Rh1DG237000

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1D
Physical Location & Seq
Forward (+)
45017420 .. 45029816
12397 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1DG237000.1

Sequence Viewer

Length: 1905 bp
ATGTCAAATCTCCTGCAAATTCTGGAACTAAAACTGAACGAAACCTCAATCTTCTGGCAACTCTTTTCGCCCAACTATGTACCACTTCTCGCCATTTTCCTTTTCCTCCTATACAGATGGTCTTCTCCTCATACTAACTCATCATCAGTTTCAGTACCACCATCTCCACCAAAGCTTCCTGTGATCGGAAACCTCCACCGGCTAGGGTTACTCCCTCACCGCTCTCTTCAAACTCTAGCGCAACACCATGGGCCTGATCTAATGCTACTCCATCTCGGAAGCAGGCCGGTGCTTGTTGTCTCAACAGCTGAGGCTGCCTCCGAGATCTTCAAAACCCATGACATTGCATTCTCGGACAGACCCAAGTTTGTCTTCTTTCAGAAGGTTCTCTACAATTACAAGGACATAGTATCGGCACCTTATGGTGAGTATTGGAGGCAGATGAGAAGTGTCTGTGTCTTAAATCTTTTGAGCAACAGAAGGGTTCGTTCTTTTCGCACCGTGAGACTAGAGGAAACGATACTCATGATGAGCAACAAAGAACAGTCTTGTAGGGAGACATCTTCCTCCTCCTCATCAACATCGTCGGTTTTAAATTTAAGCGATATGTTTATGAAGCTTACTAATGTTGTCATTTGTAGAGTTGCTATGGGTAGGAAGTACAGTGATCTCGGGGAAGGTCGTGGGAGGTTGTTTATGGATCTTTCTGTAGAGCTGACAGAGTTCTTCACAAGGGTCAATATTGGTGACTATATCCCATGGCTTGCTTGGTTCACCCGTGTGAATGGTTTCGACGCAAAACTAGATGATCTGGCTAAACGGATGGATGCCTTCCTTGATATGGTTACTCAAGAGCATATGGATAAATCAAACAATTTAAATGATGATGATAATGAGAACGAAAAGGATTTGGTGGATGTTTTGCTTTGGGTTCAAAAAGAAAATGCAGTTGGTTTTCCTATTGATTGTGTTAGCATAAAGGCCATCATCCTGGCACTTCTGAGGCAATTACGGCTATTAAGGAGCAAGAGAAGCAAATTAACGATTTTAGACAACATTAGTGGGATTATAAGACCTTCAAGATTGACGTTGTTATTGGGTCCACCGAGCTCCGGCAAGATGACGCTACTATTGGCTCTCGCCGGACGCCTTGGAACTGGTCTTCAGATGTCAGGTAGCACAACATACAATGGCCATGGCTTAAACGAGTTTGTGCTGCAGAGGACGTCGGCTTATGTCAGTCAACAGGACTGGTTTGCGGTGGAGATGACTGTAAGGGAGACTCTTGACTTTGCAGGACGGTGTCAAGGTGTTGGATTCAAATATGATATGCTAGTAGAACTAGCAAGAAGAGAAAAGATTGCGGGGATAAAACCCGATGGTGATCTTGATATATTCATGAAGTCATTAGCTCTTGGAGAGAAAGAGACAAGCCTTGTGGTAGAGTACATCATGAAGATTTTAGGGTTGGACATATGCGCTGAGACAGGATATTCTTTTGAGTTTTCTGATGCAAGCTTTCTCTGTCTTAGACACAATGGGATTCTTATAAAAGGGATTTTGGGGTTGCAGGTGATGATTTATAGTCTAATAACACGAGGAACAATTGAAGAAAGAATGATGCAACTGACTAAGAAGAAAATGGTATTGGAACATTTAGTTGTTGGAAGGTTAAAGGCTCGAAACATCAACCAGGAAGAGCTAGATGATATCATTCGATACGGATCAAAGGAGTTATTTGCTGATGAAAATGATGAAGCGGGAAAATCCCGTCAAATTCATTATGATGATGCTGCGATAGAGAGATTACTTGATCGTGAACAAGCTGGGGATGATGACACTCCGTTGGAGGAAGGAGATGAAGATGGATTTTTAAAGGCCTTTAAGTTGTTTTCTCTTGCATAA

Protein Analysis

634

Amino Acids

71.82

Weight (kDa)

6.13

Isoelectric Point (pI)

41.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 53 - 313 1.8e-25 Cytochrome P450
ABC_tran PF00005 350 - 475 4.4e-06 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000061)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G48270 AT3G48280 AT3G48290 AT3G48290 AT3G48300 AT3G48300 AT3G48310 AT3G48320 AT4G20235 AT4G20235
fragaria_vesca FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g36190 FvH4_3g14160 FvH4_3g14210 FvH4_3g14260 FvH4_3g14260 FvH4_3g21100 FvH4_3g21380 FvH4_4g24460 FvH4_4g24500 FvH4_5g06571 FvH4_5g06571 FvH4_5g06571 FvH4_5g06571 FvH4_5g06572 FvH4_5g06573 FvH4_5g06574 FvH4_5g06575 FvH4_5g06576 FvH4_5g06577 FvH4_5g06577 FvH4_5g07540 FvH4_5g07550 FvH4_5g07560 FvH4_5g07570 FvH4_5g29491 FvH4_5g29492 FvH4_6g23870 FvH4_6g23880 FvH4_6g26870 FvH4_7g11861 FvH4_7g11862 FvH4_7g13050 FvH4_7g13060 FvH4_7g13080 FvH4_7g13080 FvH4_7g22630 FvH4_7g22650 FvH4_7g22651 FvH4_7g23020
malus_domestica MD03G1207400.v1.1 MD03G1214800.v1.1 MD03G1218500.v1.1 MD06G1163100.v1.1 MD06G1163300.v1.1 MD06G1163400.v1.1 MD06G1163500.v1.1 MD06G1163600.v1.1 MD06G1163800.v1.1 MD06G1164000.v1.1 MD06G1164100.v1.1 MD06G1224400.v1.1 MD08G1222800.v1.1 MD08G1222900.v1.1 MD08G1223100.v1.1 MD11G1091500.v1.1 MD11G1091800.v1.1 MD14G1163200.v1.1 MD14G1169000.v1.1 MD15G1207200.v1.1 MD15G1207300.v1.1 MD17G1259400.v1.1
prunus_persica Prupe.4G198100_v2.0.a1 Prupe.4G199100_v2.0.a1 Prupe.4G199400_v2.0.a1 Prupe.4G199800_v2.0.a1 Prupe.4G225200_v2.0.a1 Prupe.4G239100_v2.0.a1 Prupe.5G156600_v2.0.a1 Prupe.5G163500_v2.0.a1 Prupe.7G209500_v2.0.a1 Prupe.I003400_v2.0.a1
pyrus_communis pycom03g16340 pycom06g14600 pycom06g14610 pycom06g14620 pycom06g14630 pycom06g14640 pycom06g14670 pycom06g14690 pycom08g19390 pycom08g19400 pycom08g19410 pycom11g07600 pycom11g07610 pycom11g07620 pycom11g07660 pycom14g13580 pycom14g14080 pycom14g14100 pycom14g14110 pycom15g18380 pycom17g26080
rosa_chinensis RchiOBHm_Chr1g0339441 RchiOBHm_Chr1g0339451 RchiOBHm_Chr1g0352191 RchiOBHm_Chr1g0368221 RchiOBHm_Chr2g0129531 RchiOBHm_Chr2g0129541 RchiOBHm_Chr3g0477631 RchiOBHm_Chr3g0482551 RchiOBHm_Chr3g0482561 RchiOBHm_Chr3g0482571 RchiOBHm_Chr4g0411601 RchiOBHm_Chr4g0422181 RchiOBHm_Chr5g0036661 RchiOBHm_Chr5g0036731 RchiOBHm_Chr6g0274021 RchiOBHm_Chr7g0190921 RchiOBHm_Chr7g0190931 RchiOBHm_Chr7g0190941 RchiOBHm_Chr7g0190951 RchiOBHm_Chr7g0190961 RchiOBHm_Chr7g0190971 RchiOBHm_Chr7g0191001 RchiOBHm_Chr7g0191011 RchiOBHm_Chr7g0191021 RchiOBHm_Chr7g0192181 RchiOBHm_Chr7g0192191 RchiOBHm_Chr7g0192201 RchiOBHm_Chr7g0192221 RchiOBHm_Chr7g0192231 RchiOBHm_Chr7g0192281 RchiOBHm_Chr7g0197311
rosa_laevigata RLG00000003942 RLG00000004345 RLG00000004379 RLG00000004383 RLG00000004384 RLG00000004385 RLG00000004387 RLG00000004388 RLG00000004389 RLG00000004480 RLG00000004481 RLG00000004482 RLG00000004483 RLG00000004485 RLG00000008342 RLG00000008401 RLG00000013583 RLG00000017044 RLG00000027229 RLG00000028349 RLG00000028350 RLG00000028353 RLG00000028820 RLG00000033707 RLG00000033710
rosa_multiflora Rmu_co8020340.1_g000001 Rmu_co8096640.1_g000001 Rmu_co8214930.1_g000001 Rmu_co8223272.1_g000001 Rmu_co8282535.1_g000001 Rmu_co8343567.1_g000001 Rmu_co8404191.1_g000001 Rmu_co8455157.1_g000001 Rmu_sc0000062.1_g000028 Rmu_sc0000082.1_g000091 Rmu_sc0000509.1_g000017 Rmu_sc0000775.1_g000001 Rmu_sc0000999.1_g000034 Rmu_sc0001559.1_g000004 Rmu_sc0001559.1_g000009 Rmu_sc0002164.1_g000001 Rmu_sc0002164.1_g000005 Rmu_sc0002164.1_g000007 Rmu_sc0002164.1_g000008 Rmu_sc0002164.1_g000009 Rmu_sc0002164.1_g000019 Rmu_sc0002247.1_g000009 Rmu_sc0002373.1_g000002 Rmu_sc0002373.1_g000003 Rmu_sc0002944.1_g000059 Rmu_sc0003930.1_g000004 Rmu_sc0004958.1_g000001 Rmu_sc0005197.1_g000014 Rmu_sc0005898.1_g000008 Rmu_sc0005898.1_g000009 Rmu_sc0005898.1_g000015 Rmu_sc0006059.1_g000004 Rmu_sc0006059.1_g000010 Rmu_sc0006903.1_g000007 Rmu_sc0006903.1_g000008 Rmu_sc0006968.1_g000001 Rmu_sc0011009.1_g000009 Rmu_sc0022852.1_g000002 Rmu_sc0033854.1_g000001 Rmu_ssc0000421.1_g000057 Rmu_ssc0000421.1_g000067 Rmu_ssc0000421.1_g000069 Rmu_ssc0000421.1_g000072 Rmu_ssc0000421.1_g000081 Rmu_ssc0000421.1_g000086
rosa_roxburghii Rroxscaffold_158G00443680 Rroxscaffold_158G00443710 Rroxscaffold_158G00443720 Rroxscaffold_158G00443740 Rroxscaffold_1G00034950 Rroxscaffold_1G00044240 Rroxscaffold_1G00044270 Rroxscaffold_3G00241380 Rroxscaffold_3G00247000 Rroxscaffold_3G00263120 Rroxscaffold_3G00263150 Rroxscaffold_3G00263160 Rroxscaffold_3G00263170 Rroxscaffold_3G00263180 Rroxscaffold_3G00263190 Rroxscaffold_3G00263210 Rroxscaffold_3G00263230 Rroxscaffold_3G00263260 Rroxscaffold_3G00264110 Rroxscaffold_3G00264130 Rroxscaffold_3G00264160 Rroxscaffold_3G00264180 Rroxscaffold_3G00264200 Rroxscaffold_4G00288750 Rroxscaffold_4G00303110 Rroxscaffold_4G00303120 Rroxscaffold_4G00322280 Rroxscaffold_5G00356200 Rroxscaffold_6G00399150 Rroxscaffold_6G00399290 Rroxscaffold_7G00194770
rosa_rugosa Rorug01G0225300 Rorug01G0225400 Rorug01G0225800 Rorug01G0226000 Rorug01G0339400 Rorug01G0451500 Rorug03G0196900 Rorug03G0294900 Rorug04G0107500 Rorug04G0107600 Rorug04G0129700 Rorug04G0178000 Rorug05G0144900.1 Rorug05G0145000 Rorug05G0228000 Rorug05G0228600 Rorug06G0078300 Rorug06G0508000 Rorug06G0508100 Rorug06G0508100 Rorug06G0508400 Rorug06G0513400 Rorug07G0000100 Rorug07G0000200 Rorug07G0000300 Rorug07G0000500 Rorug07G0000800
rosa_samantha Rh1BG060400 Rh1BG210300 Rh1BG210700 Rh1BG210800 Rh1BG309800 Rh1CG223800 Rh1CG224200 Rh1CG325200 Rh1DG237000 Rh1DG237400 Rh1DG341600 Rh2DG365700 Rh3AG212500 Rh3AG248400 Rh3CG239800 Rh3DG239300 Rh4AG169300 Rh4BG166200 Rh4BG240500 Rh4BG240600 Rh4DG163600 Rh5AG249600 Rh5AG249900 Rh5AG250000 Rh5CG283100 Rh5CG283200 Rh5CG283400 Rh5DG259200 Rh5DG259800 Rh6BG197700 Rh6CG197800 Rh6DG189400 Rh7AG114900 Rh7AG115000 Rh7AG115200 Rh7AG115300 Rh7AG115400 Rh7AG115500 Rh7AG123900 Rh7AG124100 Rh7AG124300 Rh7BG117200 Rh7BG117400 Rh7BG118400 Rh7BG125400 Rh7BG125600 Rh7BG125700 Rh7BG125800 Rh7BG125900 Rh7BG126000 Rh7BG126400 Rh7BG126600 Rh7BG126700 Rh7BG166200 Rh7DG118600 Rh7DG118700 Rh7DG118900 Rh7DG119000 Rh7DG119100 Rh7DG127400 Rh7DG127600 Rh7DG127700 Rh7DG127900 Rh7DG128200
rosa_wichuraiana Rw1G013270 Rw1G020790 Rw2G027890 Rw2G028040 Rw3G019240 Rw4G014070 Rw4G020540 Rw5G021320 Rw5G022970 Rw6G016920 Rw7G010020 Rw7G010040 Rw7G010580 Rw7G010590 Rw7G010600 Rw7G010610 Rw7G010620 Rw7G010630 Rw7G010640 Rw7G010690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1070, 1550
AarI CACCTGC 1 cut(s) 1561
AatII GACGTC 1 cut(s) 1229
Acc36I ACCTGC 1 cut(s) 1561
AccB1I GGYRCC 1 cut(s) 415
AccBSI CCGCTC 1 cut(s) 222
AciI CCGC 4 cut(s) 220, 1259, 1364, 1760
AclWI GGATC 2 cut(s) 708, 1732
AcoI YGGCCR 1 cut(s) 1192
AcsI RAATTY 3 cut(s) 18, 595, 1776
AcuI CTGAAG 1 cut(s) 1148
AcyI GRCGYC 2 cut(s) 1147, 1226
AfaI GTAC 4 cut(s) 81, 156, 662, 1448
AfiI CCNNNNNNNGG 3 cut(s) 185, 841, 1112
AgsI TTSAA 6 cut(s) 230, 331, 935, 1080, 1321, 1610
AjnI CCWGG 2 cut(s) 990, 1692
AjuI GAANNNNNNNTTGG 6 cut(s) 356, 388, 933, 965, 1631, 1663
AleI CACNNNNGTG 1 cut(s) 779
AluBI AGCT 9 cut(s) 175, 308, 619, 715, 1110, 1412, 1518, 1702, 1826
AluI AGCT 9 cut(s) 175, 308, 619, 715, 1110, 1412, 1518, 1702, 1826
Alw21I GWGCWC 1 cut(s) 1112
Alw26I GTCTC 6 cut(s) 304, 499, 551, 1274, 1421, 1478
AlwI GGATC 2 cut(s) 708, 1732
Ama87I CYCGRG 1 cut(s) 671
AoxI GGCC 5 cut(s) 251, 284, 981, 1192, 1878
ApeKI GCWGC 3 cut(s) 314, 1216, 1793
ApoI RAATTY 3 cut(s) 18, 595, 1776
Asp700I GAANNNNTTC 1 cut(s) 788
AspLEI GCGC 2 cut(s) 241, 1481
AspS9I GGNCC 2 cut(s) 251, 1100
AsuHPI GGTGA 6 cut(s) 209, 437, 758, 766, 1394, 1585
AvaI CYCGRG 1 cut(s) 671
AvaII GGWCC 1 cut(s) 1100
BalI TGGCCA 1 cut(s) 1194
BanI GGYRCC 1 cut(s) 415
BanII GRGCYC 1 cut(s) 1112
BarI GAAGNNNNNNTAC 2 cut(s) 374, 406
BauI CACGAG 1 cut(s) 1596
BbsI GAAGAC 3 cut(s) 114, 364, 1154
Bbv12I GWGCWC 1 cut(s) 1112
BbvCI CCTCAGC 1 cut(s) 309
BbvI GCAGC 3 cut(s) 301, 1203, 1780
BccI CCATC 7 cut(s) 111, 169, 279, 817, 992, 1373, 1859
BceAI ACGGC 1 cut(s) 1028
BciT130I CCWGG 2 cut(s) 992, 1694
BcoDI GTCTC 6 cut(s) 304, 499, 551, 1274, 1421, 1478
BfaI CTAG 7 cut(s) 203, 236, 509, 803, 1334, 1343, 1703
BfmI CTRYAG 2 cut(s) 708, 1217
BfuAI ACCTGC 1 cut(s) 1561
BglII AGATCT 1 cut(s) 324
BisI GCNGC 3 cut(s) 315, 1217, 1794
BlsI GCNGC 3 cut(s) 316, 1218, 1795
Bme1390I CCNGG 2 cut(s) 992, 1694
Bme18I GGWCC 1 cut(s) 1100
BmeT110I CYCGRG 1 cut(s) 671
BmgT120I GGNCC 2 cut(s) 251, 1100
BmiI GGNNCC 2 cut(s) 417, 1101
BmrFI CCNGG 2 cut(s) 992, 1694
BmsI GCATC 4 cut(s) 817, 1501, 1611, 1780
BpiI GAAGAC 3 cut(s) 114, 364, 1154
BplI GAGNNNNNCTC 2 cut(s) 302, 334
Bpu10I CCTNAGC 1 cut(s) 309
BpuEI CTTGAG 1 cut(s) 834
BsaBI GATNNNNATC 2 cut(s) 1383, 1723
BsaHI GRCGYC 2 cut(s) 1147, 1226
BsaJI CCNNGG 4 cut(s) 247, 758, 1150, 1195
Bsc4I CCNNNNNNNGG 3 cut(s) 185, 841, 1112
Bse118I RCCGGY 2 cut(s) 198, 286
Bse1I ACTGG 2 cut(s) 1162, 1256
Bse3DI GCAATG 1 cut(s) 342
Bse8I GATNNNNATC 2 cut(s) 1383, 1723
BseBI CCWGG 2 cut(s) 992, 1694
BseDI CCNNGG 4 cut(s) 247, 758, 1150, 1195
BseGI GGATG 5 cut(s) 828, 832, 922, 987, 1837
BseJI GATNNNNATC 2 cut(s) 1383, 1723
BseLI CCNNNNNNNGG 3 cut(s) 185, 841, 1112
BseMI GCAATG 1 cut(s) 342
BseMII CTCAG 3 cut(s) 300, 992, 1473
BseNI ACTGG 2 cut(s) 1162, 1256
BseRI GAGGAG 3 cut(s) 117, 559, 562
BseXI GCAGC 3 cut(s) 301, 1203, 1780
BseYI CCCAGC 1 cut(s) 1826
BshFI GGCC 5 cut(s) 253, 286, 983, 1194, 1880
BshNI GGYRCC 1 cut(s) 415
BsiHKAI GWGCWC 1 cut(s) 1112
BsiHKCI CYCGRG 1 cut(s) 671
BsiSI CCGG 4 cut(s) 199, 287, 1113, 1143
BslI CCNNNNNNNGG 3 cut(s) 185, 841, 1112
BsmAI GTCTC 6 cut(s) 304, 499, 551, 1274, 1421, 1478
BsmI GAATGC 1 cut(s) 347
BsnI GGCC 5 cut(s) 253, 286, 983, 1194, 1880
BsoBI CYCGRG 1 cut(s) 671
Bsp1286I GDGCHC 1 cut(s) 1112
Bsp143I GATC 9 cut(s) 183, 256, 324, 667, 700, 808, 1384, 1724, 1813
Bsp19I CCATGG 3 cut(s) 247, 758, 1195
BspACI CCGC 4 cut(s) 220, 1259, 1364, 1760
BspANI GGCC 5 cut(s) 253, 286, 983, 1194, 1880
BspCNI CTCAG 3 cut(s) 301, 993, 1474
BspHI TCATGA 3 cut(s) 525, 1398, 1452
BspLI GGNNCC 2 cut(s) 417, 1101
BspMAI CTGCAG 1 cut(s) 1221
BspMI ACCTGC 1 cut(s) 1561
BspPI GGATC 2 cut(s) 708, 1732
BspQI GCTCTTC 1 cut(s) 1692
BspT107I GGYRCC 1 cut(s) 415
BsrBI CCGCTC 1 cut(s) 222
BsrDI GCAATG 1 cut(s) 342
BsrFI RCCGGY 2 cut(s) 198, 286
BsrI ACTGG 2 cut(s) 1162, 1256
BssAI RCCGGY 2 cut(s) 198, 286
BssECI CCNNGG 4 cut(s) 247, 758, 1150, 1195
BssMI GATC 9 cut(s) 183, 256, 324, 667, 700, 808, 1384, 1724, 1813
BssNI GRCGYC 2 cut(s) 1147, 1226
BssSI CACGAG 1 cut(s) 1596
BssT1I CCWWGG 4 cut(s) 247, 758, 1150, 1195
Bst2BI CACGAG 1 cut(s) 1596
Bst2UI CCWGG 2 cut(s) 992, 1694
Bst4CI ACNGT 5 cut(s) 502, 546, 665, 1273, 1302
Bst6I CTCTTC 3 cut(s) 231, 1345, 1692
BstACI GRCGYC 2 cut(s) 1147, 1226
BstC8I GCNNGC 3 cut(s) 284, 765, 1516
BstDEI CTNAG 5 cut(s) 309, 1001, 1482, 1529, 1632
BstDSI CCRYGG 3 cut(s) 247, 758, 1195
BstF5I GGATG 5 cut(s) 828, 832, 922, 987, 1837
BstHHI GCGC 2 cut(s) 241, 1481
BstKTI GATC 9 cut(s) 186, 259, 327, 670, 703, 811, 1387, 1727, 1816
BstMAI GTCTC 6 cut(s) 304, 499, 551, 1274, 1421, 1478
BstMBI GATC 9 cut(s) 183, 256, 324, 667, 700, 808, 1384, 1724, 1813
BstMWI GCNNNNNNNGC 3 cut(s) 314, 1012, 1032
BstNI CCWGG 2 cut(s) 992, 1694
BstSCI CCNGG 2 cut(s) 990, 1692
BstSFI CTRYAG 2 cut(s) 708, 1217
BstV1I GCAGC 3 cut(s) 301, 1203, 1780
BstV2I GAAGAC 3 cut(s) 114, 364, 1154
BstX2I RGATCY 2 cut(s) 324, 700
BstXI CCANNNNNNTGG 1 cut(s) 991
BstYI RGATCY 2 cut(s) 324, 700
BsuRI GGCC 5 cut(s) 253, 286, 983, 1194, 1880
BtgI CCRYGG 3 cut(s) 247, 758, 1195
BtsCI GGATG 5 cut(s) 828, 832, 922, 987, 1837
BtsIMutI CAGTG 1 cut(s) 670
BveI ACCTGC 1 cut(s) 1561
Cac8I GCNNGC 3 cut(s) 284, 765, 1516
CciI TCATGA 3 cut(s) 525, 1398, 1452
CfoI GCGC 2 cut(s) 241, 1481
Cfr10I RCCGGY 2 cut(s) 198, 286
Cfr13I GGNCC 2 cut(s) 251, 1100
CseI GACGC 3 cut(s) 803, 1132, 1155
Csp6I GTAC 4 cut(s) 80, 155, 661, 1447
CspCI CAANNNNNGTGG 4 cut(s) 1042, 1077, 1419, 1454
CviAII CATG 7 cut(s) 248, 338, 526, 759, 1196, 1399, 1453
CviQI GTAC 4 cut(s) 80, 155, 661, 1447
DdeI CTNAG 5 cut(s) 309, 1001, 1482, 1529, 1632
DpnI GATC 9 cut(s) 185, 258, 326, 669, 702, 810, 1386, 1726, 1815
DpnII GATC 9 cut(s) 183, 256, 324, 667, 700, 808, 1384, 1724, 1813
DraI TTTAAA 3 cut(s) 594, 879, 1875
EaeI YGGCCR 1 cut(s) 1192
Eam1104I CTCTTC 3 cut(s) 231, 1345, 1692
EarI CTCTTC 3 cut(s) 231, 1345, 1692
Ecl136II GAGCTC 1 cut(s) 1110
Eco130I CCWWGG 4 cut(s) 247, 758, 1150, 1195
Eco147I AGGCCT 1 cut(s) 1880
Eco24I GRGCYC 1 cut(s) 1112
Eco32I GATATC 1 cut(s) 1711
Eco47I GGWCC 1 cut(s) 1100
Eco53kI GAGCTC 1 cut(s) 1110
Eco57I CTGAAG 1 cut(s) 1148
Eco88I CYCGRG 1 cut(s) 671
EcoICRI GAGCTC 1 cut(s) 1110
EcoRII CCWGG 2 cut(s) 990, 1692
EcoRV GATATC 1 cut(s) 1711
EcoT14I CCWWGG 4 cut(s) 247, 758, 1150, 1195
EcoT38I GRGCYC 1 cut(s) 1112
ErhI CCWWGG 4 cut(s) 247, 758, 1150, 1195
FaeI CATG 7 cut(s) 251, 341, 529, 762, 1199, 1402, 1456
FalI AAGNNNNNCTT 2 cut(s) 356, 388
FatI CATG 7 cut(s) 247, 337, 525, 758, 1195, 1398, 1452
FauI CCCGC 2 cut(s) 1357, 1753
FauNDI CATATG 2 cut(s) 858, 1475
Fnu4HI GCNGC 3 cut(s) 315, 1217, 1794
FokI GGATG 5 cut(s) 835, 839, 929, 974, 1844
FriOI GRGCYC 1 cut(s) 1112
Fsp4HI GCNGC 3 cut(s) 315, 1217, 1794
FspBI CTAG 7 cut(s) 203, 236, 509, 803, 1334, 1343, 1703
GlaI GCGC 2 cut(s) 240, 1480
GluI GCNGC 3 cut(s) 315, 1217, 1794
GsaI CCCAGC 1 cut(s) 1830
HaeIII GGCC 5 cut(s) 253, 286, 983, 1194, 1880
HapII CCGG 4 cut(s) 199, 287, 1113, 1143
HgaI GACGC 3 cut(s) 803, 1132, 1155
HhaI GCGC 2 cut(s) 241, 1481
Hin1I GRCGYC 2 cut(s) 1147, 1226
Hin1II CATG 7 cut(s) 251, 341, 529, 762, 1199, 1402, 1456
Hin6I GCGC 2 cut(s) 239, 1479
HinP1I GCGC 2 cut(s) 239, 1479
HincII GTYRAC 1 cut(s) 1244
HindII GTYRAC 1 cut(s) 1244
HindIII AAGCTT 3 cut(s) 173, 617, 1516
HinfI GANTC 3 cut(s) 1282, 1317, 1543
HpaII CCGG 4 cut(s) 199, 287, 1113, 1143
HphI GGTGA 6 cut(s) 209, 437, 758, 766, 1394, 1585
Hpy166II GTNNAC 4 cut(s) 774, 1103, 1244, 1820
Hpy188I TCNGA 8 cut(s) 188, 278, 322, 355, 381, 1002, 1167, 1510
Hpy188III TCNNGA 9 cut(s) 23, 526, 851, 1080, 1286, 1388, 1399, 1453, 1817
Hpy8I GTNNAC 4 cut(s) 774, 1103, 1244, 1820
Hpy99I CGWCG 3 cut(s) 589, 797, 1231
HpyAV CCTTC 7 cut(s) 376, 474, 671, 841, 1086, 1662, 1847
HpyCH4III ACNGT 5 cut(s) 502, 546, 665, 1273, 1302
HpyCH4IV ACGT 2 cut(s) 1088, 1226
HpyCH4V TGCA 9 cut(s) 16, 347, 947, 1219, 1295, 1514, 1570, 1624, 1901
HpyF10VI GCNNNNNNNGC 3 cut(s) 314, 1012, 1032
HpyF3I CTNAG 5 cut(s) 309, 1001, 1482, 1529, 1632
HpySE526I ACGT 2 cut(s) 1088, 1226
Hsp92I GRCGYC 2 cut(s) 1147, 1226
Hsp92II CATG 7 cut(s) 251, 341, 529, 762, 1199, 1402, 1456
HspAI GCGC 2 cut(s) 239, 1479
Kzo9I GATC 9 cut(s) 183, 256, 324, 667, 700, 808, 1384, 1724, 1813
LguI GCTCTTC 1 cut(s) 1692
LmnI GCTCC 2 cut(s) 1023, 1115
Lsp1109I GCAGC 3 cut(s) 301, 1203, 1780
LweI GCATC 4 cut(s) 817, 1501, 1611, 1780
MaeI CTAG 7 cut(s) 203, 236, 509, 803, 1334, 1343, 1703
MaeII ACGT 2 cut(s) 1088, 1226
MaeIII GTNAC 3 cut(s) 207, 746, 844
MalI GATC 9 cut(s) 185, 258, 326, 669, 702, 810, 1386, 1726, 1815
MbiI CCGCTC 1 cut(s) 222
MboI GATC 9 cut(s) 183, 256, 324, 667, 700, 808, 1384, 1724, 1813
MfeI CAATTG 1 cut(s) 1605
MflI RGATCY 2 cut(s) 324, 700
MhlI GDGCHC 1 cut(s) 1112
MlsI TGGCCA 1 cut(s) 1194
MluCI AATT 8 cut(s) 18, 394, 595, 874, 1007, 1037, 1605, 1776
MluNI TGGCCA 1 cut(s) 1194
MlyI GAGTC 1 cut(s) 1276
MmeI TCCRAC 4 cut(s) 1294, 1449, 1645, 1827
Mox20I TGGCCA 1 cut(s) 1194
MroXI GAANNNNTTC 1 cut(s) 788
MscI TGGCCA 1 cut(s) 1194
MslI CAYNNNNRTG 2 cut(s) 779, 1785
Msp20I TGGCCA 1 cut(s) 1194
MspA1I CMGCKG 1 cut(s) 308
MspI CCGG 4 cut(s) 199, 287, 1113, 1143
MspR9I CCNGG 2 cut(s) 992, 1694
MunI CAATTG 1 cut(s) 1605
Mva1269I GAATGC 1 cut(s) 347
MvaI CCWGG 2 cut(s) 992, 1694
MwoI GCNNNNNNNGC 3 cut(s) 314, 1012, 1032
NcoI CCATGG 3 cut(s) 247, 758, 1195
NdeI CATATG 2 cut(s) 858, 1475
NdeII GATC 9 cut(s) 183, 256, 324, 667, 700, 808, 1384, 1724, 1813
NlaIII CATG 7 cut(s) 251, 341, 529, 762, 1199, 1402, 1456
NlaIV GGNNCC 2 cut(s) 417, 1101
NmuCI GTSAC 1 cut(s) 746
OliI CACNNNNGTG 1 cut(s) 779
PagI TCATGA 3 cut(s) 525, 1398, 1452
PaqCI CACCTGC 1 cut(s) 1561
PceI AGGCCT 1 cut(s) 1880
PciSI GCTCTTC 1 cut(s) 1692
PctI GAATGC 1 cut(s) 347
PdmI GAANNNNTTC 1 cut(s) 788
PfeI GAWTC 2 cut(s) 1317, 1543
PflFI GACNNNGTC 1 cut(s) 1302
PkrI GCNGC 3 cut(s) 316, 1218, 1795
PleI GAGTC 1 cut(s) 1276
PpsI GAGTC 1 cut(s) 1276
PsiI TTATAA 2 cut(s) 1070, 1550
Psp124BI GAGCTC 1 cut(s) 1112
Psp6I CCWGG 2 cut(s) 990, 1692
PspFI CCCAGC 1 cut(s) 1826
PspGI CCWGG 2 cut(s) 990, 1692
PspN4I GGNNCC 2 cut(s) 417, 1101
PspPI GGNCC 2 cut(s) 251, 1100
PstI CTGCAG 1 cut(s) 1221
PsuI RGATCY 2 cut(s) 324, 700
PsyI GACNNNGTC 1 cut(s) 1302
PvuII CAGCTG 1 cut(s) 308
RsaI GTAC 4 cut(s) 81, 156, 662, 1448
RsaNI GTAC 4 cut(s) 80, 155, 661, 1447
RseI CAYNNNNRTG 2 cut(s) 779, 1785
SacI GAGCTC 1 cut(s) 1112
SapI GCTCTTC 1 cut(s) 1692
SatI GCNGC 3 cut(s) 315, 1217, 1794
Sau3AI GATC 9 cut(s) 183, 256, 324, 667, 700, 808, 1384, 1724, 1813
Sau96I GGNCC 2 cut(s) 251, 1100
SchI GAGTC 1 cut(s) 1276
ScrFI CCNGG 2 cut(s) 992, 1694
SduI GDGCHC 1 cut(s) 1112
SfaNI GCATC 4 cut(s) 817, 1501, 1611, 1780
SfcI CTRYAG 2 cut(s) 708, 1217
SinI GGWCC 1 cut(s) 1100
SmiI ATTTAAAT 1 cut(s) 879
SmiMI CAYNNNNRTG 2 cut(s) 779, 1785
SmlI CTYRAG 1 cut(s) 849
SmoI CTYRAG 1 cut(s) 849
Sse9I AATT 8 cut(s) 18, 394, 595, 874, 1007, 1037, 1605, 1776
SseBI AGGCCT 1 cut(s) 1880
SsiI CCGC 4 cut(s) 220, 1259, 1364, 1760
SspI AATATT 1 cut(s) 742
SspMI CTAG 7 cut(s) 203, 236, 509, 803, 1334, 1343, 1703
SstI GAGCTC 1 cut(s) 1112
StuI AGGCCT 1 cut(s) 1880
StyD4I CCNGG 2 cut(s) 990, 1692
StyI CCWWGG 4 cut(s) 247, 758, 1150, 1195
SwaI ATTTAAAT 1 cut(s) 879
TaaI ACNGT 5 cut(s) 502, 546, 665, 1273, 1302
TaiI ACGT 2 cut(s) 1091, 1229
TaqI TCGA 3 cut(s) 792, 1681, 1717
TasI AATT 8 cut(s) 18, 394, 595, 874, 1007, 1037, 1605, 1776
TatI WGTACW 2 cut(s) 660, 1446
TfiI GAWTC 2 cut(s) 1317, 1543
TscAI CASTG 1 cut(s) 670
TseFI GTSAC 1 cut(s) 746
TseI GCWGC 3 cut(s) 314, 1216, 1793
Tsp45I GTSAC 1 cut(s) 746
TspDTI ATGAA 8 cut(s) 629, 1387, 1415, 1469, 1761, 1769, 1770, 1875
TspGWI ACGGA 3 cut(s) 835, 1737, 1833
TspRI CASTG 1 cut(s) 670
Tth111I GACNNNGTC 1 cut(s) 1302
VpaK11BI GGWCC 1 cut(s) 1100
XapI RAATTY 3 cut(s) 18, 595, 1776
XcmI CCANNNNNNNNNTGG 1 cut(s) 765
XmnI GAANNNNTTC 1 cut(s) 788
XspI CTAG 7 cut(s) 203, 236, 509, 803, 1334, 1343, 1703
ZraI GACGTC 1 cut(s) 1227
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.