Rh7BG125800

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
Physical Location & Seq
Reverse (-)
9340230 .. 9342834
2605 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG125800.1

Sequence Viewer

Length: 1527 bp
ATGCTCGAGCTGAGTGAAACCTTGTCAGTAGTACTGCTTCTAGCCATTACCCTCATCTTCATATACAAATGGTTCTCCACTAGTACAAAAAACTCGCCACCTTCTCCACCAAAACTCCCTATCCTCGGAAACTTTCACCAACTAGGGTTACGCCCTCATCGCTCACTTCGAGCCTTAGCTCAGATCCATGGCCCCTTCATGCTCCTCCACTTTGGAAGTGTCCCCTTCCTTATCGTCTCCTCGGCTGAGGGAGCCCGCGAGATCATGAAAACCCATGACCTCACTTTCTCCAACAGACCCAAGACGGTCATCTTTGAGAAGCTGCTCTACAATTTCAGAGACGTAGCGTCGGCGCCTTATGGTGAGTACTGGAGACAGATGAAGAGTATATGTGTTTTGAATCTTCTGAGCAACAAAAGGGTTCGCTCTTTTCGCTCTGTTAGAGAAGAGGAAACAAAATCGATGATCGACAAGATAAAGGAATCATCATCAACATCATCGGTTTTAAACTTAAGTGAAATGTTTGCTACGCTGACTAATGATGTCATCAGTAGAGTTGCTCTGGGTAGGAAGTATGATAGTACTGATGGGGAAGGTTTGAGAGTGCTTTTAGGGGAGTTTCAGGAGTTATTGGGACGCATCAACGTTGGGGATTTTATCCCATGGCTTGCTTGGTTGAACCGTGTGAATGGTTTGGAGGCTAAATCGGACAAGGTGGCTACAGGGTTTGATGATTTTTTGGAGAGAGTGATTCAAGAGCATGTAGATAGTTATGAGAGGGGAAATAATGATGGACATGATCGTATTGAGAATGAGGACCAAAAGGATTTTGTGGACGTTTTACTGGAAATTCAGAAAGGAAACTCACTTGGCTTTCCCCTCGAAAGAGTTAGCGTAAAGGCACTTATCTTGGATATGTTTTCTGCCGGAACTGATACCACATATACAGTCCTGGAATGGGCAATGAGTGAGCTTTTAAGGCATCCGATGGTCATGAACAAACTGCAGAAAGAGATTCGAGGAATAGTCAGAGACAAGAAAGACATGACGGAGGATGATTTGACCGGAATGCACTACTTGAAGGCAGTGATCAAGGAGACTCTTCGCTTGCATCCTCCAGTTCCGTTGCTAGTGCCCAGGTTATCAACCCACGAAGTGAAAATAAATGGTTACAGCATTAAAGGCAACACACGAGTTCTAGTGAATGCATGGCACATTGGAAGAGACCCCGAGTCATACAGCAATCCAGAGGAGTTTGAGCCAGAAAGGTTCTTGATCCACAACGATATAGATTACAAAGGAAATGACTTCCAACTCATTCCATTTGGAGCTGGTAGAAGGATTTGCCCAGGTATTCAATTTGCCACTGCTGTTAATGAGATTGCTTTGGCAAACATATTGCACAAGTTCAATTGGAAATTGCCTAATGGAGCAAAAGGCGAAGATTTGGACATGACGGAATCTACTGGTATAACCATACATAGGAAATATCCTCTTAAAGTCGTTGCTGTTCCATATTTTCATTGA

Protein Analysis

508

Amino Acids

57.82

Weight (kDa)

6.78

Isoelectric Point (pI)

36.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 33 - 494 5.4e-104 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000061)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G48270 AT3G48280 AT3G48290 AT3G48290 AT3G48300 AT3G48300 AT3G48310 AT3G48320 AT4G20235 AT4G20235
fragaria_vesca FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g36190 FvH4_3g14160 FvH4_3g14210 FvH4_3g14260 FvH4_3g14260 FvH4_3g21100 FvH4_3g21380 FvH4_4g24460 FvH4_4g24500 FvH4_5g06571 FvH4_5g06571 FvH4_5g06571 FvH4_5g06571 FvH4_5g06572 FvH4_5g06573 FvH4_5g06574 FvH4_5g06575 FvH4_5g06576 FvH4_5g06577 FvH4_5g06577 FvH4_5g07540 FvH4_5g07550 FvH4_5g07560 FvH4_5g07570 FvH4_5g29491 FvH4_5g29492 FvH4_6g23870 FvH4_6g23880 FvH4_6g26870 FvH4_7g11861 FvH4_7g11862 FvH4_7g13050 FvH4_7g13060 FvH4_7g13080 FvH4_7g13080 FvH4_7g22630 FvH4_7g22650 FvH4_7g22651 FvH4_7g23020
malus_domestica MD03G1207400.v1.1 MD03G1214800.v1.1 MD03G1218500.v1.1 MD06G1163100.v1.1 MD06G1163300.v1.1 MD06G1163400.v1.1 MD06G1163500.v1.1 MD06G1163600.v1.1 MD06G1163800.v1.1 MD06G1164000.v1.1 MD06G1164100.v1.1 MD06G1224400.v1.1 MD08G1222800.v1.1 MD08G1222900.v1.1 MD08G1223100.v1.1 MD11G1091500.v1.1 MD11G1091800.v1.1 MD14G1163200.v1.1 MD14G1169000.v1.1 MD15G1207200.v1.1 MD15G1207300.v1.1 MD17G1259400.v1.1
prunus_persica Prupe.4G198100_v2.0.a1 Prupe.4G199100_v2.0.a1 Prupe.4G199400_v2.0.a1 Prupe.4G199800_v2.0.a1 Prupe.4G225200_v2.0.a1 Prupe.4G239100_v2.0.a1 Prupe.5G156600_v2.0.a1 Prupe.5G163500_v2.0.a1 Prupe.7G209500_v2.0.a1 Prupe.I003400_v2.0.a1
pyrus_communis pycom03g16340 pycom06g14600 pycom06g14610 pycom06g14620 pycom06g14630 pycom06g14640 pycom06g14670 pycom06g14690 pycom08g19390 pycom08g19400 pycom08g19410 pycom11g07600 pycom11g07610 pycom11g07620 pycom11g07660 pycom14g13580 pycom14g14080 pycom14g14100 pycom14g14110 pycom15g18380 pycom17g26080
rosa_chinensis RchiOBHm_Chr1g0339441 RchiOBHm_Chr1g0339451 RchiOBHm_Chr1g0352191 RchiOBHm_Chr1g0368221 RchiOBHm_Chr2g0129531 RchiOBHm_Chr2g0129541 RchiOBHm_Chr3g0477631 RchiOBHm_Chr3g0482551 RchiOBHm_Chr3g0482561 RchiOBHm_Chr3g0482571 RchiOBHm_Chr4g0411601 RchiOBHm_Chr4g0422181 RchiOBHm_Chr5g0036661 RchiOBHm_Chr5g0036731 RchiOBHm_Chr6g0274021 RchiOBHm_Chr7g0190921 RchiOBHm_Chr7g0190931 RchiOBHm_Chr7g0190941 RchiOBHm_Chr7g0190951 RchiOBHm_Chr7g0190961 RchiOBHm_Chr7g0190971 RchiOBHm_Chr7g0191001 RchiOBHm_Chr7g0191011 RchiOBHm_Chr7g0191021 RchiOBHm_Chr7g0192181 RchiOBHm_Chr7g0192191 RchiOBHm_Chr7g0192201 RchiOBHm_Chr7g0192221 RchiOBHm_Chr7g0192231 RchiOBHm_Chr7g0192281 RchiOBHm_Chr7g0197311
rosa_laevigata RLG00000003942 RLG00000004345 RLG00000004379 RLG00000004383 RLG00000004384 RLG00000004385 RLG00000004387 RLG00000004388 RLG00000004389 RLG00000004480 RLG00000004481 RLG00000004482 RLG00000004483 RLG00000004485 RLG00000008342 RLG00000008401 RLG00000013583 RLG00000017044 RLG00000027229 RLG00000028349 RLG00000028350 RLG00000028353 RLG00000028820 RLG00000033707 RLG00000033710
rosa_multiflora Rmu_co8020340.1_g000001 Rmu_co8096640.1_g000001 Rmu_co8214930.1_g000001 Rmu_co8223272.1_g000001 Rmu_co8282535.1_g000001 Rmu_co8343567.1_g000001 Rmu_co8404191.1_g000001 Rmu_co8455157.1_g000001 Rmu_sc0000062.1_g000028 Rmu_sc0000082.1_g000091 Rmu_sc0000509.1_g000017 Rmu_sc0000775.1_g000001 Rmu_sc0000999.1_g000034 Rmu_sc0001559.1_g000004 Rmu_sc0001559.1_g000009 Rmu_sc0002164.1_g000001 Rmu_sc0002164.1_g000005 Rmu_sc0002164.1_g000007 Rmu_sc0002164.1_g000008 Rmu_sc0002164.1_g000009 Rmu_sc0002164.1_g000019 Rmu_sc0002247.1_g000009 Rmu_sc0002373.1_g000002 Rmu_sc0002373.1_g000003 Rmu_sc0002944.1_g000059 Rmu_sc0003930.1_g000004 Rmu_sc0004958.1_g000001 Rmu_sc0005197.1_g000014 Rmu_sc0005898.1_g000008 Rmu_sc0005898.1_g000009 Rmu_sc0005898.1_g000015 Rmu_sc0006059.1_g000004 Rmu_sc0006059.1_g000010 Rmu_sc0006903.1_g000007 Rmu_sc0006903.1_g000008 Rmu_sc0006968.1_g000001 Rmu_sc0011009.1_g000009 Rmu_sc0022852.1_g000002 Rmu_sc0033854.1_g000001 Rmu_ssc0000421.1_g000057 Rmu_ssc0000421.1_g000067 Rmu_ssc0000421.1_g000069 Rmu_ssc0000421.1_g000072 Rmu_ssc0000421.1_g000081 Rmu_ssc0000421.1_g000086
rosa_roxburghii Rroxscaffold_158G00443680 Rroxscaffold_158G00443710 Rroxscaffold_158G00443720 Rroxscaffold_158G00443740 Rroxscaffold_1G00034950 Rroxscaffold_1G00044240 Rroxscaffold_1G00044270 Rroxscaffold_3G00241380 Rroxscaffold_3G00247000 Rroxscaffold_3G00263120 Rroxscaffold_3G00263150 Rroxscaffold_3G00263160 Rroxscaffold_3G00263170 Rroxscaffold_3G00263180 Rroxscaffold_3G00263190 Rroxscaffold_3G00263210 Rroxscaffold_3G00263230 Rroxscaffold_3G00263260 Rroxscaffold_3G00264110 Rroxscaffold_3G00264130 Rroxscaffold_3G00264160 Rroxscaffold_3G00264180 Rroxscaffold_3G00264200 Rroxscaffold_4G00288750 Rroxscaffold_4G00303110 Rroxscaffold_4G00303120 Rroxscaffold_4G00322280 Rroxscaffold_5G00356200 Rroxscaffold_6G00399150 Rroxscaffold_6G00399290 Rroxscaffold_7G00194770
rosa_rugosa Rorug01G0225300 Rorug01G0225400 Rorug01G0225800 Rorug01G0226000 Rorug01G0339400 Rorug01G0451500 Rorug03G0196900 Rorug03G0294900 Rorug04G0107500 Rorug04G0107600 Rorug04G0129700 Rorug04G0178000 Rorug05G0144900.1 Rorug05G0145000 Rorug05G0228000 Rorug05G0228600 Rorug06G0078300 Rorug06G0508000 Rorug06G0508100 Rorug06G0508100 Rorug06G0508400 Rorug06G0513400 Rorug07G0000100 Rorug07G0000200 Rorug07G0000300 Rorug07G0000500 Rorug07G0000800
rosa_samantha Rh1BG060400 Rh1BG210300 Rh1BG210700 Rh1BG210800 Rh1BG309800 Rh1CG223800 Rh1CG224200 Rh1CG325200 Rh1DG237000 Rh1DG237400 Rh1DG341600 Rh2DG365700 Rh3AG212500 Rh3AG248400 Rh3CG239800 Rh3DG239300 Rh4AG169300 Rh4BG166200 Rh4BG240500 Rh4BG240600 Rh4DG163600 Rh5AG249600 Rh5AG249900 Rh5AG250000 Rh5CG283100 Rh5CG283200 Rh5CG283400 Rh5DG259200 Rh5DG259800 Rh6BG197700 Rh6CG197800 Rh6DG189400 Rh7AG114900 Rh7AG115000 Rh7AG115200 Rh7AG115300 Rh7AG115400 Rh7AG115500 Rh7AG123900 Rh7AG124100 Rh7AG124300 Rh7BG117200 Rh7BG117400 Rh7BG118400 Rh7BG125400 Rh7BG125600 Rh7BG125700 Rh7BG125800 Rh7BG125900 Rh7BG126000 Rh7BG126400 Rh7BG126600 Rh7BG126700 Rh7BG166200 Rh7DG118600 Rh7DG118700 Rh7DG118900 Rh7DG119000 Rh7DG119100 Rh7DG127400 Rh7DG127600 Rh7DG127700 Rh7DG127900 Rh7DG128200
rosa_wichuraiana Rw1G013270 Rw1G020790 Rw2G027890 Rw2G028040 Rw3G019240 Rw4G014070 Rw4G020540 Rw5G021320 Rw5G022970 Rw6G016920 Rw7G010020 Rw7G010040 Rw7G010580 Rw7G010590 Rw7G010600 Rw7G010610 Rw7G010620 Rw7G010630 Rw7G010640 Rw7G010690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 352
AccII CGCG 1 cut(s) 258
AciI CCGC 1 cut(s) 256
AclI AACGTT 1 cut(s) 645
AclWI GGATC 2 cut(s) 178, 1270
AcsI RAATTY 1 cut(s) 849
AcyI GRCGYC 1 cut(s) 353
AdeI CACNNNGTG 1 cut(s) 1156
AfaI GTAC 4 cut(s) 33, 85, 368, 583
AfiI CCNNNNNNNGG 3 cut(s) 125, 958, 1482
AflII CTTAAG 1 cut(s) 511
AgsI TTSAA 6 cut(s) 400, 679, 755, 1081, 1358, 1411
AhdI GACNNNNNGTC 2 cut(s) 346, 1231
AhlI ACTAGT 1 cut(s) 80
AjnI CCWGG 3 cut(s) 951, 1136, 1348
AluBI AGCT 5 cut(s) 10, 179, 322, 973, 1331
AluI AGCT 5 cut(s) 10, 179, 322, 973, 1331
Alw26I GTCTC 6 cut(s) 241, 333, 367, 1026, 1091, 1218
AlwI GGATC 2 cut(s) 178, 1270
Ama87I CYCGRG 2 cut(s) 5, 1229
AoxI GGCC 1 cut(s) 190
ApeKI GCWGC 1 cut(s) 322
ApoI RAATTY 1 cut(s) 849
AspLEI GCGC 1 cut(s) 355
AspS9I GGNCC 2 cut(s) 191, 817
AsuHPI GGTGA 2 cut(s) 128, 374
AvaI CYCGRG 2 cut(s) 5, 1229
AvaII GGWCC 1 cut(s) 817
BaeGI GKGCMC 1 cut(s) 1137
BanI GGYRCC 1 cut(s) 352
BanII GRGCYC 1 cut(s) 256
BarI GAAGNNNNNNTAC 4 cut(s) 21, 53, 311, 343
BauI CACGAG 1 cut(s) 1191
BbvCI CCTCAGC 1 cut(s) 246
BbvI GCAGC 1 cut(s) 309
BccI CCATC 3 cut(s) 581, 785, 982
BciT130I CCWGG 3 cut(s) 953, 1138, 1350
BclI TGATCA 1 cut(s) 1089
BcoDI GTCTC 6 cut(s) 241, 333, 367, 1026, 1091, 1218
BcuI ACTAGT 1 cut(s) 80
BfaI CTAG 5 cut(s) 41, 81, 143, 1130, 1199
BfmI CTRYAG 2 cut(s) 720, 1004
BfoI RGCGCY 1 cut(s) 356
BfrI CTTAAG 1 cut(s) 511
BisI GCNGC 1 cut(s) 323
BlsI GCNGC 1 cut(s) 324
BmcAI AGTACT 3 cut(s) 33, 368, 583
Bme1390I CCNGG 3 cut(s) 953, 1138, 1350
Bme18I GGWCC 1 cut(s) 817
BmeRI GACNNNNNGTC 2 cut(s) 346, 1231
BmeT110I CYCGRG 2 cut(s) 5, 1229
BmgT120I GGNCC 2 cut(s) 191, 817
BmiI GGNNCC 3 cut(s) 193, 253, 354
BmrFI CCNGG 3 cut(s) 953, 1138, 1350
BmsI GCATC 3 cut(s) 648, 991, 1120
BpmI CTGGAG 2 cut(s) 391, 1101
Bpu10I CCTNAGC 2 cut(s) 175, 246
Bsa29I ATCGAT 1 cut(s) 461
BsaHI GRCGYC 1 cut(s) 353
BsaI GGTCTC 1 cut(s) 1218
BsaJI CCNNGG 6 cut(s) 124, 187, 240, 662, 1136, 1348
BsaWI WCCGGW 1 cut(s) 1064
BsaXI ACNNNNNCTCC 2 cut(s) 99, 129
Bsc4I CCNNNNNNNGG 3 cut(s) 125, 958, 1482
Bse1I ACTGG 4 cut(s) 374, 849, 1118, 1471
Bse3DI GCAATG 1 cut(s) 969
BseBI CCWGG 3 cut(s) 953, 1138, 1350
BseCI ATCGAT 1 cut(s) 461
BseDI CCNNGG 6 cut(s) 124, 187, 240, 662, 1136, 1348
BseGI GGATG 3 cut(s) 982, 1060, 1111
BseLI CCNNNNNNNGG 3 cut(s) 125, 958, 1482
BseMI GCAATG 1 cut(s) 969
BseMII CTCAG 3 cut(s) 194, 237, 398
BseNI ACTGG 4 cut(s) 374, 849, 1118, 1471
BseRI GAGGAG 3 cut(s) 194, 229, 1265
BseSI GKGCMC 1 cut(s) 1137
BseXI GCAGC 1 cut(s) 309
Bsh1236I CGCG 1 cut(s) 258
BshFI GGCC 1 cut(s) 192
BshNI GGYRCC 1 cut(s) 352
BshVI ATCGAT 1 cut(s) 461
BsiHKCI CYCGRG 2 cut(s) 5, 1229
BsiSI CCGG 2 cut(s) 927, 1065
BslFI GGGAC 2 cut(s) 206, 648
BslI CCNNNNNNNGG 3 cut(s) 125, 958, 1482
BsmAI GTCTC 6 cut(s) 241, 333, 367, 1026, 1091, 1218
BsmBI CGTCTC 2 cut(s) 241, 333
BsmFI GGGAC 2 cut(s) 206, 648
BsmI GAATGC 2 cut(s) 1074, 1210
BsnI GGCC 1 cut(s) 192
Bso31I GGTCTC 1 cut(s) 1218
BsoBI CYCGRG 2 cut(s) 5, 1229
Bsp1286I GDGCHC 2 cut(s) 256, 1137
Bsp143I GATC 6 cut(s) 183, 261, 465, 799, 1089, 1275
Bsp19I CCATGG 2 cut(s) 187, 662
BspACI CCGC 1 cut(s) 256
BspANI GGCC 1 cut(s) 192
BspCNI CTCAG 3 cut(s) 193, 238, 399
BspDI ATCGAT 1 cut(s) 461
BspFNI CGCG 1 cut(s) 258
BspHI TCATGA 2 cut(s) 264, 993
BspLI GGNNCC 3 cut(s) 193, 253, 354
BspMAI CTGCAG 1 cut(s) 1008
BspPI GGATC 2 cut(s) 178, 1270
BspT107I GGYRCC 1 cut(s) 352
BspTI CTTAAG 1 cut(s) 511
BspTNI GGTCTC 1 cut(s) 1218
BsrDI GCAATG 1 cut(s) 969
BsrI ACTGG 4 cut(s) 374, 849, 1118, 1471
BssECI CCNNGG 6 cut(s) 124, 187, 240, 662, 1136, 1348
BssMI GATC 6 cut(s) 183, 261, 465, 799, 1089, 1275
BssNI GRCGYC 1 cut(s) 353
BssSI CACGAG 1 cut(s) 1191
BssT1I CCWWGG 2 cut(s) 187, 662
Bst2BI CACGAG 1 cut(s) 1191
Bst2UI CCWGG 3 cut(s) 953, 1138, 1350
Bst4CI ACNGT 3 cut(s) 307, 683, 949
Bst6I CTCTTC 4 cut(s) 377, 441, 1107, 1216
BstACI GRCGYC 1 cut(s) 353
BstAFI CTTAAG 1 cut(s) 511
BstC8I GCNNGC 3 cut(s) 256, 669, 1109
BstDEI CTNAG 5 cut(s) 11, 175, 180, 246, 407
BstDSI CCRYGG 2 cut(s) 187, 662
BstF5I GGATG 3 cut(s) 982, 1060, 1111
BstFNI CGCG 1 cut(s) 258
BstH2I RGCGCY 1 cut(s) 356
BstHHI GCGC 1 cut(s) 355
BstKTI GATC 6 cut(s) 186, 264, 468, 802, 1092, 1278
BstMAI GTCTC 6 cut(s) 241, 333, 367, 1026, 1091, 1218
BstMBI GATC 6 cut(s) 183, 261, 465, 799, 1089, 1275
BstMWI GCNNNNNNNGC 5 cut(s) 159, 251, 432, 979, 1182
BstNI CCWGG 3 cut(s) 953, 1138, 1350
BstNSI RCATGY 1 cut(s) 764
BstSCI CCNGG 3 cut(s) 951, 1136, 1348
BstSFI CTRYAG 2 cut(s) 720, 1004
BstSLI GKGCMC 1 cut(s) 1137
BstUI CGCG 1 cut(s) 258
BstV1I GCAGC 1 cut(s) 309
BstX2I RGATCY 1 cut(s) 183
BstYI RGATCY 1 cut(s) 183
Bsu15I ATCGAT 1 cut(s) 461
BsuRI GGCC 1 cut(s) 192
BsuTUI ATCGAT 1 cut(s) 461
BtgI CCRYGG 2 cut(s) 187, 662
BtgZI GCGATG 1 cut(s) 143
BtsCI GGATG 3 cut(s) 982, 1060, 1111
BtsI GCAGTG 2 cut(s) 1092, 1365
BtsIMutI CAGTG 2 cut(s) 1092, 1365
Cac8I GCNNGC 3 cut(s) 256, 669, 1109
CciI TCATGA 2 cut(s) 264, 993
CfoI GCGC 1 cut(s) 355
Cfr13I GGNCC 2 cut(s) 191, 817
ClaI ATCGAT 1 cut(s) 461
CseI GACGC 2 cut(s) 336, 645
Csp6I GTAC 4 cut(s) 32, 84, 367, 582
CviQI GTAC 4 cut(s) 32, 84, 367, 582
DdeI CTNAG 5 cut(s) 11, 175, 180, 246, 407
DinI GGCGCC 1 cut(s) 354
DpnI GATC 6 cut(s) 185, 263, 467, 801, 1091, 1277
DpnII GATC 6 cut(s) 183, 261, 465, 799, 1089, 1275
DraI TTTAAA 1 cut(s) 507
DraIII CACNNNGTG 1 cut(s) 1156
DriI GACNNNNNGTC 2 cut(s) 346, 1231
Eam1104I CTCTTC 4 cut(s) 377, 441, 1107, 1216
Eam1105I GACNNNNNGTC 2 cut(s) 346, 1231
EarI CTCTTC 4 cut(s) 377, 441, 1107, 1216
Eco130I CCWWGG 2 cut(s) 187, 662
Eco24I GRGCYC 1 cut(s) 256
Eco31I GGTCTC 1 cut(s) 1218
Eco47I GGWCC 1 cut(s) 817
Eco88I CYCGRG 2 cut(s) 5, 1229
EcoRII CCWGG 3 cut(s) 951, 1136, 1348
EcoT14I CCWWGG 2 cut(s) 187, 662
EcoT22I ATGCAT 1 cut(s) 1210
EcoT38I GRGCYC 1 cut(s) 256
EgeI GGCGCC 1 cut(s) 354
EheI GGCGCC 1 cut(s) 354
ErhI CCWWGG 2 cut(s) 187, 662
Esp3I CGTCTC 2 cut(s) 241, 333
FaqI GGGAC 2 cut(s) 206, 648
FauI CCCGC 1 cut(s) 263
FbaI TGATCA 1 cut(s) 1089
Fnu4HI GCNGC 1 cut(s) 323
FokI GGATG 3 cut(s) 969, 1067, 1098
FriOI GRGCYC 1 cut(s) 256
Fsp4HI GCNGC 1 cut(s) 323
FspBI CTAG 5 cut(s) 41, 81, 143, 1130, 1199
GlaI GCGC 1 cut(s) 354
GluI GCNGC 1 cut(s) 323
GsuI CTGGAG 2 cut(s) 391, 1101
HaeII RGCGCY 1 cut(s) 356
HaeIII GGCC 1 cut(s) 192
HapII CCGG 2 cut(s) 927, 1065
HgaI GACGC 2 cut(s) 336, 645
HhaI GCGC 1 cut(s) 355
Hin1I GRCGYC 1 cut(s) 353
Hin6I GCGC 1 cut(s) 353
HinP1I GCGC 1 cut(s) 353
HinfI GANTC 7 cut(s) 400, 482, 751, 1015, 1099, 1232, 1460
HpaII CCGG 2 cut(s) 927, 1065
HphI GGTGA 2 cut(s) 128, 374
Hpy166II GTNNAC 1 cut(s) 835
Hpy188I TCNGA 8 cut(s) 128, 183, 338, 408, 709, 855, 987, 1031
Hpy188III TCNNGA 6 cut(s) 265, 623, 755, 994, 1247, 1273
Hpy8I GTNNAC 1 cut(s) 835
Hpy99I CGWCG 1 cut(s) 352
HpyAV CCTTC 6 cut(s) 111, 205, 235, 587, 1075, 1332
HpyCH4III ACNGT 3 cut(s) 307, 683, 949
HpyCH4IV ACGT 3 cut(s) 342, 645, 837
HpyCH4V TGCA 5 cut(s) 1006, 1072, 1111, 1208, 1402
HpyF10VI GCNNNNNNNGC 5 cut(s) 159, 251, 432, 979, 1182
HpyF3I CTNAG 5 cut(s) 11, 175, 180, 246, 407
HpySE526I ACGT 3 cut(s) 342, 645, 837
Hsp92I GRCGYC 1 cut(s) 353
HspAI GCGC 1 cut(s) 353
KasI GGCGCC 1 cut(s) 352
Ksp22I TGATCA 1 cut(s) 1089
Kzo9I GATC 6 cut(s) 183, 261, 465, 799, 1089, 1275
LmnI GCTCC 4 cut(s) 207, 251, 1328, 1430
Lsp1109I GCAGC 1 cut(s) 309
LweI GCATC 3 cut(s) 648, 991, 1120
MaeI CTAG 5 cut(s) 41, 81, 143, 1130, 1199
MaeII ACGT 3 cut(s) 342, 645, 837
MaeIII GTNAC 2 cut(s) 147, 1169
MalI GATC 6 cut(s) 185, 263, 467, 801, 1091, 1277
MboI GATC 6 cut(s) 183, 261, 465, 799, 1089, 1275
MboII GAAGA 7 cut(s) 49, 394, 395, 458, 1094, 1233, 1454
MfeI CAATTG 1 cut(s) 1411
MflI RGATCY 1 cut(s) 183
MhlI GDGCHC 2 cut(s) 256, 1137
MluCI AATT 5 cut(s) 331, 849, 1358, 1411, 1418
Mly113I GGCGCC 1 cut(s) 353
MlyI GAGTC 2 cut(s) 1093, 1241
MmeI TCCRAC 2 cut(s) 315, 1336
Mph1103I ATGCAT 1 cut(s) 1210
MseI TTAA 6 cut(s) 506, 512, 977, 1179, 1374, 1497
MspCI CTTAAG 1 cut(s) 511
MspI CCGG 2 cut(s) 927, 1065
MspR9I CCNGG 3 cut(s) 953, 1138, 1350
MunI CAATTG 1 cut(s) 1411
Mva1269I GAATGC 2 cut(s) 1074, 1210
MvaI CCWGG 3 cut(s) 953, 1138, 1350
MvnI CGCG 1 cut(s) 258
MwoI GCNNNNNNNGC 5 cut(s) 159, 251, 432, 979, 1182
NarI GGCGCC 1 cut(s) 353
NcoI CCATGG 2 cut(s) 187, 662
NdeII GATC 6 cut(s) 183, 261, 465, 799, 1089, 1275
NlaIV GGNNCC 3 cut(s) 193, 253, 354
NmeAIII GCCGAG 1 cut(s) 221
NsiI ATGCAT 1 cut(s) 1210
NspI RCATGY 1 cut(s) 764
PaeR7I CTCGAG 1 cut(s) 5
PagI TCATGA 2 cut(s) 264, 993
PcsI WCGNNNNNNNCGW 1 cut(s) 166
PctI GAATGC 2 cut(s) 1074, 1210
PfeI GAWTC 5 cut(s) 400, 482, 751, 1015, 1460
PfoI TCCNGGA 1 cut(s) 951
PkrI GCNGC 1 cut(s) 324
PleI GAGTC 2 cut(s) 1093, 1240
PluTI GGCGCC 1 cut(s) 356
PpsI GAGTC 2 cut(s) 1093, 1240
Psp1406I AACGTT 1 cut(s) 645
Psp6I CCWGG 3 cut(s) 951, 1136, 1348
PspGI CCWGG 3 cut(s) 951, 1136, 1348
PspN4I GGNNCC 3 cut(s) 193, 253, 354
PspPI GGNCC 2 cut(s) 191, 817
PspXI VCTCGAGB 1 cut(s) 5
PstI CTGCAG 1 cut(s) 1008
PsuI RGATCY 1 cut(s) 183
RsaI GTAC 4 cut(s) 33, 85, 368, 583
RsaNI GTAC 4 cut(s) 32, 84, 367, 582
SaqAI TTAA 6 cut(s) 506, 512, 977, 1179, 1374, 1497
SatI GCNGC 1 cut(s) 323
Sau3AI GATC 6 cut(s) 183, 261, 465, 799, 1089, 1275
Sau96I GGNCC 2 cut(s) 191, 817
ScaI AGTACT 3 cut(s) 33, 368, 583
SchI GAGTC 2 cut(s) 1093, 1241
ScrFI CCNGG 3 cut(s) 953, 1138, 1350
SduI GDGCHC 2 cut(s) 256, 1137
SfaNI GCATC 3 cut(s) 648, 991, 1120
SfcI CTRYAG 2 cut(s) 720, 1004
SfoI GGCGCC 1 cut(s) 354
Sfr274I CTCGAG 1 cut(s) 5
SinI GGWCC 1 cut(s) 817
SlaI CTCGAG 1 cut(s) 5
SmlI CTYRAG 2 cut(s) 5, 511
SmoI CTYRAG 2 cut(s) 5, 511
SpeI ACTAGT 1 cut(s) 80
Sse9I AATT 5 cut(s) 331, 849, 1358, 1411, 1418
SsiI CCGC 1 cut(s) 256
SspDI GGCGCC 1 cut(s) 352
SspMI CTAG 5 cut(s) 41, 81, 143, 1130, 1199
StyD4I CCNGG 3 cut(s) 951, 1136, 1348
StyI CCWWGG 2 cut(s) 187, 662
TaaI ACNGT 3 cut(s) 307, 683, 949
TaiI ACGT 3 cut(s) 345, 648, 840
TaqI TCGA 6 cut(s) 6, 169, 461, 468, 882, 1018
TasI AATT 5 cut(s) 331, 849, 1358, 1411, 1418
TatI WGTACW 4 cut(s) 31, 83, 366, 581
TfiI GAWTC 5 cut(s) 400, 482, 751, 1015, 1460
Tru1I TTAA 6 cut(s) 506, 512, 977, 1179, 1374, 1497
Tru9I TTAA 6 cut(s) 506, 512, 977, 1179, 1374, 1497
TscAI CASTG 2 cut(s) 1092, 1372
TseI GCWGC 1 cut(s) 322
TspDTI ATGAA 6 cut(s) 49, 187, 281, 395, 1010, 1511
TspGWI ACGGA 3 cut(s) 1064, 1113, 1472
TspRI CASTG 2 cut(s) 1092, 1372
Vha464I CTTAAG 1 cut(s) 511
VpaK11BI GGWCC 1 cut(s) 817
XapI RAATTY 1 cut(s) 849
XceI RCATGY 1 cut(s) 764
XcmI CCANNNNNNNNNTGG 1 cut(s) 669
XhoI CTCGAG 1 cut(s) 5
XspI CTAG 5 cut(s) 41, 81, 143, 1130, 1199
ZrmI AGTACT 3 cut(s) 33, 368, 583
Zsp2I ATGCAT 1 cut(s) 1210
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.