MD06G1163800.v1.1

Cytochrome p450

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr06
Physical Location & Seq
Reverse (-)
30466170 .. 30468271
2102 bp
Loading structure...
UTR
Exon/CDS
Intron
MD06G1163800.v1.1.491

Sequence Viewer

Length: 1602 bp
ATGATCTATACCTTATATAAACACACAAGCGCAGCAAACACACCCACACTATTGGCCATAAATTTTCTTCTCCCAAATAGGACTATGATGCTGGAGAATGAAACCTCCTCCTTTTTGCAACCTTTGGCCTTCACACTGCTGGCCATTTTCATCATCCTCATATACAGATGGTACTCCACCACAACCACCAACAAAACCTCATCACCACCTTCTCCACCGAAGCTCCCTATCATCGGAAACTTTCACCAAATAGGCTTGGACCCTCATCGCTCACTGCACAAATTATCTCAACGCCATGGCCCTCTCATGCTTCTTCACTTCGGACGTGTCCCGGTCCTTGTTGTCTCTTCGGCTCAGGCAGCTCAGGAGATCATGAAAACCCATGACCACACATTTTCTGATCGACCCAAGTCCACCAACTTTGAGAAGCTTCTCTACAACTGTAAAGACGTTGCATCTGCTCCTTATGGTGAGCATTGGAGGAAGGTGAAAAGTATATGTGTCATACATCTTTTGAGCAACAAGAGGGTTCGCTCTTTTCGCTTTGTGAGAGAAGAGGAAACCAAATCCATGATCAGCGACATAATGAAATCATCACCATCAGTTTTGAATTTAAGCGAAATGTTTCTGAGGCTTACCAATGATGTTGTATCTAGAGTGGCTCTGGGGAGGAAGTACAGTGGTGAAGGTGGGATGAAGTTTGAGGGACTTTTGCGGGAGTTCTTTGAGTTATTGGGAACTACTAAAATTGGTGACTATATCCCATGGCTTTCTTGGTTGAGCCGTGTCAACGGTTTGGAAGCCAAGTTCGACAAGGTGGCTAAGAAGTTTGATGACTTTTTAGATAAAGTGGTCCAAGAGCACATGGATCAGAGTCCAAAGACTGGAGATGATGACCAAGCGGATTTTGTCGATGTTTTGCTTGCAATTCAGAAAGAAAACTTGCCTGGTTTTTCTATTGATACAGTTACTATAAAAGCTCTCATCTTGGATATGTTTACTGCTGGCACTCATACAGCATCTACAGTCCTAGAGTGGGCAATGACTGAGCTTTTAAGGCATCCTAGGGTCATGAAAAAGTTGCAGAATGAAGTACGTGAAATGGTCCGAAAGGAAGAACTCATAACAGAGGATGATTCGATTGAAATGCACTACTTGAAGGCGGTGATAAAGGAGACTCTTCGCTTACATCCACCAGTTCCACTACTATTGCCCAGGATTGCGACCCAAGATGCGGAAATAGGTGGTTACAAAATTAAAACCAAGACACACGTTATGATCAATGCATGGCAAATTGGAAGAGATCCCAAACTATATGAAAAACCAGAGGAGTTCGAGCCAGAAAGGTTCTTGAATAGTGAGGTAGATTATAAAGGGAATGACTTTCAGTTAATTCCATTTGGTGCCGGTAGGAGGGTCTGTCCTGGAATTCAGTTTGGCATGACTCTTAATGAGATTGCCTTGGCAAATATCGTGCACAAGTTCGACTGGGAGTTGCCTGGTGGAGCAAGTGGGGAGGATTTAGATACGACTGAATCTACGGGTATAACAGTCCACAGAAAATATCCTCTCAGAGCTGTTGCTATTCCATATTTATGTTGA

Protein Analysis

534

Amino Acids

60.69

Weight (kDa)

7.74

Isoelectric Point (pI)

36.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 69 - 518 1e-107 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000061)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G48270 AT3G48280 AT3G48290 AT3G48290 AT3G48300 AT3G48300 AT3G48310 AT3G48320 AT4G20235 AT4G20235
fragaria_vesca FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g36190 FvH4_3g14160 FvH4_3g14210 FvH4_3g14260 FvH4_3g14260 FvH4_3g21100 FvH4_3g21380 FvH4_4g24460 FvH4_4g24500 FvH4_5g06571 FvH4_5g06571 FvH4_5g06571 FvH4_5g06571 FvH4_5g06572 FvH4_5g06573 FvH4_5g06574 FvH4_5g06575 FvH4_5g06576 FvH4_5g06577 FvH4_5g06577 FvH4_5g07540 FvH4_5g07550 FvH4_5g07560 FvH4_5g07570 FvH4_5g29491 FvH4_5g29492 FvH4_6g23870 FvH4_6g23880 FvH4_6g26870 FvH4_7g11861 FvH4_7g11862 FvH4_7g13050 FvH4_7g13060 FvH4_7g13080 FvH4_7g13080 FvH4_7g22630 FvH4_7g22650 FvH4_7g22651 FvH4_7g23020
malus_domestica MD03G1207400.v1.1 MD03G1214800.v1.1 MD03G1218500.v1.1 MD06G1163100.v1.1 MD06G1163300.v1.1 MD06G1163400.v1.1 MD06G1163500.v1.1 MD06G1163600.v1.1 MD06G1163800.v1.1 MD06G1164000.v1.1 MD06G1164100.v1.1 MD06G1224400.v1.1 MD08G1222800.v1.1 MD08G1222900.v1.1 MD08G1223100.v1.1 MD11G1091500.v1.1 MD11G1091800.v1.1 MD14G1163200.v1.1 MD14G1169000.v1.1 MD15G1207200.v1.1 MD15G1207300.v1.1 MD17G1259400.v1.1
prunus_persica Prupe.4G198100_v2.0.a1 Prupe.4G199100_v2.0.a1 Prupe.4G199400_v2.0.a1 Prupe.4G199800_v2.0.a1 Prupe.4G225200_v2.0.a1 Prupe.4G239100_v2.0.a1 Prupe.5G156600_v2.0.a1 Prupe.5G163500_v2.0.a1 Prupe.7G209500_v2.0.a1 Prupe.I003400_v2.0.a1
pyrus_communis pycom03g16340 pycom06g14600 pycom06g14610 pycom06g14620 pycom06g14630 pycom06g14640 pycom06g14670 pycom06g14690 pycom08g19390 pycom08g19400 pycom08g19410 pycom11g07600 pycom11g07610 pycom11g07620 pycom11g07660 pycom14g13580 pycom14g14080 pycom14g14100 pycom14g14110 pycom15g18380 pycom17g26080
rosa_chinensis RchiOBHm_Chr1g0339441 RchiOBHm_Chr1g0339451 RchiOBHm_Chr1g0352191 RchiOBHm_Chr1g0368221 RchiOBHm_Chr2g0129531 RchiOBHm_Chr2g0129541 RchiOBHm_Chr3g0477631 RchiOBHm_Chr3g0482551 RchiOBHm_Chr3g0482561 RchiOBHm_Chr3g0482571 RchiOBHm_Chr4g0411601 RchiOBHm_Chr4g0422181 RchiOBHm_Chr5g0036661 RchiOBHm_Chr5g0036731 RchiOBHm_Chr6g0274021 RchiOBHm_Chr7g0190921 RchiOBHm_Chr7g0190931 RchiOBHm_Chr7g0190941 RchiOBHm_Chr7g0190951 RchiOBHm_Chr7g0190961 RchiOBHm_Chr7g0190971 RchiOBHm_Chr7g0191001 RchiOBHm_Chr7g0191011 RchiOBHm_Chr7g0191021 RchiOBHm_Chr7g0192181 RchiOBHm_Chr7g0192191 RchiOBHm_Chr7g0192201 RchiOBHm_Chr7g0192221 RchiOBHm_Chr7g0192231 RchiOBHm_Chr7g0192281 RchiOBHm_Chr7g0197311
rosa_laevigata RLG00000003942 RLG00000004345 RLG00000004379 RLG00000004383 RLG00000004384 RLG00000004385 RLG00000004387 RLG00000004388 RLG00000004389 RLG00000004480 RLG00000004481 RLG00000004482 RLG00000004483 RLG00000004485 RLG00000008342 RLG00000008401 RLG00000013583 RLG00000017044 RLG00000027229 RLG00000028349 RLG00000028350 RLG00000028353 RLG00000028820 RLG00000033707 RLG00000033710
rosa_multiflora Rmu_co8020340.1_g000001 Rmu_co8096640.1_g000001 Rmu_co8214930.1_g000001 Rmu_co8223272.1_g000001 Rmu_co8282535.1_g000001 Rmu_co8343567.1_g000001 Rmu_co8404191.1_g000001 Rmu_co8455157.1_g000001 Rmu_sc0000062.1_g000028 Rmu_sc0000082.1_g000091 Rmu_sc0000509.1_g000017 Rmu_sc0000775.1_g000001 Rmu_sc0000999.1_g000034 Rmu_sc0001559.1_g000004 Rmu_sc0001559.1_g000009 Rmu_sc0002164.1_g000001 Rmu_sc0002164.1_g000005 Rmu_sc0002164.1_g000007 Rmu_sc0002164.1_g000008 Rmu_sc0002164.1_g000009 Rmu_sc0002164.1_g000019 Rmu_sc0002247.1_g000009 Rmu_sc0002373.1_g000002 Rmu_sc0002373.1_g000003 Rmu_sc0002944.1_g000059 Rmu_sc0003930.1_g000004 Rmu_sc0004958.1_g000001 Rmu_sc0005197.1_g000014 Rmu_sc0005898.1_g000008 Rmu_sc0005898.1_g000009 Rmu_sc0005898.1_g000015 Rmu_sc0006059.1_g000004 Rmu_sc0006059.1_g000010 Rmu_sc0006903.1_g000007 Rmu_sc0006903.1_g000008 Rmu_sc0006968.1_g000001 Rmu_sc0011009.1_g000009 Rmu_sc0022852.1_g000002 Rmu_sc0033854.1_g000001 Rmu_ssc0000421.1_g000057 Rmu_ssc0000421.1_g000067 Rmu_ssc0000421.1_g000069 Rmu_ssc0000421.1_g000072 Rmu_ssc0000421.1_g000081 Rmu_ssc0000421.1_g000086
rosa_roxburghii Rroxscaffold_158G00443680 Rroxscaffold_158G00443710 Rroxscaffold_158G00443720 Rroxscaffold_158G00443740 Rroxscaffold_1G00034950 Rroxscaffold_1G00044240 Rroxscaffold_1G00044270 Rroxscaffold_3G00241380 Rroxscaffold_3G00247000 Rroxscaffold_3G00263120 Rroxscaffold_3G00263150 Rroxscaffold_3G00263160 Rroxscaffold_3G00263170 Rroxscaffold_3G00263180 Rroxscaffold_3G00263190 Rroxscaffold_3G00263210 Rroxscaffold_3G00263230 Rroxscaffold_3G00263260 Rroxscaffold_3G00264110 Rroxscaffold_3G00264130 Rroxscaffold_3G00264160 Rroxscaffold_3G00264180 Rroxscaffold_3G00264200 Rroxscaffold_4G00288750 Rroxscaffold_4G00303110 Rroxscaffold_4G00303120 Rroxscaffold_4G00322280 Rroxscaffold_5G00356200 Rroxscaffold_6G00399150 Rroxscaffold_6G00399290 Rroxscaffold_7G00194770
rosa_rugosa Rorug01G0225300 Rorug01G0225400 Rorug01G0225800 Rorug01G0226000 Rorug01G0339400 Rorug01G0451500 Rorug03G0196900 Rorug03G0294900 Rorug04G0107500 Rorug04G0107600 Rorug04G0129700 Rorug04G0178000 Rorug05G0144900.1 Rorug05G0145000 Rorug05G0228000 Rorug05G0228600 Rorug06G0078300 Rorug06G0508000 Rorug06G0508100 Rorug06G0508100 Rorug06G0508400 Rorug06G0513400 Rorug07G0000100 Rorug07G0000200 Rorug07G0000300 Rorug07G0000500 Rorug07G0000800
rosa_samantha Rh1BG060400 Rh1BG210300 Rh1BG210700 Rh1BG210800 Rh1BG309800 Rh1CG223800 Rh1CG224200 Rh1CG325200 Rh1DG237000 Rh1DG237400 Rh1DG341600 Rh2DG365700 Rh3AG212500 Rh3AG248400 Rh3CG239800 Rh3DG239300 Rh4AG169300 Rh4BG166200 Rh4BG240500 Rh4BG240600 Rh4DG163600 Rh5AG249600 Rh5AG249900 Rh5AG250000 Rh5CG283100 Rh5CG283200 Rh5CG283400 Rh5DG259200 Rh5DG259800 Rh6BG197700 Rh6CG197800 Rh6DG189400 Rh7AG114900 Rh7AG115000 Rh7AG115200 Rh7AG115300 Rh7AG115400 Rh7AG115500 Rh7AG123900 Rh7AG124100 Rh7AG124300 Rh7BG117200 Rh7BG117400 Rh7BG118400 Rh7BG125400 Rh7BG125600 Rh7BG125700 Rh7BG125800 Rh7BG125900 Rh7BG126000 Rh7BG126400 Rh7BG126600 Rh7BG126700 Rh7BG166200 Rh7DG118600 Rh7DG118700 Rh7DG118900 Rh7DG119000 Rh7DG119100 Rh7DG127400 Rh7DG127600 Rh7DG127700 Rh7DG127900 Rh7DG128200
rosa_wichuraiana Rw1G013270 Rw1G020790 Rw2G027890 Rw2G028040 Rw3G019240 Rw4G014070 Rw4G020540 Rw5G021320 Rw5G022970 Rw6G016920 Rw7G010020 Rw7G010040 Rw7G010580 Rw7G010590 Rw7G010600 Rw7G010610 Rw7G010620 Rw7G010630 Rw7G010640 Rw7G010690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1371
AccB1I GGYRCC 1 cut(s) 1403
AccB7I CCANNNNNTGG 1 cut(s) 884
AciI CCGC 4 cut(s) 715, 902, 1163, 1235
AclWI GGATC 2 cut(s) 876, 1298
AcoI YGGCCR 2 cut(s) 54, 141
AcsI RAATTY 3 cut(s) 61, 610, 1428
AfaI GTAC 3 cut(s) 173, 677, 1095
AfiI CCNNNNNNNGG 5 cut(s) 233, 884, 1036, 1234, 1413
AflIII ACRYGT 2 cut(s) 325, 1270
AgsI TTSAA 4 cut(s) 610, 1145, 1159, 1354
AjiI CACGTC 1 cut(s) 326
AjnI CCWGG 4 cut(s) 946, 1214, 1423, 1498
AloI GAACNNNNNNTCC 2 cut(s) 791, 823
AluBI AGCT 6 cut(s) 223, 362, 430, 980, 1051, 1577
AluI AGCT 6 cut(s) 223, 362, 430, 980, 1051, 1577
Alw21I GWGCWC 2 cut(s) 864, 1479
Alw26I GTCTC 2 cut(s) 349, 1169
Alw44I GTGCAC 1 cut(s) 1475
AlwI GGATC 2 cut(s) 876, 1298
AoxI GGCC 4 cut(s) 54, 126, 141, 298
ApaLI GTGCAC 1 cut(s) 1475
ApeKI GCWGC 2 cut(s) 32, 359
ApoI RAATTY 3 cut(s) 61, 610, 1428
Asp700I GAANNNNTTC 1 cut(s) 624
AspA2I CCTAGG 1 cut(s) 1064
AspLEI GCGC 1 cut(s) 32
AspS9I GGNCC 5 cut(s) 259, 299, 334, 853, 1105
AsuC2I CCSGG 1 cut(s) 332
AsuHPI GGTGA 8 cut(s) 195, 236, 482, 499, 588, 695, 764, 1177
AvaII GGWCC 4 cut(s) 259, 334, 853, 1105
AvrII CCTAGG 1 cut(s) 1064
BaeGI GKGCMC 1 cut(s) 1479
BalI TGGCCA 2 cut(s) 56, 143
BanI GGYRCC 1 cut(s) 1403
BarI GAAGNNNNNNTAC 2 cut(s) 419, 451
Bbv12I GWGCWC 2 cut(s) 864, 1479
BbvI GCAGC 2 cut(s) 44, 371
BccI CCATC 2 cut(s) 162, 607
BceAI ACGGC 1 cut(s) 768
BcgI CGANNNNNNTGC 2 cut(s) 1129, 1163
BciT130I CCWGG 4 cut(s) 948, 1216, 1425, 1500
BclI TGATCA 2 cut(s) 573, 1278
BcnI CCSGG 1 cut(s) 332
BcoDI GTCTC 2 cut(s) 349, 1169
BfaI CTAG 3 cut(s) 654, 1031, 1065
BfmI CTRYAG 1 cut(s) 1023
BisI GCNGC 2 cut(s) 33, 360
BlnI CCTAGG 1 cut(s) 1064
BlsI GCNGC 2 cut(s) 34, 361
Bme1390I CCNGG 5 cut(s) 332, 948, 1216, 1425, 1500
Bme18I GGWCC 4 cut(s) 259, 334, 853, 1105
BmgBI CACGTC 1 cut(s) 326
BmgT120I GGNCC 5 cut(s) 259, 299, 334, 853, 1105
BmiI GGNNCC 2 cut(s) 261, 1405
BmrFI CCNGG 5 cut(s) 332, 948, 1216, 1425, 1500
BmrI ACTGGG 1 cut(s) 1498
BmsI GCATC 5 cut(s) 78, 464, 1028, 1069, 1222
BmuI ACTGGG 1 cut(s) 1498
BoxI GACNNNNGTC 1 cut(s) 409
BpmI CTGGAG 2 cut(s) 113, 906
Bpu10I CCTNAGC 2 cut(s) 354, 363
BpuMI CCSGG 1 cut(s) 332
BsaAI YACGTR 1 cut(s) 1097
BsaJI CCNNGG 5 cut(s) 295, 764, 1064, 1214, 1461
BsaXI ACNNNNNCTCC 4 cut(s) 207, 237, 1405, 1435
Bsc4I CCNNNNNNNGG 5 cut(s) 233, 884, 1036, 1234, 1413
Bse118I RCCGGY 1 cut(s) 1406
Bse1I ACTGG 3 cut(s) 889, 1196, 1493
Bse3DI GCAATG 1 cut(s) 1047
BseBI CCWGG 4 cut(s) 948, 1216, 1425, 1500
BseDI CCNNGG 5 cut(s) 295, 764, 1064, 1214, 1461
BseGI GGATG 5 cut(s) 153, 699, 1060, 1138, 1189
BseLI CCNNNNNNNGG 5 cut(s) 233, 884, 1036, 1234, 1413
BseMI GCAATG 1 cut(s) 1047
BseMII CTCAG 5 cut(s) 368, 377, 620, 1038, 1585
BseNI ACTGG 3 cut(s) 889, 1196, 1493
BseRI GAGGAG 2 cut(s) 97, 1343
BseSI GKGCMC 1 cut(s) 1479
BseXI GCAGC 2 cut(s) 44, 371
BsgI GTGCAG 1 cut(s) 260
BshFI GGCC 4 cut(s) 56, 128, 143, 300
BshNI GGYRCC 1 cut(s) 1403
BsiHKAI GWGCWC 2 cut(s) 864, 1479
BsiSI CCGG 2 cut(s) 332, 1407
BslFI GGGAC 2 cut(s) 314, 720
BslI CCNNNNNNNGG 5 cut(s) 233, 884, 1036, 1234, 1413
BsmAI GTCTC 2 cut(s) 349, 1169
BsmFI GGGAC 2 cut(s) 314, 720
BsnI GGCC 4 cut(s) 56, 128, 143, 300
Bsp1286I GDGCHC 2 cut(s) 864, 1479
Bsp143I GATC 7 cut(s) 3, 369, 400, 573, 868, 1278, 1303
Bsp19I CCATGG 2 cut(s) 295, 764
BspACI CCGC 4 cut(s) 715, 902, 1163, 1235
BspANI GGCC 4 cut(s) 56, 128, 143, 300
BspCNI CTCAG 5 cut(s) 367, 376, 621, 1039, 1584
BspHI TCATGA 2 cut(s) 372, 1071
BspLI GGNNCC 2 cut(s) 261, 1405
BspPI GGATC 2 cut(s) 876, 1298
BspT107I GGYRCC 1 cut(s) 1403
BsrDI GCAATG 1 cut(s) 1047
BsrFI RCCGGY 1 cut(s) 1406
BsrI ACTGG 3 cut(s) 889, 1196, 1493
BssAI RCCGGY 1 cut(s) 1406
BssECI CCNNGG 5 cut(s) 295, 764, 1064, 1214, 1461
BssMI GATC 7 cut(s) 3, 369, 400, 573, 868, 1278, 1303
BssT1I CCWWGG 4 cut(s) 295, 764, 1064, 1461
Bst2UI CCWGG 4 cut(s) 948, 1216, 1425, 1500
Bst4CI ACNGT 6 cut(s) 443, 680, 794, 967, 1027, 1552
Bst6I CTCTTC 4 cut(s) 352, 549, 1185, 1294
BstBAI YACGTR 1 cut(s) 1097
BstC8I GCNNGC 3 cut(s) 141, 924, 1006
BstDEI CTNAG 6 cut(s) 354, 363, 629, 822, 1047, 1571
BstDSI CCRYGG 2 cut(s) 295, 764
BstF5I GGATG 5 cut(s) 153, 699, 1060, 1138, 1189
BstHHI GCGC 1 cut(s) 32
BstKTI GATC 7 cut(s) 6, 372, 403, 576, 871, 1281, 1306
BstMAI GTCTC 2 cut(s) 349, 1169
BstMBI GATC 7 cut(s) 3, 369, 400, 573, 868, 1278, 1303
BstMWI GCNNNNNNNGC 3 cut(s) 359, 540, 1057
BstNI CCWGG 4 cut(s) 948, 1216, 1425, 1500
BstPAI GACNNNNGTC 1 cut(s) 409
BstSCI CCNGG 5 cut(s) 330, 946, 1214, 1423, 1498
BstSFI CTRYAG 1 cut(s) 1023
BstSLI GKGCMC 1 cut(s) 1479
BstV1I GCAGC 2 cut(s) 44, 371
BstX2I RGATCY 1 cut(s) 1303
BstXI CCANNNNNNTGG 1 cut(s) 52
BstYI RGATCY 1 cut(s) 1303
BsuRI GGCC 4 cut(s) 56, 128, 143, 300
BtgI CCRYGG 2 cut(s) 295, 764
BtgZI GCGATG 1 cut(s) 251
BtrI CACGTC 1 cut(s) 326
BtsCI GGATG 5 cut(s) 153, 699, 1060, 1138, 1189
BtsI GCAGTG 2 cut(s) 134, 272
BtsIMutI CAGTG 3 cut(s) 134, 272, 685
Cac8I GCNNGC 3 cut(s) 141, 924, 1006
CciI TCATGA 2 cut(s) 372, 1071
CfoI GCGC 1 cut(s) 32
Cfr10I RCCGGY 1 cut(s) 1406
Cfr13I GGNCC 5 cut(s) 259, 299, 334, 853, 1105
Csp6I GTAC 3 cut(s) 172, 676, 1094
CspCI CAANNNNNGTGG 4 cut(s) 403, 438, 1191, 1226
CviQI GTAC 3 cut(s) 172, 676, 1094
DdeI CTNAG 6 cut(s) 354, 363, 629, 822, 1047, 1571
DpnI GATC 7 cut(s) 5, 371, 402, 575, 870, 1280, 1305
DpnII GATC 7 cut(s) 3, 369, 400, 573, 868, 1278, 1303
EaeI YGGCCR 2 cut(s) 54, 141
Eam1104I CTCTTC 4 cut(s) 352, 549, 1185, 1294
EarI CTCTTC 4 cut(s) 352, 549, 1185, 1294
Eco130I CCWWGG 4 cut(s) 295, 764, 1064, 1461
Eco47I GGWCC 4 cut(s) 259, 334, 853, 1105
EcoRI GAATTC 1 cut(s) 1428
EcoRII CCWGG 4 cut(s) 946, 1214, 1423, 1498
EcoT14I CCWWGG 4 cut(s) 295, 764, 1064, 1461
EcoT22I ATGCAT 1 cut(s) 1288
ErhI CCWWGG 4 cut(s) 295, 764, 1064, 1461
FaqI GGGAC 2 cut(s) 314, 720
FauI CCCGC 1 cut(s) 708
FbaI TGATCA 2 cut(s) 573, 1278
Fnu4HI GCNGC 2 cut(s) 33, 360
FokI GGATG 5 cut(s) 140, 706, 1047, 1145, 1176
Fsp4HI GCNGC 2 cut(s) 33, 360
FspBI CTAG 3 cut(s) 654, 1031, 1065
GlaI GCGC 1 cut(s) 31
GluI GCNGC 2 cut(s) 33, 360
GsuI CTGGAG 2 cut(s) 113, 906
HaeIII GGCC 4 cut(s) 56, 128, 143, 300
HapII CCGG 2 cut(s) 332, 1407
HhaI GCGC 1 cut(s) 32
Hin6I GCGC 1 cut(s) 30
HinP1I GCGC 1 cut(s) 30
HincII GTYRAC 1 cut(s) 790
HindII GTYRAC 1 cut(s) 790
HindIII AAGCTT 1 cut(s) 428
HinfI GANTC 5 cut(s) 874, 1136, 1177, 1444, 1535
HpaII CCGG 2 cut(s) 332, 1407
HphI GGTGA 8 cut(s) 195, 236, 482, 499, 588, 695, 764, 1177
Hpy166II GTNNAC 5 cut(s) 414, 790, 999, 1477, 1555
Hpy188I TCNGA 8 cut(s) 236, 323, 400, 630, 873, 933, 1109, 1574
Hpy188III TCNNGA 5 cut(s) 365, 373, 654, 1072, 1351
Hpy8I GTNNAC 5 cut(s) 414, 790, 999, 1477, 1555
HpyAV CCTTC 5 cut(s) 139, 219, 478, 680, 1153
HpyCH4III ACNGT 6 cut(s) 443, 680, 794, 967, 1027, 1552
HpyCH4IV ACGT 4 cut(s) 325, 450, 1096, 1272
HpyCH4V TGCA 8 cut(s) 118, 277, 455, 926, 1084, 1150, 1286, 1477
HpyF10VI GCNNNNNNNGC 3 cut(s) 359, 540, 1057
HpyF3I CTNAG 6 cut(s) 354, 363, 629, 822, 1047, 1571
HpySE526I ACGT 4 cut(s) 325, 450, 1096, 1272
HspAI GCGC 1 cut(s) 30
Ksp22I TGATCA 2 cut(s) 573, 1278
Kzo9I GATC 7 cut(s) 3, 369, 400, 573, 868, 1278, 1303
LmnI GCTCC 3 cut(s) 228, 466, 1505
Lsp1109I GCAGC 2 cut(s) 44, 371
LweI GCATC 5 cut(s) 78, 464, 1028, 1069, 1222
MaeI CTAG 3 cut(s) 654, 1031, 1065
MaeII ACGT 4 cut(s) 325, 450, 1096, 1272
MaeIII GTNAC 3 cut(s) 752, 967, 1247
MalI GATC 7 cut(s) 5, 371, 402, 575, 870, 1280, 1305
MboI GATC 7 cut(s) 3, 369, 400, 573, 868, 1278, 1303
MboII GAAGA 7 cut(s) 59, 305, 339, 566, 1127, 1172, 1311
MflI RGATCY 1 cut(s) 1303
MhlI GDGCHC 2 cut(s) 864, 1479
MlsI TGGCCA 2 cut(s) 56, 143
MluCI AATT 9 cut(s) 61, 281, 610, 747, 927, 1254, 1293, 1392, 1428
MluNI TGGCCA 2 cut(s) 56, 143
MlyI GAGTC 3 cut(s) 883, 1171, 1438
Mox20I TGGCCA 2 cut(s) 56, 143
Mph1103I ATGCAT 1 cut(s) 1288
MroXI GAANNNNTTC 1 cut(s) 624
MscI TGGCCA 2 cut(s) 56, 143
MseI TTAA 5 cut(s) 614, 1055, 1257, 1391, 1449
MslI CAYNNNNRTG 1 cut(s) 1594
Msp20I TGGCCA 2 cut(s) 56, 143
MspI CCGG 2 cut(s) 332, 1407
MspR9I CCNGG 5 cut(s) 332, 948, 1216, 1425, 1500
MvaI CCWGG 4 cut(s) 948, 1216, 1425, 1500
MwoI GCNNNNNNNGC 3 cut(s) 359, 540, 1057
NciI CCSGG 1 cut(s) 332
NcoI CCATGG 2 cut(s) 295, 764
NdeII GATC 7 cut(s) 3, 369, 400, 573, 868, 1278, 1303
NlaIV GGNNCC 2 cut(s) 261, 1405
NmuCI GTSAC 1 cut(s) 752
NsiI ATGCAT 1 cut(s) 1288
PagI TCATGA 2 cut(s) 372, 1071
PdmI GAANNNNTTC 1 cut(s) 624
PfeI GAWTC 2 cut(s) 1136, 1535
PflMI CCANNNNNTGG 1 cut(s) 884
PfoI TCCNGGA 1 cut(s) 1423
PkrI GCNGC 2 cut(s) 34, 361
PleI GAGTC 3 cut(s) 882, 1171, 1438
PpsI GAGTC 3 cut(s) 882, 1171, 1438
Ppu21I YACGTR 1 cut(s) 1097
PshAI GACNNNNGTC 1 cut(s) 409
PsiI TTATAA 1 cut(s) 1371
Psp6I CCWGG 4 cut(s) 946, 1214, 1423, 1498
PspGI CCWGG 4 cut(s) 946, 1214, 1423, 1498
PspN4I GGNNCC 2 cut(s) 261, 1405
PspPI GGNCC 5 cut(s) 259, 299, 334, 853, 1105
PsuI RGATCY 1 cut(s) 1303
RsaI GTAC 3 cut(s) 173, 677, 1095
RsaNI GTAC 3 cut(s) 172, 676, 1094
RseI CAYNNNNRTG 1 cut(s) 1594
SaqAI TTAA 5 cut(s) 614, 1055, 1257, 1391, 1449
SatI GCNGC 2 cut(s) 33, 360
Sau3AI GATC 7 cut(s) 3, 369, 400, 573, 868, 1278, 1303
Sau96I GGNCC 5 cut(s) 259, 299, 334, 853, 1105
SchI GAGTC 3 cut(s) 883, 1171, 1438
ScrFI CCNGG 5 cut(s) 332, 948, 1216, 1425, 1500
SduI GDGCHC 2 cut(s) 864, 1479
SfaNI GCATC 5 cut(s) 78, 464, 1028, 1069, 1222
SfcI CTRYAG 1 cut(s) 1023
SinI GGWCC 4 cut(s) 259, 334, 853, 1105
SmiMI CAYNNNNRTG 1 cut(s) 1594
Sse9I AATT 9 cut(s) 61, 281, 610, 747, 927, 1254, 1293, 1392, 1428
SsiI CCGC 4 cut(s) 715, 902, 1163, 1235
SspMI CTAG 3 cut(s) 654, 1031, 1065
StyD4I CCNGG 5 cut(s) 330, 946, 1214, 1423, 1498
StyI CCWWGG 4 cut(s) 295, 764, 1064, 1461
TaaI ACNGT 6 cut(s) 443, 680, 794, 967, 1027, 1552
TaiI ACGT 4 cut(s) 328, 453, 1099, 1275
TaqI TCGA 6 cut(s) 403, 810, 912, 1139, 1335, 1485
TasI AATT 9 cut(s) 61, 281, 610, 747, 927, 1254, 1293, 1392, 1428
TatI WGTACW 1 cut(s) 675
TfiI GAWTC 2 cut(s) 1136, 1535
Tru1I TTAA 5 cut(s) 614, 1055, 1257, 1391, 1449
Tru9I TTAA 5 cut(s) 614, 1055, 1257, 1391, 1449
TscAI CASTG 3 cut(s) 141, 279, 685
TseFI GTSAC 1 cut(s) 752
TseI GCWGC 2 cut(s) 32, 359
Tsp45I GTSAC 1 cut(s) 752
TspDTI ATGAA 8 cut(s) 114, 139, 389, 602, 710, 1088, 1104, 1332
TspRI CASTG 3 cut(s) 141, 279, 685
Van91I CCANNNNNTGG 1 cut(s) 884
VneI GTGCAC 1 cut(s) 1475
VpaK11BI GGWCC 4 cut(s) 259, 334, 853, 1105
XapI RAATTY 3 cut(s) 61, 610, 1428
XbaI TCTAGA 1 cut(s) 653
XcmI CCANNNNNNNNNTGG 1 cut(s) 771
XmaJI CCTAGG 1 cut(s) 1064
XmnI GAANNNNTTC 1 cut(s) 624
XspI CTAG 3 cut(s) 654, 1031, 1065
Zsp2I ATGCAT 1 cut(s) 1288
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.