263190 Rroxscaffold_3G00263210 Rroxscaffold_3G00263230 Rroxscaffold_3G00263260 Rroxscaffold_3G00264110 Rroxscaffold_3G00264130 Rroxscaffold_3G00264160 Rroxscaffold_3G00264180 Rroxscaffold_3G00264200 Rroxscaffold_4G00288750 Rroxscaffold_4G00303110 Rroxscaffold_4G00303120 Rroxscaffold_4G00322280 Rroxscaffold_5G00356200 Rroxscaffold_6G00399150 Rroxscaffold_6G00399290 Rroxscaffold_7G00194770
rosa_rugosa Rorug01G0225300 Rorug01G0225400 Rorug01G0225800 Rorug01G0226000 Rorug01G0339400 Rorug01G0451500 Rorug03G0196900 Rorug03G0294900 Rorug04G0107500 Rorug04G0107600 Rorug04G0129700 Rorug04G0178000 Rorug05G0144900.1 Rorug05G0145000 Rorug05G0228000 Rorug05G0228600 Rorug06G0078300 Rorug06G0508000 Rorug06G0508100 Rorug06G0508100 Rorug06G0508400 Rorug06G0513400 Rorug07G0000100 Rorug07G0000200 Rorug07G0000300 Rorug07G0000500 Rorug07G0000800
rosa_samantha Rh1BG060400 Rh1BG210300 Rh1BG210700 Rh1BG210800 Rh1BG309800 Rh1CG223800 Rh1CG224200 Rh1CG325200 Rh1DG237000 Rh1DG237400 Rh1DG341600 Rh2DG365700 Rh3AG212500 Rh3AG248400 Rh3CG239800 Rh3DG239300 Rh4AG169300 Rh4BG166200 Rh4BG240500 Rh4BG240600 Rh4DG163600 Rh5AG249600 Rh5AG249900 Rh5AG250000 Rh5CG283100 Rh5CG283200 Rh5CG283400 Rh5DG259200 Rh5DG259800 Rh6BG197700 Rh6CG197800 Rh6DG189400 Rh7AG114900 Rh7AG115000 Rh7AG115200 Rh7AG115300 Rh7AG115400 Rh7AG115500 Rh7AG123900 Rh7AG124100 Rh7AG124300 Rh7BG117200 Rh7BG117400 Rh7BG118400 Rh7BG125400 Rh7BG125600 Rh7BG125700 Rh7BG125800 Rh7BG125900 Rh7BG126000 Rh7BG126400 Rh7BG126600 Rh7BG126700 Rh7BG166200 Rh7DG118600 Rh7DG118700 Rh7DG118900 Rh7DG119000 Rh7DG119100 Rh7DG127400 Rh7DG127600 Rh7DG127700 Rh7DG127900 Rh7DG128200
rosa_wichuraiana Rw1G013270 Rw1G020790 Rw2G027890 Rw2G028040 Rw3G019240 Rw4G014070 Rw4G020540 Rw5G021320 Rw5G022970 Rw6G016920 Rw7G010020 Rw7G010040 Rw7G010580 Rw7G010590 Rw7G010600 Rw7G010610 Rw7G010620 Rw7G010630 Rw7G010640 Rw7G010690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 57
AciI CCGC 1 cut(s) 719
AclWI GGATC 1 cut(s) 567
AcsI RAATTY 3 cut(s) 419, 527, 1072
AfaI GTAC 2 cut(s) 128, 552
AgsI TTSAA 6 cut(s) 403, 644, 650, 877, 1055, 1090
AjnI CCWGG 1 cut(s) 1004
AluBI AGCT 8 cut(s) 202, 698, 881, 977, 1124, 1174, 1226, 1232
AluI AGCT 8 cut(s) 202, 698, 881, 977, 1124, 1174, 1226, 1232
Alw21I GWGCWC 3 cut(s) 30, 198, 1197
Alw26I GTCTC 1 cut(s) 1014
Alw44I GTGCAC 1 cut(s) 1193
AlwI GGATC 1 cut(s) 567
AlwNI CAGNNNCTG 1 cut(s) 50
Ama87I CYCGRG 1 cut(s) 1141
ApaLI GTGCAC 1 cut(s) 1193
ApeKI GCWGC 3 cut(s) 50, 977, 1301
ApoI RAATTY 3 cut(s) 419, 527, 1072
AseI ATTAAT 1 cut(s) 1109
AspLEI GCGC 1 cut(s) 1306
AspS9I GGNCC 1 cut(s) 991
AsuC2I CCSGG 2 cut(s) 1142, 1143
AsuHPI GGTGA 3 cut(s) 173, 395, 620
AvaI CYCGRG 1 cut(s) 1141
AvaII GGWCC 1 cut(s) 991
BaeGI GKGCMC 1 cut(s) 1197
BbsI GAAGAC 1 cut(s) 1305
Bbv12I GWGCWC 3 cut(s) 30, 198, 1197
BbvCI CCTCAGC 1 cut(s) 1233
BbvI GCAGC 3 cut(s) 37, 964, 1313
BccI CCATC 2 cut(s) 527, 680
BceAI ACGGC 1 cut(s) 165
BciT130I CCWGG 1 cut(s) 1006
BciVI GTATCC 1 cut(s) 918
BclI TGATCA 1 cut(s) 885
BcnI CCSGG 2 cut(s) 1142, 1143
BcoDI GTCTC 1 cut(s) 1014
BfaI CTAG 3 cut(s) 749, 995, 1218
BfmI CTRYAG 2 cut(s) 42, 1227
BfoI RGCGCY 1 cut(s) 1307
BfuI GTATCC 1 cut(s) 918
BisI GCNGC 3 cut(s) 51, 978, 1302
BlsI GCNGC 3 cut(s) 52, 979, 1303
BmcAI AGTACT 1 cut(s) 552
Bme1390I CCNGG 3 cut(s) 1006, 1142, 1143
Bme18I GGWCC 1 cut(s) 991
BmeT110I CYCGRG 1 cut(s) 1141
BmgT120I GGNCC 1 cut(s) 991
BmiI GGNNCC 2 cut(s) 16, 153
BmrFI CCNGG 3 cut(s) 1006, 1142, 1143
BmsI GCATC 3 cut(s) 37, 490, 787
BpiI GAAGAC 1 cut(s) 1305
BpmI CTGGAG 1 cut(s) 182
Bpu10I CCTNAGC 1 cut(s) 1233
BpuEI CTTGAG 1 cut(s) 575
BpuMI CCSGG 2 cut(s) 1142, 1143
BsaI GGTCTC 1 cut(s) 1014
BsaJI CCNNGG 6 cut(s) 147, 232, 464, 987, 1141, 1307
BsaWI WCCGGW 1 cut(s) 1042
BsaXI ACNNNNNCTCC 2 cut(s) 722, 752
Bse1I ACTGG 2 cut(s) 302, 670
Bse3DI GCAATG 2 cut(s) 399, 1264
BseBI CCWGG 1 cut(s) 1006
BseDI CCNNGG 6 cut(s) 147, 232, 464, 987, 1141, 1307
BseGI GGATG 5 cut(s) 145, 637, 778, 1042, 1269
BseMI GCAATG 2 cut(s) 399, 1264
BseMII CTCAG 1 cut(s) 1224
BseNI ACTGG 2 cut(s) 302, 670
BseRI GAGGAG 2 cut(s) 249, 1061
BseSI GKGCMC 1 cut(s) 1197
BseXI GCAGC 3 cut(s) 37, 964, 1313
Bsh1236I CGCG 1 cut(s) 57
BsiHKAI GWGCWC 3 cut(s) 30, 198, 1197
BsiHKCI CYCGRG 1 cut(s) 1141
BsiSI CCGG 2 cut(s) 1043, 1142
BsmAI GTCTC 1 cut(s) 1014
BsmI GAATGC 2 cut(s) 930, 1259
Bso31I GGTCTC 1 cut(s) 1014
BsoBI CYCGRG 1 cut(s) 1141
Bsp1286I GDGCHC 3 cut(s) 30, 198, 1197
Bsp143I GATC 3 cut(s) 559, 679, 885
Bsp19I CCATGG 2 cut(s) 464, 987
Bsp68I TCGCGA 1 cut(s) 57
BspACI CCGC 1 cut(s) 719
BspCNI CTCAG 1 cut(s) 1225
BspFNI CGCG 1 cut(s) 57
BspHI TCATGA 1 cut(s) 63
BspLI GGNNCC 2 cut(s) 16, 153
BspMAI CTGCAG 1 cut(s) 46
BspPI GGATC 1 cut(s) 567
BspQI GCTCTTC 1 cut(s) 676
BspTNI GGTCTC 1 cut(s) 1014
BsrDI GCAATG 2 cut(s) 399, 1264
BsrI ACTGG 2 cut(s) 302, 670
BssECI CCNNGG 6 cut(s) 147, 232, 464, 987, 1141, 1307
BssMI GATC 3 cut(s) 559, 679, 885
BssT1I CCWWGG 3 cut(s) 464, 987, 1307
Bst2UI CCWGG 1 cut(s) 1006
Bst4CI ACNGT 5 cut(s) 161, 282, 550, 745, 921
Bst6I CTCTTC 3 cut(s) 676, 1012, 1126
BstAPI GCANNNNNTGC 1 cut(s) 50
BstC8I GCNNGC 3 cut(s) 55, 194, 1126
BstDEI CTNAG 5 cut(s) 311, 575, 582, 899, 1233
BstDSI CCRYGG 3 cut(s) 147, 464, 987
BstF5I GGATG 5 cut(s) 145, 637, 778, 1042, 1269
BstFNI CGCG 1 cut(s) 57
BstH2I RGCGCY 1 cut(s) 1307
BstHHI GCGC 1 cut(s) 1306
BstKTI GATC 3 cut(s) 562, 682, 888
BstMAI GTCTC 1 cut(s) 1014
BstMBI GATC 3 cut(s) 559, 679, 885
BstMWI GCNNNNNNNGC 1 cut(s) 50
BstNI CCWGG 1 cut(s) 1006
BstSCI CCNGG 3 cut(s) 1004, 1140, 1141
BstSFI CTRYAG 2 cut(s) 42, 1227
BstSLI GKGCMC 1 cut(s) 1197
BstUI CGCG 1 cut(s) 57
BstV1I GCAGC 3 cut(s) 37, 964, 1313
BstV2I GAAGAC 1 cut(s) 1305
BsuI GTATCC 1 cut(s) 918
BtgI CCRYGG 3 cut(s) 147, 464, 987
BtgZI GCGATG 1 cut(s) 773
BtsCI GGATG 5 cut(s) 145, 637, 778, 1042, 1269
BtsI GCAGTG 1 cut(s) 296
BtsIMutI CAGTG 2 cut(s) 296, 663
BtuMI TCGCGA 1 cut(s) 57
Cac8I GCNNGC 3 cut(s) 55, 194, 1126
CaiI CAGNNNCTG 1 cut(s) 50
CciI TCATGA 1 cut(s) 63
CfoI GCGC 1 cut(s) 1306
Cfr13I GGNCC 1 cut(s) 991
Cfr9I CCCGGG 1 cut(s) 1141
Csp6I GTAC 2 cut(s) 127, 551
CviAII CATG 5 cut(s) 64, 465, 474, 988, 1246
CviQI GTAC 2 cut(s) 127, 551
DdeI CTNAG 5 cut(s) 311, 575, 582, 899, 1233
DpnI GATC 3 cut(s) 561, 681, 887
DpnII GATC 3 cut(s) 559, 679, 885
DraI TTTAAA 1 cut(s) 523
Eam1104I CTCTTC 3 cut(s) 676, 1012, 1126
EarI CTCTTC 3 cut(s) 676, 1012, 1126
Eco130I CCWWGG 3 cut(s) 464, 987, 1307
Eco31I GGTCTC 1 cut(s) 1014
Eco32I GATATC 1 cut(s) 592
Eco47I GGWCC 1 cut(s) 991
Eco88I CYCGRG 1 cut(s) 1141
EcoRI GAATTC 1 cut(s) 1072
EcoRII CCWGG 1 cut(s) 1004
EcoRV GATATC 1 cut(s) 592
EcoT14I CCWWGG 3 cut(s) 464, 987, 1307
ErhI CCWWGG 3 cut(s) 464, 987, 1307
FaeI CATG 5 cut(s) 67, 468, 477, 991, 1249
FalI AAGNNNNNCTT 5 cut(s) 1009, 1041, 1272, 1304, 1300
FatI CATG 5 cut(s) 63, 464, 473, 987, 1245
FauI CCCGC 1 cut(s) 712
FauNDI CATATG 2 cut(s) 188, 564
FbaI TGATCA 1 cut(s) 885
Fnu4HI GCNGC 3 cut(s) 51, 978, 1302
FokI GGATG 5 cut(s) 152, 644, 765, 1049, 1256
Fsp4HI GCNGC 3 cut(s) 51, 978, 1302
FspBI CTAG 3 cut(s) 749, 995, 1218
GlaI GCGC 1 cut(s) 1305
GluI GCNGC 3 cut(s) 51, 978, 1302
GsuI CTGGAG 1 cut(s) 182
HaeII RGCGCY 1 cut(s) 1307
HapII CCGG 2 cut(s) 1043, 1142
HhaI GCGC 1 cut(s) 1306
Hin1II CATG 5 cut(s) 67, 468, 477, 991, 1249
Hin6I GCGC 1 cut(s) 1304
HinP1I GCGC 1 cut(s) 1304
HinfI GANTC 2 cut(s) 938, 1146
HpaII CCGG 2 cut(s) 1043, 1142
HphI GGTGA 3 cut(s) 173, 395, 620
Hpy166II GTNNAC 3 cut(s) 147, 1084, 1195
Hpy188I TCNGA 1 cut(s) 233
Hpy188III TCNNGA 8 cut(s) 18, 56, 64, 403, 542, 683, 749, 935
Hpy8I GTNNAC 3 cut(s) 147, 1084, 1195
HpyAV CCTTC 4 cut(s) 125, 380, 599, 1035
HpyCH4III ACNGT 5 cut(s) 161, 282, 550, 745, 921
HpyCH4V TGCA 7 cut(s) 44, 392, 503, 802, 980, 1195, 1257
HpyF10VI GCNNNNNNNGC 1 cut(s) 50
HpyF3I CTNAG 5 cut(s) 311, 575, 582, 899, 1233
Hsp92II CATG 5 cut(s) 67, 468, 477, 991, 1249
HspAI GCGC 1 cut(s) 1304
Ksp22I TGATCA 1 cut(s) 885
Kzo9I GATC 3 cut(s) 559, 679, 885
LguI GCTCTTC 1 cut(s) 676
LmnI GCTCC 4 cut(s) 157, 201, 1121, 1223
Lsp1109I GCAGC 3 cut(s) 37, 964, 1313
LweI GCATC 3 cut(s) 37, 490, 787
MaeI CTAG 3 cut(s) 749, 995, 1218
MaeIII GTNAC 3 cut(s) 209, 294, 851
MalI GATC 3 cut(s) 561, 681, 887
MboI GATC 3 cut(s) 559, 679, 885
MboII GAAGA 8 cut(s) 76, 257, 260, 663, 1029, 1068, 1143, 1305
MfeI CAATTG 1 cut(s) 1011
MhlI GDGCHC 3 cut(s) 30, 198, 1197
MmeI TCCRAC 1 cut(s) 430
MseI TTAA 7 cut(s) 104, 206, 522, 693, 954, 1109, 1318
MslI CAYNNNNRTG 1 cut(s) 191
MspA1I CMGCKG 1 cut(s) 1232
MspI CCGG 2 cut(s) 1043, 1142
MspR9I CCNGG 3 cut(s) 1006, 1142, 1143
MunI CAATTG 1 cut(s) 1011
Mva1269I GAATGC 2 cut(s) 930, 1259
MvaI CCWGG 1 cut(s) 1006
MvnI CGCG 1 cut(s) 57
MwoI GCNNNNNNNGC 1 cut(s) 50
NciI CCSGG 2 cut(s) 1142, 1143
NcoI CCATGG 2 cut(s) 464, 987
NdeI CATATG 2 cut(s) 188, 564
NdeII GATC 3 cut(s) 559, 679, 885
NlaIII CATG 5 cut(s) 67, 468, 477, 991, 1249
NlaIV GGNNCC 2 cut(s) 16, 153
NmuCI GTSAC 2 cut(s) 294, 851
NruI TCGCGA 1 cut(s) 57
PagI TCATGA 1 cut(s) 63
PciSI GCTCTTC 1 cut(s) 676
PctI GAATGC 2 cut(s) 930, 1259
PfeI GAWTC 2 cut(s) 938, 1146
PkrI GCNGC 3 cut(s) 52, 979, 1303
PshBI ATTAAT 1 cut(s) 1109
Psp6I CCWGG 1 cut(s) 1004
PspGI CCWGG 1 cut(s) 1004
PspN4I GGNNCC 2 cut(s) 16, 153
PspPI GGNCC 1 cut(s) 991
PstI CTGCAG 1 cut(s) 46
PstNI CAGNNNCTG 1 cut(s) 50
PvuII CAGCTG 1 cut(s) 1232
RruI TCGCGA 1 cut(s) 57
RsaI GTAC 2 cut(s) 128, 552
RsaNI GTAC 2 cut(s) 127, 551
RseI CAYNNNNRTG 1 cut(s) 191
SapI GCTCTTC 1 cut(s) 676
SaqAI TTAA 7 cut(s) 104, 206, 522, 693, 954, 1109, 1318
SatI GCNGC 3 cut(s) 51, 978, 1302
Sau3AI GATC 3 cut(s) 559, 679, 885
Sau96I GGNCC 1 cut(s) 991
ScaI AGTACT 1 cut(s) 552
ScrFI CCNGG 3 cut(s) 1006, 1142, 1143
SduI GDGCHC 3 cut(s) 30, 198, 1197
SfaNI GCATC 3 cut(s) 37, 490, 787
SfcI CTRYAG 2 cut(s) 42, 1227
SinI GGWCC 1 cut(s) 991
SmaI CCCGGG 1 cut(s) 1143
SmiMI CAYNNNNRTG 1 cut(s) 191
SmlI CTYRAG 1 cut(s) 554
SmoI CTYRAG 1 cut(s) 554
SsiI CCGC 1 cut(s) 719
SspMI CTAG 3 cut(s) 749, 995, 1218
StyD4I CCNGG 3 cut(s) 1004, 1140, 1141
StyI CCWWGG 3 cut(s) 464, 987, 1307
TaaI ACNGT 5 cut(s) 161, 282, 550, 745, 921
TaqI TCGA 2 cut(s) 682, 934
TatI WGTACW 1 cut(s) 550
TfiI GAWTC 2 cut(s) 938, 1146
Tru1I TTAA 7 cut(s) 104, 206, 522, 693, 954, 1109, 1318
Tru9I TTAA 7 cut(s) 104, 206, 522, 693, 954, 1109, 1318
TscAI CASTG 2 cut(s) 303, 670
TseFI GTSAC 2 cut(s) 294, 851
TseI GCWGC 3 cut(s) 50, 977, 1301
Tsp45I GTSAC 2 cut(s) 294, 851
TspDTI ATGAA 8 cut(s) 27, 80, 410, 462, 806, 1053, 1085, 1256
TspMI CCCGGG 1 cut(s) 1141
TspRI CASTG 2 cut(s) 303, 670
VneI GTGCAC 1 cut(s) 1193
VpaK11BI GGWCC 1 cut(s) 991
VspI ATTAAT 1 cut(s) 1109
XapI RAATTY 3 cut(s) 419, 527, 1072
XbaI TCTAGA 1 cut(s) 748
XcmI CCANNNNNNNNNTGG 1 cut(s) 471
XmaI CCCGGG 1 cut(s) 1141
XspI CTAG 3 cut(s) 749, 995, 1218
ZrmI AGTACT 1 cut(s) 552
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.