Rw2G027890

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
Physical Location & Seq
Reverse (-)
44393656 .. 44395365
1710 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G027890.1

Sequence Viewer

Length: 1497 bp
ATGGCGGAGCTTATCAATAATGAAACCCTTTCACTACTACTTGTTGCCATATTCTTCATTTTCCTATACAGGTGGTCTTCCACTTCCGCTTCCAGTTCTACTCGAAAAAACTCACCACCTTCTCCACCAAAACTCCCCATCATCGGAAACCTTCACCAACTTGTCTCACCACGGTCTCCGCCACATCGCTTACTTGGAGCCTTGTCTCAGGTCCATGGCCCTCTCATGCACCTCCACTTCGGAAGCGTCCCAGTCCTCGTCGTCTCGTCTCCCGAGGCTGCTCAGGCGATCATGAAAACACATGACCTCACGTTCAGCAGCAGGCCCGAGTCCACCGTCTCCAGAAAGCTTCTCTACAACTCAAAAGATGTGGCCACCGCGCCTTACGGCGAGTATTTCAGGCAGCTGAAGAGCATATGCGTAATGAATCTGTTGAGCACCAAAAGGGTTCGGTCTTACCGCGGCCTTAGGGAAGAGGAAACCAAAGCCATGATCAAGCAGATAAGGGATTCAAAAGGAGTAGTGAATTTGAGGGACATGATTATGACGCTTACACACAATGTCCTCTCGAGAGTGGCTCTAGGGAAGAGCTACTACAGTGATGGGGGTTTTAAAGAGCTTTCTGTTGAGCATACGACGTTGCTGGGAAGTCTTTATATTGGGGACTATATTCCATGGCTTGGTTGGTTGAGCCGTGTCACTGGTTTGGACGTGAAACTAGACAAAGTGGCTAAACGGTTTGATGACTTCTTCGATGTAAAGGAGGAGGGCGAAAAGGATTTTATAGACCTTTTACTTGAGATTCAGAAGGAAAACTCGCCTGGTTTTCGTATTGACAGAATTGGCATAAAGGGTGTCCTCATGGATATGTTTGTTGCTGGGGTTGACACCACAGCTGTGGTTCTAGAATGGGCCATGGCTGAGATGATAAAGCACCCAAGTGTCATGAGCAAATTGCAGAATGAAGTAAGGGGATCAGTAAAGAAAGCTGAAGACGACATATTAACAGAGGATGATTTGATCGATATGCACTACTTGAGGGCAGTGATCGAGGAGACTCTTCGCTTGCATCCTCCGCTTCCACTACTATTCCCTAAGATATCAAACCAAGATGTGAAAATAAATGGTTACAACATTAAAGCCAACACACAAGTCATAGTGAATGCTTGGCAAGTCGCGAGGGATCCCAAGTCGTATGTTTACAAACCAGAAGAGTTCGAGCCAGAAAGGTTCTTGAATGCTAATAGTGGTTTGAGTTATAAAGGAAATGACTTTGAGTTGATTCCGTTCGGAGCTGGCAGGAGATTGTGTCCCGGGGTTCAGTTTGGTACATCTGTTAATGAGATTGCTCTAGCAAATTTAGTGCACGAGTTTGATTGGACATTGCCTGGTGGAGTAACAAGTGAAGATCTAGACATGTCTGAGGCAGCTAGTGGTACAGTCATTCATAAAGAAGACCCTCTTAAGGCCGTTGCTATTCCATATTCATCAGCTTAA

Protein Analysis

498

Amino Acids

55.69

Weight (kDa)

6.38

Isoelectric Point (pI)

42.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 39 - 475 4.2e-88 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000061)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G48270 AT3G48280 AT3G48290 AT3G48290 AT3G48300 AT3G48300 AT3G48310 AT3G48320 AT4G20235 AT4G20235
fragaria_vesca FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g36190 FvH4_3g14160 FvH4_3g14210 FvH4_3g14260 FvH4_3g14260 FvH4_3g21100 FvH4_3g21380 FvH4_4g24460 FvH4_4g24500 FvH4_5g06571 FvH4_5g06571 FvH4_5g06571 FvH4_5g06571 FvH4_5g06572 FvH4_5g06573 FvH4_5g06574 FvH4_5g06575 FvH4_5g06576 FvH4_5g06577 FvH4_5g06577 FvH4_5g07540 FvH4_5g07550 FvH4_5g07560 FvH4_5g07570 FvH4_5g29491 FvH4_5g29492 FvH4_6g23870 FvH4_6g23880 FvH4_6g26870 FvH4_7g11861 FvH4_7g11862 FvH4_7g13050 FvH4_7g13060 FvH4_7g13080 FvH4_7g13080 FvH4_7g22630 FvH4_7g22650 FvH4_7g22651 FvH4_7g23020
malus_domestica MD03G1207400.v1.1 MD03G1214800.v1.1 MD03G1218500.v1.1 MD06G1163100.v1.1 MD06G1163300.v1.1 MD06G1163400.v1.1 MD06G1163500.v1.1 MD06G1163600.v1.1 MD06G1163800.v1.1 MD06G1164000.v1.1 MD06G1164100.v1.1 MD06G1224400.v1.1 MD08G1222800.v1.1 MD08G1222900.v1.1 MD08G1223100.v1.1 MD11G1091500.v1.1 MD11G1091800.v1.1 MD14G1163200.v1.1 MD14G1169000.v1.1 MD15G1207200.v1.1 MD15G1207300.v1.1 MD17G1259400.v1.1
prunus_persica Prupe.4G198100_v2.0.a1 Prupe.4G199100_v2.0.a1 Prupe.4G199400_v2.0.a1 Prupe.4G199800_v2.0.a1 Prupe.4G225200_v2.0.a1 Prupe.4G239100_v2.0.a1 Prupe.5G156600_v2.0.a1 Prupe.5G163500_v2.0.a1 Prupe.7G209500_v2.0.a1 Prupe.I003400_v2.0.a1
pyrus_communis pycom03g16340 pycom06g14600 pycom06g14610 pycom06g14620 pycom06g14630 pycom06g14640 pycom06g14670 pycom06g14690 pycom08g19390 pycom08g19400 pycom08g19410 pycom11g07600 pycom11g07610 pycom11g07620 pycom11g07660 pycom14g13580 pycom14g14080 pycom14g14100 pycom14g14110 pycom15g18380 pycom17g26080
rosa_chinensis RchiOBHm_Chr1g0339441 RchiOBHm_Chr1g0339451 RchiOBHm_Chr1g0352191 RchiOBHm_Chr1g0368221 RchiOBHm_Chr2g0129531 RchiOBHm_Chr2g0129541 RchiOBHm_Chr3g0477631 RchiOBHm_Chr3g0482551 RchiOBHm_Chr3g0482561 RchiOBHm_Chr3g0482571 RchiOBHm_Chr4g0411601 RchiOBHm_Chr4g0422181 RchiOBHm_Chr5g0036661 RchiOBHm_Chr5g0036731 RchiOBHm_Chr6g0274021 RchiOBHm_Chr7g0190921 RchiOBHm_Chr7g0190931 RchiOBHm_Chr7g0190941 RchiOBHm_Chr7g0190951 RchiOBHm_Chr7g0190961 RchiOBHm_Chr7g0190971 RchiOBHm_Chr7g0191001 RchiOBHm_Chr7g0191011 RchiOBHm_Chr7g0191021 RchiOBHm_Chr7g0192181 RchiOBHm_Chr7g0192191 RchiOBHm_Chr7g0192201 RchiOBHm_Chr7g0192221 RchiOBHm_Chr7g0192231 RchiOBHm_Chr7g0192281 RchiOBHm_Chr7g0197311
rosa_laevigata RLG00000003942 RLG00000004345 RLG00000004379 RLG00000004383 RLG00000004384 RLG00000004385 RLG00000004387 RLG00000004388 RLG00000004389 RLG00000004480 RLG00000004481 RLG00000004482 RLG00000004483 RLG00000004485 RLG00000008342 RLG00000008401 RLG00000013583 RLG00000017044 RLG00000027229 RLG00000028349 RLG00000028350 RLG00000028353 RLG00000028820 RLG00000033707 RLG00000033710
rosa_multiflora Rmu_co8020340.1_g000001 Rmu_co8096640.1_g000001 Rmu_co8214930.1_g000001 Rmu_co8223272.1_g000001 Rmu_co8282535.1_g000001 Rmu_co8343567.1_g000001 Rmu_co8404191.1_g000001 Rmu_co8455157.1_g000001 Rmu_sc0000062.1_g000028 Rmu_sc0000082.1_g000091 Rmu_sc0000509.1_g000017 Rmu_sc0000775.1_g000001 Rmu_sc0000999.1_g000034 Rmu_sc0001559.1_g000004 Rmu_sc0001559.1_g000009 Rmu_sc0002164.1_g000001 Rmu_sc0002164.1_g000005 Rmu_sc0002164.1_g000007 Rmu_sc0002164.1_g000008 Rmu_sc0002164.1_g000009 Rmu_sc0002164.1_g000019 Rmu_sc0002247.1_g000009 Rmu_sc0002373.1_g000002 Rmu_sc0002373.1_g000003 Rmu_sc0002944.1_g000059 Rmu_sc0003930.1_g000004 Rmu_sc0004958.1_g000001 Rmu_sc0005197.1_g000014 Rmu_sc0005898.1_g000008 Rmu_sc0005898.1_g000009 Rmu_sc0005898.1_g000015 Rmu_sc0006059.1_g000004 Rmu_sc0006059.1_g000010 Rmu_sc0006903.1_g000007 Rmu_sc0006903.1_g000008 Rmu_sc0006968.1_g000001 Rmu_sc0011009.1_g000009 Rmu_sc0022852.1_g000002 Rmu_sc0033854.1_g000001 Rmu_ssc0000421.1_g000057 Rmu_ssc0000421.1_g000067 Rmu_ssc0000421.1_g000069 Rmu_ssc0000421.1_g000072 Rmu_ssc0000421.1_g000081 Rmu_ssc0000421.1_g000086
rosa_roxburghii Rroxscaffold_158G00443680 Rroxscaffold_158G00443710 Rroxscaffold_158G00443720 Rroxscaffold_158G00443740 Rroxscaffold_1G00034950 Rroxscaffold_1G00044240 Rroxscaffold_1G00044270 Rroxscaffold_3G00241380 Rroxscaffold_3G00247000 Rroxscaffold_3G00263120 Rroxscaffold_3G00263150 Rroxscaffold_3G00263160 Rroxscaffold_3G00263170 Rroxscaffold_3G00263180 Rroxscaffold_3G00263190 Rroxscaffold_3G00263210 Rroxscaffold_3G00263230 Rroxscaffold_3G00263260 Rroxscaffold_3G00264110 Rroxscaffold_3G00264130 Rroxscaffold_3G00264160 Rroxscaffold_3G00264180 Rroxscaffold_3G00264200 Rroxscaffold_4G00288750 Rroxscaffold_4G00303110 Rroxscaffold_4G00303120 Rroxscaffold_4G00322280 Rroxscaffold_5G00356200 Rroxscaffold_6G00399150 Rroxscaffold_6G00399290 Rroxscaffold_7G00194770
rosa_rugosa Rorug01G0225300 Rorug01G0225400 Rorug01G0225800 Rorug01G0226000 Rorug01G0339400 Rorug01G0451500 Rorug03G0196900 Rorug03G0294900 Rorug04G0107500 Rorug04G0107600 Rorug04G0129700 Rorug04G0178000 Rorug05G0144900.1 Rorug05G0145000 Rorug05G0228000 Rorug05G0228600 Rorug06G0078300 Rorug06G0508000 Rorug06G0508100 Rorug06G0508100 Rorug06G0508400 Rorug06G0513400 Rorug07G0000100 Rorug07G0000200 Rorug07G0000300 Rorug07G0000500 Rorug07G0000800
rosa_samantha Rh1BG060400 Rh1BG210300 Rh1BG210700 Rh1BG210800 Rh1BG309800 Rh1CG223800 Rh1CG224200 Rh1CG325200 Rh1DG237000 Rh1DG237400 Rh1DG341600 Rh2DG365700 Rh3AG212500 Rh3AG248400 Rh3CG239800 Rh3DG239300 Rh4AG169300 Rh4BG166200 Rh4BG240500 Rh4BG240600 Rh4DG163600 Rh5AG249600 Rh5AG249900 Rh5AG250000 Rh5CG283100 Rh5CG283200 Rh5CG283400 Rh5DG259200 Rh5DG259800 Rh6BG197700 Rh6CG197800 Rh6DG189400 Rh7AG114900 Rh7AG115000 Rh7AG115200 Rh7AG115300 Rh7AG115400 Rh7AG115500 Rh7AG123900 Rh7AG124100 Rh7AG124300 Rh7BG117200 Rh7BG117400 Rh7BG118400 Rh7BG125400 Rh7BG125600 Rh7BG125700 Rh7BG125800 Rh7BG125900 Rh7BG126000 Rh7BG126400 Rh7BG126600 Rh7BG126700 Rh7BG166200 Rh7DG118600 Rh7DG118700 Rh7DG118900 Rh7DG119000 Rh7DG119100 Rh7DG127400 Rh7DG127600 Rh7DG127700 Rh7DG127900 Rh7DG128200
rosa_wichuraiana Rw1G013270 Rw1G020790 Rw2G027890 Rw2G028040 Rw3G019240 Rw4G014070 Rw4G020540 Rw5G021320 Rw5G022970 Rw6G016920 Rw7G010020 Rw7G010040 Rw7G010580 Rw7G010590 Rw7G010600 Rw7G010610 Rw7G010620 Rw7G010630 Rw7G010640 Rw7G010690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1260
AccB7I CCANNNNNTGG 1 cut(s) 680
AccII CGCG 3 cut(s) 380, 462, 1178
AciI CCGC 7 cut(s) 5, 87, 179, 378, 460, 462, 1076
AclWI GGATC 3 cut(s) 982, 1178, 1191
AcoI YGGCCR 1 cut(s) 372
AcsI RAATTY 2 cut(s) 526, 1357
AcuI CTGAAG 2 cut(s) 428, 1011
AfaI GTAC 2 cut(s) 1330, 1438
AfiI CCNNNNNNNGG 3 cut(s) 143, 680, 1465
AflII CTTAAG 1 cut(s) 1463
AflIII ACRYGT 1 cut(s) 1416
AgsI TTSAA 2 cut(s) 513, 1237
AjiI CACGTC 1 cut(s) 712
AjnI CCWGG 2 cut(s) 820, 1387
AleI CACNNNNGTG 2 cut(s) 896, 939
Alw21I GWGCWC 2 cut(s) 440, 1368
Alw26I GTCTC 7 cut(s) 169, 180, 210, 268, 273, 343, 1049
Alw44I GTGCAC 1 cut(s) 1364
AlwI GGATC 3 cut(s) 982, 1178, 1191
Ama87I CYCGRG 4 cut(s) 272, 326, 568, 1313
AoxI GGCC 6 cut(s) 217, 323, 372, 463, 912, 1467
ApaLI GTGCAC 1 cut(s) 1364
ApeKI GCWGC 4 cut(s) 278, 318, 403, 1427
ApoI RAATTY 2 cut(s) 526, 1357
AspLEI GCGC 1 cut(s) 382
AspS9I GGNCC 4 cut(s) 211, 218, 324, 912
AsuC2I CCSGG 2 cut(s) 1314, 1315
AsuHPI GGTGA 3 cut(s) 105, 146, 159
AvaI CYCGRG 4 cut(s) 272, 326, 568, 1313
AvaII GGWCC 1 cut(s) 211
AxyI CCTNAGG 1 cut(s) 467
BaeGI GKGCMC 1 cut(s) 1368
BaeI ACNNNNGTAYC 2 cut(s) 1320, 1353
BalI TGGCCA 1 cut(s) 374
BamHI GGATCC 1 cut(s) 1183
BarI GAAGNNNNNNTAC 2 cut(s) 578, 610
BauI CACGAG 1 cut(s) 1367
BbsI GAAGAC 3 cut(s) 69, 999, 1461
Bbv12I GWGCWC 2 cut(s) 440, 1368
BbvI GCAGC 4 cut(s) 265, 330, 415, 1439
BccI CCATC 2 cut(s) 146, 596
BceAI ACGGC 3 cut(s) 403, 678, 1454
BciT130I CCWGG 2 cut(s) 822, 1389
BclI TGATCA 1 cut(s) 492
BcnI CCSGG 2 cut(s) 1314, 1315
BcoDI GTCTC 7 cut(s) 169, 180, 210, 268, 273, 343, 1049
BfaI CTAG 6 cut(s) 581, 719, 905, 1352, 1412, 1431
BfmI CTRYAG 1 cut(s) 595
BfrI CTTAAG 1 cut(s) 1463
BglII AGATCT 1 cut(s) 1408
BisI GCNGC 5 cut(s) 279, 319, 404, 463, 1428
BlsI GCNGC 5 cut(s) 280, 320, 405, 464, 1429
Bme1390I CCNGG 4 cut(s) 822, 1314, 1315, 1389
Bme18I GGWCC 1 cut(s) 211
BmeT110I CYCGRG 4 cut(s) 272, 326, 568, 1313
BmgBI CACGTC 1 cut(s) 712
BmgT120I GGNCC 4 cut(s) 211, 218, 324, 912
BmiI GGNNCC 2 cut(s) 199, 1185
BmrFI CCNGG 4 cut(s) 822, 1314, 1315, 1389
BmrI ACTGGG 1 cut(s) 245
BmsI GCATC 1 cut(s) 1078
BmuI ACTGGG 1 cut(s) 245
BpiI GAAGAC 3 cut(s) 69, 999, 1461
BplI GAGNNNNNCTC 2 cut(s) 562, 594
BpmI CTGGAG 1 cut(s) 325
Bpu10I CCTNAGC 1 cut(s) 282
BpuEI CTTGAG 2 cut(s) 818, 1057
BpuMI CCSGG 2 cut(s) 1314, 1315
Bsa29I ATCGAT 1 cut(s) 1023
BsaI GGTCTC 1 cut(s) 180
BsaJI CCNNGG 8 cut(s) 170, 214, 273, 460, 674, 915, 1313, 1314
BsaXI ACNNNNNCTCC 4 cut(s) 117, 147, 1294, 1324
Bsc4I CCNNNNNNNGG 3 cut(s) 143, 680, 1465
Bse1I ACTGG 3 cut(s) 93, 251, 706
Bse21I CCTNAGG 1 cut(s) 467
Bse3DI GCAATG 1 cut(s) 1382
BseBI CCWGG 2 cut(s) 822, 1389
BseCI ATCGAT 1 cut(s) 1023
BseDI CCNNGG 8 cut(s) 170, 214, 273, 460, 674, 915, 1313, 1314
BseGI GGATG 2 cut(s) 1018, 1069
BseLI CCNNNNNNNGG 3 cut(s) 143, 680, 1465
BseMI GCAATG 1 cut(s) 1382
BseMII CTCAG 4 cut(s) 221, 296, 912, 1413
BseNI ACTGG 3 cut(s) 93, 251, 706
BseRI GAGGAG 2 cut(s) 779, 1067
BseSI GKGCMC 1 cut(s) 1368
BseXI GCAGC 4 cut(s) 265, 330, 415, 1439
BseYI CCCAGC 2 cut(s) 643, 878
Bsh1236I CGCG 3 cut(s) 380, 462, 1178
BshFI GGCC 6 cut(s) 219, 325, 374, 465, 914, 1469
BshVI ATCGAT 1 cut(s) 1023
BsiHKAI GWGCWC 2 cut(s) 440, 1368
BsiHKCI CYCGRG 4 cut(s) 272, 326, 568, 1313
BsiSI CCGG 1 cut(s) 1314
BslFI GGGAC 4 cut(s) 233, 548, 677, 1296
BslI CCNNNNNNNGG 3 cut(s) 143, 680, 1465
BsmAI GTCTC 7 cut(s) 169, 180, 210, 268, 273, 343, 1049
BsmBI CGTCTC 3 cut(s) 268, 273, 343
BsmFI GGGAC 4 cut(s) 233, 548, 677, 1296
BsmI GAATGC 2 cut(s) 1168, 1243
BsnI GGCC 6 cut(s) 219, 325, 374, 465, 914, 1469
Bso31I GGTCTC 1 cut(s) 180
BsoBI CYCGRG 4 cut(s) 272, 326, 568, 1313
Bsp1286I GDGCHC 2 cut(s) 440, 1368
Bsp143I GATC 7 cut(s) 288, 492, 974, 1020, 1047, 1183, 1408
Bsp19I CCATGG 3 cut(s) 214, 674, 915
Bsp68I TCGCGA 1 cut(s) 1178
BspACI CCGC 7 cut(s) 5, 87, 179, 378, 460, 462, 1076
BspANI GGCC 6 cut(s) 219, 325, 374, 465, 914, 1469
BspCNI CTCAG 4 cut(s) 220, 295, 913, 1414
BspDI ATCGAT 1 cut(s) 1023
BspFNI CGCG 3 cut(s) 380, 462, 1178
BspHI TCATGA 2 cut(s) 291, 945
BspLI GGNNCC 2 cut(s) 199, 1185
BspPI GGATC 3 cut(s) 982, 1178, 1191
BspQI GCTCTTC 2 cut(s) 404, 581
BspTI CTTAAG 1 cut(s) 1463
BspTNI GGTCTC 1 cut(s) 180
BsrDI GCAATG 1 cut(s) 1382
BsrI ACTGG 3 cut(s) 93, 251, 706
BssECI CCNNGG 8 cut(s) 170, 214, 273, 460, 674, 915, 1313, 1314
BssMI GATC 7 cut(s) 288, 492, 974, 1020, 1047, 1183, 1408
BssSI CACGAG 1 cut(s) 1367
BssT1I CCWWGG 3 cut(s) 214, 674, 915
Bst2BI CACGAG 1 cut(s) 1367
Bst2UI CCWGG 2 cut(s) 822, 1389
Bst4CI ACNGT 5 cut(s) 174, 337, 599, 738, 1441
Bst6I CTCTTC 5 cut(s) 404, 468, 581, 1065, 1206
BstAFI CTTAAG 1 cut(s) 1463
BstC8I GCNNGC 3 cut(s) 323, 1067, 1297
BstDEI CTNAG 6 cut(s) 207, 282, 467, 921, 1095, 1422
BstDSI CCRYGG 5 cut(s) 170, 214, 460, 674, 915
BstF5I GGATG 2 cut(s) 1018, 1069
BstFNI CGCG 3 cut(s) 380, 462, 1178
BstHHI GCGC 1 cut(s) 382
BstKTI GATC 7 cut(s) 291, 495, 977, 1023, 1050, 1186, 1411
BstMAI GTCTC 7 cut(s) 169, 180, 210, 268, 273, 343, 1049
BstMBI GATC 7 cut(s) 288, 492, 974, 1020, 1047, 1183, 1408
BstMWI GCNNNNNNNGC 2 cut(s) 284, 1075
BstNI CCWGG 2 cut(s) 822, 1389
BstNSI RCATGY 1 cut(s) 1420
BstSCI CCNGG 4 cut(s) 820, 1312, 1313, 1387
BstSFI CTRYAG 1 cut(s) 595
BstSLI GKGCMC 1 cut(s) 1368
BstUI CGCG 3 cut(s) 380, 462, 1178
BstV1I GCAGC 4 cut(s) 265, 330, 415, 1439
BstV2I GAAGAC 3 cut(s) 69, 999, 1461
BstX2I RGATCY 2 cut(s) 1183, 1408
BstXI CCANNNNNNTGG 1 cut(s) 898
BstYI RGATCY 2 cut(s) 1183, 1408
Bsu15I ATCGAT 1 cut(s) 1023
Bsu36I CCTNAGG 1 cut(s) 467
BsuRI GGCC 6 cut(s) 219, 325, 374, 465, 914, 1469
BsuTUI ATCGAT 1 cut(s) 1023
BtgI CCRYGG 5 cut(s) 170, 214, 460, 674, 915
BtgZI GCGATG 1 cut(s) 170
BtrI CACGTC 1 cut(s) 712
BtsCI GGATG 2 cut(s) 1018, 1069
BtsI GCAGTG 1 cut(s) 1050
BtsIMutI CAGTG 3 cut(s) 604, 699, 1050
BtuMI TCGCGA 1 cut(s) 1178
Cac8I GCNNGC 3 cut(s) 323, 1067, 1297
CciI TCATGA 2 cut(s) 291, 945
CfoI GCGC 1 cut(s) 382
Cfr13I GGNCC 4 cut(s) 211, 218, 324, 912
Cfr42I CCGCGG 1 cut(s) 463
Cfr9I CCCGGG 1 cut(s) 1313
ClaI ATCGAT 1 cut(s) 1023
CseI GACGC 2 cut(s) 235, 556
Csp6I GTAC 2 cut(s) 1329, 1437
CspCI CAANNNNNGTGG 2 cut(s) 351, 386
CviQI GTAC 2 cut(s) 1329, 1437
DdeI CTNAG 6 cut(s) 207, 282, 467, 921, 1095, 1422
DpnI GATC 7 cut(s) 290, 494, 976, 1022, 1049, 1185, 1410
DpnII GATC 7 cut(s) 288, 492, 974, 1020, 1047, 1183, 1408
DraI TTTAAA 1 cut(s) 613
EaeI YGGCCR 1 cut(s) 372
Eam1104I CTCTTC 5 cut(s) 404, 468, 581, 1065, 1206
EarI CTCTTC 5 cut(s) 404, 468, 581, 1065, 1206
EciI GGCGGA 2 cut(s) 20, 168
Eco130I CCWWGG 3 cut(s) 214, 674, 915
Eco31I GGTCTC 1 cut(s) 180
Eco32I GATATC 1 cut(s) 1101
Eco47I GGWCC 1 cut(s) 211
Eco57I CTGAAG 2 cut(s) 428, 1011
Eco81I CCTNAGG 1 cut(s) 467
Eco88I CYCGRG 4 cut(s) 272, 326, 568, 1313
EcoRII CCWGG 2 cut(s) 820, 1387
EcoRV GATATC 1 cut(s) 1101
EcoT14I CCWWGG 3 cut(s) 214, 674, 915
ErhI CCWWGG 3 cut(s) 214, 674, 915
Esp3I CGTCTC 3 cut(s) 268, 273, 343
FalI AAGNNNNNCTT 2 cut(s) 1446, 1478
FaqI GGGAC 4 cut(s) 233, 548, 677, 1296
FauNDI CATATG 1 cut(s) 416
FbaI TGATCA 1 cut(s) 492
Fnu4HI GCNGC 5 cut(s) 279, 319, 404, 463, 1428
FokI GGATG 2 cut(s) 1025, 1056
Fsp4HI GCNGC 5 cut(s) 279, 319, 404, 463, 1428
FspBI CTAG 6 cut(s) 581, 719, 905, 1352, 1412, 1431
GlaI GCGC 1 cut(s) 381
GluI GCNGC 5 cut(s) 279, 319, 404, 463, 1428
GsaI CCCAGC 2 cut(s) 647, 882
GsuI CTGGAG 1 cut(s) 325
HaeIII GGCC 6 cut(s) 219, 325, 374, 465, 914, 1469
HapII CCGG 1 cut(s) 1314
HgaI GACGC 2 cut(s) 235, 556
HhaI GCGC 1 cut(s) 382
Hin6I GCGC 1 cut(s) 380
HinP1I GCGC 1 cut(s) 380
HincII GTYRAC 1 cut(s) 886
HindII GTYRAC 1 cut(s) 886
HindIII AAGCTT 1 cut(s) 347
HinfI GANTC 6 cut(s) 329, 427, 509, 802, 1057, 1282
HpaII CCGG 1 cut(s) 1314
HphI GGTGA 3 cut(s) 105, 146, 159
Hpy166II GTNNAC 4 cut(s) 333, 886, 1201, 1366
Hpy188I TCNGA 5 cut(s) 146, 242, 807, 1292, 1423
Hpy8I GTNNAC 4 cut(s) 333, 886, 1201, 1366
Hpy99I CGWCG 2 cut(s) 263, 640
HpyAV CCTTC 3 cut(s) 129, 161, 802
HpyCH4III ACNGT 5 cut(s) 174, 337, 599, 738, 1441
HpyCH4IV ACGT 3 cut(s) 311, 638, 711
HpyCH4V TGCA 5 cut(s) 229, 958, 1030, 1069, 1366
HpyF10VI GCNNNNNNNGC 2 cut(s) 284, 1075
HpyF3I CTNAG 6 cut(s) 207, 282, 467, 921, 1095, 1422
HpySE526I ACGT 3 cut(s) 311, 638, 711
HspAI GCGC 1 cut(s) 380
Ksp22I TGATCA 1 cut(s) 492
KspI CCGCGG 1 cut(s) 463
Kzo9I GATC 7 cut(s) 288, 492, 974, 1020, 1047, 1183, 1408
LguI GCTCTTC 2 cut(s) 404, 581
LmnI GCTCC 3 cut(s) 7, 197, 1292
Lsp1109I GCAGC 4 cut(s) 265, 330, 415, 1439
LweI GCATC 1 cut(s) 1078
MaeI CTAG 6 cut(s) 581, 719, 905, 1352, 1412, 1431
MaeII ACGT 3 cut(s) 311, 638, 711
MaeIII GTNAC 3 cut(s) 697, 1127, 1396
MalI GATC 7 cut(s) 290, 494, 976, 1022, 1049, 1185, 1410
MboI GATC 7 cut(s) 288, 492, 974, 1020, 1047, 1183, 1408
MflI RGATCY 2 cut(s) 1183, 1408
MhlI GDGCHC 2 cut(s) 440, 1368
MlsI TGGCCA 1 cut(s) 374
MluCI AATT 4 cut(s) 526, 840, 953, 1357
MluNI TGGCCA 1 cut(s) 374
MlyI GAGTC 2 cut(s) 338, 1051
Mox20I TGGCCA 1 cut(s) 374
MscI TGGCCA 1 cut(s) 374
MseI TTAA 6 cut(s) 612, 1004, 1137, 1338, 1464, 1495
MslI CAYNNNNRTG 4 cut(s) 542, 866, 896, 939
Msp20I TGGCCA 1 cut(s) 374
MspA1I CMGCKG 3 cut(s) 406, 462, 896
MspCI CTTAAG 1 cut(s) 1463
MspI CCGG 1 cut(s) 1314
MspR9I CCNGG 4 cut(s) 822, 1314, 1315, 1389
Mva1269I GAATGC 2 cut(s) 1168, 1243
MvaI CCWGG 2 cut(s) 822, 1389
MvnI CGCG 3 cut(s) 380, 462, 1178
MwoI GCNNNNNNNGC 2 cut(s) 284, 1075
NciI CCSGG 2 cut(s) 1314, 1315
NcoI CCATGG 3 cut(s) 214, 674, 915
NdeI CATATG 1 cut(s) 416
NdeII GATC 7 cut(s) 288, 492, 974, 1020, 1047, 1183, 1408
NlaIV GGNNCC 2 cut(s) 199, 1185
NmuCI GTSAC 1 cut(s) 697
NruI TCGCGA 1 cut(s) 1178
NspI RCATGY 1 cut(s) 1420
OliI CACNNNNGTG 2 cut(s) 896, 939
PaeR7I CTCGAG 1 cut(s) 568
PagI TCATGA 2 cut(s) 291, 945
PciI ACATGT 1 cut(s) 1416
PciSI GCTCTTC 2 cut(s) 404, 581
PctI GAATGC 2 cut(s) 1168, 1243
PfeI GAWTC 4 cut(s) 427, 509, 802, 1282
PflMI CCANNNNNTGG 1 cut(s) 680
PkrI GCNGC 5 cut(s) 280, 320, 405, 464, 1429
PleI GAGTC 2 cut(s) 337, 1051
PpsI GAGTC 2 cut(s) 337, 1051
PscI ACATGT 1 cut(s) 1416
PsiI TTATAA 1 cut(s) 1260
Psp6I CCWGG 2 cut(s) 820, 1387
PspFI CCCAGC 2 cut(s) 643, 878
PspGI CCWGG 2 cut(s) 820, 1387
PspN4I GGNNCC 2 cut(s) 199, 1185
PspPI GGNCC 4 cut(s) 211, 218, 324, 912
PsuI RGATCY 2 cut(s) 1183, 1408
PvuII CAGCTG 2 cut(s) 406, 896
RruI TCGCGA 1 cut(s) 1178
RsaI GTAC 2 cut(s) 1330, 1438
RsaNI GTAC 2 cut(s) 1329, 1437
RseI CAYNNNNRTG 4 cut(s) 542, 866, 896, 939
SacII CCGCGG 1 cut(s) 463
SapI GCTCTTC 2 cut(s) 404, 581
SaqAI TTAA 6 cut(s) 612, 1004, 1137, 1338, 1464, 1495
SatI GCNGC 5 cut(s) 279, 319, 404, 463, 1428
Sau3AI GATC 7 cut(s) 288, 492, 974, 1020, 1047, 1183, 1408
Sau96I GGNCC 4 cut(s) 211, 218, 324, 912
SchI GAGTC 2 cut(s) 338, 1051
ScrFI CCNGG 4 cut(s) 822, 1314, 1315, 1389
SduI GDGCHC 2 cut(s) 440, 1368
SfaNI GCATC 1 cut(s) 1078
SfcI CTRYAG 1 cut(s) 595
Sfr274I CTCGAG 1 cut(s) 568
Sfr303I CCGCGG 1 cut(s) 463
SgrBI CCGCGG 1 cut(s) 463
SinI GGWCC 1 cut(s) 211
SlaI CTCGAG 1 cut(s) 568
SmaI CCCGGG 1 cut(s) 1315
SmiMI CAYNNNNRTG 4 cut(s) 542, 866, 896, 939
SmlI CTYRAG 4 cut(s) 568, 797, 1036, 1463
SmoI CTYRAG 4 cut(s) 568, 797, 1036, 1463
Sse9I AATT 4 cut(s) 526, 840, 953, 1357
SsiI CCGC 7 cut(s) 5, 87, 179, 378, 460, 462, 1076
SspMI CTAG 6 cut(s) 581, 719, 905, 1352, 1412, 1431
StyD4I CCNGG 4 cut(s) 820, 1312, 1313, 1387
StyI CCWWGG 3 cut(s) 214, 674, 915
TaaI ACNGT 5 cut(s) 174, 337, 599, 738, 1441
TaiI ACGT 3 cut(s) 314, 641, 714
TaqI TCGA 6 cut(s) 103, 569, 753, 1023, 1050, 1218
TaqII GACCGA 1 cut(s) 441
TasI AATT 4 cut(s) 526, 840, 953, 1357
TauI GCSGC 1 cut(s) 465
TfiI GAWTC 4 cut(s) 427, 509, 802, 1282
Tru1I TTAA 6 cut(s) 612, 1004, 1137, 1338, 1464, 1495
Tru9I TTAA 6 cut(s) 612, 1004, 1137, 1338, 1464, 1495
TscAI CASTG 3 cut(s) 604, 706, 1050
TseFI GTSAC 1 cut(s) 697
TseI GCWGC 4 cut(s) 278, 318, 403, 1427
Tsp45I GTSAC 1 cut(s) 697
TspDTI ATGAA 7 cut(s) 36, 46, 308, 440, 978, 1436, 1476
TspGWI ACGGA 1 cut(s) 1275
TspMI CCCGGG 1 cut(s) 1313
TspRI CASTG 3 cut(s) 604, 706, 1050
Van91I CCANNNNNTGG 1 cut(s) 680
Vha464I CTTAAG 1 cut(s) 1463
VneI GTGCAC 1 cut(s) 1364
VpaK11BI GGWCC 1 cut(s) 211
XapI RAATTY 2 cut(s) 526, 1357
XbaI TCTAGA 2 cut(s) 904, 1411
XceI RCATGY 1 cut(s) 1420
XcmI CCANNNNNNNNNTGG 1 cut(s) 681
XhoI CTCGAG 1 cut(s) 568
XmaI CCCGGG 1 cut(s) 1313
XspI CTAG 6 cut(s) 581, 719, 905, 1352, 1412, 1431
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.