Rw3G019240

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr3
Physical Location & Seq
Reverse (-)
21787782 .. 21789647
1866 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw3G019240.1

Sequence Viewer

Length: 1539 bp
ATGGGATGGGAACCGATTAGTCTATTACAGTTGACCAAATGGTCCTTATTCTCAGTTACTACAAAAAACTCTCCACCTTCTCCACCAAAGCTCCTTGTGCTCAGACAACTTTTGAAAATAGGCTCAAACCCTCATCGCTCCCTACAAAACCTAGCTCAACGCTATGGCTCTGATCTCATGGTCCTCTATTTGGGAACTGCCCCACTGGTTCTTGTCTCGTCGGCTGAGGCTGCCCGCGAGATTATGAAAACCAATGATCTCGAATTCTCCAATAGACCCAAGTCTGTCATCTTCCAGAAGCTTCTCTGCAATTACAAAGACGTCGCCATGGCACCTTACGGTGAGTACTGGAAGCAGGTGAAGAGTATATGTGTTGTTAATCTCTTGAGCAACAAAAGGGTTCGCTCTTTTCGTGCTGTGAGAGAAGAGGAAACAAAACTCATGATCAACAAGATTAATGAATCATCGGGAGAAGTCATGAACTTAAGAGAAATGTTTGTGATGCTTACCAGTGATATTATTTGTAGAGTGACAATGGGGAGGAAGTACAGTGCTAGTGCTGTAGGGGAAGGTGGTAATACAATTTTGTTTGAGGAGCTATTGTGGGAGTTCACAGAGTTATTGAGGAGTTTCTATATTGGAGACTATATTCCATGGCTTGCTTGGTTGAGCCGTGTTAATGGTTTGGAAGCTAAATTAGACAAGGTGGCTAAGCAGTTCGATGACTTCTTGGATAGAGTGATTCAAGATCGTGTAGATCATCGTTCAAAGGCCAGTGGAAGTAGTGGCCATGTGAATCATGCTGATCCAAATGGGGAGGACGAAAAGGATTTTGTGGATGTTTTGCTCGAGATTCAAGAAGGAAACTTGTCTGGTTTACCTATTGATAGAGTTAGTATAAAGGCTGTCATATTGGATATGCTTGGTGGAGGCGCTGATAGCACATATTCTGTCATAGAGTGGACGATGGCAGAGCTTTTAAGGCATCCAAGGGTAATGAAAAAATTGCAAAGTGAGGTCCGGGAGTCGGCGGGAGACAAAACACACATAACAGAGGATGATTTGCTTGAAATGAACTACTTGAATGCCGTGATCAAGGAGACCCTTCTCTTACACCCTCCATTTACTGTACTATCTCGGATGTCCGGCCAAGATGTGGAAGTAAAGGGTTACAAAATTAAAGCCAACACACGCATTGTAGTGAATATGTGGCAAATTGGAAGAGATCCCAAGTCATACAACAAACCAGAGGAGTACGAGCCAGAAAGGTTCTTGAATGAGAATAGTGGAGTAAGTTATAAAGGAAACGACTTCCGGTTGATTCCATTTGGAGCTGGCAGGAGGGTCTGTCCCGGAATTCAGTTTGCCATGGCTGTTAATAAGACTGCTTTAGCGAATTTGGTGCACAAGTTTGATTGGGCATTGCCTGGCGGAGCAAGCGGGGATGATTTAGACATGACTGAATCCACTGGCATGCCAACACATCGAAAGCATCCTTTGAAAGCCGTGGCTATTCCATACCTAGCTAACTACGGATAG

Protein Analysis

512

Amino Acids

57.69

Weight (kDa)

7.16

Isoelectric Point (pI)

37.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 25 - 493 6e-91 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000061)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G48270 AT3G48280 AT3G48290 AT3G48290 AT3G48300 AT3G48300 AT3G48310 AT3G48320 AT4G20235 AT4G20235
fragaria_vesca FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g36190 FvH4_3g14160 FvH4_3g14210 FvH4_3g14260 FvH4_3g14260 FvH4_3g21100 FvH4_3g21380 FvH4_4g24460 FvH4_4g24500 FvH4_5g06571 FvH4_5g06571 FvH4_5g06571 FvH4_5g06571 FvH4_5g06572 FvH4_5g06573 FvH4_5g06574 FvH4_5g06575 FvH4_5g06576 FvH4_5g06577 FvH4_5g06577 FvH4_5g07540 FvH4_5g07550 FvH4_5g07560 FvH4_5g07570 FvH4_5g29491 FvH4_5g29492 FvH4_6g23870 FvH4_6g23880 FvH4_6g26870 FvH4_7g11861 FvH4_7g11862 FvH4_7g13050 FvH4_7g13060 FvH4_7g13080 FvH4_7g13080 FvH4_7g22630 FvH4_7g22650 FvH4_7g22651 FvH4_7g23020
malus_domestica MD03G1207400.v1.1 MD03G1214800.v1.1 MD03G1218500.v1.1 MD06G1163100.v1.1 MD06G1163300.v1.1 MD06G1163400.v1.1 MD06G1163500.v1.1 MD06G1163600.v1.1 MD06G1163800.v1.1 MD06G1164000.v1.1 MD06G1164100.v1.1 MD06G1224400.v1.1 MD08G1222800.v1.1 MD08G1222900.v1.1 MD08G1223100.v1.1 MD11G1091500.v1.1 MD11G1091800.v1.1 MD14G1163200.v1.1 MD14G1169000.v1.1 MD15G1207200.v1.1 MD15G1207300.v1.1 MD17G1259400.v1.1
prunus_persica Prupe.4G198100_v2.0.a1 Prupe.4G199100_v2.0.a1 Prupe.4G199400_v2.0.a1 Prupe.4G199800_v2.0.a1 Prupe.4G225200_v2.0.a1 Prupe.4G239100_v2.0.a1 Prupe.5G156600_v2.0.a1 Prupe.5G163500_v2.0.a1 Prupe.7G209500_v2.0.a1 Prupe.I003400_v2.0.a1
pyrus_communis pycom03g16340 pycom06g14600 pycom06g14610 pycom06g14620 pycom06g14630 pycom06g14640 pycom06g14670 pycom06g14690 pycom08g19390 pycom08g19400 pycom08g19410 pycom11g07600 pycom11g07610 pycom11g07620 pycom11g07660 pycom14g13580 pycom14g14080 pycom14g14100 pycom14g14110 pycom15g18380 pycom17g26080
rosa_chinensis RchiOBHm_Chr1g0339441 RchiOBHm_Chr1g0339451 RchiOBHm_Chr1g0352191 RchiOBHm_Chr1g0368221 RchiOBHm_Chr2g0129531 RchiOBHm_Chr2g0129541 RchiOBHm_Chr3g0477631 RchiOBHm_Chr3g0482551 RchiOBHm_Chr3g0482561 RchiOBHm_Chr3g0482571 RchiOBHm_Chr4g0411601 RchiOBHm_Chr4g0422181 RchiOBHm_Chr5g0036661 RchiOBHm_Chr5g0036731 RchiOBHm_Chr6g0274021 RchiOBHm_Chr7g0190921 RchiOBHm_Chr7g0190931 RchiOBHm_Chr7g0190941 RchiOBHm_Chr7g0190951 RchiOBHm_Chr7g0190961 RchiOBHm_Chr7g0190971 RchiOBHm_Chr7g0191001 RchiOBHm_Chr7g0191011 RchiOBHm_Chr7g0191021 RchiOBHm_Chr7g0192181 RchiOBHm_Chr7g0192191 RchiOBHm_Chr7g0192201 RchiOBHm_Chr7g0192221 RchiOBHm_Chr7g0192231 RchiOBHm_Chr7g0192281 RchiOBHm_Chr7g0197311
rosa_laevigata RLG00000003942 RLG00000004345 RLG00000004379 RLG00000004383 RLG00000004384 RLG00000004385 RLG00000004387 RLG00000004388 RLG00000004389 RLG00000004480 RLG00000004481 RLG00000004482 RLG00000004483 RLG00000004485 RLG00000008342 RLG00000008401 RLG00000013583 RLG00000017044 RLG00000027229 RLG00000028349 RLG00000028350 RLG00000028353 RLG00000028820 RLG00000033707 RLG00000033710
rosa_multiflora Rmu_co8020340.1_g000001 Rmu_co8096640.1_g000001 Rmu_co8214930.1_g000001 Rmu_co8223272.1_g000001 Rmu_co8282535.1_g000001 Rmu_co8343567.1_g000001 Rmu_co8404191.1_g000001 Rmu_co8455157.1_g000001 Rmu_sc0000062.1_g000028 Rmu_sc0000082.1_g000091 Rmu_sc0000509.1_g000017 Rmu_sc0000775.1_g000001 Rmu_sc0000999.1_g000034 Rmu_sc0001559.1_g000004 Rmu_sc0001559.1_g000009 Rmu_sc0002164.1_g000001 Rmu_sc0002164.1_g000005 Rmu_sc0002164.1_g000007 Rmu_sc0002164.1_g000008 Rmu_sc0002164.1_g000009 Rmu_sc0002164.1_g000019 Rmu_sc0002247.1_g000009 Rmu_sc0002373.1_g000002 Rmu_sc0002373.1_g000003 Rmu_sc0002944.1_g000059 Rmu_sc0003930.1_g000004 Rmu_sc0004958.1_g000001 Rmu_sc0005197.1_g000014 Rmu_sc0005898.1_g000008 Rmu_sc0005898.1_g000009 Rmu_sc0005898.1_g000015 Rmu_sc0006059.1_g000004 Rmu_sc0006059.1_g000010 Rmu_sc0006903.1_g000007 Rmu_sc0006903.1_g000008 Rmu_sc0006968.1_g000001 Rmu_sc0011009.1_g000009 Rmu_sc0022852.1_g000002 Rmu_sc0033854.1_g000001 Rmu_ssc0000421.1_g000057 Rmu_ssc0000421.1_g000067 Rmu_ssc0000421.1_g000069 Rmu_ssc0000421.1_g000072 Rmu_ssc0000421.1_g000081 Rmu_ssc0000421.1_g000086
rosa_roxburghii Rroxscaffold_158G00443680 Rroxscaffold_158G00443710 Rroxscaffold_158G00443720 Rroxscaffold_158G00443740 Rroxscaffold_1G00034950 Rroxscaffold_1G00044240 Rroxscaffold_1G00044270 Rroxscaffold_3G00241380 Rroxscaffold_3G00247000 Rroxscaffold_3G00263120 Rroxscaffold_3G00263150 Rroxscaffold_3G00263160 Rroxscaffold_3G00263170 Rroxscaffold_3G00263180 Rroxscaffold_3G00263190 Rroxscaffold_3G00263210 Rroxscaffold_3G00263230 Rroxscaffold_3G00263260 Rroxscaffold_3G00264110 Rroxscaffold_3G00264130 Rroxscaffold_3G00264160 Rroxscaffold_3G00264180 Rroxscaffold_3G00264200 Rroxscaffold_4G00288750 Rroxscaffold_4G00303110 Rroxscaffold_4G00303120 Rroxscaffold_4G00322280 Rroxscaffold_5G00356200 Rroxscaffold_6G00399150 Rroxscaffold_6G00399290 Rroxscaffold_7G00194770
rosa_rugosa Rorug01G0225300 Rorug01G0225400 Rorug01G0225800 Rorug01G0226000 Rorug01G0339400 Rorug01G0451500 Rorug03G0196900 Rorug03G0294900 Rorug04G0107500 Rorug04G0107600 Rorug04G0129700 Rorug04G0178000 Rorug05G0144900.1 Rorug05G0145000 Rorug05G0228000 Rorug05G0228600 Rorug06G0078300 Rorug06G0508000 Rorug06G0508100 Rorug06G0508100 Rorug06G0508400 Rorug06G0513400 Rorug07G0000100 Rorug07G0000200 Rorug07G0000300 Rorug07G0000500 Rorug07G0000800
rosa_samantha Rh1BG060400 Rh1BG210300 Rh1BG210700 Rh1BG210800 Rh1BG309800 Rh1CG223800 Rh1CG224200 Rh1CG325200 Rh1DG237000 Rh1DG237400 Rh1DG341600 Rh2DG365700 Rh3AG212500 Rh3AG248400 Rh3CG239800 Rh3DG239300 Rh4AG169300 Rh4BG166200 Rh4BG240500 Rh4BG240600 Rh4DG163600 Rh5AG249600 Rh5AG249900 Rh5AG250000 Rh5CG283100 Rh5CG283200 Rh5CG283400 Rh5DG259200 Rh5DG259800 Rh6BG197700 Rh6CG197800 Rh6DG189400 Rh7AG114900 Rh7AG115000 Rh7AG115200 Rh7AG115300 Rh7AG115400 Rh7AG115500 Rh7AG123900 Rh7AG124100 Rh7AG124300 Rh7BG117200 Rh7BG117400 Rh7BG118400 Rh7BG125400 Rh7BG125600 Rh7BG125700 Rh7BG125800 Rh7BG125900 Rh7BG126000 Rh7BG126400 Rh7BG126600 Rh7BG126700 Rh7BG166200 Rh7DG118600 Rh7DG118700 Rh7DG118900 Rh7DG119000 Rh7DG119100 Rh7DG127400 Rh7DG127600 Rh7DG127700 Rh7DG127900 Rh7DG128200
rosa_wichuraiana Rw1G013270 Rw1G020790 Rw2G027890 Rw2G028040 Rw3G019240 Rw4G014070 Rw4G020540 Rw5G021320 Rw5G022970 Rw6G016920 Rw7G010020 Rw7G010040 Rw7G010580 Rw7G010590 Rw7G010600 Rw7G010610 Rw7G010620 Rw7G010630 Rw7G010640 Rw7G010690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1299
AarI CACCTGC 1 cut(s) 346
AasI GACNNNNNNGTC 1 cut(s) 40
AatII GACGTC 1 cut(s) 324
Acc36I ACCTGC 1 cut(s) 346
AccB1I GGYRCC 1 cut(s) 331
AccB7I CCANNNNNTGG 1 cut(s) 1156
AccII CGCG 1 cut(s) 237
AciI CCGC 4 cut(s) 235, 1031, 1431, 1440
AclWI GGATC 2 cut(s) 800, 1220
AcoI YGGCCR 2 cut(s) 787, 1147
AcsI RAATTY 3 cut(s) 263, 1356, 1396
AcyI GRCGYC 1 cut(s) 321
AfaI GTAC 4 cut(s) 347, 548, 1131, 1256
AfiI CCNNNNNNNGG 3 cut(s) 190, 1027, 1156
AflII CTTAAG 1 cut(s) 484
AgsI TTSAA 8 cut(s) 115, 746, 768, 857, 1070, 1084, 1276, 1501
AjnI CCWGG 1 cut(s) 1426
AluBI AGCT 8 cut(s) 91, 155, 301, 598, 692, 976, 1334, 1526
AluI AGCT 8 cut(s) 91, 155, 301, 598, 692, 976, 1334, 1526
Alw21I GWGCWC 2 cut(s) 102, 1407
Alw26I GTCTC 4 cut(s) 220, 636, 1029, 1094
Alw44I GTGCAC 1 cut(s) 1403
AlwI GGATC 2 cut(s) 800, 1220
Ama87I CYCGRG 1 cut(s) 848
AoxI GGCC 3 cut(s) 771, 787, 1147
ApaLI GTGCAC 1 cut(s) 1403
ApeKI GCWGC 1 cut(s) 230
ApoI RAATTY 3 cut(s) 263, 1356, 1396
AseI ATTAAT 1 cut(s) 456
AspLEI GCGC 1 cut(s) 935
AspS9I GGNCC 3 cut(s) 42, 181, 1018
AsuC2I CCSGG 2 cut(s) 1022, 1353
AsuHPI GGTGA 2 cut(s) 353, 370
AvaI CYCGRG 1 cut(s) 848
AvaII GGWCC 3 cut(s) 42, 181, 1018
BaeGI GKGCMC 1 cut(s) 1407
BalI TGGCCA 1 cut(s) 789
BanI GGYRCC 1 cut(s) 331
Bbv12I GWGCWC 2 cut(s) 102, 1407
BbvCI CCTCAGC 1 cut(s) 225
BbvI GCAGC 1 cut(s) 217
BccI CCATC 1 cut(s) 961
BceAI ACGGC 3 cut(s) 657, 1073, 1490
BcgI CGANNNNNNTGC 2 cut(s) 1384, 1418
BciT130I CCWGG 1 cut(s) 1428
BclI TGATCA 2 cut(s) 444, 1092
BcnI CCSGG 2 cut(s) 1022, 1353
BcoDI GTCTC 4 cut(s) 220, 636, 1029, 1094
BfaI CTAG 3 cut(s) 152, 555, 1523
BfmI CTRYAG 1 cut(s) 561
BfoI RGCGCY 1 cut(s) 936
BfrI CTTAAG 1 cut(s) 484
BfuAI ACCTGC 1 cut(s) 346
BisI GCNGC 1 cut(s) 231
BlpI GCTNAGC 1 cut(s) 711
BlsI GCNGC 1 cut(s) 232
BmcAI AGTACT 1 cut(s) 347
Bme1390I CCNGG 3 cut(s) 1022, 1353, 1428
Bme18I GGWCC 3 cut(s) 42, 181, 1018
BmeT110I CYCGRG 1 cut(s) 848
BmgT120I GGNCC 3 cut(s) 42, 181, 1018
BmiI GGNNCC 2 cut(s) 12, 333
BmrFI CCNGG 3 cut(s) 1022, 1353, 1428
BmsI GCATC 3 cut(s) 492, 994, 1501
BoxI GACNNNNGTC 1 cut(s) 280
Bpu10I CCTNAGC 1 cut(s) 225
Bpu1102I GCTNAGC 1 cut(s) 711
BpuEI CTTGAG 1 cut(s) 406
BpuMI CCSGG 2 cut(s) 1022, 1353
BsaHI GRCGYC 1 cut(s) 321
BsaI GGTCTC 1 cut(s) 1094
BsaJI CCNNGG 5 cut(s) 327, 653, 989, 1368, 1506
BsaWI WCCGGW 1 cut(s) 1314
BsaXI ACNNNNNCTCC 6 cut(s) 75, 105, 587, 617, 1333, 1363
Bsc4I CCNNNNNNNGG 3 cut(s) 190, 1027, 1156
Bse1I ACTGG 5 cut(s) 210, 353, 510, 774, 1474
Bse3DI GCAATG 1 cut(s) 1421
BseBI CCWGG 1 cut(s) 1428
BseDI CCNNGG 5 cut(s) 327, 653, 989, 1368, 1506
BseGI GGATG 7 cut(s) 11, 844, 985, 1063, 1146, 1450, 1492
BseLI CCNNNNNNNGG 3 cut(s) 190, 1027, 1156
BseMI GCAATG 1 cut(s) 1421
BseMII CTCAG 3 cut(s) 66, 115, 216
BseNI ACTGG 5 cut(s) 210, 353, 510, 774, 1474
BseRI GAGGAG 3 cut(s) 608, 640, 1265
BseSI GKGCMC 1 cut(s) 1407
BseXI GCAGC 1 cut(s) 217
Bsh1236I CGCG 1 cut(s) 237
BshFI GGCC 3 cut(s) 773, 789, 1149
BshNI GGYRCC 1 cut(s) 331
BsiHKAI GWGCWC 2 cut(s) 102, 1407
BsiHKCI CYCGRG 1 cut(s) 848
BsiSI CCGG 4 cut(s) 1021, 1146, 1315, 1353
BslFI GGGAC 1 cut(s) 1335
BslI CCNNNNNNNGG 3 cut(s) 190, 1027, 1156
BsmAI GTCTC 4 cut(s) 220, 636, 1029, 1094
BsmFI GGGAC 1 cut(s) 1335
BsmI GAATGC 1 cut(s) 1090
BsnI GGCC 3 cut(s) 773, 789, 1149
Bso31I GGTCTC 1 cut(s) 1094
BsoBI CYCGRG 1 cut(s) 848
Bsp1286I GDGCHC 2 cut(s) 102, 1407
Bsp143I GATC 8 cut(s) 172, 256, 444, 748, 757, 805, 1092, 1225
Bsp1720I GCTNAGC 1 cut(s) 711
Bsp19I CCATGG 3 cut(s) 327, 653, 1368
BspACI CCGC 4 cut(s) 235, 1031, 1431, 1440
BspANI GGCC 3 cut(s) 773, 789, 1149
BspCNI CTCAG 3 cut(s) 65, 114, 217
BspFNI CGCG 1 cut(s) 237
BspHI TCATGA 2 cut(s) 441, 477
BspLI GGNNCC 2 cut(s) 12, 333
BspMI ACCTGC 1 cut(s) 346
BspPI GGATC 2 cut(s) 800, 1220
BspT107I GGYRCC 1 cut(s) 331
BspTI CTTAAG 1 cut(s) 484
BspTNI GGTCTC 1 cut(s) 1094
BsrDI GCAATG 1 cut(s) 1421
BsrI ACTGG 5 cut(s) 210, 353, 510, 774, 1474
BssECI CCNNGG 5 cut(s) 327, 653, 989, 1368, 1506
BssMI GATC 8 cut(s) 172, 256, 444, 748, 757, 805, 1092, 1225
BssNI GRCGYC 1 cut(s) 321
BssT1I CCWWGG 4 cut(s) 327, 653, 989, 1368
Bst2UI CCWGG 1 cut(s) 1428
Bst4CI ACNGT 4 cut(s) 30, 341, 551, 1129
Bst6I CTCTTC 3 cut(s) 356, 420, 1216
BstACI GRCGYC 1 cut(s) 321
BstAFI CTTAAG 1 cut(s) 484
BstC8I GCNNGC 5 cut(s) 235, 660, 1336, 1438, 1475
BstDEI CTNAG 4 cut(s) 52, 101, 225, 711
BstDSI CCRYGG 4 cut(s) 327, 653, 1368, 1506
BstF5I GGATG 7 cut(s) 11, 844, 985, 1063, 1146, 1450, 1492
BstFNI CGCG 1 cut(s) 237
BstH2I RGCGCY 1 cut(s) 936
BstHHI GCGC 1 cut(s) 935
BstKTI GATC 8 cut(s) 175, 259, 447, 751, 760, 808, 1095, 1228
BstMAI GTCTC 4 cut(s) 220, 636, 1029, 1094
BstMBI GATC 8 cut(s) 172, 256, 444, 748, 757, 805, 1092, 1225
BstMWI GCNNNNNNNGC 5 cut(s) 97, 230, 939, 982, 1437
BstNI CCWGG 1 cut(s) 1428
BstNSI RCATGY 1 cut(s) 1477
BstPAI GACNNNNGTC 1 cut(s) 280
BstSCI CCNGG 3 cut(s) 1020, 1351, 1426
BstSFI CTRYAG 1 cut(s) 561
BstSLI GKGCMC 1 cut(s) 1407
BstUI CGCG 1 cut(s) 237
BstV1I GCAGC 1 cut(s) 217
BstX2I RGATCY 1 cut(s) 1225
BstYI RGATCY 1 cut(s) 1225
BsuRI GGCC 3 cut(s) 773, 789, 1149
BtgI CCRYGG 4 cut(s) 327, 653, 1368, 1506
BtgZI GCGATG 1 cut(s) 119
BtsCI GGATG 7 cut(s) 11, 844, 985, 1063, 1146, 1450, 1492
BtsIMutI CAGTG 5 cut(s) 203, 517, 556, 781, 1467
BveI ACCTGC 1 cut(s) 346
Cac8I GCNNGC 5 cut(s) 235, 660, 1336, 1438, 1475
CciI TCATGA 2 cut(s) 441, 477
CfoI GCGC 1 cut(s) 935
Cfr13I GGNCC 3 cut(s) 42, 181, 1018
Csp6I GTAC 4 cut(s) 346, 547, 1130, 1255
CviQI GTAC 4 cut(s) 346, 547, 1130, 1255
DdeI CTNAG 4 cut(s) 52, 101, 225, 711
DpnI GATC 8 cut(s) 174, 258, 446, 750, 759, 807, 1094, 1227
DpnII GATC 8 cut(s) 172, 256, 444, 748, 757, 805, 1092, 1225
DrdI GACNNNNNNGTC 1 cut(s) 40
DseDI GACNNNNNNGTC 1 cut(s) 40
EaeI YGGCCR 2 cut(s) 787, 1147
Eam1104I CTCTTC 3 cut(s) 356, 420, 1216
EarI CTCTTC 3 cut(s) 356, 420, 1216
EciI GGCGGA 1 cut(s) 1446
Eco130I CCWWGG 4 cut(s) 327, 653, 989, 1368
Eco31I GGTCTC 1 cut(s) 1094
Eco47I GGWCC 3 cut(s) 42, 181, 1018
Eco88I CYCGRG 1 cut(s) 848
EcoRI GAATTC 2 cut(s) 263, 1356
EcoRII CCWGG 1 cut(s) 1426
EcoT14I CCWWGG 4 cut(s) 327, 653, 989, 1368
ErhI CCWWGG 4 cut(s) 327, 653, 989, 1368
FaqI GGGAC 1 cut(s) 1335
FauI CCCGC 3 cut(s) 242, 1024, 1433
FbaI TGATCA 2 cut(s) 444, 1092
Fnu4HI GCNGC 1 cut(s) 231
FokI GGATG 7 cut(s) 18, 851, 972, 1070, 1153, 1457, 1479
Fsp4HI GCNGC 1 cut(s) 231
FspBI CTAG 3 cut(s) 152, 555, 1523
GlaI GCGC 1 cut(s) 934
GluI GCNGC 1 cut(s) 231
HaeII RGCGCY 1 cut(s) 936
HaeIII GGCC 3 cut(s) 773, 789, 1149
HapII CCGG 4 cut(s) 1021, 1146, 1315, 1353
HhaI GCGC 1 cut(s) 935
Hin1I GRCGYC 1 cut(s) 321
Hin6I GCGC 1 cut(s) 933
HinP1I GCGC 1 cut(s) 933
HincII GTYRAC 1 cut(s) 33
HindII GTYRAC 1 cut(s) 33
HindIII AAGCTT 1 cut(s) 299
HinfI GANTC 7 cut(s) 461, 742, 796, 853, 1025, 1321, 1463
HpaII CCGG 4 cut(s) 1021, 1146, 1315, 1353
HphI GGTGA 2 cut(s) 353, 370
Hpy166II GTNNAC 5 cut(s) 33, 612, 878, 963, 1405
Hpy188I TCNGA 3 cut(s) 104, 172, 1140
Hpy8I GTNNAC 5 cut(s) 33, 612, 878, 963, 1405
Hpy99I CGWCG 2 cut(s) 223, 326
HpyAV CCTTC 4 cut(s) 87, 563, 854, 1115
HpyCH4III ACNGT 4 cut(s) 30, 341, 551, 1129
HpyCH4IV ACGT 1 cut(s) 321
HpyCH4V TGCA 3 cut(s) 309, 1009, 1405
HpyF10VI GCNNNNNNNGC 5 cut(s) 97, 230, 939, 982, 1437
HpyF3I CTNAG 4 cut(s) 52, 101, 225, 711
HpySE526I ACGT 1 cut(s) 321
Hsp92I GRCGYC 1 cut(s) 321
HspAI GCGC 1 cut(s) 933
Ksp22I TGATCA 2 cut(s) 444, 1092
Kzo9I GATC 8 cut(s) 172, 256, 444, 748, 757, 805, 1092, 1225
LmnI GCTCC 5 cut(s) 96, 143, 595, 1331, 1433
Lsp1109I GCAGC 1 cut(s) 217
LweI GCATC 3 cut(s) 492, 994, 1501
MaeI CTAG 3 cut(s) 152, 555, 1523
MaeII ACGT 1 cut(s) 321
MaeIII GTNAC 3 cut(s) 55, 529, 1169
MalI GATC 8 cut(s) 174, 258, 446, 750, 759, 807, 1094, 1227
MboI GATC 8 cut(s) 172, 256, 444, 748, 757, 805, 1092, 1225
MboII GAAGA 4 cut(s) 283, 373, 437, 1233
MflI RGATCY 1 cut(s) 1225
MhlI GDGCHC 2 cut(s) 102, 1407
MlsI TGGCCA 1 cut(s) 789
MluCI AATT 9 cut(s) 263, 310, 582, 695, 1004, 1176, 1215, 1356, 1396
MluNI TGGCCA 1 cut(s) 789
MlyI GAGTC 1 cut(s) 1034
Mox20I TGGCCA 1 cut(s) 789
MscI TGGCCA 1 cut(s) 789
MseI TTAA 7 cut(s) 378, 456, 485, 678, 980, 1179, 1377
MslI CAYNNNNRTG 2 cut(s) 1199, 1472
Msp20I TGGCCA 1 cut(s) 789
MspCI CTTAAG 1 cut(s) 484
MspI CCGG 4 cut(s) 1021, 1146, 1315, 1353
MspR9I CCNGG 3 cut(s) 1022, 1353, 1428
Mva1269I GAATGC 1 cut(s) 1090
MvaI CCWGG 1 cut(s) 1428
MvnI CGCG 1 cut(s) 237
MwoI GCNNNNNNNGC 5 cut(s) 97, 230, 939, 982, 1437
NciI CCSGG 2 cut(s) 1022, 1353
NcoI CCATGG 3 cut(s) 327, 653, 1368
NdeII GATC 8 cut(s) 172, 256, 444, 748, 757, 805, 1092, 1225
NlaIV GGNNCC 2 cut(s) 12, 333
NmuCI GTSAC 1 cut(s) 529
NspI RCATGY 1 cut(s) 1477
PaeI GCATGC 1 cut(s) 1477
PaeR7I CTCGAG 1 cut(s) 848
PagI TCATGA 2 cut(s) 441, 477
PaqCI CACCTGC 1 cut(s) 346
PcsI WCGNNNNNNNCGW 1 cut(s) 409
PctI GAATGC 1 cut(s) 1090
PfeI GAWTC 6 cut(s) 461, 742, 796, 853, 1321, 1463
PflMI CCANNNNNTGG 1 cut(s) 1156
PfoI TCCNGGA 2 cut(s) 1020, 1351
PkrI GCNGC 1 cut(s) 232
PleI GAGTC 1 cut(s) 1033
PpsI GAGTC 1 cut(s) 1033
PshAI GACNNNNGTC 1 cut(s) 280
PshBI ATTAAT 1 cut(s) 456
PsiI TTATAA 1 cut(s) 1299
Psp6I CCWGG 1 cut(s) 1426
PspGI CCWGG 1 cut(s) 1426
PspN4I GGNNCC 2 cut(s) 12, 333
PspPI GGNCC 3 cut(s) 42, 181, 1018
PsuI RGATCY 1 cut(s) 1225
RsaI GTAC 4 cut(s) 347, 548, 1131, 1256
RsaNI GTAC 4 cut(s) 346, 547, 1130, 1255
RseI CAYNNNNRTG 2 cut(s) 1199, 1472
SaqAI TTAA 7 cut(s) 378, 456, 485, 678, 980, 1179, 1377
SatI GCNGC 1 cut(s) 231
Sau3AI GATC 8 cut(s) 172, 256, 444, 748, 757, 805, 1092, 1225
Sau96I GGNCC 3 cut(s) 42, 181, 1018
ScaI AGTACT 1 cut(s) 347
SchI GAGTC 1 cut(s) 1034
ScrFI CCNGG 3 cut(s) 1022, 1353, 1428
SduI GDGCHC 2 cut(s) 102, 1407
SfaNI GCATC 3 cut(s) 492, 994, 1501
SfcI CTRYAG 1 cut(s) 561
Sfr274I CTCGAG 1 cut(s) 848
SinI GGWCC 3 cut(s) 42, 181, 1018
SlaI CTCGAG 1 cut(s) 848
SmiMI CAYNNNNRTG 2 cut(s) 1199, 1472
SmlI CTYRAG 3 cut(s) 385, 484, 848
SmoI CTYRAG 3 cut(s) 385, 484, 848
SphI GCATGC 1 cut(s) 1477
Sse9I AATT 9 cut(s) 263, 310, 582, 695, 1004, 1176, 1215, 1356, 1396
SsiI CCGC 4 cut(s) 235, 1031, 1431, 1440
SspMI CTAG 3 cut(s) 152, 555, 1523
StyD4I CCNGG 3 cut(s) 1020, 1351, 1426
StyI CCWWGG 4 cut(s) 327, 653, 989, 1368
TaaI ACNGT 4 cut(s) 30, 341, 551, 1129
TaiI ACGT 1 cut(s) 324
TaqI TCGA 4 cut(s) 261, 720, 849, 1486
TasI AATT 9 cut(s) 263, 310, 582, 695, 1004, 1176, 1215, 1356, 1396
TatI WGTACW 3 cut(s) 345, 546, 1129
TfiI GAWTC 6 cut(s) 461, 742, 796, 853, 1321, 1463
Tru1I TTAA 7 cut(s) 378, 456, 485, 678, 980, 1179, 1377
Tru9I TTAA 7 cut(s) 378, 456, 485, 678, 980, 1179, 1377
TscAI CASTG 5 cut(s) 210, 517, 556, 781, 1474
TseFI GTSAC 1 cut(s) 529
TseI GCWGC 1 cut(s) 230
Tsp45I GTSAC 1 cut(s) 529
TspDTI ATGAA 5 cut(s) 260, 474, 494, 1013, 1088
TspRI CASTG 5 cut(s) 210, 517, 556, 781, 1474
Van91I CCANNNNNTGG 1 cut(s) 1156
Vha464I CTTAAG 1 cut(s) 484
VneI GTGCAC 1 cut(s) 1403
VpaK11BI GGWCC 3 cut(s) 42, 181, 1018
VspI ATTAAT 1 cut(s) 456
XapI RAATTY 3 cut(s) 263, 1356, 1396
XceI RCATGY 1 cut(s) 1477
XcmI CCANNNNNNNNNTGG 1 cut(s) 660
XhoI CTCGAG 1 cut(s) 848
XspI CTAG 3 cut(s) 152, 555, 1523
ZraI GACGTC 1 cut(s) 322
ZrmI AGTACT 1 cut(s) 347
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.