Rroxscaffold_3G00263230

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
Physical Location & Seq
Reverse (-)
57200944 .. 57202918
1975 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00263230.1

Sequence Viewer

Length: 1260 bp
ATGAAACCTTCTCCCCTAGCGCTTGTTGCCATTTTCCTCATTCTCGTATACAGATGGTCTTTCACTACTCCTTCAAAGAACTCACCACCTTCTCCACCAAAGCTCCCTATTATTGGTAACCTTCACCAACTAGGGTTACAACCCCATCGCTCACTTGAAGCCCTGTCTCAACGCCATGGCCCTCTCATGCTCCTCCATTTCGGAAGAGTCCCCGTTCTTGTTGTCTCGTCTTCCGAGGCTGCAAGTGAGATTATGAGAATCCATGACCTCAATTTCTCCAACAGACCCAAGTCGGTCATCTTCGAGAAGCTTCTCTACAACTACAAAGATGTGGCATCGGCACCTTATGGCGAGTATTGGAGGCAGGTGAAGAGTATATGCGTTATCAACCTTCTGAGCAACAAGAAGGTTCGGTCTTTTCGCGCTGTGAGAGAAGATGAAACCAAGTCCATGATCAACGAGATAACGAAACATTCGTCGTCTTCAAGAGTCGTGAATTTAAGCGAAATGTTTGCGACACTCACTAATGGTGTCATTTGCAGAGTGGCTCTGGGGAGGAAGTACAGTAGCACTGATTGCGTTGAAGGTGGTCAGACCTTTAAGGAGCTTCTGCTGGAATTTGTAAATTTACTGGGAATATTCAGTATCGGGGACTTTATTCCATGGCTTGCTTGGTTGAACCGTGTAAATGGTTTGAATGCTAAGTTAGATAGAGTGGCTAAACAGTTTGATGACTTTTTGGATAGAGTGATTCAAGATCATAAAGATGATCGTTCAAGGAGCGGAAAGGATGGCCATTCACAGATTGACAACGACAACCAAAACGATTTTGTGGACGTTTTGCTCGAGATTCAAAAGGAGAACTCGCTTGGTTTTCCTCTTGACATAATTAGCATTAAGGCTCTCATCTTGGATGTGTTTGCTGCTGGATCTGATACCACATATACAGTTCTAGAGTGGGCAATGACGGAGCTTTTAAGGCATCCAAGTATCATGAGCAAACTGCAAAATGAGGTACGAGGAATAGTCGGAAACAAATCACACATAACTGAGAATGATTTGGTTGATATGCGCTACTTGAAGGCAGTGATCAAGGAGACTCTTCGCGTACACCCTCCAATTCCATTATTAGTACCCAGAAAATCCACCCAAGATGTGAAAATAAATGGTTATGACATCAAAGCCAACACACAAGTTATAGTCAATGCATGGCAAATTGGAAGAGATTCTAAGTCATATCACAATCCGGAGGGAGTATGA

Protein Analysis

419

Amino Acids

47.32

Weight (kDa)

9.02

Isoelectric Point (pI)

34.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 29 - 417 2.6e-84 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000061)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G48270 AT3G48280 AT3G48290 AT3G48290 AT3G48300 AT3G48300 AT3G48310 AT3G48320 AT4G20235 AT4G20235
fragaria_vesca FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g36190 FvH4_3g14160 FvH4_3g14210 FvH4_3g14260 FvH4_3g14260 FvH4_3g21100 FvH4_3g21380 FvH4_4g24460 FvH4_4g24500 FvH4_5g06571 FvH4_5g06571 FvH4_5g06571 FvH4_5g06571 FvH4_5g06572 FvH4_5g06573 FvH4_5g06574 FvH4_5g06575 FvH4_5g06576 FvH4_5g06577 FvH4_5g06577 FvH4_5g07540 FvH4_5g07550 FvH4_5g07560 FvH4_5g07570 FvH4_5g29491 FvH4_5g29492 FvH4_6g23870 FvH4_6g23880 FvH4_6g26870 FvH4_7g11861 FvH4_7g11862 FvH4_7g13050 FvH4_7g13060 FvH4_7g13080 FvH4_7g13080 FvH4_7g22630 FvH4_7g22650 FvH4_7g22651 FvH4_7g23020
malus_domestica MD03G1207400.v1.1 MD03G1214800.v1.1 MD03G1218500.v1.1 MD06G1163100.v1.1 MD06G1163300.v1.1 MD06G1163400.v1.1 MD06G1163500.v1.1 MD06G1163600.v1.1 MD06G1163800.v1.1 MD06G1164000.v1.1 MD06G1164100.v1.1 MD06G1224400.v1.1 MD08G1222800.v1.1 MD08G1222900.v1.1 MD08G1223100.v1.1 MD11G1091500.v1.1 MD11G1091800.v1.1 MD14G1163200.v1.1 MD14G1169000.v1.1 MD15G1207200.v1.1 MD15G1207300.v1.1 MD17G1259400.v1.1
prunus_persica Prupe.4G198100_v2.0.a1 Prupe.4G199100_v2.0.a1 Prupe.4G199400_v2.0.a1 Prupe.4G199800_v2.0.a1 Prupe.4G225200_v2.0.a1 Prupe.4G239100_v2.0.a1 Prupe.5G156600_v2.0.a1 Prupe.5G163500_v2.0.a1 Prupe.7G209500_v2.0.a1 Prupe.I003400_v2.0.a1
pyrus_communis pycom03g16340 pycom06g14600 pycom06g14610 pycom06g14620 pycom06g14630 pycom06g14640 pycom06g14670 pycom06g14690 pycom08g19390 pycom08g19400 pycom08g19410 pycom11g07600 pycom11g07610 pycom11g07620 pycom11g07660 pycom14g13580 pycom14g14080 pycom14g14100 pycom14g14110 pycom15g18380 pycom17g26080
rosa_chinensis RchiOBHm_Chr1g0339441 RchiOBHm_Chr1g0339451 RchiOBHm_Chr1g0352191 RchiOBHm_Chr1g0368221 RchiOBHm_Chr2g0129531 RchiOBHm_Chr2g0129541 RchiOBHm_Chr3g0477631 RchiOBHm_Chr3g0482551 RchiOBHm_Chr3g0482561 RchiOBHm_Chr3g0482571 RchiOBHm_Chr4g0411601 RchiOBHm_Chr4g0422181 RchiOBHm_Chr5g0036661 RchiOBHm_Chr5g0036731 RchiOBHm_Chr6g0274021 RchiOBHm_Chr7g0190921 RchiOBHm_Chr7g0190931 RchiOBHm_Chr7g0190941 RchiOBHm_Chr7g0190951 RchiOBHm_Chr7g0190961 RchiOBHm_Chr7g0190971 RchiOBHm_Chr7g0191001 RchiOBHm_Chr7g0191011 RchiOBHm_Chr7g0191021 RchiOBHm_Chr7g0192181 RchiOBHm_Chr7g0192191 RchiOBHm_Chr7g0192201 RchiOBHm_Chr7g0192221 RchiOBHm_Chr7g0192231 RchiOBHm_Chr7g0192281 RchiOBHm_Chr7g0197311
rosa_laevigata RLG00000003942 RLG00000004345 RLG00000004379 RLG00000004383 RLG00000004384 RLG00000004385 RLG00000004387 RLG00000004388 RLG00000004389 RLG00000004480 RLG00000004481 RLG00000004482 RLG00000004483 RLG00000004485 RLG00000008342 RLG00000008401 RLG00000013583 RLG00000017044 RLG00000027229 RLG00000028349 RLG00000028350 RLG00000028353 RLG00000028820 RLG00000033707 RLG00000033710
rosa_multiflora Rmu_co8020340.1_g000001 Rmu_co8096640.1_g000001 Rmu_co8214930.1_g000001 Rmu_co8223272.1_g000001 Rmu_co8282535.1_g000001 Rmu_co8343567.1_g000001 Rmu_co8404191.1_g000001 Rmu_co8455157.1_g000001 Rmu_sc0000062.1_g000028 Rmu_sc0000082.1_g000091 Rmu_sc0000509.1_g000017 Rmu_sc0000775.1_g000001 Rmu_sc0000999.1_g000034 Rmu_sc0001559.1_g000004 Rmu_sc0001559.1_g000009 Rmu_sc0002164.1_g000001 Rmu_sc0002164.1_g000005 Rmu_sc0002164.1_g000007 Rmu_sc0002164.1_g000008 Rmu_sc0002164.1_g000009 Rmu_sc0002164.1_g000019 Rmu_sc0002247.1_g000009 Rmu_sc0002373.1_g000002 Rmu_sc0002373.1_g000003 Rmu_sc0002944.1_g000059 Rmu_sc0003930.1_g000004 Rmu_sc0004958.1_g000001 Rmu_sc0005197.1_g000014 Rmu_sc0005898.1_g000008 Rmu_sc0005898.1_g000009 Rmu_sc0005898.1_g000015 Rmu_sc0006059.1_g000004 Rmu_sc0006059.1_g000010 Rmu_sc0006903.1_g000007 Rmu_sc0006903.1_g000008 Rmu_sc0006968.1_g000001 Rmu_sc0011009.1_g000009 Rmu_sc0022852.1_g000002 Rmu_sc0033854.1_g000001 Rmu_ssc0000421.1_g000057 Rmu_ssc0000421.1_g000067 Rmu_ssc0000421.1_g000069 Rmu_ssc0000421.1_g000072 Rmu_ssc0000421.1_g000081 Rmu_ssc0000421.1_g000086
rosa_roxburghii Rroxscaffold_158G00443680 Rroxscaffold_158G00443710 Rroxscaffold_158G00443720 Rroxscaffold_158G00443740 Rroxscaffold_1G00034950 Rroxscaffold_1G00044240 Rroxscaffold_1G00044270 Rroxscaffold_3G00241380 Rroxscaffold_3G00247000 Rroxscaffold_3G00263120 Rroxscaffold_3G00263150 Rroxscaffold_3G00263160 Rroxscaffold_3G00263170 Rroxscaffold_3G00263180 Rroxscaffold_3G00263190 Rroxscaffold_3G00263210 Rroxscaffold_3G00263230 Rroxscaffold_3G00263260 Rroxscaffold_3G00264110 Rroxscaffold_3G00264130 Rroxscaffold_3G00264160 Rroxscaffold_3G00264180 Rroxscaffold_3G00264200 Rroxscaffold_4G00288750 Rroxscaffold_4G00303110 Rroxscaffold_4G00303120 Rroxscaffold_4G00322280 Rroxscaffold_5G00356200 Rroxscaffold_6G00399150 Rroxscaffold_6G00399290 Rroxscaffold_7G00194770
rosa_rugosa Rorug01G0225300 Rorug01G0225400 Rorug01G0225800 Rorug01G0226000 Rorug01G0339400 Rorug01G0451500 Rorug03G0196900 Rorug03G0294900 Rorug04G0107500 Rorug04G0107600 Rorug04G0129700 Rorug04G0178000 Rorug05G0144900.1 Rorug05G0145000 Rorug05G0228000 Rorug05G0228600 Rorug06G0078300 Rorug06G0508000 Rorug06G0508100 Rorug06G0508100 Rorug06G0508400 Rorug06G0513400 Rorug07G0000100 Rorug07G0000200 Rorug07G0000300 Rorug07G0000500 Rorug07G0000800
rosa_samantha Rh1BG060400 Rh1BG210300 Rh1BG210700 Rh1BG210800 Rh1BG309800 Rh1CG223800 Rh1CG224200 Rh1CG325200 Rh1DG237000 Rh1DG237400 Rh1DG341600 Rh2DG365700 Rh3AG212500 Rh3AG248400 Rh3CG239800 Rh3DG239300 Rh4AG169300 Rh4BG166200 Rh4BG240500 Rh4BG240600 Rh4DG163600 Rh5AG249600 Rh5AG249900 Rh5AG250000 Rh5CG283100 Rh5CG283200 Rh5CG283400 Rh5DG259200 Rh5DG259800 Rh6BG197700 Rh6CG197800 Rh6DG189400 Rh7AG114900 Rh7AG115000 Rh7AG115200 Rh7AG115300 Rh7AG115400 Rh7AG115500 Rh7AG123900 Rh7AG124100 Rh7AG124300 Rh7BG117200 Rh7BG117400 Rh7BG118400 Rh7BG125400 Rh7BG125600 Rh7BG125700 Rh7BG125800 Rh7BG125900 Rh7BG126000 Rh7BG126400 Rh7BG126600 Rh7BG126700 Rh7BG166200 Rh7DG118600 Rh7DG118700 Rh7DG118900 Rh7DG119000 Rh7DG119100 Rh7DG127400 Rh7DG127600 Rh7DG127700 Rh7DG127900 Rh7DG128200
rosa_wichuraiana Rw1G013270 Rw1G020790 Rw2G027890 Rw2G028040 Rw3G019240 Rw4G014070 Rw4G020540 Rw5G021320 Rw5G022970 Rw6G016920 Rw7G010020 Rw7G010040 Rw7G010580 Rw7G010590 Rw7G010600 Rw7G010610 Rw7G010620 Rw7G010630 Rw7G010640 Rw7G010690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 355
Acc36I ACCTGC 1 cut(s) 355
AccB1I GGYRCC 1 cut(s) 340
AccBSI CCGCTC 1 cut(s) 783
AccI GTMKAC 1 cut(s) 48
AccII CGCG 2 cut(s) 423, 1107
AccIII TCCGGA 1 cut(s) 1246
AciI CCGC 1 cut(s) 783
AclWI GGATC 1 cut(s) 937
AcoI YGGCCR 1 cut(s) 793
AcsI RAATTY 3 cut(s) 496, 617, 625
AfaI GTAC 4 cut(s) 563, 1017, 1110, 1134
AfeI AGCGCT 1 cut(s) 21
AfiI CCNNNNNNNGG 1 cut(s) 113
AluBI AGCT 4 cut(s) 103, 310, 607, 973
AluI AGCT 4 cut(s) 103, 310, 607, 973
Alw26I GTCTC 3 cut(s) 171, 229, 1091
AlwI GGATC 1 cut(s) 937
Ama87I CYCGRG 1 cut(s) 845
Aor13HI TCCGGA 1 cut(s) 1246
Aor51HI AGCGCT 1 cut(s) 21
AoxI GGCC 2 cut(s) 178, 793
ApeKI GCWGC 2 cut(s) 239, 923
ApoI RAATTY 3 cut(s) 496, 617, 625
ArsI GACNNNNNNTTYG 2 cut(s) 461, 493
Asp700I GAANNNNTTC 1 cut(s) 1225
AspLEI GCGC 3 cut(s) 22, 425, 1074
AspS9I GGNCC 1 cut(s) 179
AsuHPI GGTGA 3 cut(s) 75, 116, 379
AvaI CYCGRG 1 cut(s) 845
BalI TGGCCA 1 cut(s) 795
BanI GGYRCC 1 cut(s) 340
BarI GAAGNNNNNNTAC 2 cut(s) 299, 331
BbsI GAAGAC 2 cut(s) 222, 474
BbvI GCAGC 2 cut(s) 226, 910
BccI CCATC 3 cut(s) 48, 153, 785
BcgI CGANNNNNNTGC 2 cut(s) 494, 528
BclI TGATCA 2 cut(s) 453, 1089
BcoDI GTCTC 3 cut(s) 171, 229, 1091
BfaI CTAG 3 cut(s) 17, 131, 953
BfoI RGCGCY 1 cut(s) 23
BfuAI ACCTGC 1 cut(s) 355
BisI GCNGC 2 cut(s) 240, 924
BlsI GCNGC 2 cut(s) 241, 925
BmeT110I CYCGRG 1 cut(s) 845
BmgT120I GGNCC 1 cut(s) 179
BmiI GGNNCC 1 cut(s) 342
BmrI ACTGGG 1 cut(s) 641
BmsI GCATC 2 cut(s) 344, 991
BmuI ACTGGG 1 cut(s) 641
BoxI GACNNNNGTC 1 cut(s) 289
BpiI GAAGAC 2 cut(s) 222, 474
BsaJI CCNNGG 3 cut(s) 175, 234, 662
BsaWI WCCGGW 1 cut(s) 1246
BsaXI ACNNNNNCTCC 2 cut(s) 87, 117
Bsc4I CCNNNNNNNGG 1 cut(s) 113
Bse1I ACTGG 1 cut(s) 636
Bse3DI GCAATG 1 cut(s) 969
BseAI TCCGGA 1 cut(s) 1246
BseDI CCNNGG 3 cut(s) 175, 234, 662
BseGI GGATG 3 cut(s) 796, 919, 982
BseLI CCNNNNNNNGG 1 cut(s) 113
BseMI GCAATG 1 cut(s) 969
BseMII CTCAG 2 cut(s) 386, 1041
BseNI ACTGG 1 cut(s) 636
BseRI GAGGAG 1 cut(s) 182
BseXI GCAGC 2 cut(s) 226, 910
Bsh1236I CGCG 2 cut(s) 423, 1107
BshFI GGCC 2 cut(s) 180, 795
BshNI GGYRCC 1 cut(s) 340
BsiHKCI CYCGRG 1 cut(s) 845
BsiSI CCGG 1 cut(s) 1247
BslFI GGGAC 2 cut(s) 194, 665
BslI CCNNNNNNNGG 1 cut(s) 113
BsmAI GTCTC 3 cut(s) 171, 229, 1091
BsmFI GGGAC 2 cut(s) 194, 665
BsmI GAATGC 1 cut(s) 703
BsnI GGCC 2 cut(s) 180, 795
BsoBI CYCGRG 1 cut(s) 845
Bsp13I TCCGGA 1 cut(s) 1246
Bsp143I GATC 5 cut(s) 453, 757, 769, 929, 1089
Bsp19I CCATGG 2 cut(s) 175, 662
BspACI CCGC 1 cut(s) 783
BspANI GGCC 2 cut(s) 180, 795
BspCNI CTCAG 2 cut(s) 387, 1042
BspEI TCCGGA 1 cut(s) 1246
BspFNI CGCG 2 cut(s) 423, 1107
BspHI TCATGA 1 cut(s) 993
BspLI GGNNCC 1 cut(s) 342
BspMI ACCTGC 1 cut(s) 355
BspPI GGATC 1 cut(s) 937
BspT107I GGYRCC 1 cut(s) 340
BsrBI CCGCTC 1 cut(s) 783
BsrDI GCAATG 1 cut(s) 969
BsrI ACTGG 1 cut(s) 636
BssECI CCNNGG 3 cut(s) 175, 234, 662
BssMI GATC 5 cut(s) 453, 757, 769, 929, 1089
BssNAI GTATAC 1 cut(s) 49
BssT1I CCWWGG 2 cut(s) 175, 662
Bst1107I GTATAC 1 cut(s) 49
Bst4CI ACNGT 4 cut(s) 566, 683, 726, 949
Bst6I CTCTTC 4 cut(s) 199, 365, 1107, 1216
BstAPI GCANNNNNTGC 1 cut(s) 576
BstC8I GCNNGC 1 cut(s) 669
BstDEI CTNAG 4 cut(s) 395, 702, 1050, 1230
BstDSI CCRYGG 2 cut(s) 175, 662
BstEII GGTNACC 1 cut(s) 116
BstF5I GGATG 3 cut(s) 796, 919, 982
BstFNI CGCG 2 cut(s) 423, 1107
BstH2I RGCGCY 1 cut(s) 23
BstHHI GCGC 3 cut(s) 22, 425, 1074
BstKTI GATC 5 cut(s) 456, 760, 772, 932, 1092
BstMAI GTCTC 3 cut(s) 171, 229, 1091
BstMBI GATC 5 cut(s) 453, 757, 769, 929, 1089
BstMWI GCNNNNNNNGC 3 cut(s) 26, 576, 979
BstPAI GACNNNNGTC 1 cut(s) 289
BstPI GGTNACC 1 cut(s) 116
BstUI CGCG 2 cut(s) 423, 1107
BstV1I GCAGC 2 cut(s) 226, 910
BstV2I GAAGAC 2 cut(s) 222, 474
BstX2I RGATCY 1 cut(s) 929
BstYI RGATCY 1 cut(s) 929
BstZ17I GTATAC 1 cut(s) 49
BsuRI GGCC 2 cut(s) 180, 795
BtgI CCRYGG 2 cut(s) 175, 662
BtgZI GCGATG 1 cut(s) 131
BtsCI GGATG 3 cut(s) 796, 919, 982
BtsI GCAGTG 1 cut(s) 1092
BtsIMutI CAGTG 2 cut(s) 570, 1092
BveI ACCTGC 1 cut(s) 355
Cac8I GCNNGC 1 cut(s) 669
CciI TCATGA 1 cut(s) 993
CfoI GCGC 3 cut(s) 22, 425, 1074
Cfr13I GGNCC 1 cut(s) 179
Csp6I GTAC 4 cut(s) 562, 1016, 1109, 1133
CviAII CATG 7 cut(s) 176, 187, 263, 451, 663, 994, 1209
CviQI GTAC 4 cut(s) 562, 1016, 1109, 1133
DdeI CTNAG 4 cut(s) 395, 702, 1050, 1230
DpnI GATC 5 cut(s) 455, 759, 771, 931, 1091
DpnII GATC 5 cut(s) 453, 757, 769, 929, 1089
EaeI YGGCCR 1 cut(s) 793
Eam1104I CTCTTC 4 cut(s) 199, 365, 1107, 1216
EarI CTCTTC 4 cut(s) 199, 365, 1107, 1216
Eco130I CCWWGG 2 cut(s) 175, 662
Eco47III AGCGCT 1 cut(s) 21
Eco88I CYCGRG 1 cut(s) 845
Eco91I GGTNACC 1 cut(s) 116
EcoO65I GGTNACC 1 cut(s) 116
EcoT14I CCWWGG 2 cut(s) 175, 662
EcoT22I ATGCAT 1 cut(s) 1210
ErhI CCWWGG 2 cut(s) 175, 662
FaeI CATG 7 cut(s) 179, 190, 266, 454, 666, 997, 1212
FaqI GGGAC 2 cut(s) 194, 665
FatI CATG 7 cut(s) 175, 186, 262, 450, 662, 993, 1208
FbaI TGATCA 2 cut(s) 453, 1089
FblI GTMKAC 1 cut(s) 48
Fnu4HI GCNGC 2 cut(s) 240, 924
FokI GGATG 3 cut(s) 803, 926, 969
Fsp4HI GCNGC 2 cut(s) 240, 924
FspBI CTAG 3 cut(s) 17, 131, 953
GlaI GCGC 3 cut(s) 21, 424, 1073
GluI GCNGC 2 cut(s) 240, 924
HaeII RGCGCY 1 cut(s) 23
HaeIII GGCC 2 cut(s) 180, 795
HapII CCGG 1 cut(s) 1247
HhaI GCGC 3 cut(s) 22, 425, 1074
Hin1II CATG 7 cut(s) 179, 190, 266, 454, 666, 997, 1212
Hin6I GCGC 3 cut(s) 20, 423, 1072
HinP1I GCGC 3 cut(s) 20, 423, 1072
HindIII AAGCTT 1 cut(s) 308
HinfI GANTC 7 cut(s) 207, 258, 489, 751, 850, 1099, 1226
HpaII CCGG 1 cut(s) 1247
HphI GGTGA 3 cut(s) 75, 116, 379
Hpy166II GTNNAC 3 cut(s) 49, 835, 1111
Hpy188I TCNGA 6 cut(s) 203, 235, 396, 594, 934, 1031
Hpy188III TCNNGA 9 cut(s) 304, 486, 493, 755, 847, 881, 953, 994, 1247
Hpy8I GTNNAC 3 cut(s) 49, 835, 1111
Hpy99I CGWCG 1 cut(s) 481
HpyAV CCTTC 8 cut(s) 18, 81, 99, 131, 400, 401, 578, 1075
HpyCH4III ACNGT 4 cut(s) 566, 683, 726, 949
HpyCH4IV ACGT 1 cut(s) 837
HpyCH4V TGCA 4 cut(s) 242, 540, 1006, 1208
HpyF10VI GCNNNNNNNGC 3 cut(s) 26, 576, 979
HpyF3I CTNAG 4 cut(s) 395, 702, 1050, 1230
HpySE526I ACGT 1 cut(s) 837
Hsp92II CATG 7 cut(s) 179, 190, 266, 454, 666, 997, 1212
HspAI GCGC 3 cut(s) 20, 423, 1072
Kpn2I TCCGGA 1 cut(s) 1246
Ksp22I TGATCA 2 cut(s) 453, 1089
Kzo9I GATC 5 cut(s) 453, 757, 769, 929, 1089
LmnI GCTCC 5 cut(s) 108, 195, 604, 780, 970
LpnPI CCDG 7 cut(s) 176, 350, 536, 599, 617, 912, 1150
Lsp1109I GCAGC 2 cut(s) 226, 910
LweI GCATC 2 cut(s) 344, 991
MaeI CTAG 3 cut(s) 17, 131, 953
MaeII ACGT 1 cut(s) 837
MaeIII GTNAC 2 cut(s) 116, 135
MalI GATC 5 cut(s) 455, 759, 771, 931, 1091
MbiI CCGCTC 1 cut(s) 783
MboI GATC 5 cut(s) 453, 757, 769, 929, 1089
MboII GAAGA 8 cut(s) 216, 222, 292, 382, 446, 474, 1094, 1233
MflI RGATCY 1 cut(s) 929
MlsI TGGCCA 1 cut(s) 795
MluCI AATT 7 cut(s) 271, 496, 617, 625, 888, 1119, 1215
MluNI TGGCCA 1 cut(s) 795
MlyI GAGTC 3 cut(s) 216, 498, 1093
MmeI TCCRAC 2 cut(s) 303, 1009
Mox20I TGGCCA 1 cut(s) 795
Mph1103I ATGCAT 1 cut(s) 1210
MroI TCCGGA 1 cut(s) 1246
MroXI GAANNNNTTC 1 cut(s) 1225
MscI TGGCCA 1 cut(s) 795
MseI TTAA 4 cut(s) 500, 600, 897, 977
MslI CAYNNNNRTG 1 cut(s) 765
Msp20I TGGCCA 1 cut(s) 795
MspI CCGG 1 cut(s) 1247
Mva1269I GAATGC 1 cut(s) 703
MvnI CGCG 2 cut(s) 423, 1107
MwoI GCNNNNNNNGC 3 cut(s) 26, 576, 979
NcoI CCATGG 2 cut(s) 175, 662
NdeII GATC 5 cut(s) 453, 757, 769, 929, 1089
NlaIII CATG 7 cut(s) 179, 190, 266, 454, 666, 997, 1212
NlaIV GGNNCC 1 cut(s) 342
NsiI ATGCAT 1 cut(s) 1210
PaeR7I CTCGAG 1 cut(s) 845
PagI TCATGA 1 cut(s) 993
PaqCI CACCTGC 1 cut(s) 355
PcsI WCGNNNNNNNCGW 2 cut(s) 473, 843
PctI GAATGC 1 cut(s) 703
PdmI GAANNNNTTC 1 cut(s) 1225
PfeI GAWTC 4 cut(s) 258, 751, 850, 1226
PkrI GCNGC 2 cut(s) 241, 925
PleI GAGTC 3 cut(s) 215, 497, 1093
PpsI GAGTC 3 cut(s) 215, 497, 1093
PshAI GACNNNNGTC 1 cut(s) 289
PspEI GGTNACC 1 cut(s) 116
PspN4I GGNNCC 1 cut(s) 342
PspPI GGNCC 1 cut(s) 179
PsuI RGATCY 1 cut(s) 929
RsaI GTAC 4 cut(s) 563, 1017, 1110, 1134
RsaNI GTAC 4 cut(s) 562, 1016, 1109, 1133
RseI CAYNNNNRTG 1 cut(s) 765
SaqAI TTAA 4 cut(s) 500, 600, 897, 977
SatI GCNGC 2 cut(s) 240, 924
Sau3AI GATC 5 cut(s) 453, 757, 769, 929, 1089
Sau96I GGNCC 1 cut(s) 179
SchI GAGTC 3 cut(s) 216, 498, 1093
SfaNI GCATC 2 cut(s) 344, 991
Sfr274I CTCGAG 1 cut(s) 845
SlaI CTCGAG 1 cut(s) 845
SmiMI CAYNNNNRTG 1 cut(s) 765
SmlI CTYRAG 1 cut(s) 845
SmoI CTYRAG 1 cut(s) 845
Sse9I AATT 7 cut(s) 271, 496, 617, 625, 888, 1119, 1215
SsiI CCGC 1 cut(s) 783
SspI AATATT 1 cut(s) 639
SspMI CTAG 3 cut(s) 17, 131, 953
StyI CCWWGG 2 cut(s) 175, 662
TaaI ACNGT 4 cut(s) 566, 683, 726, 949
TaiI ACGT 1 cut(s) 840
TaqI TCGA 2 cut(s) 303, 846
TaqII GACCGA 2 cut(s) 283, 402
TasI AATT 7 cut(s) 271, 496, 617, 625, 888, 1119, 1215
TatI WGTACW 1 cut(s) 561
TfiI GAWTC 4 cut(s) 258, 751, 850, 1226
Tru1I TTAA 4 cut(s) 500, 600, 897, 977
Tru9I TTAA 4 cut(s) 500, 600, 897, 977
TscAI CASTG 2 cut(s) 577, 1092
TseI GCWGC 2 cut(s) 239, 923
TspDTI ATGAA 2 cut(s) 17, 453
TspGWI ACGGA 1 cut(s) 983
TspRI CASTG 2 cut(s) 577, 1092
XapI RAATTY 3 cut(s) 496, 617, 625
XbaI TCTAGA 1 cut(s) 952
XcmI CCANNNNNNNNNTGG 1 cut(s) 669
XhoI CTCGAG 1 cut(s) 845
XmiI GTMKAC 1 cut(s) 48
XmnI GAANNNNTTC 1 cut(s) 1225
XspI CTAG 3 cut(s) 17, 131, 953
Zsp2I ATGCAT 1 cut(s) 1210
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.